22-50515949-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50515949
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50515949
    reference: chr 22
allele count: 2
allele frequency: 1.714442463310931e-5
allele num: 116656
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.187-18G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.424-18G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.322-18G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.424-18G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-18G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.334-18G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.334-18G>A
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7363
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16568
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5181
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 886
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2206
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33067
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1921
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS

22-50515950-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50515950
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50515950
    reference: chr 22
allele count: 2
allele frequency: 1.715354134861142e-5
allele num: 116594
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-19C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.322-19C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.424-19C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.334-19C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.424-19C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.187-19C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.334-19C>T
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18367
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7405
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16648
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2191
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33508
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5785
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4293
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

22-50515950-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50515950
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50515950
    reference: chr 22
allele count: 2
allele frequency: 1.715354134861142e-5
allele num: 116594
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.187-19C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.334-19C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-19C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.424-19C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.424-19C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.322-19C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.334-19C>G
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16648
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18367
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7405
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1917
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 872
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1248
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6621
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

22-50515950-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50515950
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50515950
    reference: chr 22
allele count: 2
allele frequency: 1.715354134861142e-5
allele num: 116594
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.187-19C>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.322-19C>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.424-19C>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.334-19C>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.424-19C>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.334-19C>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-19C>A
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7405
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18367
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16648
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6621
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2191
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1917
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

22-50515961-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50515961
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50515961
    reference: chr 22
allele count: 8
allele frequency: 6.94661526171373e-5
allele num: 115164
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.424-30C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.424-30C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.334-30C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.334-30C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.187-30C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-30C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.322-30C>T
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14443
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11754
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8375
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3510
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12428
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 695
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3642
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10035
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

22-50515966-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50515966
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50515966
    reference: chr 22
allele count: 2
allele frequency: 1.742281692103979e-5
allele num: 114792
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.424-35G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.334-35G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.322-35G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.187-35G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.334-35G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.424-35G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-35G>A
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12553
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10955
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12773
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4244
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 775
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10945
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

22-50515967-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50515967
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50515967
    reference: chr 22
allele count: 2
allele frequency: 1.749322137671652e-5
allele num: 114330
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-36C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.334-36C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.187-36C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.322-36C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.424-36C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.334-36C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.424-36C>T
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12174
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12683
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11884
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3046
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6086
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2971
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20061
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4377
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3767
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

22-50515967-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50515967
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50515967
    reference: chr 22
allele count: 2
allele frequency: 1.749322137671652e-5
allele num: 114330
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.424-36C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.424-36C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-36C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.334-36C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.322-36C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.187-36C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.334-36C>G
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3046
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11884
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12174
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12683
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4377
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20061
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11075
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6086
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5782
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

22-50515977-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50515977
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50515977
    reference: chr 22
allele count: 4
allele frequency: 3.589053387169134e-5
allele num: 111450
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.334-46G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.334-46G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.187-46G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.424-46G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.424-46G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.322-46G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-46G>A
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16645
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3637
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12543
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12406
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8492
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5151
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1133
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3816
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

22-50515978-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50515978
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50515978
    reference: chr 22
allele count: 3
allele frequency: 2.694643049617361e-5
allele num: 111332
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.424-47C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.334-47C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.322-47C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.424-47C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.187-47C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-47C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.334-47C>T
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16593
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12527
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12462
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5545
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3818
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1248
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10556
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1800
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

22-50515983-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50515983
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50515983
    reference: chr 22
allele count: 1
allele frequency: 9.369085764611089e-6
allele num: 106734
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.187-52G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.322-52G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.424-52G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-52G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.424-52G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.334-52G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.334-52G>A
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16334
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3926
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12385
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5800
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12500
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3339
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1199
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3658
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1365
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8238
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1178
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS

22-50518300-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518300
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518300
    reference: chr 22
allele count: 18
allele frequency: 1.483214950806704e-4
allele num: 121358
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+473A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.423+47A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.423+47A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2369A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.186+47A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.333+47A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.333+47A>G
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21636
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3201
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5719
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34366
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9789
  bin: 9.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 894
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

22-50518303-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518303
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518303
    reference: chr 22
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.423+44C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2372C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.333+44C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.333+44C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.423+44C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.186+44C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+470C>T
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5721
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4042
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21645
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2555
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2135
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8456
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9772
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

22-50518318-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518318
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518318
    reference: chr 22
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.333+29C>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.423+29C>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.333+29C>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.186+29C>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2387C>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+455C>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.423+29C>A
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17791
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5718
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2558
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8469
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

22-50518319-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518319
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518319
    reference: chr 22
allele count: 15
allele frequency: 1.235849522962084e-4
allele num: 121374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.423+28G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.423+28G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.333+28G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+454G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.186+28G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2388G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.333+28G>A
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17794
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5718
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34535
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1528
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2137
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9770
  bin: 9.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2556
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

22-50518320-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518320
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518320
    reference: chr 22
allele count: 16
allele frequency: 1.318239491159556e-4
allele num: 121374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.423+27C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.423+27C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.333+27C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.333+27C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+453C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2389C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.186+27C>T
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4120
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5719
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17800
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2136
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP

22-50518325-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518325
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518325
    reference: chr 22
allele count: 25
allele frequency: 2.059817088242564e-4
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.333+22G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.423+22G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.423+22G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.333+22G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.186+22G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+448G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2394G>A
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 9.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4132
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5722
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21694
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8479
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2145
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

22-50518326-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518326
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518326
    reference: chr 22
allele count: 22
allele frequency: 1.81260916850674e-4
allele num: 121372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+447C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.333+21C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.186+21C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.423+21C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2395C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.333+21C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.423+21C>T
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21701
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3182
  bin: 9.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8486
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS

22-50518326-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518326
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518326
    reference: chr 22
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.333+21C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+447C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2395C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.423+21C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.333+21C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.423+21C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.186+21C>G
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21701
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3182
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8486
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9726
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1529
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34593
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff

22-50518328-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518328
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518328
    reference: chr 22
allele count: 15
allele frequency: 1.235808795663135e-4
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2397C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+445C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.333+19C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.423+19C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.186+19C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.333+19C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.423+19C>T
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17820
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3167
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2150
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9704
  bin: 9.75e1
  variant carriers: 14
num of homozygotes: 1
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/22-50518329-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518329
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518329
    reference: chr 22
allele count: 3
allele frequency: 2.471658317954126e-5
allele num: 121376
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.423+18T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.333+18T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.186+18T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+444T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.333+18T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.423+18T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2398T>G
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4139
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17827
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21730
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2152
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34626
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1530
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8494
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

