22-32009340-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009340
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009340
    reference: chr 22
allele count: 6
allele frequency: 5.094330010698093e-5
allele num: 117778
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.445G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1315G>T
  hgvsp: ENSP00000398871.2:p.Val439Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2320G>T
  hgvsp: ENSP00000416469.1:p.Val774Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*809G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2107G>T
  hgvsp: ENSP00000397148.1:p.Val703Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2320G>T
  hgvsp: ENSP00000383146.1:p.Val774Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1333G>T
  hgvsp: ENSP00000405541.1:p.Arg445Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2566G>T
  hgvsp: ENSP00000383145.2:p.Val856Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2107G>T
  hgvsp: ENSP00000401199.1:p.Val703Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2473G>T
  hgvsp: ENSP00000402679.1:p.Val825Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2401G>T
  hgvsp: ENSP00000443025.1:p.Val801Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.3957G>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29202
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Val856Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

22-32009343-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009343
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009343
    reference: chr 22
allele count: 2
allele frequency: 1.699177598042548e-5
allele num: 117704
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2110T>G
  hgvsp: ENSP00000401199.1:p.Trp704Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2323T>G
  hgvsp: ENSP00000416469.1:p.Trp775Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2323T>G
  hgvsp: ENSP00000383146.1:p.Trp775Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2110T>G
  hgvsp: ENSP00000397148.1:p.Trp704Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2404T>G
  hgvsp: ENSP00000443025.1:p.Trp802Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*812T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1336T>G
  hgvsp: ENSP00000405541.1:p.Cys446Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.448T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1318T>G
  hgvsp: ENSP00000398871.2:p.Trp440Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.3960T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2476T>G
  hgvsp: ENSP00000402679.1:p.Trp826Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2569T>G
  hgvsp: ENSP00000383145.2:p.Trp857Gly
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15542
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29249
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp857Gly
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum

22-32009350-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009350
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009350
    reference: chr 22
allele count: 4
allele frequency: 3.39662375598655e-5
allele num: 117764
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1343C>T
  hgvsp: ENSP00000405541.1:p.Arg449Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2483C>T
  hgvsp: ENSP00000402679.1:p.Thr828Met
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2576C>T
  hgvsp: ENSP00000383145.2:p.Thr859Met
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2330C>T
  hgvsp: ENSP00000416469.1:p.Thr777Met
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2330C>T
  hgvsp: ENSP00000383146.1:p.Thr777Met
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2411C>T
  hgvsp: ENSP00000443025.1:p.Thr804Met
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2117C>T
  hgvsp: ENSP00000397148.1:p.Thr706Met
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2117C>T
  hgvsp: ENSP00000401199.1:p.Thr706Met
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.455C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1325C>T
  hgvsp: ENSP00000398871.2:p.Thr442Met
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.3967C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*819C>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15607
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr859Met
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

22-32009351-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009351
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009351
    reference: chr 22
allele count: 1
allele frequency: 8.488531993277082e-6
allele num: 117806
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2412G>A
  hgvsp: ENST00000540643.1:c.2412G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2484G>A
  hgvsp: ENST00000432498.1:c.2484G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1326G>A
  hgvsp: ENST00000417682.2:c.1326G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2118G>A
  hgvsp: ENST00000443011.1:c.2118G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2331G>A
  hgvsp: ENST00000400289.1:c.2331G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2577G>A
  hgvsp: ENST00000400288.2:c.2577G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2331G>A
  hgvsp: ENST00000443326.1:c.2331G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1344G>A
  hgvsp: ENSP00000405541.1:p.Arg449His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.456G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2118G>A
  hgvsp: ENST00000414585.1:c.2118G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.3968G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*820G>A
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg449His
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

22-32009368-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009368
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009368
    reference: chr 22
allele count: 6
allele frequency: 5.095541401273886e-5
allele num: 117750
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2429T>C
  hgvsp: ENSP00000443025.1:p.Leu810Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2135T>C
  hgvsp: ENSP00000401199.1:p.Leu712Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2594T>C
  hgvsp: ENSP00000383145.2:p.Leu865Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.3985T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2348T>C
  hgvsp: ENSP00000383146.1:p.Leu783Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*837T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2348T>C
  hgvsp: ENSP00000416469.1:p.Leu783Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2135T>C
  hgvsp: ENSP00000397148.1:p.Leu712Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1343T>C
  hgvsp: ENSP00000398871.2:p.Leu448Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1361T>C
  hgvsp: ENSP00000405541.1:p.Trp455Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2501T>C
  hgvsp: ENSP00000402679.1:p.Leu834Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.473T>C
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9568
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15985
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu865Pro
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

22-32009371-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009371
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009371
    reference: chr 22
allele count: 1
allele frequency: 8.50311213904289e-6
allele num: 117604
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2597A>G
  hgvsp: ENSP00000383145.2:p.Glu866Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2432A>G
  hgvsp: ENSP00000443025.1:p.Glu811Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2138A>G
  hgvsp: ENSP00000397148.1:p.Glu713Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1346A>G
  hgvsp: ENSP00000398871.2:p.Glu449Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2351A>G
  hgvsp: ENSP00000383146.1:p.Glu784Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.3988A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2351A>G
  hgvsp: ENSP00000416469.1:p.Glu784Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2138A>G
  hgvsp: ENSP00000401199.1:p.Glu713Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2504A>G
  hgvsp: ENSP00000402679.1:p.Glu835Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1364A>G
  hgvsp: ENSP00000405541.1:p.Lys456Glu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*840A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.476A>G
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15826
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29976
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9564
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu866Gly
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

22-32009372-AAGG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009372
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009369
    reference: chr 22
allele count: 2
allele frequency: 1.700275444622029e-5
allele num: 117628
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2358_2360delGAG
  hgvsp: ENSP00000383146.1:p.Arg787del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2511_2513delGAG
  hgvsp: ENSP00000402679.1:p.Arg838del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2145_2147delGAG
  hgvsp: ENSP00000397148.1:p.Arg716del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1371_1373delGAG
  hgvsp: ENSP00000405541.1:p.Gly458del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2358_2360delGAG
  hgvsp: ENSP00000416469.1:p.Arg787del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.483_485delGAG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2604_2606delGAG
  hgvsp: ENSP00000383145.2:p.Arg869del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.3995_3997delGAG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1353_1355delGAG
  hgvsp: ENSP00000398871.2:p.Arg452del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2439_2441delGAG
  hgvsp: ENSP00000443025.1:p.Arg814del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2145_2147delGAG
  hgvsp: ENSP00000401199.1:p.Arg716del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*847_*849delGAG
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29986
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9557
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15868
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg869del
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: AAGG
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD

22-32009377-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009377
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009377
    reference: chr 22
allele count: 1
allele frequency: 8.512087163772557e-6
allele num: 117480
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2510G>A
  hgvsp: ENSP00000402679.1:p.Arg837Lys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1370G>A
  hgvsp: ENSP00000405541.1:p.Gly458Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.482G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2357G>A
  hgvsp: ENSP00000416469.1:p.Arg786Lys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2438G>A
  hgvsp: ENSP00000443025.1:p.Arg813Lys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.3994G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2357G>A
  hgvsp: ENSP00000383146.1:p.Arg786Lys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2603G>A
  hgvsp: ENSP00000383145.2:p.Arg868Lys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2144G>A
  hgvsp: ENSP00000401199.1:p.Arg715Lys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*846G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1352G>A
  hgvsp: ENSP00000398871.2:p.Arg451Lys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2144G>A
  hgvsp: ENSP00000397148.1:p.Arg715Lys
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9566
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15758
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg868Lys
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

22-32009385-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009385
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009385
    reference: chr 22
allele count: 2
allele frequency: 1.710746912101824e-5
allele num: 116908
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.490A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2365A>G
  hgvsp: ENSP00000383146.1:p.Lys789Glu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1378A>G
  hgvsp: ENST00000452250.1:c.1378A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2518A>G
  hgvsp: ENSP00000402679.1:p.Lys840Glu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2152A>G
  hgvsp: ENSP00000397148.1:p.Lys718Glu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1360A>G
  hgvsp: ENSP00000398871.2:p.Lys454Glu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2365A>G
  hgvsp: ENSP00000416469.1:p.Lys789Glu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2152A>G
  hgvsp: ENSP00000401199.1:p.Lys718Glu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2446A>G
  hgvsp: ENSP00000443025.1:p.Lys816Glu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*854A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2611A>G
  hgvsp: ENSP00000383145.2:p.Lys871Glu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4002A>G
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15388
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys871Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/22-32009386-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009386
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009386
    reference: chr 22
allele count: 2
allele frequency: 1.712798026856673e-5
allele num: 116768
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2153A>C
  hgvsp: ENSP00000397148.1:p.Lys718Thr
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2519A>C
  hgvsp: ENSP00000402679.1:p.Lys840Thr
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1361A>C
  hgvsp: ENSP00000398871.2:p.Lys454Thr
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2447A>C
  hgvsp: ENSP00000443025.1:p.Lys816Thr
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1379A>C
  hgvsp: ENST00000452250.1:c.1379A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2612A>C
  hgvsp: ENSP00000383145.2:p.Lys871Thr
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2366A>C
  hgvsp: ENSP00000416469.1:p.Lys789Thr
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2366A>C
  hgvsp: ENSP00000383146.1:p.Lys789Thr
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2153A>C
  hgvsp: ENSP00000401199.1:p.Lys718Thr
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*855A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4003A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.491A>C
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29610
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9482
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys871Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum

22-32009389-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009389
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009389
    reference: chr 22
allele count: 3
allele frequency: 2.576389962384707e-5
allele num: 116442
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2156C>T
  hgvsp: ENSP00000397148.1:p.Ala719Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2369C>T
  hgvsp: ENSP00000416469.1:p.Ala790Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1382C>T
  hgvsp: ENSP00000405541.1:p.Arg462Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2522C>T
  hgvsp: ENSP00000402679.1:p.Ala841Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1364C>T
  hgvsp: ENSP00000398871.2:p.Ala455Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*858C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2369C>T
  hgvsp: ENSP00000383146.1:p.Ala790Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2615C>T
  hgvsp: ENSP00000383145.2:p.Ala872Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2450C>T
  hgvsp: ENSP00000443025.1:p.Ala817Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2156C>T
  hgvsp: ENSP00000401199.1:p.Ala719Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4006C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.494C>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15148
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29395
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala872Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: African
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

