16-1394188-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394188
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394188
    reference: chr 16
allele count: 1
allele frequency: 8.444662129068216e-6
allele num: 118418
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1428-40G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.362G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1512-40G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1404-40G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1443-40G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1563-40G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1563-40G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1617-40G>A
  variant of: http://identifiers.org/hgnc/948
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6006
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8281
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9033
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8889
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4483
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5781
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

16-1394194-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394194
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394194
    reference: chr 16
allele count: 1
allele frequency: 8.425735566714975e-6
allele num: 118684
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1563-34G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1404-34G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1617-34G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1563-34G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1428-34G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.368G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1443-34G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1512-34G>C
  variant of: http://identifiers.org/hgnc/948
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8281
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6654
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7577
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3645
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20960
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1338
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4497
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5851
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

16-1394195-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394195
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394195
    reference: chr 16
allele count: 1
allele frequency: 8.430565859580495e-6
allele num: 118616
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1404-33C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1617-33C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1428-33C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1443-33C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.369C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1563-33C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1512-33C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1563-33C>G
  variant of: http://identifiers.org/hgnc/948
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5999
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8275
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6691
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9051
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3151
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum

16-1394198-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394198
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394198
    reference: chr 16
allele count: 2
allele frequency: 1.682312169846237e-5
allele num: 118884
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1512-30G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.372G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1428-30G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1404-30G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1563-30G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1617-30G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1443-30G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1563-30G>C
  variant of: http://identifiers.org/hgnc/948
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7568
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9157
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6000
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9080
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6749
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8279
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4197
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1259
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20966
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum

16-1394203-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394203
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394203
    reference: chr 16
allele count: 1
allele frequency: 8.397292712829384e-6
allele num: 119086
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1443-25A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.377A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1512-25A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1617-25A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1428-25A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1563-25A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1404-25A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1563-25A>G
  variant of: http://identifiers.org/hgnc/948
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7574
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7011
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9243
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4280
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3211
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3656
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

16-1394204-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394204
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394204
    reference: chr 16
allele count: 2
allele frequency: 1.678049435336365e-5
allele num: 119186
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1404-24C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1617-24C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.378C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1428-24C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1563-24C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1563-24C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1443-24C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1512-24C>T
  variant of: http://identifiers.org/hgnc/948
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7574
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7029
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3227
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13287
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

16-1394205-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394205
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394205
    reference: chr 16
allele count: 4
allele frequency: 3.35328538135238e-5
allele num: 119286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.379G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1428-23G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1443-23G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1563-23G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1404-23G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1512-23G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1617-23G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1563-23G>A
  variant of: http://identifiers.org/hgnc/948
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8304
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7574
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9303
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6077
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2485
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1040
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20975
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

16-1394205-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394205
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394205
    reference: chr 16
allele count: 1
allele frequency: 8.38321345338095e-6
allele num: 119286
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1428-23G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1617-23G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1512-23G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1404-23G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.379G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1443-23G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1563-23G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1563-23G>C
  variant of: http://identifiers.org/hgnc/948
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8304
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7574
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9303
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6077
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1040
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13450
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum

16-1394211-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394211
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394211
    reference: chr 16
allele count: 3
allele frequency: 2.509746181002895e-5
allele num: 119534
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1563-17G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1617-17G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1428-17G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1404-17G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1443-17G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.385G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1563-17G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1512-17G>A
  variant of: http://identifiers.org/hgnc/948
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7573
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6007
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6110
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2486
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4239
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20984
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3668
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ

16-1394220-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394220
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394220
    reference: chr 16
allele count: 2
allele frequency: 1.668446342765617e-5
allele num: 119872
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1404-8C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1428-8C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1617-8C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1443-8C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.394C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1512-8C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1563-8C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1563-8C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8331
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9256
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6008
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3669
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4613
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
hgvs: c.1617-8C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-1394223-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394223
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394223
    reference: chr 16
allele count: 1
allele frequency: 8.335139280177371e-6
allele num: 119974
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1563-5C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1512-5C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1428-5C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1404-5C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1563-5C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.397C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1617-5C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1443-5C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9267
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6008
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3277
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6199
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3674
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
hgvs: c.1617-5C>T
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

16-1394224-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394224
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394224
    reference: chr 16
allele count: 1
allele frequency: 8.333055564814507e-6
allele num: 120004
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.398C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1443-4C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1404-4C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1617-4C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1428-4C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1563-4C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1512-4C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1563-4C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9275
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6008
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8339
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9540
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6205
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3675
  bin: 9.25e1
  variant carriers: 0
hgvs: c.1617-4C>T
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

16-1394226-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394226
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394226
    reference: chr 16
allele count: 1
allele frequency: 8.328613785521537e-6
allele num: 120068
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1443-2A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1563-2A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1563-2A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1617-2A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1404-2A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1512-2A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.400A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1428-2A>G
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8341
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7584
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7520
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9277
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6007
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4266
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4616
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3283
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
hgvs: c.1617-2A>G
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

16-1394227-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394227
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394227
    reference: chr 16
allele count: 2
allele frequency: 1.664946222237022e-5
allele num: 120124
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1512-1G>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1563-1G>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1443-1G>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1428-1G>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1404-1G>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.401G>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1617-1G>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1563-1G>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6006
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9278
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9589
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8340
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7535
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14085
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3672
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20994
  bin: 9.75e1
  variant carriers: 2
hgvs: c.1617-1G>T
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

16-1394234-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394234
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394234
    reference: chr 16
allele count: 3
allele frequency: 2.493351063829787e-5
allele num: 120320
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1569G>A
  hgvsp: ENST00000397489.1:c.1569G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1569G>A
  hgvsp: ENST00000397488.2:c.1569G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1434G>A
  hgvsp: ENST00000568887.1:c.1434G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1449G>A
  hgvsp: ENST00000562208.1:c.1449G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1410G>A
  hgvsp: ENST00000421665.2:c.1410G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1518G>A
  hgvsp: ENST00000426824.3:c.1518G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.408G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1623G>A
  hgvsp: ENST00000324385.5:c.1623G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9295
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6006
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4630
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu541Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum

16-1394235-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394235
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394235
    reference: chr 16
allele count: 1
allele frequency: 8.30923654734603e-6
allele num: 120348
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.409G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1450G>C
  hgvsp: ENSP00000458134.1:p.Gly484Arg
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1435G>C
  hgvsp: ENSP00000457644.1:p.Gly479Arg
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1624G>C
  hgvsp: ENSP00000324510.5:p.Gly542Arg
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1519G>C
  hgvsp: ENSP00000407242.3:p.Gly507Arg
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1570G>C
  hgvsp: ENSP00000380626.1:p.Gly524Arg
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1411G>C
  hgvsp: ENSP00000409533.2:p.Gly471Arg
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1570G>C
  hgvsp: ENSP00000380625.2:p.Gly524Arg
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8341
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9660
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6007
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2501
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6257
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly542Arg
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