22-50518335-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518335
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518335
    reference: chr 22
allele count: 4
allele frequency: 3.29549012176836e-5
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.186+12C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+438C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2404C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.333+12C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.423+12C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.423+12C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.333+12C>T
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5731
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21734
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 17835
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2151
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2562
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

22-50518338-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518338
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518338
    reference: chr 22
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.423+9A>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.333+9A>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.333+9A>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.423+9A>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2407A>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.186+9A>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+435A>C
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17837
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21739
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1532
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2563
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9685
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34644
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

22-50518346-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518346
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518346
    reference: chr 22
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.333+1G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.423+1G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.186+1G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+427G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.333+1G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.423+1G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2415G>A
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4136
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21748
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17843
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5737
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2564
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9686
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
hgvs: c.423+1G>A
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

22-50518352-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518352
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518352
    reference: chr 22
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.418A>G
  hgvsp: ENSP00000310375.5:p.Ile140Val
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2421A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.181A>G
  hgvsp: ENSP00000438910.1:p.Ile61Val
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.328A>G
  hgvsp: ENSP00000415877.2:p.Ile110Val
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+421A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.328A>G
  hgvsp: ENSP00000401385.1:p.Ile110Val
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.418A>G
  hgvsp: ENSP00000379216.2:p.Ile140Val
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4133
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2562
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1535
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile140Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

22-50518371-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518371
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518371
    reference: chr 22
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2440A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+402A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.309A>G
  hgvsp: ENST00000431262.2:c.309A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.399A>G
  hgvsp: ENST00000311597.5:c.399A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.399A>G
  hgvsp: ENST00000395876.2:c.399A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.162A>G
  hgvsp: ENST00000535444.1:c.162A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.309A>G
  hgvsp: ENST00000442311.1:c.309A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4130
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21759
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9683
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34664
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2153
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2565
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1534
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu133Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum

22-50518374-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518374
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518374
    reference: chr 22
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.306A>G
  hgvsp: ENST00000442311.1:c.306A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.396A>G
  hgvsp: ENST00000311597.5:c.396A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.159A>G
  hgvsp: ENST00000535444.1:c.159A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+399A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2443A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.306A>G
  hgvsp: ENST00000431262.2:c.306A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.396A>G
  hgvsp: ENST00000395876.2:c.396A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3152
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4130
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2564
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1533
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9681
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2153
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Lys132Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

22-50518375-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518375
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518375
    reference: chr 22
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.395A>C
  hgvsp: ENSP00000310375.5:p.Lys132Thr
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.305A>C
  hgvsp: ENSP00000415877.2:p.Lys102Thr
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.395A>C
  hgvsp: ENSP00000379216.2:p.Lys132Thr
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.158A>C
  hgvsp: ENSP00000438910.1:p.Lys53Thr
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+398A>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2444A>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.305A>C
  hgvsp: ENSP00000401385.1:p.Lys102Thr
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3151
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2153
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34667
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Lys132Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD

22-50518377-G-GCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518377
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518379
    reference: chr 22
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: GCA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.301_302dupTG
  hgvsp: ENSP00000415877.2:p.Lys102AlafsTer3
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.391_392dupTG
  hgvsp: ENSP00000379216.2:p.Lys132AlafsTer3
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+394_321+395dupTG
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.301_302dupTG
  hgvsp: ENSP00000401385.1:p.Lys102AlafsTer3
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.154_155dupTG
  hgvsp: ENSP00000438910.1:p.Lys53AlafsTer3
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2448_268-2447dupTG
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.391_392dupTG
  hgvsp: ENSP00000310375.5:p.Lys132AlafsTer3
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21762
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3150
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4128
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8502
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34663
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1533
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2564
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9681
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Lys132AlafsTer3
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

22-50518378-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518378
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518378
    reference: chr 22
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.302G>A
  hgvsp: ENSP00000415877.2:p.Cys101Tyr
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+395G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.392G>A
  hgvsp: ENSP00000379216.2:p.Cys131Tyr
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.155G>A
  hgvsp: ENSP00000438910.1:p.Cys52Tyr
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2447G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.302G>A
  hgvsp: ENSP00000401385.1:p.Cys101Tyr
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.392G>A
  hgvsp: ENSP00000310375.5:p.Cys131Tyr
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4128
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17852
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3150
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2564
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Cys131Tyr
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum

22-50518379-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518379
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518379
    reference: chr 22
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.391T>A
  hgvsp: ENSP00000310375.5:p.Cys131Ser
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.154T>A
  hgvsp: ENSP00000438910.1:p.Cys52Ser
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+394T>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.301T>A
  hgvsp: ENSP00000401385.1:p.Cys101Ser
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2448T>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.391T>A
  hgvsp: ENSP00000379216.2:p.Cys131Ser
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.301T>A
  hgvsp: ENSP00000415877.2:p.Cys101Ser
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3148
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34665
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1535
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2155
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2564
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Cys131Ser
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/22-50518382-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518382
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518381
    reference: chr 22
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+390delT
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.387delT
  hgvsp: ENSP00000310375.5:p.Phe129LeufsTer5
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.297delT
  hgvsp: ENSP00000401385.1:p.Phe99LeufsTer5
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.297delT
  hgvsp: ENSP00000415877.2:p.Phe99LeufsTer5
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.150delT
  hgvsp: ENSP00000438910.1:p.Phe50LeufsTer5
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.387delT
  hgvsp: ENSP00000379216.2:p.Phe129LeufsTer5
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2452delT
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21765
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3149
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9678
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34665
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Phe129LeufsTer5
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: CA
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

22-50518391-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518391
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518391
    reference: chr 22
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.289A>G
  hgvsp: ENSP00000415877.2:p.Ile97Val
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.142A>G
  hgvsp: ENSP00000438910.1:p.Ile48Val
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.379A>G
  hgvsp: ENSP00000310375.5:p.Ile127Val
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2460A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.379A>G
  hgvsp: ENSP00000379216.2:p.Ile127Val
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+382A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.289A>G
  hgvsp: ENSP00000401385.1:p.Ile97Val
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17852
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3148
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2564
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8504
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9677
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile127Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ

22-50518398-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518398
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518398
    reference: chr 22
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.372G>C
  hgvsp: ENST00000395876.2:c.372G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.282G>C
  hgvsp: ENST00000442311.1:c.282G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2467G>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.282G>C
  hgvsp: ENST00000431262.2:c.282G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.372G>C
  hgvsp: ENST00000311597.5:c.372G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+375G>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.135G>C
  hgvsp: ENST00000535444.1:c.135G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17852
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4121
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3149
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2564
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8504
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34664
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr124Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