22-32009390-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009390
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009390
    reference: chr 22
allele count: 4
allele frequency: 3.436898542755018e-5
allele num: 116384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2370G>A
  hgvsp: ENST00000400289.1:c.2370G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2157G>A
  hgvsp: ENST00000443011.1:c.2157G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2451G>A
  hgvsp: ENST00000540643.1:c.2451G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1365G>A
  hgvsp: ENST00000417682.2:c.1365G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1383G>A
  hgvsp: ENSP00000405541.1:p.Arg462His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2523G>A
  hgvsp: ENST00000432498.1:c.2523G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2616G>A
  hgvsp: ENST00000400288.2:c.2616G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2157G>A
  hgvsp: ENST00000414585.1:c.2157G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*859G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.495G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2370G>A
  hgvsp: ENST00000443326.1:c.2370G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4007G>A
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1880
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1869
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9342
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg462His
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD

22-32009391-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009391
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009391
    reference: chr 22
allele count: 3
allele frequency: 2.580778362754207e-5
allele num: 116244
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2371C>T
  hgvsp: ENSP00000416469.1:p.Arg791Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2371C>T
  hgvsp: ENSP00000383146.1:p.Arg791Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*860C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2617C>T
  hgvsp: ENSP00000383145.2:p.Arg873Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2158C>T
  hgvsp: ENSP00000401199.1:p.Arg720Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.496C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1366C>T
  hgvsp: ENSP00000398871.2:p.Arg456Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2158C>T
  hgvsp: ENSP00000397148.1:p.Arg720Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2524C>T
  hgvsp: ENSP00000402679.1:p.Arg842Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1384C>T
  hgvsp: ENST00000452250.1:c.1384C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2452C>T
  hgvsp: ENSP00000443025.1:p.Arg818Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4008C>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9310
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29299
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg873Trp
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

22-32009392-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009392
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009392
    reference: chr 22
allele count: 6
allele frequency: 5.192826975005193e-5
allele num: 115544
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.497G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1385G>A
  hgvsp: ENSP00000405541.1:p.Gly463Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2159G>A
  hgvsp: ENSP00000401199.1:p.Arg720Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2372G>A
  hgvsp: ENSP00000383146.1:p.Arg791Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2453G>A
  hgvsp: ENSP00000443025.1:p.Arg818Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2618G>A
  hgvsp: ENSP00000383145.2:p.Arg873Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2372G>A
  hgvsp: ENSP00000416469.1:p.Arg791Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1367G>A
  hgvsp: ENSP00000398871.2:p.Arg456Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2159G>A
  hgvsp: ENSP00000397148.1:p.Arg720Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*861G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2525G>A
  hgvsp: ENSP00000402679.1:p.Arg842Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4009G>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9154
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28937
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14829
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg873Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

22-32009394-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009394
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009394
    reference: chr 22
allele count: 1
allele frequency: 8.654861435668416e-6
allele num: 115542
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*863C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4011C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2161C>T
  hgvsp: ENST00000414585.1:c.2161C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1387C>T
  hgvsp: ENST00000452250.1:c.1387C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2620C>T
  hgvsp: ENST00000400288.2:c.2620C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.499C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2374C>T
  hgvsp: ENST00000443326.1:c.2374C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2374C>T
  hgvsp: ENST00000400289.1:c.2374C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2527C>T
  hgvsp: ENST00000432498.1:c.2527C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2161C>T
  hgvsp: ENST00000443011.1:c.2161C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1369C>T
  hgvsp: ENST00000417682.2:c.1369C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2455C>T
  hgvsp: ENST00000540643.1:c.2455C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14923
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9092
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28962
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu874Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

22-32009396-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009396
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009396
    reference: chr 22
allele count: 1
allele frequency: 8.670019074041962e-6
allele num: 115340
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*865G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2376G>A
  hgvsp: ENST00000443326.1:c.2376G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2529G>A
  hgvsp: ENST00000432498.1:c.2529G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2163G>A
  hgvsp: ENST00000443011.1:c.2163G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2163G>A
  hgvsp: ENST00000414585.1:c.2163G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2457G>A
  hgvsp: ENST00000540643.1:c.2457G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1389G>A
  hgvsp: ENSP00000405541.1:p.Cys464Tyr
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4013G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1371G>A
  hgvsp: ENST00000417682.2:c.1371G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2376G>A
  hgvsp: ENST00000400289.1:c.2376G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.501G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2622G>A
  hgvsp: ENST00000400288.2:c.2622G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8992
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14950
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28794
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys464Tyr
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

22-32009400-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009400
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009400
    reference: chr 22
allele count: 1
allele frequency: 8.700191404210892e-6
allele num: 114940
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2380T>G
  hgvsp: ENSP00000383146.1:p.Trp794Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*869T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2461T>G
  hgvsp: ENSP00000443025.1:p.Trp821Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2167T>G
  hgvsp: ENSP00000397148.1:p.Trp723Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1393T>G
  hgvsp: ENSP00000405541.1:p.Ser465Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2626T>G
  hgvsp: ENSP00000383145.2:p.Trp876Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2380T>G
  hgvsp: ENSP00000416469.1:p.Trp794Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2533T>G
  hgvsp: ENSP00000402679.1:p.Trp845Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.505T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2167T>G
  hgvsp: ENSP00000401199.1:p.Trp723Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1375T>G
  hgvsp: ENSP00000398871.2:p.Trp459Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4017T>G
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14924
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8831
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp876Gly
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD

22-32009404-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009404
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009404
    reference: chr 22
allele count: 5
allele frequency: 4.379050621825189e-5
allele num: 114180
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2384C>T
  hgvsp: ENSP00000383146.1:p.Ala795Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1379C>T
  hgvsp: ENSP00000398871.2:p.Ala460Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2630C>T
  hgvsp: ENSP00000383145.2:p.Ala877Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2465C>T
  hgvsp: ENSP00000443025.1:p.Ala822Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1397C>T
  hgvsp: ENSP00000405541.1:p.Arg467Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.509C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2384C>T
  hgvsp: ENSP00000416469.1:p.Ala795Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*873C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2171C>T
  hgvsp: ENSP00000401199.1:p.Ala724Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2537C>T
  hgvsp: ENSP00000402679.1:p.Ala846Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2171C>T
  hgvsp: ENSP00000397148.1:p.Ala724Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4021C>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8571
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3049
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala877Val
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff

22-32009405-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009405
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009405
    reference: chr 22
allele count: 4
allele frequency: 3.506864687626028e-5
allele num: 114062
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2385G>A
  hgvsp: ENST00000443326.1:c.2385G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4022G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2466G>A
  hgvsp: ENST00000540643.1:c.2466G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2172G>A
  hgvsp: ENST00000443011.1:c.2172G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*874G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1398G>A
  hgvsp: ENSP00000405541.1:p.Arg467His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.510G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2172G>A
  hgvsp: ENST00000414585.1:c.2172G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1380G>A
  hgvsp: ENST00000417682.2:c.1380G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2385G>A
  hgvsp: ENST00000400289.1:c.2385G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2631G>A
  hgvsp: ENST00000400288.2:c.2631G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2538G>A
  hgvsp: ENST00000432498.1:c.2538G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8467
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15053
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg467His
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

22-32009407-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009407
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009407
    reference: chr 22
allele count: 1
allele frequency: 8.790745103554977e-6
allele num: 113756
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2387T>C
  hgvsp: ENSP00000383146.1:p.Leu796Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1382T>C
  hgvsp: ENSP00000398871.2:p.Leu461Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.512T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2540T>C
  hgvsp: ENSP00000402679.1:p.Leu847Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2387T>C
  hgvsp: ENSP00000416469.1:p.Leu796Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2468T>C
  hgvsp: ENSP00000443025.1:p.Leu823Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2174T>C
  hgvsp: ENSP00000397148.1:p.Leu725Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2174T>C
  hgvsp: ENSP00000401199.1:p.Leu725Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*876T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4024T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2633T>C
  hgvsp: ENSP00000383145.2:p.Leu878Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1400T>C
  hgvsp: ENSP00000405541.1:p.Ser468Pro
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27713
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3324
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu878Pro
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

22-32009408-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009408
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009408
    reference: chr 22
allele count: 8
allele frequency: 7.073386383731211e-5
allele num: 113100
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4025C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2175C>T
  hgvsp: ENST00000414585.1:c.2175C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2634C>T
  hgvsp: ENST00000400288.2:c.2634C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2469C>T
  hgvsp: ENST00000540643.1:c.2469C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1383C>T
  hgvsp: ENST00000417682.2:c.1383C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2388C>T
  hgvsp: ENST00000443326.1:c.2388C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1401C>T
  hgvsp: ENSP00000405541.1:p.Ser468Phe
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.513C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2541C>T
  hgvsp: ENST00000432498.1:c.2541C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2175C>T
  hgvsp: ENST00000443011.1:c.2175C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*877C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2388C>T
  hgvsp: ENST00000400289.1:c.2388C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14500
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8212
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27156
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser468Phe
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/22-32009417-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009417
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009417
    reference: chr 22
allele count: 1
allele frequency: 8.977305372019535e-6
allele num: 111392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2184C>A
  hgvsp: ENSP00000397148.1:p.Tyr728Ter
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2397C>A
  hgvsp: ENSP00000416469.1:p.Tyr799Ter
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1392C>A
  hgvsp: ENSP00000398871.2:p.Tyr464Ter
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2184C>A
  hgvsp: ENSP00000401199.1:p.Tyr728Ter
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4034C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2643C>A
  hgvsp: ENSP00000383145.2:p.Tyr881Ter
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2550C>A
  hgvsp: ENSP00000402679.1:p.Tyr850Ter
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2478C>A
  hgvsp: ENSP00000443025.1:p.Tyr826Ter
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1410C>A
  hgvsp: ENSP00000405541.1:p.Thr471Asn
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2397C>A
  hgvsp: ENSP00000383146.1:p.Tyr799Ter
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*886C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.522C>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14125
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25646
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7582
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3865
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr881Ter
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

22-32009417-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009417
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009417
    reference: chr 22
allele count: 5
allele frequency: 4.488652686009767e-5
allele num: 111392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1410C>T
  hgvsp: ENSP00000405541.1:p.Thr471Ile
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2397C>T
  hgvsp: ENST00000443326.1:c.2397C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2550C>T
  hgvsp: ENST00000432498.1:c.2550C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2397C>T
  hgvsp: ENST00000400289.1:c.2397C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1392C>T
  hgvsp: ENST00000417682.2:c.1392C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.522C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2643C>T
  hgvsp: ENST00000400288.2:c.2643C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2184C>T
  hgvsp: ENST00000414585.1:c.2184C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2184C>T
  hgvsp: ENST00000443011.1:c.2184C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4034C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*886C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2478C>T
  hgvsp: ENST00000540643.1:c.2478C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14125
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7582
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3865
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr471Ile
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/22-32009418-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009418
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009417
    reference: chr 22
allele count: 2
allele frequency: 1.796364158942301e-5
allele num: 111336
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*888delA
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2399delA
  hgvsp: ENSP00000383146.1:p.Gln800ArgfsTer19
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2552delA
  hgvsp: ENSP00000402679.1:p.Gln851ArgfsTer19
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2480delA
  hgvsp: ENSP00000443025.1:p.Gln827ArgfsTer19
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4036delA
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2186delA
  hgvsp: ENSP00000397148.1:p.Gln729ArgfsTer19
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2186delA
  hgvsp: ENSP00000401199.1:p.Gln729ArgfsTer19
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1412delA
  hgvsp: ENSP00000405541.1:p.Arg472GlyfsTer74
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2399delA
  hgvsp: ENSP00000416469.1:p.Gln800ArgfsTer19
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1394delA
  hgvsp: ENSP00000398871.2:p.Gln465ArgfsTer19
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2645delA
  hgvsp: ENSP00000383145.2:p.Gln882ArgfsTer19
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.524delA
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5322
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25629
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1548
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14174
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln882ArgfsTer19
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: CA
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD

22-32009429-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009429
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009429
    reference: chr 22
allele count: 1
allele frequency: 9.23122369101248e-6
allele num: 108328
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2490C>T
  hgvsp: ENST00000540643.1:c.2490C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2196C>T
  hgvsp: ENST00000414585.1:c.2196C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2562C>T
  hgvsp: ENST00000432498.1:c.2562C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*898C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1422C>T
  hgvsp: ENSP00000405541.1:p.Ser475Phe
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2409C>T
  hgvsp: ENST00000400289.1:c.2409C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1404C>T
  hgvsp: ENST00000417682.2:c.1404C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2655C>T
  hgvsp: ENST00000400288.2:c.2655C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2196C>T
  hgvsp: ENST00000443011.1:c.2196C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2409C>T
  hgvsp: ENST00000443326.1:c.2409C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4046C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.534C>T
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8053
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22369
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser475Phe
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: African
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

22-32009434-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009434
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009434
    reference: chr 22
allele count: 2
allele frequency: 1.87765218370949e-5
allele num: 106516
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2414A>T
  hgvsp: ENSP00000383146.1:p.Gln805Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2201A>T
  hgvsp: ENSP00000397148.1:p.Gln734Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2201A>T
  hgvsp: ENSP00000401199.1:p.Gln734Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1427A>T
  hgvsp: ENSP00000405541.1:p.Arg477Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4051A>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1409A>T
  hgvsp: ENSP00000398871.2:p.Gln470Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2567A>T
  hgvsp: ENSP00000402679.1:p.Gln856Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2414A>T
  hgvsp: ENSP00000416469.1:p.Gln805Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*903A>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2660A>T
  hgvsp: ENSP00000383145.2:p.Gln887Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2495A>T
  hgvsp: ENSP00000443025.1:p.Gln832Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.539A>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12976
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5830
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9703
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln887Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

22-32009438-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009438
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009438
    reference: chr 22
allele count: 2
allele frequency: 1.909271422025355e-5
allele num: 104752
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2418G>T
  hgvsp: ENSP00000416469.1:p.Glu806Asp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2205G>T
  hgvsp: ENSP00000401199.1:p.Glu735Asp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4055G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*907G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1413G>T
  hgvsp: ENSP00000398871.2:p.Glu471Asp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2418G>T
  hgvsp: ENSP00000383146.1:p.Glu806Asp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1431G>T
  hgvsp: ENSP00000405541.1:p.Arg478Met
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.543G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2499G>T
  hgvsp: ENSP00000443025.1:p.Glu833Asp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2205G>T
  hgvsp: ENSP00000397148.1:p.Glu735Asp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2664G>T
  hgvsp: ENSP00000383145.2:p.Glu888Asp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2571G>T
  hgvsp: ENSP00000402679.1:p.Glu857Asp
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11596
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18223
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11847
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6482
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu888Asp
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum

22-32009439-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009439
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009439
    reference: chr 22
allele count: 1
allele frequency: 9.678855572117152e-6
allele num: 103318
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2419G>C
  hgvsp: ENSP00000383146.1:p.Gly807Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.*908G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.544G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2419G>C
  hgvsp: ENSP00000416469.1:p.Gly807Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1414G>C
  hgvsp: ENSP00000398871.2:p.Gly472Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2572G>C
  hgvsp: ENSP00000402679.1:p.Gly858Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2206G>C
  hgvsp: ENSP00000401199.1:p.Gly736Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2206G>C
  hgvsp: ENSP00000397148.1:p.Gly736Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4056G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1432G>C
  hgvsp: ENSP00000405541.1:p.Arg478Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2665G>C
  hgvsp: ENSP00000383145.2:p.Gly889Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2500G>C
  hgvsp: ENSP00000443025.1:p.Gly834Arg
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6940
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4478
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5442
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly889Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

22-32009444-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009444
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009444
    reference: chr 22
allele count: 2
allele frequency: 1.961899903866905e-5
allele num: 101942
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1437C>G
  hgvsp: ENSP00000405541.1:p.Pro480Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2505C>G
  hgvsp: ENST00000540643.1:c.2505C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2211C>G
  hgvsp: ENST00000414585.1:c.2211C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2670C>G
  hgvsp: ENST00000400288.2:c.2670C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1419C>G
  hgvsp: ENST00000417682.2:c.1419C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2424C>G
  hgvsp: ENST00000400289.1:c.2424C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.549C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2211C>G
  hgvsp: ENST00000443011.1:c.2211C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4061C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2424C>G
  hgvsp: ENST00000443326.1:c.2424C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2577C>G
  hgvsp: ENST00000432498.1:c.2577C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5899
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7459
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3689
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11429
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14984
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro480Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

22-32009446-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009446
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009446
    reference: chr 22
allele count: 3
allele frequency: 2.960857464321668e-5
allele num: 101322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4063C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2579C>T
  hgvsp: ENSP00000402679.1:p.Thr860Met
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2213C>T
  hgvsp: ENSP00000397148.1:p.Thr738Met
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2426C>T
  hgvsp: ENSP00000383146.1:p.Thr809Met
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1439C>T
  hgvsp: ENSP00000405541.1:p.Arg481Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2507C>T
  hgvsp: ENSP00000443025.1:p.Thr836Met
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2672C>T
  hgvsp: ENSP00000383145.2:p.Thr891Met
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2213C>T
  hgvsp: ENSP00000401199.1:p.Thr738Met
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.551C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2426C>T
  hgvsp: ENSP00000416469.1:p.Thr809Met
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1421C>T
  hgvsp: ENSP00000398871.2:p.Thr474Met
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7678
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6267
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14672
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3386
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14166
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr891Met
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

22-32009447-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009447
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009447
    reference: chr 22
allele count: 7
allele frequency: 7.008129430138961e-5
allele num: 99884
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2508G>A
  hgvsp: ENST00000540643.1:c.2508G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1422G>A
  hgvsp: ENST00000417682.2:c.1422G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2214G>A
  hgvsp: ENST00000443011.1:c.2214G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2214G>A
  hgvsp: ENST00000414585.1:c.2214G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1440G>A
  hgvsp: ENSP00000405541.1:p.Arg481His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.552G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2427G>A
  hgvsp: ENST00000443326.1:c.2427G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2673G>A
  hgvsp: ENST00000400288.2:c.2673G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4064G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2580G>A
  hgvsp: ENST00000432498.1:c.2580G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2427G>A
  hgvsp: ENST00000400289.1:c.2427G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15506
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7048
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12679
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8060
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11554
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg481His
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

22-32009448-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009448
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009448
    reference: chr 22
allele count: 16
allele frequency: 1.603399206317393e-4
allele num: 99788
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2674C>T
  hgvsp: ENSP00000383145.2:p.Arg892Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2215C>T
  hgvsp: ENSP00000397148.1:p.Arg739Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4065C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2581C>T
  hgvsp: ENSP00000402679.1:p.Arg861Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2428C>T
  hgvsp: ENSP00000383146.1:p.Arg810Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.553C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1423C>T
  hgvsp: ENSP00000398871.2:p.Arg475Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2428C>T
  hgvsp: ENSP00000416469.1:p.Arg810Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2215C>T
  hgvsp: ENSP00000401199.1:p.Arg739Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2509C>T
  hgvsp: ENSP00000443025.1:p.Arg837Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1441C>T
  hgvsp: ENST00000452250.1:c.1441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6975
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8121
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11754
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12582
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15512
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg892Trp
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff

22-32009449-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009449
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009449
    reference: chr 22
allele count: 1
allele frequency: 1.001522313917154e-5
allele num: 99848
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2429G>A
  hgvsp: ENSP00000383146.1:p.Arg810Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1424G>A
  hgvsp: ENSP00000398871.2:p.Arg475Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2582G>A
  hgvsp: ENSP00000402679.1:p.Arg861Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4066G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2216G>A
  hgvsp: ENSP00000397148.1:p.Arg739Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2510G>A
  hgvsp: ENSP00000443025.1:p.Arg837Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2429G>A
  hgvsp: ENSP00000416469.1:p.Arg810Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.554G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1442G>A
  hgvsp: ENSP00000405541.1:p.Gly482Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2216G>A
  hgvsp: ENSP00000401199.1:p.Arg739Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2675G>A
  hgvsp: ENSP00000383145.2:p.Arg892Gln
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6873
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15555
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg892Gln
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP

22-32009453-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009453
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009453
    reference: chr 22
allele count: 4
allele frequency: 4.050468841768435e-5
allele num: 98754
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1446C>T
  hgvsp: ENSP00000405541.1:p.Ser483Phe
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2220C>T
  hgvsp: ENST00000443011.1:c.2220C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2514C>T
  hgvsp: ENST00000540643.1:c.2514C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2220C>T
  hgvsp: ENST00000414585.1:c.2220C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.558C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2679C>T
  hgvsp: ENST00000400288.2:c.2679C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2433C>T
  hgvsp: ENST00000443326.1:c.2433C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1428C>T
  hgvsp: ENST00000417682.2:c.1428C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2586C>T
  hgvsp: ENST00000432498.1:c.2586C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2433C>T
  hgvsp: ENST00000400289.1:c.2433C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4070C>T
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11909
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16277
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1998
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7459
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8640
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11058
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser483Phe
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

22-32009455-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009455
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009455
    reference: chr 22
allele count: 118
allele frequency: 1.203565818730748e-3
allele num: 98042
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1430T>G
  hgvsp: ENSP00000398871.2:p.Leu477Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2516T>G
  hgvsp: ENSP00000443025.1:p.Leu839Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2222T>G
  hgvsp: ENSP00000397148.1:p.Leu741Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4072T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.560T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1448T>G
  hgvsp: ENSP00000405541.1:p.Cys484Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2222T>G
  hgvsp: ENSP00000401199.1:p.Leu741Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2588T>G
  hgvsp: ENSP00000402679.1:p.Leu863Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2435T>G
  hgvsp: ENSP00000416469.1:p.Leu812Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2681T>G
  hgvsp: ENSP00000383145.2:p.Leu894Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2435T>G
  hgvsp: ENSP00000383146.1:p.Leu812Arg
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16513
  bin: 1.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 8882
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11922
  bin: 2.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 3.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7700
  bin: 1.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10415
  bin: 2.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
hgvs: p.Leu894Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