16-1394237-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394237
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394237
    reference: chr 16
allele count: 1
allele frequency: 8.306475728477921e-6
allele num: 120388
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1626C>G
  hgvsp: ENST00000324385.5:c.1626C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1572C>G
  hgvsp: ENST00000397489.1:c.1572C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1452C>G
  hgvsp: ENST00000562208.1:c.1452C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1437C>G
  hgvsp: ENST00000568887.1:c.1437C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1572C>G
  hgvsp: ENST00000397488.2:c.1572C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1413C>G
  hgvsp: ENST00000421665.2:c.1413C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.411C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1521C>G
  hgvsp: ENST00000426824.3:c.1521C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6006
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9663
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4277
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6263
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly542Gly
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

16-1394242-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394242
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394242
    reference: chr 16
allele count: 5
allele frequency: 4.14868901427149e-5
allele num: 120520
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1418T>A
  hgvsp: ENSP00000409533.2:p.Leu473Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1457T>A
  hgvsp: ENSP00000458134.1:p.Leu486Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1442T>A
  hgvsp: ENSP00000457644.1:p.Leu481Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1577T>A
  hgvsp: ENSP00000380625.2:p.Leu526Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1631T>A
  hgvsp: ENSP00000324510.5:p.Leu544Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1526T>A
  hgvsp: ENSP00000407242.3:p.Leu509Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1577T>A
  hgvsp: ENSP00000380626.1:p.Leu526Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.416T>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6007
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8344
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4277
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2501
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3304
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu544Gln
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

16-1394250-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394250
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394250
    reference: chr 16
allele count: 1
allele frequency: 8.28775070445881e-6
allele num: 120660
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1426T>G
  hgvsp: ENSP00000409533.2:p.Phe476Val
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1585T>G
  hgvsp: ENSP00000380625.2:p.Phe529Val
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.424T>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1585T>G
  hgvsp: ENSP00000380626.1:p.Phe529Val
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1450T>G
  hgvsp: ENSP00000457644.1:p.Phe484Val
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1639T>G
  hgvsp: ENSP00000324510.5:p.Phe547Val
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1534T>G
  hgvsp: ENSP00000407242.3:p.Phe512Val
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1465T>G
  hgvsp: ENSP00000458134.1:p.Phe489Val
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6007
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21000
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14432
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3304
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4646
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Phe547Val
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum

16-1394255-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394255
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394255
    reference: chr 16
allele count: 2
allele frequency: 1.656808655168415e-5
allele num: 120714
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1431A>G
  hgvsp: ENST00000421665.2:c.1431A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1539A>G
  hgvsp: ENST00000426824.3:c.1539A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1644A>G
  hgvsp: ENST00000324385.5:c.1644A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.429A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1455A>G
  hgvsp: ENST00000568887.1:c.1455A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1470A>G
  hgvsp: ENST00000562208.1:c.1470A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1590A>G
  hgvsp: ENST00000397488.2:c.1590A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1590A>G
  hgvsp: ENST00000397489.1:c.1590A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9738
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7584
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6008
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7818
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4276
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3683
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6298
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gln548Gln
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD

16-1394256-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394256
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394256
    reference: chr 16
allele count: 1
allele frequency: 8.282808203293245e-6
allele num: 120732
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1591C>T
  hgvsp: ENSP00000380626.1:p.Pro531Ser
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1471C>T
  hgvsp: ENSP00000458134.1:p.Pro491Ser
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.430C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1591C>T
  hgvsp: ENSP00000380625.2:p.Pro531Ser
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1456C>T
  hgvsp: ENSP00000457644.1:p.Pro486Ser
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1645C>T
  hgvsp: ENSP00000324510.5:p.Pro549Ser
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1432C>T
  hgvsp: ENSP00000409533.2:p.Pro478Ser
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1540C>T
  hgvsp: ENSP00000407242.3:p.Pro514Ser
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9741
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7833
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6007
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4276
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3683
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro549Ser
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

16-1394260-CCTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394260
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394257
    reference: chr 16
allele count: 1
allele frequency: 8.279379377721846e-6
allele num: 120782
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.435_437delCTT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1461_1463delCTT
  hgvsp: ENSP00000457644.1:p.Phe488del
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1596_1598delCTT
  hgvsp: ENSP00000380626.1:p.Phe533del
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1650_1652delCTT
  hgvsp: ENSP00000324510.5:p.Phe551del
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1437_1439delCTT
  hgvsp: ENSP00000409533.2:p.Phe480del
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1476_1478delCTT
  hgvsp: ENSP00000458134.1:p.Phe493del
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1596_1598delCTT
  hgvsp: ENSP00000380625.2:p.Phe533del
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1545_1547delCTT
  hgvsp: ENSP00000407242.3:p.Phe516del
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8344
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6006
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21003
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3684
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2506
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6304
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Phe551del
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: CCTT
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

16-1394267-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394267
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394267
    reference: chr 16
allele count: 1
allele frequency: 8.275405494869249e-6
allele num: 120840
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1482G>C
  hgvsp: ENSP00000458134.1:p.Glu494Asp
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1602G>C
  hgvsp: ENSP00000380626.1:p.Glu534Asp
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1443G>C
  hgvsp: ENSP00000409533.2:p.Glu481Asp
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1602G>C
  hgvsp: ENSP00000380625.2:p.Glu534Asp
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1551G>C
  hgvsp: ENSP00000407242.3:p.Glu517Asp
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1467G>C
  hgvsp: ENSP00000457644.1:p.Glu489Asp
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.441G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1656G>C
  hgvsp: ENSP00000324510.5:p.Glu552Asp
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6006
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9760
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8344
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3685
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu552Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

16-1394272-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394272
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394272
    reference: chr 16
allele count: 3
allele frequency: 2.48208760114507e-5
allele num: 120866
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.446G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1487G>A
  hgvsp: ENSP00000458134.1:p.Cys496Tyr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1607G>A
  hgvsp: ENSP00000380626.1:p.Cys536Tyr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1661G>A
  hgvsp: ENSP00000324510.5:p.Cys554Tyr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1448G>A
  hgvsp: ENSP00000409533.2:p.Cys483Tyr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1607G>A
  hgvsp: ENSP00000380625.2:p.Cys536Tyr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1472G>A
  hgvsp: ENSP00000457644.1:p.Cys491Tyr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1556G>A
  hgvsp: ENSP00000407242.3:p.Cys519Tyr
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9773
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6006
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Cys554Tyr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