22-50518399-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518399
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518399
    reference: chr 22
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.281C>T
  hgvsp: ENSP00000401385.1:p.Thr94Met
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.371C>T
  hgvsp: ENSP00000379216.2:p.Thr124Met
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.281C>T
  hgvsp: ENSP00000415877.2:p.Thr94Met
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2468C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.134C>T
  hgvsp: ENSP00000438910.1:p.Thr45Met
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.371C>T
  hgvsp: ENSP00000310375.5:p.Thr124Met
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+374C>T
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3148
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4121
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17853
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1535
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2154
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8503
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr124Met
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

22-50518402-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518402
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518402
    reference: chr 22
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+371C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.368C>T
  hgvsp: ENSP00000379216.2:p.Thr123Ile
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.278C>T
  hgvsp: ENSP00000415877.2:p.Thr93Ile
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.278C>T
  hgvsp: ENSP00000401385.1:p.Thr93Ile
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2471C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.368C>T
  hgvsp: ENSP00000310375.5:p.Thr123Ile
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.131C>T
  hgvsp: ENSP00000438910.1:p.Thr44Ile
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17854
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3148
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4121
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8504
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34670
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1535
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2154
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr123Ile
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

22-50518412-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518412
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518412
    reference: chr 22
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.121G>C
  hgvsp: ENSP00000438910.1:p.Ala41Pro
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.358G>C
  hgvsp: ENSP00000310375.5:p.Ala120Pro
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.358G>C
  hgvsp: ENSP00000379216.2:p.Ala120Pro
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2481G>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.268G>C
  hgvsp: ENSP00000401385.1:p.Ala90Pro
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+361G>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.268G>C
  hgvsp: ENSP00000415877.2:p.Ala90Pro
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4118
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3147
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17853
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8502
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34672
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala120Pro
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

22-50518416-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518416
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518416
    reference: chr 22
allele count: 5
allele frequency: 4.119294776734223e-5
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2485G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+357G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.354G>A
  hgvsp: ENST00000395876.2:c.354G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.264G>A
  hgvsp: ENST00000431262.2:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.264G>A
  hgvsp: ENST00000442311.1:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.117G>A
  hgvsp: ENST00000535444.1:c.117G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.354G>A
  hgvsp: ENST00000311597.5:c.354G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17853
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3150
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr118Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

22-50518416-CGTGGAAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518416
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518409
    reference: chr 22
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.257_263delTTTCCAC
  hgvsp: ENSP00000401385.1:p.Val86GlyfsTer4
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.347_353delTTTCCAC
  hgvsp: ENSP00000310375.5:p.Val116GlyfsTer4
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.257_263delTTTCCAC
  hgvsp: ENSP00000415877.2:p.Val86GlyfsTer4
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.347_353delTTTCCAC
  hgvsp: ENSP00000379216.2:p.Val116GlyfsTer4
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.110_116delTTTCCAC
  hgvsp: ENSP00000438910.1:p.Val37GlyfsTer4
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17853
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3150
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34664
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2560
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9671
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2153
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val116GlyfsTer4
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: CGTGGAAA
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

22-50518417-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518417
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518417
    reference: chr 22
allele count: 2
allele frequency: 1.647690761397901e-5
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2486C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+356C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.116C>T
  hgvsp: ENSP00000438910.1:p.Thr39Met
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.263C>T
  hgvsp: ENSP00000415877.2:p.Thr88Met
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.353C>T
  hgvsp: ENSP00000310375.5:p.Thr118Met
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.263C>T
  hgvsp: ENSP00000401385.1:p.Thr88Met
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.353C>T
  hgvsp: ENSP00000379216.2:p.Thr118Met
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17854
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21773
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34667
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr118Met
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

22-50518424-CAAACAATAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518424
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518415
    reference: chr 22
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.247_255delATATTGTTT
  hgvsp: ENSP00000415877.2:p.Ile83_Phe85del
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.100_108delATATTGTTT
  hgvsp: ENSP00000438910.1:p.Ile34_Phe36del
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.337_345delATATTGTTT
  hgvsp: ENSP00000310375.5:p.Ile113_Phe115del
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.337_345delATATTGTTT
  hgvsp: ENSP00000379216.2:p.Ile113_Phe115del
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.247_255delATATTGTTT
  hgvsp: ENSP00000401385.1:p.Ile83_Phe85del
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4111
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8501
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2561
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ile113_Phe115del
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: CAAACAATAT
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/22-50518424-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518424
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518423
    reference: chr 22
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.345delT
  hgvsp: ENSP00000310375.5:p.Phe115LeufsTer7
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.255delT
  hgvsp: ENSP00000401385.1:p.Phe85LeufsTer7
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.108delT
  hgvsp: ENSP00000438910.1:p.Phe36LeufsTer7
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.345delT
  hgvsp: ENSP00000379216.2:p.Phe115LeufsTer7
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+348delT
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.255delT
  hgvsp: ENSP00000415877.2:p.Phe85LeufsTer7
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2494delT
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4111
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34660
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8501
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Phe115LeufsTer7
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
reference allele: CA
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP

22-50518430-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518430
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518430
    reference: chr 22
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.103T>C
  hgvsp: ENST00000535444.1:c.103T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.250T>C
  hgvsp: ENST00000431262.2:c.250T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2499T>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.250T>C
  hgvsp: ENST00000442311.1:c.250T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+343T>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.340T>C
  hgvsp: ENST00000311597.5:c.340T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.340T>C
  hgvsp: ENST00000395876.2:c.340T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17847
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4104
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8497
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34649
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu114Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

22-50518433-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518433
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518433
    reference: chr 22
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.247A>T
  hgvsp: ENSP00000415877.2:p.Ile83Leu
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.247A>T
  hgvsp: ENSP00000401385.1:p.Ile83Leu
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.337A>T
  hgvsp: ENSP00000379216.2:p.Ile113Leu
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+340A>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.337A>T
  hgvsp: ENSP00000310375.5:p.Ile113Leu
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.100A>T
  hgvsp: ENSP00000438910.1:p.Ile34Leu
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2502A>T
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4100
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17842
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21770
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9666
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8497
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ile113Leu
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

22-50518434-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518434
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518434
    reference: chr 22
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.246G>C
  hgvsp: ENSP00000415877.2:p.Gln82His
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.336G>C
  hgvsp: ENSP00000379216.2:p.Gln112His
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+339G>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.336G>C
  hgvsp: ENSP00000310375.5:p.Gln112His
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2503G>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.246G>C
  hgvsp: ENSP00000401385.1:p.Gln82His
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.99G>C
  hgvsp: ENSP00000438910.1:p.Gln33His
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4100
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17843
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9665
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1535
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gln112His
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD

22-50518441-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518441
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518441
    reference: chr 22
allele count: 7
allele frequency: 5.768723628691983e-5
allele num: 121344
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.239A>G
  hgvsp: ENSP00000415877.2:p.Asn80Ser
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+332A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.329A>G
  hgvsp: ENSP00000310375.5:p.Asn110Ser
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.239A>G
  hgvsp: ENSP00000401385.1:p.Asn80Ser
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.92A>G
  hgvsp: ENSP00000438910.1:p.Asn31Ser
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2510A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.329A>G
  hgvsp: ENSP00000379216.2:p.Asn110Ser
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5725
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17834
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4104
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9662
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1535
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8494
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asn110Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

22-50518444-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518444
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518444
    reference: chr 22
allele count: 3
allele frequency: 2.472595400972554e-5
allele num: 121330
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2513C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.326C>T
  hgvsp: ENSP00000379216.2:p.Pro109Leu
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.236C>T
  hgvsp: ENSP00000415877.2:p.Pro79Leu
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.89C>T
  hgvsp: ENSP00000438910.1:p.Pro30Leu
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+329C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.236C>T
  hgvsp: ENSP00000401385.1:p.Pro79Leu
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.326C>T
  hgvsp: ENSP00000310375.5:p.Pro109Leu
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17823
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5719
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4104
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21742
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34580
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8490
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2548
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro109Leu
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP

22-50518450-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518450
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518450
    reference: chr 22
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+323A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.85-2A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2519A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.232-2A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.232-2A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.322-2A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.322-2A>G
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5706
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2141
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2545
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
hgvs: c.322-2A>G
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

22-50518451-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518451
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518451
    reference: chr 22
allele count: 1
allele frequency: 8.248239000973292e-6
allele num: 121238
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2520C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.85-3C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.232-3C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.322-3C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.322-3C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.232-3C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+322C>G
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5700
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4076
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3144
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2139
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2535
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9642
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: c.322-3C>G
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/22-50518452-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518452
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518452
    reference: chr 22
allele count: 1
allele frequency: 8.248102936324645e-6
allele num: 121240
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.232-4T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.322-4T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.322-4T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2521T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.232-4T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+321T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.85-4T>G
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21693
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3143
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5699
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4079
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2139
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 2.25e1
  variant carriers: 0
hgvs: c.322-4T>G
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD

22-50518452-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518452
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518452
    reference: chr 22
allele count: 1
allele frequency: 8.248102936324645e-6
allele num: 121240
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+321T>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2521T>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.85-4T>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.322-4T>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.232-4T>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.322-4T>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.232-4T>C
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5699
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21693
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4079
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3143
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34456
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9638
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8459
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2536
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
hgvs: c.322-4T>C
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

22-50518457-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518457
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518457
    reference: chr 22
allele count: 1
allele frequency: 8.25695648583932e-6
allele num: 121110
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.322-9G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2526G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.232-9G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.85-9G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.232-9G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+316G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.322-9G>A
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3143
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17593
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4070
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21635
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2524
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2124
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8365
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34238
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9631
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/22-50518459-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518459
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518459
    reference: chr 22
allele count: 15
allele frequency: 1.239648931422621e-4
allele num: 121002
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+314T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.232-11T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.322-11T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.232-11T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.85-11T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2528T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.322-11T>G
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21569
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3143
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17464
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5597
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9632
  bin: 9.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34008
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum

22-50518460-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518460
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518460
    reference: chr 22
allele count: 1
allele frequency: 8.275405494869249e-6
allele num: 120840
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.232-12C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+313C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.85-12C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.322-12C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.322-12C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2529C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.232-12C>T
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21493
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5525
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3143
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17301
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2501
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33753
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

22-50518462-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518462
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518462
    reference: chr 22
allele count: 7
allele frequency: 5.796333405097461e-5
allele num: 120766
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+311G>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2531G>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.322-14G>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.85-14G>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.322-14G>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.232-14G>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.232-14G>C
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21464
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17204
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5484
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3143
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1499
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff

22-50518474-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518474
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518474
    reference: chr 22
allele count: 1
allele frequency: 8.399267583866688e-6
allele num: 119058
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.322-26A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2543A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.232-26A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.322-26A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+299A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.85-26A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.232-26A>G
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19249
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4841
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3140
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4277
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29592
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4040
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1795
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1414
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

22-50518478-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518478
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518478
    reference: chr 22
allele count: 1
allele frequency: 8.447087444249223e-6
allele num: 118384
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.232-30A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.322-30A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2547A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+295A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.85-30A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.232-30A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.322-30A>G
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12979
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6085
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3140
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17757
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4334
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4027
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3527
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1720
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25969
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6455
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4979
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2173
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS

22-50518494-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518494
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518494
    reference: chr 22
allele count: 4
allele frequency: 3.482924960381728e-5
allele num: 114846
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.232-46C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+279C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.268-2563C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.85-46C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.322-46C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.322-46C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.232-46C>G
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11819
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2785
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3140
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11297
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5080
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2940
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2591
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4030
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4162
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4772
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5809
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff

22-50518722-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518722
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518722
    reference: chr 22
allele count: 0
allele frequency: 0.0e0
allele num: 68754
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+51G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.321+51G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.84+51G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.321+51G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.231+51G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.267+2791G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.231+51G>A
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 6152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17386
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21401
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3985
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1389
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3073
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5185
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4846
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1742
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3225
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7649
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

22-50518723-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518723
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518723
    reference: chr 22
allele count: 67869
allele frequency: 9.514523635955813e-1
allele num: 71332
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.84+50T>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.321+50T>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.231+50T>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+50T>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.321+50T>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.267+2790T>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.231+50T>C
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6574
  bin: 1.75e1
  variant carriers: 6536
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 2.75e1
  variant carriers: 961
genotype depth: GenotypeDepth
  all individuals: 20597
  bin: 7.5e0
  variant carriers: 20058
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 9.25e1
  variant carriers: 507
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 351
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 4.25e1
  variant carriers: 395
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 344
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 4.75e1
  variant carriers: 408
genotype depth: GenotypeDepth
  all individuals: 17773
  bin: 1.25e1
  variant carriers: 17632
genotype depth: GenotypeDepth
  all individuals: 3199
  bin: 2.5e0
  variant carriers: 2992
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 402
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 2.25e1
  variant carriers: 2076
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 3.25e1
  variant carriers: 601
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.25e1
  variant carriers: 371
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.75e1
  variant carriers: 415
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 8.25e1
  variant carriers: 409
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 3.75e1
  variant carriers: 475
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 373
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.75e1
  variant carriers: 489
genotype depth: GenotypeDepth
  all individuals: 3104
  bin: 9.75e1
  variant carriers: 3094
genotype quality: GenotypeQuality
  all individuals: 7758
  bin: 3.25e1
  variant carriers: 7740
genotype quality: GenotypeQuality
  all individuals: 4295
  bin: 2.75e1
  variant carriers: 4283
genotype quality: GenotypeQuality
  all individuals: 5947
  bin: 3.75e1
  variant carriers: 5931
genotype quality: GenotypeQuality
  all individuals: 6090
  bin: 1.75e1
  variant carriers: 6057
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 6.75e1
  variant carriers: 697
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 5.75e1
  variant carriers: 790
genotype quality: GenotypeQuality
  all individuals: 2067
  bin: 5.25e1
  variant carriers: 2064
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 6.25e1
  variant carriers: 1066
genotype quality: GenotypeQuality
  all individuals: 1236
  bin: 7.5e0
  variant carriers: 1185
genotype quality: GenotypeQuality
  all individuals: 2287
  bin: 4.25e1
  variant carriers: 2281
num of homozygotes: 32314
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