22-32009457-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009457
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009457
    reference: chr 22
allele count: 2
allele frequency: 2.076843198338526e-5
allele num: 96300
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.562C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2224C>T
  hgvsp: ENSP00000397148.1:p.Arg742Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2437C>T
  hgvsp: ENSP00000416469.1:p.Arg813Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1432C>T
  hgvsp: ENSP00000398871.2:p.Arg478Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2590C>T
  hgvsp: ENSP00000402679.1:p.Arg864Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2683C>T
  hgvsp: ENSP00000383145.2:p.Arg895Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2437C>T
  hgvsp: ENSP00000383146.1:p.Arg813Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4074C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2224C>T
  hgvsp: ENSP00000401199.1:p.Arg742Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1450C>T
  hgvsp: ENST00000452250.1:c.1450C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2518C>T
  hgvsp: ENSP00000443025.1:p.Arg840Cys
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7954
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16779
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12126
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9454
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg895Cys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD

22-32009458-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009458
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009458
    reference: chr 22
allele count: 5
allele frequency: 5.179307630156001e-5
allele num: 96538
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2225G>A
  hgvsp: ENSP00000401199.1:p.Arg742His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4075G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2438G>A
  hgvsp: ENSP00000416469.1:p.Arg813His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2684G>A
  hgvsp: ENSP00000383145.2:p.Arg895His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2225G>A
  hgvsp: ENSP00000397148.1:p.Arg742His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2438G>A
  hgvsp: ENSP00000383146.1:p.Arg813His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2519G>A
  hgvsp: ENSP00000443025.1:p.Arg840His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1433G>A
  hgvsp: ENSP00000398871.2:p.Arg478His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2591G>A
  hgvsp: ENSP00000402679.1:p.Arg864His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1451G>A
  hgvsp: ENSP00000405541.1:p.Ala485Thr
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.563G>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9373
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9298
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16874
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7705
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Arg895His
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum

22-32009471-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009471
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009471
    reference: chr 22
allele count: 18
allele frequency: 1.920450665756231e-4
allele num: 93728
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1464C>T
  hgvsp: ENSP00000405541.1:p.Ala489Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.576C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1446C>T
  hgvsp: ENST00000417682.2:c.1446C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2697C>T
  hgvsp: ENST00000400288.2:c.2697C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2238C>T
  hgvsp: ENST00000414585.1:c.2238C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2451C>T
  hgvsp: ENST00000443326.1:c.2451C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2238C>T
  hgvsp: ENST00000443011.1:c.2238C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2532C>T
  hgvsp: ENST00000540643.1:c.2532C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4088C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2604C>T
  hgvsp: ENST00000432498.1:c.2604C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2451C>T
  hgvsp: ENST00000400289.1:c.2451C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8484
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11108
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10467
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18695
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6953
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala489Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

22-32009472-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009472
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009472
    reference: chr 22
allele count: 2
allele frequency: 2.133515393313563e-5
allele num: 93742
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2452A>G
  hgvsp: ENSP00000416469.1:p.Met818Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2533A>G
  hgvsp: ENSP00000443025.1:p.Met845Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2239A>G
  hgvsp: ENSP00000397148.1:p.Met747Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2239A>G
  hgvsp: ENSP00000401199.1:p.Met747Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2605A>G
  hgvsp: ENSP00000402679.1:p.Met869Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2452A>G
  hgvsp: ENSP00000383146.1:p.Met818Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.577A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.1465A>G
  hgvsp: ENST00000452250.1:c.1465A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4089A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1447A>G
  hgvsp: ENSP00000398871.2:p.Met483Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2698A>G
  hgvsp: ENSP00000383145.2:p.Met900Val
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10550
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2554
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8519
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18824
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met900Val
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: A
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

22-32009478-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009478
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009478
    reference: chr 22
allele count: 1
allele frequency: 1.088305073678253e-5
allele num: 91886
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2245G>T
  hgvsp: ENSP00000397148.1:p.Ala749Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2458G>T
  hgvsp: ENSP00000416469.1:p.Ala820Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2539G>T
  hgvsp: ENSP00000443025.1:p.Ala847Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4095G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2245G>T
  hgvsp: ENSP00000401199.1:p.Ala749Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2611G>T
  hgvsp: ENSP00000402679.1:p.Ala871Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.583G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2704G>T
  hgvsp: ENSP00000383145.2:p.Ala902Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2458G>T
  hgvsp: ENSP00000383146.1:p.Ala820Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*3G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1453G>T
  hgvsp: ENSP00000398871.2:p.Ala485Ser
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9485
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2820
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11045
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9685
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19490
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala902Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

22-32009481-TCCCGGCAGCAGCTGCAGG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009481
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009463
    reference: chr 22
allele count: 135
allele frequency: 1.47977638934561e-3
allele num: 91230
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsp: ENSP00000398871.2:p.Arg487_Ala492del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsp: ENSP00000402679.1:p.Arg873_Ala878del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsp: ENSP00000443025.1:p.Arg849_Ala854del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsp: ENSP00000416469.1:p.Arg822_Ala827del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsp: ENSP00000397148.1:p.Arg751_Ala756del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsp: ENSP00000383146.1:p.Arg822_Ala827del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsp: ENSP00000401199.1:p.Arg751_Ala756del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsp: ENSP00000383145.2:p.Arg904_Ala909del
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11236
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9720
  bin: 1.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9307
  bin: 2.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 5528
  bin: 2.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 3.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 19703
  bin: 1.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1420
  bin: 1.75e1
  variant carriers: 1
hgvs: p.Arg904_Ala909del
num of homozygotes: 1
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: TCCCGGCAGCAGCTGCAGG
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

22-32009482-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009482
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009482
    reference: chr 22
allele count: 0
allele frequency: 0.0e0
allele num: 90512
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4099C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2615C>G
  hgvsp: ENSP00000402679.1:p.Ser872Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1457C>G
  hgvsp: ENSP00000398871.2:p.Ser486Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2462C>G
  hgvsp: ENSP00000383146.1:p.Ser821Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2543C>G
  hgvsp: ENSP00000443025.1:p.Ser848Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2249C>G
  hgvsp: ENSP00000401199.1:p.Ser750Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*7C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2249C>G
  hgvsp: ENSP00000397148.1:p.Ser750Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2462C>G
  hgvsp: ENSP00000416469.1:p.Ser821Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2708C>G
  hgvsp: ENSP00000383145.2:p.Ser903Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.587C>G
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9799
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19733
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11333
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9133
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser903Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP

22-32009485-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009485
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009485
    reference: chr 22
allele count: 0
allele frequency: 0.0e0
allele num: 89244
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2711G>A
  hgvsp: ENSP00000383145.2:p.Arg904Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.590G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*10G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2465G>A
  hgvsp: ENSP00000383146.1:p.Arg822Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2252G>A
  hgvsp: ENSP00000397148.1:p.Arg751Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2618G>A
  hgvsp: ENSP00000402679.1:p.Arg873Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2465G>A
  hgvsp: ENSP00000416469.1:p.Arg822Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1460G>A
  hgvsp: ENSP00000398871.2:p.Arg487Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2546G>A
  hgvsp: ENSP00000443025.1:p.Arg849Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4102G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2252G>A
  hgvsp: ENSP00000401199.1:p.Arg751Gln
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3056
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11708
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8766
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19938
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10005
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg904Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP

22-32009486-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009486
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009486
    reference: chr 22
allele count: 1
allele frequency: 1.129101461057291e-5
allele num: 88566
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1461G>A
  hgvsp: ENST00000417682.2:c.1461G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2253G>A
  hgvsp: ENST00000414585.1:c.2253G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2466G>A
  hgvsp: ENST00000400289.1:c.2466G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2466G>A
  hgvsp: ENST00000443326.1:c.2466G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2712G>A
  hgvsp: ENST00000400288.2:c.2712G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2619G>A
  hgvsp: ENST00000432498.1:c.2619G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2547G>A
  hgvsp: ENST00000540643.1:c.2547G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*11G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2253G>A
  hgvsp: ENST00000443011.1:c.2253G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4103G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.591G>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20014
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4653
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10266
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11861
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg904Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

22-32009489-GCAGCTGCAGGCC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009489
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009477
    reference: chr 22
allele count: 0
allele frequency: 0.0e0
allele num: 88406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsp: ENSP00000383146.1:p.Leu825_Gln828del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsp: ENSP00000383145.2:p.Leu907_Gln910del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsp: ENSP00000397148.1:p.Leu754_Gln757del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsp: ENSP00000402679.1:p.Leu876_Gln879del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsp: ENSP00000401199.1:p.Leu754_Gln757del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsp: ENSP00000443025.1:p.Leu852_Gln855del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsp: ENSP00000416469.1:p.Leu825_Gln828del
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsp: ENSP00000398871.2:p.Leu490_Gln493del
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10030
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12091
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20075
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4465
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8651
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6289
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu907_Gln910del
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: GCAGCTGCAGGCC
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

22-32009492-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009492
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009492
    reference: chr 22
allele count: 1
allele frequency: 1.129177958446251e-5
allele num: 88560
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2259G>C
  hgvsp: ENSP00000397148.1:p.Gln753His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*17G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1467G>C
  hgvsp: ENSP00000398871.2:p.Gln489His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.597G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2553G>C
  hgvsp: ENSP00000443025.1:p.Gln851His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2625G>C
  hgvsp: ENSP00000402679.1:p.Gln875His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2472G>C
  hgvsp: ENSP00000383146.1:p.Gln824His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2718G>C
  hgvsp: ENSP00000383145.2:p.Gln906His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2472G>C
  hgvsp: ENSP00000416469.1:p.Gln824His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4109G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2259G>C
  hgvsp: ENSP00000401199.1:p.Gln753His
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8972
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9636
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4388
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln906His
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