16-1394273-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394273
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394273
    reference: chr 16
allele count: 1
allele frequency: 8.272803984182399e-6
allele num: 120878
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1488C>T
  hgvsp: ENST00000562208.1:c.1488C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1608C>T
  hgvsp: ENST00000397489.1:c.1608C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1473C>T
  hgvsp: ENST00000568887.1:c.1473C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1662C>T
  hgvsp: ENST00000324385.5:c.1662C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1557C>T
  hgvsp: ENST00000426824.3:c.1557C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1449C>T
  hgvsp: ENST00000421665.2:c.1449C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.447C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1608C>T
  hgvsp: ENST00000397488.2:c.1608C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7861
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6006
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9774
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8344
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Cys554Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

16-1394274-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394274
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394274
    reference: chr 16
allele count: 5
allele frequency: 4.136196684424738e-5
allele num: 120884
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1558C>T
  hgvsp: ENSP00000407242.3:p.Pro520Ser
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1663C>T
  hgvsp: ENSP00000324510.5:p.Pro555Ser
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1450C>T
  hgvsp: ENSP00000409533.2:p.Pro484Ser
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1489C>T
  hgvsp: ENSP00000458134.1:p.Pro497Ser
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.448C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1474C>T
  hgvsp: ENSP00000457644.1:p.Pro492Ser
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1609C>T
  hgvsp: ENSP00000380625.2:p.Pro537Ser
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1609C>T
  hgvsp: ENSP00000380626.1:p.Pro537Ser
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9327
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7862
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9769
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3302
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro555Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

16-1394276-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394276
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394276
    reference: chr 16
allele count: 2
allele frequency: 1.654177625593436e-5
allele num: 120906
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1476C>T
  hgvsp: ENST00000568887.1:c.1476C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1611C>T
  hgvsp: ENST00000397488.2:c.1611C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1560C>T
  hgvsp: ENST00000426824.3:c.1560C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1611C>T
  hgvsp: ENST00000397489.1:c.1611C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1665C>T
  hgvsp: ENST00000324385.5:c.1665C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1491C>T
  hgvsp: ENST00000562208.1:c.1491C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1452C>T
  hgvsp: ENST00000421665.2:c.1452C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.450C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7870
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2505
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6303
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4273
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro555Pro
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/16-1394279-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394279
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394279
    reference: chr 16
allele count: 1
allele frequency: 8.270888127967181e-6
allele num: 120906
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1563C>A
  hgvsp: ENSP00000407242.3:p.Phe521Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1479C>A
  hgvsp: ENSP00000457644.1:p.Phe493Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1455C>A
  hgvsp: ENSP00000409533.2:p.Phe485Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.453C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1494C>A
  hgvsp: ENSP00000458134.1:p.Phe498Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1614C>A
  hgvsp: ENSP00000380626.1:p.Phe538Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1614C>A
  hgvsp: ENSP00000380625.2:p.Phe538Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1668C>A
  hgvsp: ENSP00000324510.5:p.Phe556Leu
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7871
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9330
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21002
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4650
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6301
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Phe556Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

16-1394284-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394284
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394284
    reference: chr 16
allele count: 1
allele frequency: 8.268699664290793e-6
allele num: 120938
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1499C>T
  hgvsp: ENSP00000458134.1:p.Ser500Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1460C>T
  hgvsp: ENSP00000409533.2:p.Ser487Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1619C>T
  hgvsp: ENSP00000380625.2:p.Ser540Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1484C>T
  hgvsp: ENSP00000457644.1:p.Ser495Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1673C>T
  hgvsp: ENSP00000324510.5:p.Ser558Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1568C>T
  hgvsp: ENSP00000407242.3:p.Ser523Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1619C>T
  hgvsp: ENSP00000380626.1:p.Ser540Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.458C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7871
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4280
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3304
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4651
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser558Leu
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

16-1394285-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394285
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394285
    reference: chr 16
allele count: 3
allele frequency: 2.480363786688714e-5
allele num: 120950
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1674G>A
  hgvsp: ENST00000324385.5:c.1674G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.459G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1500G>A
  hgvsp: ENST00000562208.1:c.1500G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1569G>A
  hgvsp: ENST00000426824.3:c.1569G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1485G>A
  hgvsp: ENST00000568887.1:c.1485G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1620G>A
  hgvsp: ENST00000397489.1:c.1620G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1461G>A
  hgvsp: ENST00000421665.2:c.1461G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1620G>A
  hgvsp: ENST00000397488.2:c.1620G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7584
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4280
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14561
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3303
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser558Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP

16-1394288-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394288
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394288
    reference: chr 16
allele count: 1
allele frequency: 8.266239026567692e-6
allele num: 120974
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.462G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1488G>C
  hgvsp: ENSP00000457644.1:p.Glu496Asp
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1503G>C
  hgvsp: ENSP00000458134.1:p.Glu501Asp
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1572G>C
  hgvsp: ENSP00000407242.3:p.Glu524Asp
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1623G>C
  hgvsp: ENSP00000380625.2:p.Glu541Asp
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1623G>C
  hgvsp: ENSP00000380626.1:p.Glu541Asp
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1677G>C
  hgvsp: ENSP00000324510.5:p.Glu559Asp
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1464G>C
  hgvsp: ENSP00000409533.2:p.Glu488Asp
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6002
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7879
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9783
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4280
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3304
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4276
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu559Asp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

16-1394296-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394296
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394296
    reference: chr 16
allele count: 5
allele frequency: 4.132982856387112e-5
allele num: 120978
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1631T>C
  hgvsp: ENSP00000380625.2:p.Met544Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1685T>C
  hgvsp: ENSP00000324510.5:p.Met562Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1631T>C
  hgvsp: ENSP00000380626.1:p.Met544Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1496T>C
  hgvsp: ENSP00000457644.1:p.Met499Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1511T>C
  hgvsp: ENSP00000458134.1:p.Met504Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1472T>C
  hgvsp: ENSP00000409533.2:p.Met491Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1580T>C
  hgvsp: ENSP00000407242.3:p.Met527Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.470T>C
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4279
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9789
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14487
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4651
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Met562Thr
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD

16-1394307-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394307
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394307
    reference: chr 16
allele count: 3
allele frequency: 2.479789713832267e-5
allele num: 120978
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1591G>A
  hgvsp: ENSP00000407242.3:p.Ala531Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1696G>A
  hgvsp: ENSP00000324510.5:p.Ala566Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1507G>A
  hgvsp: ENSP00000457644.1:p.Ala503Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1642G>A
  hgvsp: ENSP00000380625.2:p.Ala548Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1522G>A
  hgvsp: ENSP00000458134.1:p.Ala508Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1483G>A
  hgvsp: ENSP00000409533.2:p.Ala495Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.481G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1642G>A
  hgvsp: ENSP00000380626.1:p.Ala548Thr
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7760
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9319
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14414
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2503
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala566Thr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/16-1394308-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394308
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394308
    reference: chr 16
allele count: 3
allele frequency: 2.479953707530793e-5
allele num: 120970
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1592C>A
  hgvsp: ENSP00000407242.3:p.Ala531Glu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1523C>A
  hgvsp: ENSP00000458134.1:p.Ala508Glu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1697C>A
  hgvsp: ENSP00000324510.5:p.Ala566Glu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1643C>A
  hgvsp: ENSP00000380626.1:p.Ala548Glu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1508C>A
  hgvsp: ENSP00000457644.1:p.Ala503Glu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1484C>A
  hgvsp: ENSP00000409533.2:p.Ala495Glu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.482C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1643C>A
  hgvsp: ENSP00000380625.2:p.Ala548Glu
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9322
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7756
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala566Glu
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-1394309-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394309
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394309
    reference: chr 16
allele count: 2
allele frequency: 1.653411815280832e-5
allele num: 120962
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1698G>A
  hgvsp: ENST00000324385.5:c.1698G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1644G>A
  hgvsp: ENST00000397488.2:c.1644G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.483G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1485G>A
  hgvsp: ENST00000421665.2:c.1485G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1593G>A
  hgvsp: ENST00000426824.3:c.1593G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1524G>A
  hgvsp: ENST00000562208.1:c.1524G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1509G>A
  hgvsp: ENST00000568887.1:c.1509G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1644G>A
  hgvsp: ENST00000397489.1:c.1644G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9767
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6287
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala566Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

16-1394311-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394311
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394311
    reference: chr 16
allele count: 1
allele frequency: 8.267605866693123e-6
allele num: 120954
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1646C>T
  hgvsp: ENSP00000380626.1:p.Ala549Val
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.485C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1700C>T
  hgvsp: ENSP00000324510.5:p.Ala567Val
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1595C>T
  hgvsp: ENSP00000407242.3:p.Ala532Val
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1487C>T
  hgvsp: ENSP00000409533.2:p.Ala496Val
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1511C>T
  hgvsp: ENSP00000457644.1:p.Ala504Val
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1646C>T
  hgvsp: ENSP00000380625.2:p.Ala549Val
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1526C>T
  hgvsp: ENSP00000458134.1:p.Ala509Val
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9770
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21005
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4639
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala567Val
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP

16-1394312-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394312
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394312
    reference: chr 16
allele count: 1
allele frequency: 8.268152729317216e-6
allele num: 120946
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.486C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1647C>G
  hgvsp: ENST00000397488.2:c.1647C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1512C>G
  hgvsp: ENST00000568887.1:c.1512C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1488C>G
  hgvsp: ENST00000421665.2:c.1488C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1701C>G
  hgvsp: ENST00000324385.5:c.1701C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1647C>G
  hgvsp: ENST00000397489.1:c.1647C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1596C>G
  hgvsp: ENST00000426824.3:c.1596C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1527C>G
  hgvsp: ENST00000562208.1:c.1527C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7731
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3684
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2503
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14373
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala567Ala
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

16-1394312-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394312
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394312
    reference: chr 16
allele count: 1
allele frequency: 8.268152729317216e-6
allele num: 120946
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1488C>T
  hgvsp: ENST00000421665.2:c.1488C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1647C>T
  hgvsp: ENST00000397488.2:c.1647C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1596C>T
  hgvsp: ENST00000426824.3:c.1596C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1527C>T
  hgvsp: ENST00000562208.1:c.1527C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.486C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1512C>T
  hgvsp: ENST00000568887.1:c.1512C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1701C>T
  hgvsp: ENST00000324385.5:c.1701C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1647C>T
  hgvsp: ENST00000397489.1:c.1647C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7731
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4638
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala567Ala
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

16-1394315-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394315
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394315
    reference: chr 16
allele count: 3
allele frequency: 2.480568877129155e-5
allele num: 120940
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1530G>T
  hgvsp: ENST00000562208.1:c.1530G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1491G>T
  hgvsp: ENST00000421665.2:c.1491G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1599G>T
  hgvsp: ENST00000426824.3:c.1599G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1650G>T
  hgvsp: ENST00000397488.2:c.1650G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1704G>T
  hgvsp: ENST00000324385.5:c.1704G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1650G>T
  hgvsp: ENST00000397489.1:c.1650G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1515G>T
  hgvsp: ENST00000568887.1:c.1515G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.489G>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9744
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7732
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6287
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3301
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3684
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu568Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ

16-1394319-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394319
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394319
    reference: chr 16
allele count: 1
allele frequency: 8.269520202437855e-6
allele num: 120926
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1518+1G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1494+1G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1602+1G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1653+1G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1707+1G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.492+1G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1653+1G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1533+1G>C
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7584
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7693
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9736
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4638
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14322
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4269
  bin: 8.25e1
  variant carriers: 0
hgvs: c.1707+1G>C
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

16-1394321-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394321
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394320
    reference: chr 16
allele count: 1
allele frequency: 8.270067318347971e-6
allele num: 120918
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1494+4delT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1653+4delT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1602+4delT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1707+4delT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1653+4delT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.492+4delT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1533+4delT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1518+4delT
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9725
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8352
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6279
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.25e1
  variant carriers: 0
hgvs: c.1707+4delT
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: GT
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

16-1394333-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394333
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394333
    reference: chr 16
allele count: 1
allele frequency: 8.273351534706709e-6
allele num: 120870
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1707+15C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1653+15C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1518+15C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.492+15C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1602+15C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1653+15C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1533+15C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1494+15C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8360
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9662
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3681
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3299
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2503
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13944
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

16-1394342-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394342
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394342
    reference: chr 16
allele count: 1
allele frequency: 8.279653579294243e-6
allele num: 120778
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1653+24G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.492+24G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1533+24G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1707+24G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1653+24G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1518+24G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1602+24G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1494+24G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6006
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9570
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4285
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21007
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3286
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4267
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13679
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

16-1394344-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394344
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394344
    reference: chr 16
allele count: 35
allele frequency: 2.898022720498129e-4
allele num: 120772
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1533+26C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1653+26C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1518+26C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1653+26C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1602+26C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.492+26C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1707+26C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1494+26C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9294
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9548
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6014
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7590
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8348
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7273
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4285
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2497
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3683
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3283
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6204
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 1
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-1394345-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394345
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394345
    reference: chr 16
allele count: 6
allele frequency: 4.968614915781977e-5
allele num: 120758
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1707+27G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1653+27G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.492+27G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1602+27G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1533+27G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1653+27G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1518+27G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1494+27G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4292
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8343
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9529
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9295
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3282
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13529
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

16-1394345-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394345
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394345
    reference: chr 16
allele count: 14
allele frequency: 1.159343480349128e-4
allele num: 120758
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1653+27G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1602+27G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1518+27G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1707+27G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1653+27G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.492+27G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1533+27G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1494+27G>C
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4292
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9529
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9295
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8343
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4608
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2496
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13529
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6189
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff

16-1394347-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394347
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394347
    reference: chr 16
allele count: 1
allele frequency: 8.282670995742708e-6
allele num: 120734
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1653+29C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1533+29C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1518+29C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1707+29C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1653+29C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.492+29C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1494+29C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1602+29C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6010
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9276
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8341
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3680
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4621
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum

16-1394349-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394349
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394349
    reference: chr 16
allele count: 4
allele frequency: 3.313178166155885e-5
allele num: 120730
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1602+31G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1518+31G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.492+31G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1533+31G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1653+31G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1653+31G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1707+31G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1494+31G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4285
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2780
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8343
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7602
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6019
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4266
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6154
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21023
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13393
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4612
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/16-1394356-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394356
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394356
    reference: chr 16
allele count: 1
allele frequency: 8.285690612312537e-6
allele num: 120690
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.492+38C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1518+38C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1707+38C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1533+38C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1494+38C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1602+38C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1653+38C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1653+38C>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9325
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9220
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6022
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7100
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3285
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6074
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

16-1394356-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394356
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394356
    reference: chr 16
allele count: 60
allele frequency: 4.971414367387521e-4
allele num: 120690
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.492+38C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1653+38C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1494+38C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1602+38C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1533+38C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1518+38C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1707+38C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1653+38C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4290
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7606
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6022
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7100
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9325
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8363
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9220
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3672
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4283
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum

16-1394357-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394357
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394356
    reference: chr 16
allele count: 1
allele frequency: 8.286377195889957e-6
allele num: 120680
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.492+40delT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1707+40delT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1533+40delT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1518+40delT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1494+40delT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1653+40delT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1653+40delT
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1602+40delT
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7616
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7078
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8364
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6020
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9351
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6077
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: CT
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

16-1394359-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394359
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394359
    reference: chr 16
allele count: 2
allele frequency: 1.657385308936622e-5
allele num: 120672
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1533+41C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1707+41C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1518+41C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.492+41C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1653+41C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1653+41C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1602+41C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1494+41C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9231
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6032
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7616
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7160
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9247
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4283
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6033
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12229
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21036
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

16-1394364-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394364
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394364
    reference: chr 16
allele count: 1
allele frequency: 8.286926544683108e-6
allele num: 120672
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1707+46C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.492+46C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1533+46C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1518+46C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1653+46C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1602+46C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1653+46C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1494+46C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9297
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7621
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7174
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6031
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8372
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3290
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2497
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6065
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

16-1394369-TCCCTGCCTTCCCGTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394369
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394354
    reference: chr 16
allele count: 1
allele frequency: 8.291461452995706e-6
allele num: 120606
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6044
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7615
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11384
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2506
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3254
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5759
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: TCCCTGCCTTCCCGTC
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

16-1394424-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394424
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394424
    reference: chr 16
allele count: 1
allele frequency: 8.258320257659592e-6
allele num: 121090
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1708-46C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1534-46C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1654-46C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1519-46C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.493-46C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1495-46C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1654-46C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1603-46C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4787
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5321
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6448
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7244
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3208
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1992
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

16-1394430-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394430
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394430
    reference: chr 16
allele count: 45375
allele frequency: 3.751550227366681e-1
allele num: 120950
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1534-40C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.493-40C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1603-40C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1519-40C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1654-40C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1495-40C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1654-40C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1708-40C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 197
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 9.25e1
  variant carriers: 728
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.25e1
  variant carriers: 110
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 3.75e1
  variant carriers: 2017
genotype depth: GenotypeDepth
  all individuals: 6163
  bin: 6.25e1
  variant carriers: 3746
genotype depth: GenotypeDepth
  all individuals: 5121
  bin: 4.25e1
  variant carriers: 2880
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 4889
  bin: 6.75e1
  variant carriers: 3015
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 8.25e1
  variant carriers: 1410
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 8.75e1
  variant carriers: 1055
genotype depth: GenotypeDepth
  all individuals: 6347
  bin: 4.75e1
  variant carriers: 3736
genotype depth: GenotypeDepth
  all individuals: 6832
  bin: 5.75e1
  variant carriers: 4023
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 3.25e1
  variant carriers: 1128
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 2.25e1
  variant carriers: 307
genotype depth: GenotypeDepth
  all individuals: 3907
  bin: 7.25e1
  variant carriers: 2429
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 9.75e1
  variant carriers: 2617
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 2.75e1
  variant carriers: 643
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 7.75e1
  variant carriers: 1819
genotype depth: GenotypeDepth
  all individuals: 7094
  bin: 5.25e1
  variant carriers: 4196
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 6.25e1
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 8.25e1
  variant carriers: 129
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.75e1
  variant carriers: 29
num of homozygotes: 9378
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum

16-1394431-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394431
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394431
    reference: chr 16
allele count: 113
allele frequency: 9.328358208955224e-4
allele num: 121136
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1708-39C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1654-39C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.493-39C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1654-39C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1603-39C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1495-39C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1519-39C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1534-39C>G
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4951
  bin: 6.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 7048
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 4206
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6078
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 6282
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 5025
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6868
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3492
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 817
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP

16-1394436-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394436
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394436
    reference: chr 16
allele count: 1
allele frequency: 8.255184255712587e-6
allele num: 121136
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1495-34A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.493-34A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1603-34A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1519-34A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1708-34A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1654-34A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1654-34A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1534-34A>G
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6869
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5030
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4953
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7042
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6080
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4207
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2257
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 825
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1216
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD

16-1394440-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394440
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394440
    reference: chr 16
allele count: 264
allele frequency: 2.179296681525508e-3
allele num: 121140
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1519-30A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1495-30A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1603-30A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1654-30A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.493-30A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1654-30A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1708-30A>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1534-30A>G
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 7.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 5018
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 9.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6265
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 8.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 6865
  bin: 5.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 7034
  bin: 5.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 6078
  bin: 6.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 4232
  bin: 9.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 8.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 7.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 4952
  bin: 6.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 954
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 1
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD

16-1394442-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394442
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394442
    reference: chr 16
allele count: 1
allele frequency: 8.254230293025175e-6
allele num: 121150
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1534-28C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1495-28C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1654-28C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.493-28C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1519-28C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1654-28C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1708-28C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1603-28C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5017
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3487
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3066
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4234
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6074
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4949
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7032
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6865
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1001
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS

16-1394579-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394579
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394579
    reference: chr 16
allele count: 1
allele frequency: 8.253140319891718e-6
allele num: 121166
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1576-23G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1711-23G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1711-23G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1591-23G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.550-23G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1660-23G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1765-23G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1552-23G>C
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4187
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2183
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3393
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3932
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19945
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2798
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29859
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2644
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8815
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP

16-1394450-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394450
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394450
    reference: chr 16
allele count: 1
allele frequency: 8.254230293025175e-6
allele num: 121150
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1534-20C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1603-20C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1654-20C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1519-20C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.493-20C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1654-20C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1495-20C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1708-20C>G
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3487
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6073
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4950
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6867
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5022
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4234
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7033
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3066
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

16-1394457-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394457
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394457
    reference: chr 16
allele count: 1
allele frequency: 8.252731654177533e-6
allele num: 121172
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1603-13G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1654-13G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1519-13G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1534-13G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.493-13G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1495-13G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1708-13G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1654-13G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7033
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4234
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5025
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3066
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6074
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4951
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6868
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3487
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54174
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1090
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

16-1394464-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394464
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394464
    reference: chr 16
allele count: 4
allele frequency: 3.300874731803928e-5
allele num: 121180
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1534-6T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1603-6T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1495-6T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.493-6T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1654-6T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1519-6T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1708-6T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1654-6T>C
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6867
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3067
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4954
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6074
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7032
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4235
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54176
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
hgvs: c.1708-6T>C
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

16-1394466-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394466
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394466
    reference: chr 16
allele count: 5
allele frequency: 4.126025317291347e-5
allele num: 121182
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1534-4G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1495-4G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1708-4G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.493-4G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1519-4G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1654-4G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1603-4G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1654-4G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3485
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6075
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6868
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3068
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4953
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7032
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4235
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3920
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1100
  bin: 6.25e1
  variant carriers: 0
hgvs: c.1708-4G>A
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum

16-1394467-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394467
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394467
    reference: chr 16
allele count: 6
allele frequency: 4.951066954928787e-5
allele num: 121186
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1708-3C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.493-3C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1654-3C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1534-3C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1603-3C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1495-3C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1519-3C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1654-3C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3070
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7031
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4953
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3920
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6867
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6073
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: c.1708-3C>T
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD

16-1394472-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394472
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394472
    reference: chr 16
allele count: 1
allele frequency: 8.251642076773278e-6
allele num: 121188
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1710A>G
  hgvsp: ENST00000324385.5:c.1710A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1656A>G
  hgvsp: ENST00000397488.2:c.1656A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1656A>G
  hgvsp: ENST00000397489.1:c.1656A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1521A>G
  hgvsp: ENST00000568887.1:c.1521A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1497A>G
  hgvsp: ENST00000421665.2:c.1497A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1605A>G
  hgvsp: ENST00000426824.3:c.1605A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1536A>G
  hgvsp: ENST00000562208.1:c.1536A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.495A>G
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6267
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4953
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3920
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7033
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6075
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3070
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6870
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54182
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
hgvs: c.1710A>G
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

16-1394473-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394473
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394473
    reference: chr 16
allele count: 3
allele frequency: 2.47537006782514e-5
allele num: 121194
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1522G>A
  hgvsp: ENSP00000457644.1:p.Gly508Ser
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1498G>A
  hgvsp: ENSP00000409533.2:p.Gly500Ser
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1657G>A
  hgvsp: ENSP00000380625.2:p.Gly553Ser
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1657G>A
  hgvsp: ENSP00000380626.1:p.Gly553Ser
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1711G>A
  hgvsp: ENSP00000324510.5:p.Gly571Ser
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.496G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1606G>A
  hgvsp: ENSP00000407242.3:p.Gly536Ser
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1537G>A
  hgvsp: ENSP00000458134.1:p.Gly513Ser
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3481
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6870
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6267
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3070
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6074
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4953
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7034
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly571Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

16-1394479-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394479
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394479
    reference: chr 16
allele count: 1
allele frequency: 8.25000825000825e-6
allele num: 121212
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1717C>T
  hgvsp: ENSP00000324510.5:p.Arg573Cys
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1543C>T
  hgvsp: ENSP00000458134.1:p.Arg515Cys
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1663C>T
  hgvsp: ENSP00000380626.1:p.Arg555Cys
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1663C>T
  hgvsp: ENSP00000380625.2:p.Arg555Cys
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.502C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1504C>T
  hgvsp: ENSP00000409533.2:p.Arg502Cys
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1528C>T
  hgvsp: ENSP00000457644.1:p.Arg510Cys
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1612C>T
  hgvsp: ENSP00000407242.3:p.Arg538Cys
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6076
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6265
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4954
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6871
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3070
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3920
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7035
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1218
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg573Cys
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP

16-1394480-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394480
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394480
    reference: chr 16
allele count: 2
allele frequency: 1.649865535958819e-5
allele num: 121222
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1544G>A
  hgvsp: ENSP00000458134.1:p.Arg515His
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1505G>A
  hgvsp: ENSP00000409533.2:p.Arg502His
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1613G>A
  hgvsp: ENSP00000407242.3:p.Arg538His
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.503G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1718G>A
  hgvsp: ENSP00000324510.5:p.Arg573His
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1664G>A
  hgvsp: ENSP00000380625.2:p.Arg555His
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1664G>A
  hgvsp: ENSP00000380626.1:p.Arg555His
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1529G>A
  hgvsp: ENSP00000457644.1:p.Arg510His
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6871
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7035
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6266
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3070
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3479
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4238
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6075
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4955
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5019
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54188
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg573His
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

16-1394490-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1394490
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1394490
    reference: chr 16
allele count: 10
allele frequency: 8.248647221855615e-5
allele num: 121232
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.1623C>T
  hgvsp: ENST00000426824.3:c.1623C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.1515C>T
  hgvsp: ENST00000421665.2:c.1515C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.1728C>T
  hgvsp: ENST00000324385.5:c.1728C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.1554C>T
  hgvsp: ENST00000562208.1:c.1554C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000568198
  gene symbol: BAIAP3
  hgvsc: ENST00000568198.1:n.513C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.1539C>T
  hgvsp: ENST00000568887.1:c.1539C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.1674C>T
  hgvsp: ENST00000397488.2:c.1674C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.1674C>T
  hgvsp: ENST00000397489.1:c.1674C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6267
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4954
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7034
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6872
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Tyr576Tyr
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 394
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3640
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3125
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4164
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12273
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2457
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20950
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 8.707767328456984e-5
allele num: 11484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9936
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.064e1

FS
type: SiteQuality
SIO_000300: 2.871e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.108e0

DP
type: SiteQuality
SIO_000300: 2.294235e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.99e-1

MQ
type: SiteQuality
SIO_000300: 5.987e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.97e0

GenotypeQuality
all individuals: 4187
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2464
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12616
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3160
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10006
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64726
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.083465141744738e-5
allele num: 16438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.299093e6

MQRankSum
type: SiteQuality
SIO_000300: 1.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.42e-1