22-50518726-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518726
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518726
    reference: chr 22
allele count: 1
allele frequency: 1.526670941345302e-5
allele num: 65502
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.231+47G>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.267+2787G>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.84+47G>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.321+47G>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.321+47G>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+47G>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.231+47G>C
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4479
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5547
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15611
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22972
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2799
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5678
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1952
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4182
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3950
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7149
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4859
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

22-50518731-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518731
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518731
    reference: chr 22
allele count: 1
allele frequency: 1.533648242439114e-5
allele num: 65204
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.321+42G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.321+42G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.267+2782G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.231+42G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+42G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.84+42G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.231+42G>A
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5058
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23046
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4397
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15585
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3892
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4094
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5508
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3677
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2651
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

22-50518732-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518732
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518732
    reference: chr 22
allele count: 3
allele frequency: 4.575681776584711e-5
allele num: 65564
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.267+2781C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.84+41C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.231+41C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.231+41C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.321+41C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.321+41C>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+41C>T
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4298
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15591
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4795
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23095
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3885
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4113
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5510
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3612
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1341
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3480
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2490
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ

22-50518734-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518734
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518734
    reference: chr 22
allele count: 1
allele frequency: 1.519756838905775e-5
allele num: 65800
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.321+39G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+39G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.231+39G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.321+39G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.84+39G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.267+2779G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.231+39G>A
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15513
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4456
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3929
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4084
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1272
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2582
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5455
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3511
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22520
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ

22-50518737-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518737
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518737
    reference: chr 22
allele count: 0
allele frequency: 0.0e0
allele num: 66186
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.321+36A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.231+36A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.84+36A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+36A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.321+36A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.267+2776A>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.231+36A>G
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23507
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15304
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3955
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1131
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1865
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4082
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2012
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23681
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3299
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/22-50518738-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518738
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518738
    reference: chr 22
allele count: 1
allele frequency: 1.513271390091099e-5
allele num: 66082
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.231+35G>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.321+35G>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.84+35G>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.267+2775G>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.321+35G>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.231+35G>T
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+35G>T
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15216
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23548
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3711
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3824
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23848
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3588
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3276
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5366
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1095
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1947
  bin: 1.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

22-50518740-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518740
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518740
    reference: chr 22
allele count: 2
allele frequency: 3.023431594860166e-5
allele num: 66150
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.231+33G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.321+33G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+33G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.84+33G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.321+33G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.231+33G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.267+2773G>A
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23674
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14947
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3487
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5287
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24470
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1594
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3148
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3377
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3995
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff

22-50518744-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518744
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518744
    reference: chr 22
allele count: 0
allele frequency: 0.0e0
allele num: 66588
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.321+29C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+29C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.267+2769C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.231+29C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.84+29C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.231+29C>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.321+29C>G
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14483
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6095
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3231
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23879
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 907
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3917
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3165
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4991
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6148
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1604
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff

22-50518747-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518747
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518747
    reference: chr 22
allele count: 1
allele frequency: 1.487962384310925e-5
allele num: 67206
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.321+26T>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.231+26T>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.231+26T>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.84+26T>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+26T>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.321+26T>C
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.267+2766T>C
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2980
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13910
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24010
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1128
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7148
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2887
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2621
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25560
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

22-50518770-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518770
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518770
    reference: chr 22
allele count: 1
allele frequency: 1.399384270920795e-5
allele num: 71460
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+3G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.84+3G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.231+3G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.321+3G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.321+3G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.231+3G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.267+2743G>A
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13811
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23269
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9852
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2657
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26222
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1453
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13830
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
hgvs: c.321+3G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/22-50518771-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518771
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518771
    reference: chr 22
allele count: 1
allele frequency: 1.396492012065691e-5
allele num: 71608
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+2T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.231+2T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.321+2T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.321+2T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.84+2T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.267+2742T>G
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.231+2T>G
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13894
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23230
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9796
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13762
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2592
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2611
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26159
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 1.25e1
  variant carriers: 0
hgvs: c.321+2T>G
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

22-50518772-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50518772
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50518772
    reference: chr 22
allele count: 1
allele frequency: 1.393922497909116e-5
allele num: 71740
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000438910
  ensembl transcript: ENST00000535444
  gene symbol: MLC1
  hgvsc: ENST00000535444.1:c.84+1G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000401385
  ensembl transcript: ENST00000442311
  gene symbol: MLC1
  hgvsc: ENST00000442311.1:c.231+1G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000445805
  ensembl transcript: ENST00000538737
  gene symbol: MLC1
  hgvsc: ENST00000538737.1:c.321+1G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000415877
  ensembl transcript: ENST00000431262
  gene symbol: MLC1
  hgvsc: ENST00000431262.2:c.231+1G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000412448
  ensembl transcript: ENST00000450140
  gene symbol: MLC1
  hgvsc: ENST00000450140.2:c.267+2741G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000379216
  ensembl transcript: ENST00000395876
  gene symbol: MLC1
  hgvsc: ENST00000395876.2:c.321+1G>A
  variant of: http://identifiers.org/hgnc/17082
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100427
  ensembl protein: ENSP00000310375
  ensembl transcript: ENST00000311597
  gene symbol: MLC1
  hgvsc: ENST00000311597.5:c.321+1G>A
  variant of: http://identifiers.org/hgnc/17082
canonical: true
consequence: splice donor
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9697
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 2.75e1
  variant carriers: 0
hgvs: c.321+1G>A
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 6559
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1250
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5785
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 965
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4358
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.565043195192187e-5
allele num: 63896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9974
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6166
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.22975330176925e-5
allele num: 16052
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11238
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.71e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.66e-1

QD
type: SiteQuality
SIO_000300: 1.331e1

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.0e0

DP
type: SiteQuality
SIO_000300: 1.667669e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.938e0