22-32009493-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009493
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009493
    reference: chr 22
allele count: 1
allele frequency: 1.13401828037468e-5
allele num: 88182
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2473C>G
  hgvsp: ENSP00000383146.1:p.Leu825Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2554C>G
  hgvsp: ENSP00000443025.1:p.Leu852Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2473C>G
  hgvsp: ENSP00000416469.1:p.Leu825Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.598C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2626C>G
  hgvsp: ENSP00000402679.1:p.Leu876Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1468C>G
  hgvsp: ENSP00000398871.2:p.Leu490Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*18C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2719C>G
  hgvsp: ENSP00000383145.2:p.Leu907Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4110C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2260C>G
  hgvsp: ENSP00000397148.1:p.Leu754Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2260C>G
  hgvsp: ENSP00000401199.1:p.Leu754Val
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12334
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8880
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9678
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu907Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/22-32009509-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009509
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009509
    reference: chr 22
allele count: 2
allele frequency: 2.338962436263274e-5
allele num: 85508
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2489A>C
  hgvsp: ENSP00000383146.1:p.Gln830Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2735A>C
  hgvsp: ENSP00000383145.2:p.Gln912Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2489A>C
  hgvsp: ENSP00000416469.1:p.Gln830Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.614A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*34A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4126A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2570A>C
  hgvsp: ENSP00000443025.1:p.Gln857Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2276A>C
  hgvsp: ENSP00000401199.1:p.Gln759Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2276A>C
  hgvsp: ENSP00000397148.1:p.Gln759Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1484A>C
  hgvsp: ENSP00000398871.2:p.Gln495Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2642A>C
  hgvsp: ENSP00000402679.1:p.Gln881Pro
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7929
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20673
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13684
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln912Pro
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ

22-32009509-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009509
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009509
    reference: chr 22
allele count: 1
allele frequency: 1.169481218131637e-5
allele num: 85508
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2735A>G
  hgvsp: ENSP00000383145.2:p.Gln912Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2489A>G
  hgvsp: ENSP00000416469.1:p.Gln830Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2276A>G
  hgvsp: ENSP00000401199.1:p.Gln759Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1484A>G
  hgvsp: ENSP00000398871.2:p.Gln495Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*34A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2489A>G
  hgvsp: ENSP00000383146.1:p.Gln830Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2276A>G
  hgvsp: ENSP00000397148.1:p.Gln759Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.614A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2642A>G
  hgvsp: ENSP00000402679.1:p.Gln881Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2570A>G
  hgvsp: ENSP00000443025.1:p.Gln857Arg
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4126A>G
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13684
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7929
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20673
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10125
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln912Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

22-32009513-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009513
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009513
    reference: chr 22
allele count: 30
allele frequency: 3.558634433346777e-4
allele num: 84302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2280C>T
  hgvsp: ENST00000443011.1:c.2280C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1488C>T
  hgvsp: ENST00000417682.2:c.1488C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2493C>T
  hgvsp: ENST00000443326.1:c.2493C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2646C>T
  hgvsp: ENST00000432498.1:c.2646C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4130C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2739C>T
  hgvsp: ENST00000400288.2:c.2739C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2574C>T
  hgvsp: ENST00000540643.1:c.2574C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2493C>T
  hgvsp: ENST00000400289.1:c.2493C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2280C>T
  hgvsp: ENST00000414585.1:c.2280C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*38C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.618C>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3104
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13873
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 20592
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7779
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10197
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val913Val
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

22-32009515-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009515
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009514
    reference: chr 22
allele count: 3
allele frequency: 3.541661747692017e-5
allele num: 84706
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2649+1delG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2742+1delG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1491+1delG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2496+1delG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4133+1delG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*41+1delG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2283+1delG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2496+1delG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2283+1delG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2577+1delG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.621+1delG
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20443
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13987
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3245
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3088
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9901
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: AG
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

22-32009519-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009519
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009519
    reference: chr 22
allele count: 1
allele frequency: 1.172113085470486e-5
allele num: 85316
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2283+3A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2649+3A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2496+3A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2283+3A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.621+3A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*41+3A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1491+3A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2496+3A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2742+3A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2577+3A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4133+3A>G
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9054
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.2742+3A>G
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

22-32009521-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009521
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009521
    reference: chr 22
allele count: 116
allele frequency: 1.367344052053373e-3
allele num: 84836
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2283+5G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2742+5G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2496+5G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*41+5G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2283+5G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2496+5G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.621+5G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2577+5G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4133+5G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1491+5G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2649+5G>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3094
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20105
  bin: 1.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 14212
  bin: 7.5e0
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 9228
  bin: 2.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 9205
  bin: 1.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.2742+5G>A
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP

22-32009523-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009523
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009523
    reference: chr 22
allele count: 8
allele frequency: 9.419521959260567e-5
allele num: 84930
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2742+7C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*41+7C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2283+7C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2577+7C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2649+7C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2496+7C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2496+7C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2283+7C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4133+7C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1491+7C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.621+7C>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3049
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14262
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19948
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9692
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.2742+7C>T
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum

22-32009531-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009531
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009531
    reference: chr 22
allele count: 2
allele frequency: 2.342084923999344e-5
allele num: 85394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2649+15C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*41+15C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2283+15C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2742+15C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2283+15C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2496+15C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4133+15C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1491+15C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2496+15C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2577+15C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.621+15C>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7741
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14355
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11732
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18986
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2816
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

22-32009533-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009533
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009533
    reference: chr 22
allele count: 2
allele frequency: 2.334485012606219e-5
allele num: 85672
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1491+17T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.621+17T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4133+17T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2496+17T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2649+17T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*41+17T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2577+17T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2742+17T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2283+17T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2496+17T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2283+17T>C
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2765
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12503
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3417
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18648
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 1
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

22-32009535-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009535
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009535
    reference: chr 22
allele count: 1
allele frequency: 1.16721525783785e-5
allele num: 85674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*41+19C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2496+19C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2577+19C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.621+19C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2742+19C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2283+19C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4133+19C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1491+19C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2649+19C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2283+19C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2496+19C>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6965
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13237
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14308
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21428
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

22-32009543-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009543
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009543
    reference: chr 22
allele count: 1
allele frequency: 1.152047187852814e-5
allele num: 86802
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*41+27G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.621+27G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1491+27G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2577+27G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2283+27G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2649+27G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2742+27G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2496+27G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2496+27G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2283+27G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4133+27G>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16750
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14099
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15527
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1308
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

22-32009543-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009543
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009543
    reference: chr 22
allele count: 1
allele frequency: 1.152047187852814e-5
allele num: 86802
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2283+27G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*41+27G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2496+27G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4133+27G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2496+27G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2742+27G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1491+27G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2283+27G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2649+27G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2577+27G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.621+27G>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15527
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16750
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14099
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20579
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD

22-32009545-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009545
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009545
    reference: chr 22
allele count: 1
allele frequency: 1.150827444932907e-5
allele num: 86894
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2742+29G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.621+29G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4133+29G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2283+29G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1491+29G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*41+29G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2577+29G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2496+29G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2283+29G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2496+29G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2649+29G>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16492
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14035
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3932
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2554
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5092
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

22-32009552-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009552
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009552
    reference: chr 22
allele count: 2
allele frequency: 2.276400555441736e-5
allele num: 87858
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.621+36G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2742+36G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2283+36G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2577+36G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2496+36G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1491+36G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*41+36G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2649+36G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4133+36G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2496+36G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2283+36G>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15427
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17258
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4303
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5793
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13751
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

22-32009552-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009552
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009552
    reference: chr 22
allele count: 1
allele frequency: 1.138200277720868e-5
allele num: 87858
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.621+36G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2496+36G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4133+36G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1491+36G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2649+36G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2496+36G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2283+36G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2283+36G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*41+36G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2742+36G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2577+36G>C
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5793
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4303
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17258
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13751
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15427
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

22-32009554-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009554
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009554
    reference: chr 22
allele count: 6
allele frequency: 6.801641462806357e-5
allele num: 88214
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2497-34G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2497-34G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2743-34G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*42-34G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1492-34G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2284-34G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4134-34G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.622-34G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2578-34G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2284-34G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2650-34G>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13667
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15098
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4381
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17628
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5795
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19544
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum

22-32009557-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009557
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009557
    reference: chr 22
allele count: 20
allele frequency: 2.256266780984184e-4
allele num: 88642
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2497-31T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2497-31T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1492-31T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*42-31T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2284-31T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.622-31T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2743-31T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4134-31T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2650-31T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2284-31T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2578-31T>G
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14935
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4510
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17693
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 9.75e1
  variant carriers: 20
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

22-32009560-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009560
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009560
    reference: chr 22
allele count: 1
allele frequency: 1.123772278785427e-5
allele num: 88986
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*42-28C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2284-28C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1492-28C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.622-28C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2497-28C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2284-28C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2497-28C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4134-28C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2650-28C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2743-28C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2578-28C>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5986
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14551
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4730
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18125
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS

22-32009567-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009567
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009567
    reference: chr 22
allele count: 3
allele frequency: 3.334667200213418e-5
allele num: 89964
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2743-21T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2497-21T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2650-21T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2578-21T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2284-21T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.622-21T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2284-21T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*42-21T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4134-21T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2497-21T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1492-21T>G
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5769
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4976
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19162
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12926
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13810
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2391
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

22-32009573-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009573
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009573
    reference: chr 22
allele count: 1
allele frequency: 1.099819629580749e-5
allele num: 90924
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2284-15G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2743-15G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2497-15G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2578-15G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2497-15G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*42-15G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4134-15G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2284-15G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1492-15G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2650-15G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.622-15G>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19944
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12472
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2290
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17400
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

22-32009573-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32009573
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 32009573
    reference: chr 22
allele count: 6
allele frequency: 6.598917777484493e-5
allele num: 90924
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000495107
  gene symbol: SFI1
  hgvsc: ENST00000495107.1:n.622-15G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000398871
  ensembl transcript: ENST00000417682
  gene symbol: SFI1
  hgvsc: ENST00000417682.2:c.1492-15G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.2497-15G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.2284-15G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.2497-15G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.2650-15G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.2743-15G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.2284-15G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000405541
  ensembl transcript: ENST00000452250
  gene symbol: SFI1
  hgvsc: ENST00000452250.1:c.*42-15G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.4134-15G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.2578-15G>C
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2290
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 15536
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 954
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1268
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 365
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 32
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 592
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1942
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42323
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1899
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8477
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1563
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 744
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 535
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6186
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9598
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.778337531486146e-4
allele num: 15880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65200
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.571358e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
SIO_000300: 2.45e0

MQRankSum
type: SiteQuality
SIO_000300: -1.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.427e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.41e-1

QD
type: SiteQuality
SIO_000300: 8.91e0

GenotypeDepth
all individuals: 94
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 52
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 364
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41979
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1924
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1892
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1551
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8446
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65122
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.084636230977694e-4
allele num: 9594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6178
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

MQRankSum
type: SiteQuality
SIO_000300: 3.06e-1

FS
type: SiteQuality
SIO_000300: 4.17e-1

MQ
type: SiteQuality
SIO_000300: 5.931e1

VQSLOD
type: SiteQuality
SIO_000300: 4.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

QD
type: SiteQuality
SIO_000300: 1.05e1

DP
type: SiteQuality
SIO_000300: 1.571845e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.221e0

GenotypeDepth
all individuals: 11
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 150
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1167
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1935
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42521
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1892
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8450
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1549
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 196
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6176
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.13986615091791e-5
allele num: 65148
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15948
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0276e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.09e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