MQ
type: SiteQuality
SIO_000300: 5.927e1

VQSLOD
type: SiteQuality
SIO_000300: 1.86e-1

FS
type: SiteQuality
SIO_000300: 3.274e0

QD
type: SiteQuality
SIO_000300: 9.050000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.369e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.74e-1

GenotypeQuality
all individuals: 2460
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1312
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5837
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4176
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4486
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12560
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20957
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3645
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10006
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.084945843981989e-5
allele num: 16434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64710
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.827e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e0

MQRankSum
type: SiteQuality
SIO_000300: -1.37e0

VQSLOD
type: SiteQuality
SIO_000300: -7.75e-1

QD
type: SiteQuality
SIO_000300: 1.01e1

MQ
type: SiteQuality
SIO_000300: 5.988e1

DP
type: SiteQuality
SIO_000300: 2.299568e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.15e0

GenotypeQuality
all individuals: 192
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5946
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12937
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4524
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3650
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3189
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2472
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10044
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.083089255433945e-5
allele num: 64870
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.302682e6

MQRankSum
type: SiteQuality
SIO_000300: 5.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.65e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.62e-1

QD
type: SiteQuality
SIO_000300: 1.303e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.11e-1

GenotypeQuality
all individuals: 13240
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1120
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5996
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20966
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4206
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2476
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4537
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10092
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65014
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.168224299065421e-4
allele num: 8560
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.2e-1

FS
type: SiteQuality
SIO_000300: 2.594e0

QD
type: SiteQuality
SIO_000300: 1.135e1

DP
type: SiteQuality
SIO_000300: 2.308323e6

MQRankSum
type: SiteQuality
SIO_000300: -3.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.94e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

GenotypeQuality
all individuals: 227
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4551
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20970
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 208
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2485
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1072
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6038
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4210
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3659
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537137235612395e-5
allele num: 65056
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.683570684265369e-5
allele num: 11516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10106
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.89e-1

QD
type: SiteQuality
SIO_000300: 1.237e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

FS
type: SiteQuality
SIO_000300: 5.87e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
type: SiteQuality
SIO_000300: 2.309553e6

VQSLOD
type: SiteQuality
SIO_000300: 6.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.461e0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4212
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4564
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3230
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13450
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3660
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10128
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.143072150382407e-5
allele num: 65114
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.267e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.02e0

FS
type: SiteQuality
SIO_000300: 1.267e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

DP
type: SiteQuality
SIO_000300: 2.310891e6

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.64e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

GenotypeQuality
all individuals: 4564
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2485
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20975
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3660
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4212
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3230
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10128
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535768037595602e-5
allele num: 65114
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.267e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

QD
type: SiteQuality
SIO_000300: 1.267e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: 4.02e0

DP
type: SiteQuality
SIO_000300: 2.310891e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.64e0

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

GenotypeQuality
all individuals: 3261
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4591
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13746
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.965408805031447e-4
allele num: 10176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.069434328720563e-5
allele num: 16476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65262
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.49e0

DP
type: SiteQuality
SIO_000300: 2.31586e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.8e-2

QD
type: SiteQuality
SIO_000300: 1.339e1

MQ
type: SiteQuality
SIO_000300: 5.955e1

GenotypeQuality
all individuals: 120
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6165
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3276
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2496
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20991
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4256
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13917
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212121212121212e-4
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

DP
type: SiteQuality
SIO_000300: 2.320894e6

FS
type: SiteQuality
SIO_000300: 6.054e0

QD
type: SiteQuality
SIO_000300: 1.266e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.23e-1

MQ
type: SiteQuality
SIO_000300: 5.947e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.61e-1

GenotypeQuality
all individuals: 92
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4261
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4615
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2499
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20996
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.525413387027885e-5
allele num: 65556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.223e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 9.76e-1

DP
type: SiteQuality
SIO_000300: 2.322641e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.374e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

VQSLOD
type: SiteQuality
SIO_000300: 2.46e0

MQRankSum
type: SiteQuality
SIO_000300: -4.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-1

GenotypeQuality
all individuals: 89
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14008
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4264
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2500
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20996
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4616
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3278
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52494815176284e-5
allele num: 65576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.144e0

FS
type: SiteQuality
SIO_000300: 4.13e-1

MQ
type: SiteQuality
SIO_000300: 5.895e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.021e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.082e0

DP
type: SiteQuality
SIO_000300: 2.323243e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

QD
type: SiteQuality
SIO_000300: 1.119e1

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14050
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variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
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GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 20992
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variant carriers: 1

GenotypeQuality
all individuals: 6217
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3672
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variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.695e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

DP
type: SiteQuality
SIO_000300: 2.324136e6

FS
type: SiteQuality
SIO_000300: 1.681e0

VQSLOD
type: SiteQuality
SIO_000300: 9.93e-1

QD
type: SiteQuality
SIO_000300: 1.083e1

MQRankSum
type: SiteQuality
SIO_000300: 2.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

GenotypeQuality
all individuals: 6232
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3288
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variant carriers: 0

GenotypeQuality
all individuals: 83
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 70
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2500
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.738994935722633e-5
allele num: 10268
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522904483430799e-5
allele num: 65664
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.324841e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.018e0

QD
type: SiteQuality
SIO_000300: 1.223e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.72e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.798e0

GenotypeQuality
all individuals: 20996
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2499
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6255
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14232
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.558162149021514e-5
allele num: 65816
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.08e1

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.842e0

FS
type: SiteQuality
SIO_000300: 5.25e-1

DP
type: SiteQuality
SIO_000300: 2.327932e6

MQ
type: SiteQuality
SIO_000300: 5.968e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.06e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 3678
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65840
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.327745e6

MQRankSum
type: SiteQuality
SIO_000300: -4.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.44e-1

FS
type: SiteQuality
SIO_000300: 9.458e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.947e0

VQSLOD
type: SiteQuality
SIO_000300: -2.569e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.442e1

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4633
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GenotypeQuality
all individuals: 69
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GenotypeQuality
all individuals: 4276
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
all individuals: 494
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GenotypeQuality
all individuals: 2502
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GenotypeQuality
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GenotypeQuality
all individuals: 14240
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GenotypeQuality
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GenotypeQuality
all individuals: 23
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GenotypeQuality
all individuals: 20997
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GenotypeQuality
all individuals: 3304
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65876
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.701202949165696e-5
allele num: 10308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

MQRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.307e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -7.18e-1

DP
type: SiteQuality
SIO_000300: 2.328357e6

FS
type: SiteQuality
SIO_000300: 2.673e0

VQSLOD
type: SiteQuality
SIO_000300: 8.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.74e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3680
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GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
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GenotypeQuality
all individuals: 2
bin: 2.5e0
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GenotypeQuality
all individuals: 29
bin: 3.75e1
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GenotypeQuality
all individuals: 21002
bin: 9.75e1
variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 14
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4634
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GenotypeQuality
all individuals: 55
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.535833081342606e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.030762236702531e-5
allele num: 65990
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.64e0