GenotypeQuality
all individuals: 1917
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 872
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6621
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 950
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1248
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9976
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16050
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.131949011870087e-5
allele num: 63858
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.665e0

VQSLOD
type: SiteQuality
SIO_000300: 4.49e0

DP
type: SiteQuality
SIO_000300: 1.666633e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.789e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.79e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

GenotypeQuality
all individuals: 378
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2191
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5785
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 407
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4293
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33508
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.903133903133904e-5
allele num: 11232
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.565974505935043e-5
allele num: 63858
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9976
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16050
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.789e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.94e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.666633e6

MQRankSum
type: SiteQuality
SIO_000300: 1.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.665e0

VQSLOD
type: SiteQuality
SIO_000300: 4.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

GenotypeQuality
all individuals: 950
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1248
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33508
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5785
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 872
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4293
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63858
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11232
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9976
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6160
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.246105919003115e-4
allele num: 16050
num of homozygotes: 1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.665e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

DP
type: SiteQuality
SIO_000300: 1.666633e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.789e1

VQSLOD
type: SiteQuality
SIO_000300: 4.49e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.94e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 838
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GenotypeQuality
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variant carriers: 8

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8394
num of homozygotes: 0

Latino
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allele count: 6
allele frequency: 5.39471318108254e-4
allele num: 11122
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.275100401606425e-5
allele num: 15936
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6038
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.586143450813691e-5
allele num: 63046
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.114e0

DP
type: SiteQuality
SIO_000300: 1.54988e6

MQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-2

QD
type: SiteQuality
SIO_000300: 1.551e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.58e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 1.024170421958214e-4
allele num: 9764
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6000
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.591343093570974e-5
allele num: 62840
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
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SIO_000300: -1.033e0

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.515078e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.53e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11040
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.027960526315789e-4
allele num: 9728
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8352
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.313131313131313e-5
allele num: 15840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5978
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.625e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

QD
type: SiteQuality
SIO_000300: 1.247e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.62e-1

DP
type: SiteQuality
SIO_000300: 1.50533e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.598414372942042e-5
allele num: 62562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5978
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15840
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8352
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.057971014492754e-5
allele num: 11040
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.81e-1

QD
type: SiteQuality
SIO_000300: 1.247e1

DP
type: SiteQuality
SIO_000300: 1.50533e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.62e-1

FS
type: SiteQuality
SIO_000300: 1.625e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.38e-1

GenotypeQuality
all individuals: 1806
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5781
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variant carriers: 4

GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10766
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8100
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5796
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60908
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.215851602023609e-4
allele num: 9488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15582
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.8e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.68e-1

MQ
type: SiteQuality
SIO_000300: 5.906e1

QD
type: SiteQuality
SIO_000300: 1.574e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.432726e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.3e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8469
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variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.305788200260562e-5
allele num: 10746
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15568
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.235788433020267e-4
allele num: 8092
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5788
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.644141922330736e-5
allele num: 60822
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.115e0

MQ
type: SiteQuality
SIO_000300: 5.833e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

QD
type: SiteQuality
SIO_000300: 9.16e0

DP
type: SiteQuality
SIO_000300: 1.431775e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.98e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7662
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15216
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.719453901440902e-5
allele num: 58158
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.58e-2

MQ
type: SiteQuality
SIO_000300: 5.901e1

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.428373e6

QD
type: SiteQuality
SIO_000300: 1.029e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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num of homozygotes: 0

East Asian
type: Population
allele count: 17
allele frequency: 1.964863615349052e-3
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.42e-1

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.979e1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.319163e6

BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele num: 8652
num of homozygotes: 0

African
type: Population
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Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

QD
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
SIO_000300: 2.318165e6

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.14e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.28e-1

FS
type: SiteQuality
SIO_000300: 2.727e0

MQ
type: SiteQuality
SIO_000300: 5.94e1

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.575e0

QD
type: SiteQuality
SIO_000300: 1.207e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.98e-1

DP
type: SiteQuality
SIO_000300: 2.318814e6

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 898
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 14
allele frequency: 8.478682170542636e-4
allele num: 16512
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.319247e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.01e-1

FS
type: SiteQuality
SIO_000300: 4.237e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.571e0

MQRankSum
type: SiteQuality
SIO_000300: 2.7e-2

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

QD
type: SiteQuality
SIO_000300: 1.174e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 16

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.454828122300915e-4
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

East Asian
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allele count: 11
allele frequency: 1.271382339343504e-3
allele num: 8652
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.93e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.19e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 1.263e1

VQSLOD
type: SiteQuality
SIO_000300: 5.02e0

DP
type: SiteQuality
SIO_000300: 2.318812e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 25

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998410842253606e-5
allele num: 66702
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 23
allele frequency: 2.6583448913546e-3
allele num: 8652
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.318474e6

MQ
type: SiteQuality
SIO_000300: 5.949e1

QD
type: SiteQuality
SIO_000300: 1.191e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.94e0

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.34e-1

FS
type: SiteQuality
SIO_000300: 6.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.54e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 34593
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 22

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 685
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 3.148236987287119e-4
allele num: 66704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.335e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

DP
type: SiteQuality
SIO_000300: 2.316926e6

VQSLOD
type: SiteQuality
SIO_000300: 3.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.93e0

FS
type: SiteQuality
SIO_000300: 1.262e0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 685
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.262e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.93e0

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

DP
type: SiteQuality
SIO_000300: 2.316926e6

QD
type: SiteQuality
SIO_000300: 1.335e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 1529
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 9
allele frequency: 7.77336327517706e-4
allele num: 11578
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.495128166691651e-5
allele num: 66710
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.46e-2

DP
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.26e0

MQRankSum
type: SiteQuality
SIO_000300: 3.71e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.883506343713956e-4
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.37e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.109e0

MQ
type: SiteQuality
SIO_000300: 5.918e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.15e-1

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.49707690001499e-5
allele num: 66710
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.629999999999999e-1

VQSLOD
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BaseQRankSum
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.76e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.21e0

InbreedingCoeff
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FS
type: SiteQuality
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VQSLOD
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ClippingRankSum
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MQ
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.314107e6

QD
type: SiteQuality
SIO_000300: 1.411e1

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 8501
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GenotypeQuality
all individuals: 13
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.498756032493031e-5
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South Asian
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European (Finnish)
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East Asian
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MQRankSum
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QD
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VQSLOD
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MQ
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ReadPosRankSum
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FS
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InbreedingCoeff
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DP
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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African
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Latino
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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East Asian
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Other
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QD
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ReadPosRankSum
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FS
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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African
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allele frequency: 0.0e0
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Latino
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Other
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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MQRankSum
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ReadPosRankSum
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FS
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VQSLOD
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BaseQRankSum
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DP
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InbreedingCoeff
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MQ
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele num: 66728
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African
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Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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South Asian
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East Asian
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MQRankSum
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QD
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VQSLOD
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InbreedingCoeff
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DP
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FS
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.976e1