VQSLOD
type: SiteQuality
SIO_000300: -1.272e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e0

MQRankSum
type: SiteQuality
SIO_000300: -7.8e-1

DP
type: SiteQuality
SIO_000300: 1.576654e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.98e0

QD
type: SiteQuality
SIO_000300: 1.139e1

GenotypeDepth
all individuals: 15692
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42867
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1892
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 52
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8482
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1939
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1559
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65174
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6174
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15968
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9590
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16767865483419e-4
allele num: 8564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.577572e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

MQ
type: SiteQuality
SIO_000300: 5.95e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.57e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.48e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.01e-1

FS
type: SiteQuality
SIO_000300: 4.098e0

QD
type: SiteQuality
SIO_000300: 1.234e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.46e-1

GenotypeDepth
all individuals: 316
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 47
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 8481
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1878
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43694
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1867
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 732
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 132
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1525
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 7.032348804500703e-4
allele num: 8532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65086
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6130
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16154
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.909e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

QD
type: SiteQuality
SIO_000300: 1.119e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.94e-1

FS
type: SiteQuality
SIO_000300: 5.056e0

VQSLOD
type: SiteQuality
SIO_000300: -1.383e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

DP
type: SiteQuality
SIO_000300: 1.583695e6

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 148
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1853
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43472
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1942
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8452
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1515
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6098
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538414202639919e-5
allele num: 65002
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.582435e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.91e-1

FS
type: SiteQuality
SIO_000300: 1.664e0

MQ
type: SiteQuality
SIO_000300: 5.87e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.312e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.4e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.21e0

GenotypeDepth
all individuals: 31
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 46
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1856
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1516
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 268
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1949
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8457
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43641
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.63826998689384e-4
allele num: 6104
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538224888478696e-5
allele num: 65010
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.64e0

MQ
type: SiteQuality
SIO_000300: 5.713e1

DP
type: SiteQuality
SIO_000300: 1.582827e6

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

MQRankSum
type: SiteQuality
SIO_000300: -1.407e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 5.173e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.73e-1

QD
type: SiteQuality
SIO_000300: 1.558e1

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2083
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1835
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43603
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 725
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8415
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1510
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6078
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64910
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.156119182467373e-5
allele num: 16244
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.01e-1

DP
type: SiteQuality
SIO_000300: 1.581199e6

MQ
type: SiteQuality
SIO_000300: 5.951e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.28e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.75e-1

QD
type: SiteQuality
SIO_000300: 1.131e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.537e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.01e-1

GenotypeDepth
all individuals: 147
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 52
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 47
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 9488
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 725
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 528
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8349
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43018
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2561
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1827
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1497
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9372
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16250
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6002
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.757778168395148e-4
allele num: 11378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.7e0

FS
type: SiteQuality
SIO_000300: 5.006e0

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e-1

QD
type: SiteQuality
SIO_000300: 1.501e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

DP
type: SiteQuality
SIO_000300: 1.570366e6

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 147
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 164
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1494
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2622
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42797
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1823
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8335
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 725
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5998
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9336
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16246
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.759014951627089e-4
allele num: 11370
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.049e0

MQRankSum
type: SiteQuality
SIO_000300: -9.3e-2

QD
type: SiteQuality
SIO_000300: 1.529e1

FS
type: SiteQuality
SIO_000300: 6.561e0

DP
type: SiteQuality
SIO_000300: 1.567993e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.78e-1

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 52
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9401
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42311
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1477
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2906
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8284
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1809
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.663889061625521e-5
allele num: 64324
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5942
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16244
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9294
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-2

DP
type: SiteQuality
SIO_000300: 1.561013e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.590000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.55e0

FS
type: SiteQuality
SIO_000300: 2.68e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.28e-1

GenotypeDepth
all individuals: 17
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 52
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3036
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1807
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42250
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 522
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 725
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1477
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8284
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555209953343701e-5
allele num: 64300
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.182312603452353e-4
allele num: 8458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.07781849536538e-4
allele num: 9278
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11332
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.15839389087326e-5
allele num: 16238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5936
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.558278e6

MQRankSum
type: SiteQuality
SIO_000300: 4.45e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.147e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.793e0

QD
type: SiteQuality
SIO_000300: 1.184e1

GenotypeDepth
all individuals: 12
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 52
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8254
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3127
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 447
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1796
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42140
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1469
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11322
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.182872013248167e-4
allele num: 8454
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.160670280926565e-5
allele num: 16232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5910
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.55724430048586e-5
allele num: 64216
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.15e0

MQRankSum
type: SiteQuality
SIO_000300: -2.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.14e-1

DP
type: SiteQuality
SIO_000300: 1.555881e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.41e0

VQSLOD
type: SiteQuality
SIO_000300: 4.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

GenotypeDepth
all individuals: 339
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 147
bin: 4.75e1
variant carriers: 2

GenotypeDepth
all individuals: 11
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7918
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3552
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1402
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 502
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40976
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.834043619954876e-5
allele num: 63824
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.866820358219543e-5
allele num: 11278
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16190
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9166
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5834
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8408
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.44e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.01e-1

DP
type: SiteQuality
SIO_000300: 1.541977e6

FS
type: SiteQuality
SIO_000300: 2.537e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -9.68e-1

QD
type: SiteQuality
SIO_000300: 9.98e0

GenotypeDepth
all individuals: 329
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1399
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3597
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1732
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41355
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7892
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 718
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 225
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8404
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.173601679219657e-5
allele num: 16198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63824
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11282
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5826
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9164
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.174e0

MQ
type: SiteQuality
SIO_000300: 5.929e1

FS
type: SiteQuality
SIO_000300: 2.311e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.172e0

QD
type: SiteQuality
SIO_000300: 1.193e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.59e-1

DP
type: SiteQuality
SIO_000300: 1.540356e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

GenotypeDepth
all individuals: 31
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 752
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3772
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 718
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7848
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41207
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1722
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1393
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11266
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16184
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5810
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.192748091603053e-4
allele num: 8384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63736
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

QD
type: SiteQuality
SIO_000300: 7.21e0

MQRankSum
type: SiteQuality
SIO_000300: 6.42e-1

DP
type: SiteQuality
SIO_000300: 1.534715e6

FS
type: SiteQuality
SIO_000300: 2.921e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.95e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.244e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 28584
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 141
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4052
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41121
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1696
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1359
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7802
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.747640685075148e-4
allele num: 5722
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16156
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9088
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11228
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e0

VQSLOD
type: SiteQuality
SIO_000300: 4.7e-1

DP
type: SiteQuality
SIO_000300: 1.526288e6

MQRankSum
type: SiteQuality
SIO_000300: -3.68e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.74e-1

QD
type: SiteQuality
SIO_000300: 1.12e1

GenotypeDepth
all individuals: 31
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 12
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40003
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7579
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4642
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1652
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 9.75e1
variant carriers: 5

Latino
type: Population
allele count: 1
allele frequency: 8.960573476702509e-5
allele num: 11160
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16098
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.337938902268983e-5
allele num: 63112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8988
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5664
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.267e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.98e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

VQSLOD
type: SiteQuality
SIO_000300: 8.090000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.28e0

FS
type: SiteQuality
SIO_000300: 1.262e0

DP
type: SiteQuality
SIO_000300: 1.509516e6

MQRankSum
type: SiteQuality
SIO_000300: -3.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

GenotypeDepth
all individuals: 12
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27933
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40313
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1283
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7507
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4686
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1634
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.405002405002405e-4
allele num: 8316
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8976
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63052
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.96700143472023e-5
allele num: 11152
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.215040397762585e-5
allele num: 16090
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5648
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

DP
type: SiteQuality
SIO_000300: 1.507964e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.022e0

FS
type: SiteQuality
SIO_000300: 1.536e0

MQRankSum
type: SiteQuality
SIO_000300: -2.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.56e-1

QD
type: SiteQuality
SIO_000300: 1.0e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-2

GenotypeDepth
all individuals: 52
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7456
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39972
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1621
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5030
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 695
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 629
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1250
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16074
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.59073555612115e-5
allele num: 62864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5622
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8944
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -9.03e-1

DP
type: SiteQuality
SIO_000300: 1.499298e6

FS
type: SiteQuality
SIO_000300: 2.449e0

MQRankSum
type: SiteQuality
SIO_000300: 7.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.4e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 5.01e-1

QD
type: SiteQuality
SIO_000300: 9.890000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e-1

GenotypeDepth
all individuals: 46
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 52
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3909
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1554
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38430
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7092
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 695
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1212
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 909
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 739
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5622
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8874
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.69227041434456e-4
allele num: 8254
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11036
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16028
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62526
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.084e1

DP
type: SiteQuality
SIO_000300: 1.482486e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.093e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.8e-2

GenotypeDepth
all individuals: 268
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1065
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1411
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7182
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1295
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6585
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 565
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36956
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8144
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10866
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.624537006953018e-5
allele num: 61556
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.4e-2

DP
type: SiteQuality
SIO_000300: 1.437608e6

QD
type: SiteQuality
SIO_000300: 1.292e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e-1

FS
type: SiteQuality
SIO_000300: 4.064e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.271e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

GenotypeDepth
all individuals: 17
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 135
bin: 4.75e1
variant carriers: 2

GenotypeDepth
all individuals: 25646
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 10
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7182
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1295
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 565
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1065
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1411
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6585
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36956
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8714
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8144
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 5.516734093416697e-4
allele num: 5438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.249074013906037e-5
allele num: 61556
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

FS
type: SiteQuality
SIO_000300: 4.064e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.271e0

MQRankSum
type: SiteQuality
SIO_000300: -9.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

QD
type: SiteQuality
SIO_000300: 1.292e1

DP
type: SiteQuality
SIO_000300: 1.437608e6

GenotypeDepth
all individuals: 12
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7558
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 106
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 45
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7228
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1053
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1293
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6560
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 495
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37302
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1389
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.249496328069149e-5
allele num: 61548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8702
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10854
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8136
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.98e-1

DP
type: SiteQuality
SIO_000300: 1.436826e6

FS
type: SiteQuality
SIO_000300: 5.605e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.875e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.64e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

MQ
type: SiteQuality
SIO_000300: 6.063e1

QD
type: SiteQuality
SIO_000300: 1.325e1

GenotypeDepth
all individuals: 17
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 228
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 89
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5715
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10062
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2013
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 972
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1875
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33301
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1046
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1127
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.667222407469156e-5
allele num: 59980
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8404
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.216e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.281e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

VQSLOD
type: SiteQuality
SIO_000300: -1.629e0

QD
type: SiteQuality
SIO_000300: 8.84e0

MQRankSum
type: SiteQuality
SIO_000300: -2.105e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.347991e6