ClippingRankSum
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SIO_000300: 8.1e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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Latino
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South Asian
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African
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Other
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European (Finnish)
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ClippingRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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DP
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FS
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

Latino
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Other
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East Asian
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South Asian
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MQRankSum
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BaseQRankSum
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QD
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FS
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ReadPosRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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European (Finnish)
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European (Non-Finnish)
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African
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South Asian
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DP
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BaseQRankSum
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ReadPosRankSum
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QD
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FS
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ClippingRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Finnish)
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South Asian
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African
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European (Non-Finnish)
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VQSLOD
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MQ
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FS
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ClippingRankSum
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MQRankSum
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QD
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InbreedingCoeff
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DP
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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European (Non-Finnish)
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Latino
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South Asian
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ReadPosRankSum
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FS
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InbreedingCoeff
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DP
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MQ
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MQRankSum
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VQSLOD
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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num of homozygotes: 0

Latino
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East Asian
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South Asian
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African
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European (Finnish)
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Other
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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DP
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ReadPosRankSum
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SIO_000300: -4.21e-1

QD
type: SiteQuality
SIO_000300: 1.074e1

VQSLOD
type: SiteQuality
SIO_000300: 6.29e-1

FS
type: SiteQuality
SIO_000300: 8.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-2

MQ
type: SiteQuality
SIO_000300: 5.96e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2154
bin: 7.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.1e0

MQRankSum
type: SiteQuality
SIO_000300: 5.47e-1

QD
type: SiteQuality
SIO_000300: 1.586e1

FS
type: SiteQuality
SIO_000300: 7.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.56e-1

MQ
type: SiteQuality
SIO_000300: 5.937e1

DP
type: SiteQuality
SIO_000300: 2.313821e6

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.726e0

VQSLOD
type: SiteQuality
SIO_000300: 7.42e-1

ReadPosRankSum
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DP
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SIO_000300: 2.313759e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.227e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.272e1

DP
type: SiteQuality
SIO_000300: 2.313713e6

FS
type: SiteQuality
SIO_000300: 1.662e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.495e0

MQRankSum
type: SiteQuality
SIO_000300: 7.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.88e-1

FS
type: SiteQuality
SIO_000300: 1.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.366e0

DP
type: SiteQuality
SIO_000300: 2.313623e6

MQRankSum
type: SiteQuality
SIO_000300: 6.53e-1

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.429e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

VQSLOD
type: SiteQuality
SIO_000300: -2.201e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
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allele count: 3
allele frequency: 2.592016588906169e-4
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.922337562475971e-4
allele num: 10404
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

FS
type: SiteQuality
SIO_000300: 5.982e0

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.64e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.313644e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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BaseQRankSum
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InbreedingCoeff
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FS
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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SIO_000300: 1.92e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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FS
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
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FS
type: SiteQuality
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MQRankSum
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QD
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

African
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FS
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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MQ
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QD
type: SiteQuality
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MQRankSum
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1535
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.57e0

FS
type: SiteQuality
SIO_000300: 3.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e0

DP
type: SiteQuality
SIO_000300: 2.312611e6

VQSLOD
type: SiteQuality
SIO_000300: -7.897e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.75e0

MQ
type: SiteQuality
SIO_000300: 5.987e1

QD
type: SiteQuality
SIO_000300: 8.6e0

GenotypeQuality
all individuals: 2558
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2152
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.44e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.521e0

QD
type: SiteQuality
SIO_000300: 1.332e1

DP
type: SiteQuality
SIO_000300: 2.312573e6

GenotypeQuality
all individuals: 682
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2152
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.666e1

MQRankSum
type: SiteQuality
SIO_000300: -5.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.12e-1

DP
type: SiteQuality
SIO_000300: 2.312334e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
SIO_000300: 3.79e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 898
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.088745088976196e-4
allele num: 8654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.19e-1

FS
type: SiteQuality
SIO_000300: 9.11e-1

MQ
type: SiteQuality
SIO_000300: 5.923e1

MQRankSum
type: SiteQuality
SIO_000300: 3.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.33e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

DP
type: SiteQuality
SIO_000300: 2.311319e6

QD
type: SiteQuality
SIO_000300: 1.518e1

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
all individuals: 898
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variant carriers: 0

GenotypeQuality
all individuals: 2146
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0428e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQRankSum
type: SiteQuality
SIO_000300: 5.08e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.25e0

VQSLOD
type: SiteQuality
SIO_000300: -7.454e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.289e1

DP
type: SiteQuality
SIO_000300: 2.310501e6

GenotypeQuality
all individuals: 1528
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 675
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 34500
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8481
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500420117632937e-5
allele num: 66648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.432e1

DP
type: SiteQuality
SIO_000300: 2.308032e6

MQRankSum
type: SiteQuality
SIO_000300: 1.52e0

VQSLOD
type: SiteQuality
SIO_000300: 3.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

GenotypeQuality
all individuals: 270
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1527
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GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.51e0

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

QD
type: SiteQuality
SIO_000300: 1.358e1

MQ
type: SiteQuality
SIO_000300: 5.982e1

FS
type: SiteQuality
SIO_000300: 1.601e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 2.306325e6

VQSLOD
type: SiteQuality
SIO_000300: 7.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.04e-1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 2536
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8459
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5008254539997e-5
allele num: 66630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 2.356e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.89e0

VQSLOD
type: SiteQuality
SIO_000300: 4.52e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

DP
type: SiteQuality
SIO_000300: 2.305984e6

QD
type: SiteQuality
SIO_000300: 1.55e1

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5008254539997e-5
allele num: 66630
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.305984e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.52e-1

FS
type: SiteQuality
SIO_000300: 2.356e0

QD
type: SiteQuality
SIO_000300: 1.55e1

MQRankSum
type: SiteQuality
SIO_000300: 7.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.49e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.89e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 892
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502945773716484e-5
allele num: 66536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.317e1

DP
type: SiteQuality
SIO_000300: 2.299601e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.96e-1

FS
type: SiteQuality
SIO_000300: 2.152e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.152e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: -5.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.11e-1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2116
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8348
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 890
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1512
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2515
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 15
allele frequency: 9.088705768298595e-4
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66468
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.47e0

DP
type: SiteQuality
SIO_000300: 2.293975e6

MQ
type: SiteQuality
SIO_000300: 5.956e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.859e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.21e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