GenotypeDepth
all individuals: 104
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 124
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2471
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1294
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1218
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30879
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 100
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11548
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5227
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2451
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1031
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59030
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7716
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.295001295001295e-4
allele num: 15444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5064
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8250
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.3e0

VQSLOD
type: SiteQuality
SIO_000300: 7.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.94e-1

FS
type: SiteQuality
SIO_000300: 4.262e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.531e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.75e-1

DP
type: SiteQuality
SIO_000300: 1.297863e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.48e-1

GenotypeDepth
all individuals: 105
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 45
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4881
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 595
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3280
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1756
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13187
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1454
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 955
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3131
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27121
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7570
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.474022761009402e-4
allele num: 8084
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58068
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10026
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4936
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.443e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.75e-1

QD
type: SiteQuality
SIO_000300: 1.239e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 5.385e0

VQSLOD
type: SiteQuality
SIO_000300: 9.26e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.239979e6

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-2

GenotypeDepth
all individuals: 17
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1279
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3895
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2222
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3856
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13958
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23282
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1619
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3605
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 801
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 973
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1352
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57256
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.262626262626263e-4
allele num: 7920
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9882
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.870000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.98e-1

QD
type: SiteQuality
SIO_000300: 2.051e1

FS
type: SiteQuality
SIO_000300: 7.853e0

VQSLOD
type: SiteQuality
SIO_000300: -1.61e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

DP
type: SiteQuality
SIO_000300: 1.19318e6

GenotypeDepth
all individuals: 31
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3869
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4185
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3442
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14803
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1111
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1786
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1135
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2424
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22608
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4778
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9714
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.771290916820179e-5
allele num: 56456
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7342
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.36986301369863e-3
allele num: 730
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15106
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

MQ
type: SiteQuality
SIO_000300: 5.933e1

VQSLOD
type: SiteQuality
SIO_000300: 8.7e-1

FS
type: SiteQuality
SIO_000300: 2.913e0

QD
type: SiteQuality
SIO_000300: 1.22e1

MQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.49e-1

DP
type: SiteQuality
SIO_000300: 1.155594e6

GenotypeDepth
all individuals: 10
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4376
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3277
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1180
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1845
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2579
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15229
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4054
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1000
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 924
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21991
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 695
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9640
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4736
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.344354580111875e-5
allele num: 56134
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7776
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15050
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.45e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

QD
type: SiteQuality
SIO_000300: 1.406e1

DP
type: SiteQuality
SIO_000300: 1.136343e6

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-1

FS
type: SiteQuality
SIO_000300: 7.209e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.74e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.23e-1

GenotypeDepth
all individuals: 45
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1476
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4834
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1763
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1977
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1102
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2902
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1040
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2620
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15459
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18549
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1439
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4316
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 6
allele frequency: 7.880220646178094e-4
allele num: 7614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7166
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14920
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.050861706599412e-4
allele num: 9516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4662
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55294
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

DP
type: SiteQuality
SIO_000300: 1.099028e6

QD
type: SiteQuality
SIO_000300: 1.202e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.872e0

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.49e0

FS
type: SiteQuality
SIO_000300: 1.652e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.46e-1

GenotypeDepth
all individuals: 17
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1084
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19252
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 9.75e1
variant carriers: 16

GenotypeQuality
all individuals: 4298
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4806
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 935
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2002
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2581
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15634
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1007
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2865
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1423
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1629
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.680605816914623e-4
allele num: 14922
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4632
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.628811777076761e-4
allele num: 7608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.809103408350821e-4
allele num: 55276
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.52e-1

DP
type: SiteQuality
SIO_000300: 1.096704e6

FS
type: SiteQuality
SIO_000300: 6.95e-1

QD
type: SiteQuality
SIO_000300: 1.231e1

MQRankSum
type: SiteQuality
SIO_000300: -3.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

VQSLOD
type: SiteQuality
SIO_000300: 1.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

GenotypeDepth
all individuals: 177
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15927
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2582
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4782
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1251
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4294
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2842
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 533
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20347
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2046
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4666
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.809299800977022e-5
allele num: 55270
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7174
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14922
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.684e0

VQSLOD
type: SiteQuality
SIO_000300: 6.879999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.44e-1

FS
type: SiteQuality
SIO_000300: 3.274e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.179999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.1e-3

QD
type: SiteQuality
SIO_000300: 1.251e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.093895e6

GenotypeDepth
all individuals: 52
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 86
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5128
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18996
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16523
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2207
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4597
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1375
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1138
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 796
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2323
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3041
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1135
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 4
allele frequency: 5.640157924421884e-4
allele num: 7092
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9394
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14844
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.771e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.402e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.01e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

QD
type: SiteQuality
SIO_000300: 1.329e1

FS
type: SiteQuality
SIO_000300: 1.2951e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

MQ
type: SiteQuality
SIO_000300: 5.797e1

DP
type: SiteQuality
SIO_000300: 1.062235e6

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1241
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 610
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 163
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1178
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 202
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 897
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 16607
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3143
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5237
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 9.75e1
variant carriers: 117

GenotypeQuality
all individuals: 2249
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1415
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4724
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2236
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18159
bin: 6.25e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7022
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14740
num of homozygotes: 0

African
type: Population
allele count: 113
allele frequency: 1.519225598279107e-2
allele num: 7438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4512
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.432664756446991e-3
allele num: 698
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 4.282655246252676e-4
allele num: 9340
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.193e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

DP
type: SiteQuality
SIO_000300: 1.049576e6

VQSLOD
type: SiteQuality
SIO_000300: 4.08e0

QD
type: SiteQuality
SIO_000300: 1.353e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.28e-1

GenotypeDepth
all individuals: 12
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5383
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2423
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1510
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1252
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 78
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1164
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4867
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16338
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3268
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16681
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1951
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1602
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9108
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 684
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6934
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.747423646243208e-5
allele num: 53370
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

VQSLOD
type: SiteQuality
SIO_000300: -6.008e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.119e0

DP
type: SiteQuality
SIO_000300: 1.030942e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.37e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.16e-1

QD
type: SiteQuality
SIO_000300: 5.54e0

GenotypeDepth
all individuals: 45
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1371
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1965
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 966
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3180
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5334
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17520
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2378
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4887
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1278
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17017
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.371365880416895e-4
allele num: 7292
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6938
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.737479443863059e-5
allele num: 53512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9136
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4384
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.370989854675075e-4
allele num: 14588
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.4e-3

FS
type: SiteQuality
SIO_000300: 6.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.156e0

QD
type: SiteQuality
SIO_000300: 1.344e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.69e-1

DP
type: SiteQuality
SIO_000300: 1.027012e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

MQRankSum
type: SiteQuality
SIO_000300: 5.02e-1

GenotypeDepth
all individuals: 54
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5546
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18724
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2749
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6086
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14812
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1633
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1083
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3431
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1160
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 652
bin: 9.75e1
variant carriers: 17

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4226
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.689928140491104e-4
allele num: 52046
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6748
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7072
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 4.522840343735866e-4
allele num: 8844
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14118
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.07e0

MQ
type: SiteQuality
SIO_000300: 5.916e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.889999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.169e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.281e0

DP
type: SiteQuality
SIO_000300: 9.65454e5

GenotypeDepth
all individuals: 45
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 911
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 18893
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5579
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1065
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1147
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2769
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3456
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6140
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 964
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14822
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1619
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14060
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4218
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 672
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.838182236892607e-5
allele num: 52108
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8860
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7078
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6746
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.664e0

QD
type: SiteQuality
SIO_000300: 1.177e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.9e0

MQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

DP
type: SiteQuality
SIO_000300: 9.60744e5

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1356
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1480
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3047
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 930
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1379
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19034
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12176
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3748
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1181
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6580
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5958
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1180
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8738
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.955263569529173e-5
allele num: 51144
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4098
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6822
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13770
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.963e0

MQRankSum
type: SiteQuality
SIO_000300: -8.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.884e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

QD
type: SiteQuality
SIO_000300: 1.021e1

VQSLOD
type: SiteQuality
SIO_000300: 1.37e-1

DP
type: SiteQuality
SIO_000300: 9.29723e5

GenotypeQuality
all individuals: 1200
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6058
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3822
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6691
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1474
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 994
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3130
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 9.75e1
variant carriers: 142

GenotypeQuality
all individuals: 19146
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1421
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11378
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 9.25e1
variant carriers: 1

Other
type: Population
allele count: 1
allele frequency: 1.533742331288344e-3
allele num: 652
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6642
num of homozygotes: 0

South Asian
type: Population
allele count: 132
allele frequency: 9.642074506939371e-3
allele num: 13690
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4040
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6754
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.96811651249754e-5
allele num: 50810
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.76e-1

QD
type: SiteQuality
SIO_000300: 2.65e0

MQRankSum
type: SiteQuality
SIO_000300: -1.827e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.6e-3

MQ
type: SiteQuality
SIO_000300: 5.416e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.24e-1

DP
type: SiteQuality
SIO_000300: 9.19974e5

VQSLOD
type: SiteQuality
SIO_000300: -3.374e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-2

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1510
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1412
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3870
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3194
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1013
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6102
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1146
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11080
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19240
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6716
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1407
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4038
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e0

VQSLOD
type: SiteQuality
SIO_000300: 5.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

QD
type: SiteQuality
SIO_000300: 1.213e1

DP
type: SiteQuality
SIO_000300: 9.12052e5

GenotypeDepth
all individuals: 156
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19516
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3332
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10202
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3949
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1179
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6790
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6200
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1095
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1492
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 65
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1536
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1272
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1294
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49980
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3978
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13038
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.77e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.399999999999999e-3

QD
type: SiteQuality
SIO_000300: 1.463e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.98268e5

GenotypeDepth
all individuals: 223
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1125
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6907
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1996
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19149
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1356
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4049
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 64
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8694
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3384
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1205
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6270
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1611
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1504
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3924
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.015478877781361e-5
allele num: 49616
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12936
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.752e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.90203e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.55e0

MQRankSum
type: SiteQuality
SIO_000300: -1.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.599999999999999e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.29e-1

QD
type: SiteQuality
SIO_000300: 1.093e1

GenotypeQuality
all individuals: 104
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1586
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9378
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1316
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19736
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1075
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1472
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1190
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4010
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6885
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3423
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 790
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1195
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12832
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3932
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.537e0

MQ
type: SiteQuality
SIO_000300: 4.712e1

DP
type: SiteQuality
SIO_000300: 8.85841e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.42e-1

QD
type: SiteQuality
SIO_000300: 2.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.06e-1