GenotypeQuality
all individuals: 2105
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9612
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1508
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 889
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8256
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.652509652509652e-5
allele num: 10360
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.59e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 8.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.64e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.63e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.3e-1

DP
type: SiteQuality
SIO_000300: 2.286516e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e-1

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1122
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33642
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9610
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2087
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8235
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variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2484
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.761978361669242e-4
allele num: 10352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.35e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.132e0

QD
type: SiteQuality
SIO_000300: 1.487e1

DP
type: SiteQuality
SIO_000300: 2.282544e6

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

MQRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

FS
type: SiteQuality
SIO_000300: 3.514e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

GenotypeQuality
all individuals: 2237
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1129
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1009
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6968
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 867
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9548
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 116
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531909678605349e-5
allele num: 65278
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.09e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.176391e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e-1

QD
type: SiteQuality
SIO_000300: 1.33e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.61e0

GenotypeQuality
all individuals: 1385
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2193
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9535
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 368
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1613
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1425
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.541782300339192e-5
allele num: 64860
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10208
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8264
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.949e1

VQSLOD
type: SiteQuality
SIO_000300: -6.53e-2

DP
type: SiteQuality
SIO_000300: 2.107407e6

MQRankSum
type: SiteQuality
SIO_000300: -6.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.035e0

QD
type: SiteQuality
SIO_000300: 1.521e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.058e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 9523
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1686
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1954
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variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1365
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 4
allele frequency: 5.10073960724305e-4
allele num: 7842
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16220
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9982
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.903958e6

MQ
type: SiteQuality
SIO_000300: 5.958e1

QD
type: SiteQuality
SIO_000300: 8.140000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.73e0

FS
type: SiteQuality
SIO_000300: 7.847e0

VQSLOD
type: SiteQuality
SIO_000300: -5.816e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

GenotypeQuality
all individuals: 7775
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10516
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8964
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2284
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4210
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5660
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6214
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10834
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2942
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38358
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.222453e6

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.900000000000001e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

QD
type: SiteQuality
SIO_000300: 1.541e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

GenotypeQuality
all individuals: 2035
bin: 1.25e1
variant carriers: 2014

GenotypeQuality
all individuals: 305
bin: 7.25e1
variant carriers: 303

GenotypeQuality
all individuals: 389
bin: 8.75e1
variant carriers: 388

GenotypeQuality
all individuals: 370
bin: 9.25e1
variant carriers: 369

GenotypeQuality
all individuals: 818
bin: 2.5e0
variant carriers: 122

GenotypeQuality
all individuals: 473
bin: 8.25e1
variant carriers: 471

GenotypeQuality
all individuals: 493
bin: 7.75e1
variant carriers: 492

GenotypeQuality
all individuals: 3253
bin: 4.75e1
variant carriers: 3246

GenotypeQuality
all individuals: 8632
bin: 2.25e1
variant carriers: 8566

GenotypeQuality
all individuals: 10848
bin: 9.75e1
variant carriers: 10824

European (Finnish)
type: Population
allele count: 3058
allele frequency: 9.820166987797045e-1
allele num: 3114
num of homozygotes: 1503

East Asian
type: Population
allele count: 4435
allele frequency: 9.961814914645103e-1
allele num: 4452
num of homozygotes: 2209

European (Non-Finnish)
type: Population
allele count: 36904
allele frequency: 9.287296154620496e-1
allele num: 39736
num of homozygotes: 17133

African
type: Population
allele count: 6326
allele frequency: 9.872034956304619e-1
allele num: 6408
num of homozygotes: 3122

South Asian
type: Population
allele count: 10807
allele frequency: 9.81918953298201e-1
allele num: 11006
num of homozygotes: 5309

Other
type: Population
allele count: 501
allele frequency: 9.209558823529411e-1
allele num: 544
num of homozygotes: 230

Latino
type: Population
allele count: 5838
allele frequency: 9.614624505928854e-1
allele num: 6072
num of homozygotes: 2808

BaseQRankSum
type: SiteQuality
SIO_000300: -1.307e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.346e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.34e0

QD
type: SiteQuality
SIO_000300: 3.112e1

DP
type: SiteQuality
SIO_000300: 1.252833e6

GenotypeQuality
all individuals: 149
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1412
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19342
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3581
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2487
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 867
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5368
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4004
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2708
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.721829069134458e-5
allele num: 36740
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.221426e6

VQSLOD
type: SiteQuality
SIO_000300: -6.364e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.84e-1

QD
type: SiteQuality
SIO_000300: 1.044e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.299999999999999e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.66e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.5e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.22e-1

GenotypeQuality
all individuals: 1375
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20699
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1765
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3762
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3003
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7149
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 134
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.735978112175102e-5
allele num: 36550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5370
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 5882
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 502
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
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QD
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DP
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e-1

FS
type: SiteQuality
SIO_000300: 3.965e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.06e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.89e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 5904
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 5404
num of homozygotes: 0

East Asian
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allele frequency: 4.950495049504951e-4
allele num: 4040
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.723014922121773e-5
allele num: 36724
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.82e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 1.846381093057607e-4
allele num: 5416
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 36902
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 10290
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
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InbreedingCoeff
type: SiteQuality
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QD
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.237776e6

FS
type: SiteQuality
SIO_000300: 3.183e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 502
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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MQRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.482e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.078e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 5944
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5446
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 500
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.696580735627225e-5
allele num: 37084
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.56e-1

MQ
type: SiteQuality
SIO_000300: 5.781e1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.248615e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.399999999999999e-3

FS
type: SiteQuality
SIO_000300: 1.269e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.154e0

QD
type: SiteQuality
SIO_000300: 2.21e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4078
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 5464
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 498
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 37118
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 1.939111886755866e-4
allele num: 10314
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2730
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.845e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-1

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.187e1

DP
type: SiteQuality
SIO_000300: 1.255844e6

InbreedingCoeff
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SIO_000300: -8.200000000000001e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 37332
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East Asian
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Other
type: Population
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VQSLOD
type: SiteQuality
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QD
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MQRankSum
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ClippingRankSum
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DP
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ReadPosRankSum
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FS
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 37664
num of homozygotes: 0

Latino
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African
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European (Finnish)
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East Asian
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South Asian
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FS
type: SiteQuality
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InbreedingCoeff
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MQ
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ClippingRankSum
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QD
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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num of homozygotes: 0

Latino
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Other
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South Asian
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European (Finnish)
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African
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East Asian
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VQSLOD
type: SiteQuality
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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DP
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QD
type: SiteQuality
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FS
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ClippingRankSum
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MQ
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Other
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African
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allele frequency: 1.572821642025794e-4
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 6150
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European (Finnish)
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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DP
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FS
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ReadPosRankSum
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MQ
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MQRankSum
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QD
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