GenotypeDepth
all individuals: 733
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20468
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3426
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1220
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1207
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1071
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1270
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3909
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6824
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 986
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6294
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10775
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12782
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3924
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.011991469156171e-5
allele num: 49702
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.992e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.1e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.242e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.149999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.81e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.399999999999999e-3

DP
type: SiteQuality
SIO_000300: 8.85056e5

GenotypeDepth
all individuals: 53
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1191
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6292
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10599
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1266
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1213
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1026
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6855
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20354
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3918
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3472
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1245
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12714
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3888
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.541307028360049e-4
allele num: 6488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.59e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.528e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.3e-3

DP
type: SiteQuality
SIO_000300: 8.82372e5

QD
type: SiteQuality
SIO_000300: 1.004e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 561
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20809
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7105
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1164
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4228
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6586
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1917
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1428
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7135
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3588
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 61
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1658
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1294
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 9.25e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.070564850091105e-5
allele num: 48296
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.210067763794773e-4
allele num: 8264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3712
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11898
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.48293e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.11e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.23e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.86e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.323e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.0e-1

QD
type: SiteQuality
SIO_000300: 5.81e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.81e-1

FS
type: SiteQuality
SIO_000300: 1.881e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1294
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7135
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6586
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1164
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1917
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1658
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20809
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3588
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7105
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4228
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1428
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3712
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6274
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.070564850091105e-5
allele num: 48296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11898
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.81e-1

FS
type: SiteQuality
SIO_000300: 1.881e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.23e-1

DP
type: SiteQuality
SIO_000300: 8.48293e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.11e-2

QD
type: SiteQuality
SIO_000300: 5.81e0

MQRankSum
type: SiteQuality
SIO_000300: -3.86e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.323e0

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1190
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2662
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3653
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1876
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1522
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 125
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 7076
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20149
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1956
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5756
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 797
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4255
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1243
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 654
bin: 9.75e1
variant carriers: 29

GenotypeQuality
all individuals: 6490
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 7.25e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6404
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.224889759921607e-4
allele num: 8164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.092487968194183e-5
allele num: 47790
num of homozygotes: 0

African
type: Population
allele count: 28
allele frequency: 4.519044544867657e-3
allele num: 6196
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.164e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

FS
type: SiteQuality
SIO_000300: 1.102e0

MQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.4e-3

DP
type: SiteQuality
SIO_000300: 8.45271e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.25e0

GenotypeDepth
all individuals: 45
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1151
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3587
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21076
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1453
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4159
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1814
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6972
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7532
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6406
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1789
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 845
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3680
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6226
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.243496357960458e-5
allele num: 48050
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.018e1

FS
type: SiteQuality
SIO_000300: 4.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.47e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.91e-1

DP
type: SiteQuality
SIO_000300: 8.48532e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 5.69e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.01e-1

QD
type: SiteQuality
SIO_000300: 1.402e1

GenotypeDepth
all individuals: 100
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 120
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3393
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1157
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9480
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 911
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1484
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6327
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6834
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21889
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1320
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4003
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8284
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.703220191470844e-5
allele num: 11490
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.393e0

QD
type: SiteQuality
SIO_000300: 1.763e1

VQSLOD
type: SiteQuality
SIO_000300: -2.961e-1

DP
type: SiteQuality
SIO_000300: 8.55154e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.4e-2

MQRankSum
type: SiteQuality
SIO_000300: -8.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.21e-1

GenotypeDepth
all individuals: 47
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 21
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 9003
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 520
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1032
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6278
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3371
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1500
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1002
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 874
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 21501
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3987
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 392
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 67
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 734
bin: 9.75e1
variant carriers: 110

GenotypeQuality
all individuals: 66
bin: 8.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1337
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 6734
bin: 3.25e1
variant carriers: 3

African
type: Population
allele count: 112
allele frequency: 1.789709172259508e-2
allele num: 6258
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 586
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 4.842615012106538e-4
allele num: 8260
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48172
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3706
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.82e0

QD
type: SiteQuality
SIO_000300: 1.253e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.273e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.55812e5

GenotypeDepth
all individuals: 8851
bin: 1.75e1
variant carriers: 3

GenotypeDepth
all individuals: 12
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1263
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 931
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1277
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6199
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3893
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 912
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3300
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21748
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6642
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1357
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10037
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 103
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 9.652509652509653e-4
allele num: 8288
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11268
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48314
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.187e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.84e-1

FS
type: SiteQuality
SIO_000300: 3.33e0

DP
type: SiteQuality
SIO_000300: 8.59324e5

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 1143
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2993
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21574
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1016
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11923
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1215
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5865
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6125
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1060
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1085
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3498
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6324
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11078
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3766
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.034901365705615e-4
allele num: 6590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.466e1

DP
type: SiteQuality
SIO_000300: 8.79803e5

MQRankSum
type: SiteQuality
SIO_000300: -4.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.999999999999999e-3

FS
type: SiteQuality
SIO_000300: 1.21e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.67e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.021e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.18e0

MQ
type: SiteQuality
SIO_000300: 5.866e1

GenotypeQuality
all individuals: 5722
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21516
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1018
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2933
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 920
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1119
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5942
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1033
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3328
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12863
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6332
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.808972503617945e-4
allele num: 11056
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6676
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48806
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 590
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.87724e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.900000000000001e-3

QD
type: SiteQuality
SIO_000300: 3.076e1

VQSLOD
type: SiteQuality
SIO_000300: 7.98e-1

GenotypeQuality
all individuals: 5758
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13570
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1132
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 765
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2905
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1061
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3125
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 976
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5594
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3786
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10932
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6678
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.046412638644456e-5
allele num: 48866
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.903e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.500000000000001e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -6.15e-1

QD
type: SiteQuality
SIO_000300: 1.466e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: -6.286e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.67e0

DP
type: SiteQuality
SIO_000300: 8.94403e5

GenotypeQuality
all individuals: 20579
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2660
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5174
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5163
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15913
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 65
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2764
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 893
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1085
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 965
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10686
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49682
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8658
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3856
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.463271875914545e-4
allele num: 6834
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

FS
type: SiteQuality
SIO_000300: 8.398e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.843e0

MQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.16e0

DP
type: SiteQuality
SIO_000300: 9.22764e5

QD
type: SiteQuality
SIO_000300: 6.56e0

VQSLOD
type: SiteQuality
SIO_000300: -2.156e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.79e-1

GenotypeQuality
all individuals: 1085
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5174
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 965
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2660
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15913
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2764
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 893
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 642
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1308
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5163
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6834
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10686
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.012801417012198e-5
allele num: 49682
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3856
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.843e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.16e0

MQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

DP
type: SiteQuality
SIO_000300: 9.22764e5

FS
type: SiteQuality
SIO_000300: 8.398e0

QD
type: SiteQuality
SIO_000300: 6.56e0

VQSLOD
type: SiteQuality
SIO_000300: -2.156e0

GenotypeQuality
all individuals: 1336
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1005
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2654
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1219
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5106
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 113
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 872
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20375
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2745
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1120
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15793
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3860
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49764
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8662
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.405568096313017e-5
allele num: 10632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6864
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
SIO_000300: 6.368e0

QD
type: SiteQuality
SIO_000300: 1.352e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.092e0

VQSLOD
type: SiteQuality
SIO_000300: -1.011e0

DP
type: SiteQuality
SIO_000300: 9.26675e5

GenotypeQuality
all individuals: 4722
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1100
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4692
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2486
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 816
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19801
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2484
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18417
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 869
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 957
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1505
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6962
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3926
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8866
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.970617431010522e-5
allele num: 50370
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.461e0

QD
type: SiteQuality
SIO_000300: 1.059e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.485e0

VQSLOD
type: SiteQuality
SIO_000300: 9.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.89e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.48687e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-2

GenotypeQuality
all individuals: 354
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 262
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19801
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2484
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4722
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4692
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1505
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 869
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 957
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18417
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2486
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1100
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3926
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6962
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50370
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.493070058857034e-5
allele num: 10534
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.28e-1

FS
type: SiteQuality
SIO_000300: 2.461e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.13e-1

DP
type: SiteQuality
SIO_000300: 9.48687e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.059e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.485e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.89e-1

GenotypeQuality
all individuals: 2434
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4579
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4634
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18781
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2463
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1109
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1543
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 979
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 817
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 878
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3954
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 8.556759840273817e-4
allele num: 7012
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8928
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10462
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.021e0

VQSLOD
type: SiteQuality
SIO_000300: 6.51e-1

FS
type: SiteQuality
SIO_000300: 6.577e0

QD
type: SiteQuality
SIO_000300: 1.082e1

DP
type: SiteQuality
SIO_000300: 9.54132e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.646e0

GenotypeQuality
all individuals: 68
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4575
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2495
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1165
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17593
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1249
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1153
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1609
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2435
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 676
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4636
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1454
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 898
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18745
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

Latino
type: Population
allele count: 20
allele frequency: 2.230649118893598e-3
allele num: 8966
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3994
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50942
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7068
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.3e-3

QD
type: SiteQuality
SIO_000300: 1.184e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.33e0

FS
type: SiteQuality
SIO_000300: 1.134e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.59092e5

ClippingRankSum
type: SiteQuality
SIO_000300: -4.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.91e-1

GenotypeQuality
all individuals: 1295
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18527
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18723
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 920
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2471
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2432
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4454
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4445
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1355
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1629
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1014
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4020
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.483679525222552e-4
allele num: 6740
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51170
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7106
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9064
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.89e-1

DP
type: SiteQuality
SIO_000300: 9.6863e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.205e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.1e0

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.846e0

FS
type: SiteQuality
SIO_000300: 6.466e0

GenotypeQuality
all individuals: 635
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20186
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2363
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1276
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18104
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1274
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4196
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4277
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 872
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 134
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1715
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6826
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 634
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7200
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9206
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10196
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.791505791505791e-5
allele num: 51800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4102
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.1e-3

MQ
type: SiteQuality
SIO_000300: 5.89e1

MQRankSum
type: SiteQuality
SIO_000300: -7.01e-1

FS
type: SiteQuality
SIO_000300: 5.123e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

QD
type: SiteQuality
SIO_000300: 8.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.54e-1

DP
type: SiteQuality
SIO_000300: 9.83382e5

VQSLOD
type: SiteQuality
SIO_000300: -1.518e0

GenotypeQuality
all individuals: 616
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4099
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1212
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 893
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 845
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2442
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21104
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4048
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2344
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1343
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1776
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7322
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4146
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.909927804728981e-5
allele num: 52358
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.9955e5

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.115e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-3

FS
type: SiteQuality
SIO_000300: 1.0006e1

VQSLOD
type: SiteQuality
SIO_000300: -3.627e-1

QD
type: SiteQuality
SIO_000300: 1.3e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1