QD
type: SiteQuality
SIO_000300: 1.329e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 2.330029e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.94e-1

MQ
type: SiteQuality
SIO_000300: 5.937e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5
bin: 1.25e1
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GenotypeQuality
all individuals: 2503
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.682416731216112e-5
allele num: 10328
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66116
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

VQSLOD
type: SiteQuality
SIO_000300: -1.961e0

QD
type: SiteQuality
SIO_000300: 1.056e1

MQ
type: SiteQuality
SIO_000300: 5.833e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e0

DP
type: SiteQuality
SIO_000300: 2.331349e6

FS
type: SiteQuality
SIO_000300: 2.251e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.232e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.022974607013301e-5
allele num: 66160
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.54e0

FS
type: SiteQuality
SIO_000300: 3.39e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.02e0

VQSLOD
type: SiteQuality
SIO_000300: 6.62e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.69e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

DP
type: SiteQuality
SIO_000300: 2.332114e6

QD
type: SiteQuality
SIO_000300: 1.203e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.064e0

MQRankSum
type: SiteQuality
SIO_000300: -2.1e-1

FS
type: SiteQuality
SIO_000300: 5.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.12e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.24e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

DP
type: SiteQuality
SIO_000300: 2.332145e6

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510072181450273e-5
allele num: 66222
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.754e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 2.332724e6

VQSLOD
type: SiteQuality
SIO_000300: 2.43e0

MQRankSum
type: SiteQuality
SIO_000300: 2.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.64e-1

MQ
type: SiteQuality
SIO_000300: 5.779e1

QD
type: SiteQuality
SIO_000300: 1.528e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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FS
type: SiteQuality
SIO_000300: 3.666e0

VQSLOD
type: SiteQuality
SIO_000300: 9.75e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.016682252858306e-5
allele num: 66298
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
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Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.848e0

MQRankSum
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InbreedingCoeff
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MQ
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.837e0

QD
type: SiteQuality
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VQSLOD
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SIO_000300: 1.97e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.508159140952553e-5
allele num: 66306
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
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African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 904
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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VQSLOD
type: SiteQuality
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MQRankSum
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ReadPosRankSum
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QD
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ClippingRankSum
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MQ
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FS
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DP
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.508022680661117e-5
allele num: 66312
num of homozygotes: 0

African
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Other
type: Population
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South Asian
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allele count: 4
allele frequency: 2.422774076317383e-4
allele num: 16510
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InbreedingCoeff
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FS
type: SiteQuality
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ClippingRankSum
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QD
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VQSLOD
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DP
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MQ
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66332
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.72e-1

MQ
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.08e-1

InbreedingCoeff
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DP
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FS
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MQRankSum
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QD
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.26e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66324
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -2.0e-4

BaseQRankSum
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MQ
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SIO_000300: 5.857e1

DP
type: SiteQuality
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MQRankSum
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ClippingRankSum
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QD
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FS
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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South Asian
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African
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FS
type: SiteQuality
SIO_000300: 2.6677e1

InbreedingCoeff
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VQSLOD
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MQRankSum
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DP
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ClippingRankSum
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MQ
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BaseQRankSum
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QD
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ReadPosRankSum
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SIO_000300: 2.6e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.013772942346524e-5
allele num: 66362
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.922e0

MQRankSum
type: SiteQuality
SIO_000300: -4.8e-2

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.11e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.54e-1

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.33468e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 904
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.506432466632521e-5
allele num: 66382
num of homozygotes: 0

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.851e0

BaseQRankSum
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SIO_000300: 1.56e0

ClippingRankSum
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SIO_000300: -1.647e0

ReadPosRankSum
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DP
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
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allele num: 10362
num of homozygotes: 0

Other
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allele num: 904
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.012592637223595e-5
allele num: 66388
num of homozygotes: 0

East Asian
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allele num: 8640
num of homozygotes: 0

South Asian
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QD
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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FS
type: SiteQuality
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DP
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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European (Non-Finnish)
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Latino
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African
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Other
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MQ
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VQSLOD
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MQRankSum
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QD
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FS
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

South Asian
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African
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European (Non-Finnish)
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European (Finnish)
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East Asian
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Other
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MQRankSum
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QD
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InbreedingCoeff
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DP
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VQSLOD
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MQ
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BaseQRankSum
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FS
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
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num of homozygotes: 0

African
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allele num: 10354
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Other
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South Asian
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Latino
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East Asian
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European (Finnish)
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MQRankSum
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DP
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 5.977e1

QD
type: SiteQuality
SIO_000300: 1.291e1

FS
type: SiteQuality
SIO_000300: 1.588e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.98e0

GenotypeQuality
all individuals: 55
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.918e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.87e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.502e0

MQRankSum
type: SiteQuality
SIO_000300: -3.09e-1

FS
type: SiteQuality
SIO_000300: 1.4407e1

QD
type: SiteQuality
SIO_000300: 1.435e1

DP
type: SiteQuality
SIO_000300: 2.333148e6

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4638
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66364
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.333087e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.99e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.584e-1

FS
type: SiteQuality
SIO_000300: 6.894e0

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

QD
type: SiteQuality
SIO_000300: 9.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3684
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2503
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66364
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

FS
type: SiteQuality
SIO_000300: 6.894e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.99e-1

DP
type: SiteQuality
SIO_000300: 2.333087e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQ
type: SiteQuality
SIO_000300: 5.944e1

QD
type: SiteQuality
SIO_000300: 9.15e0

VQSLOD
type: SiteQuality
SIO_000300: -2.584e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 21008
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 14373
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817080557238038e-4
allele num: 16510
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.206e0

DP
type: SiteQuality
SIO_000300: 2.332791e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.62e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.25e-1

QD
type: SiteQuality
SIO_000300: 1.309e1

FS
type: SiteQuality
SIO_000300: 5.53e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2503
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.658103148541626e-5
allele num: 10354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.883e0

DP
type: SiteQuality
SIO_000300: 2.332269e6

MQRankSum
type: SiteQuality
SIO_000300: 1.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.127e0

VQSLOD
type: SiteQuality
SIO_000300: -2.256e0

MQ
type: SiteQuality
SIO_000300: 5.941e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 9.01e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507295309296997e-5
allele num: 66344
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.38e0

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.616e1

MQRankSum
type: SiteQuality
SIO_000300: -1.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 2.619e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.7e-2

DP
type: SiteQuality
SIO_000300: 2.331983e6

MQ
type: SiteQuality
SIO_000300: 5.943e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.2723e1

MQRankSum
type: SiteQuality
SIO_000300: -9.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e-1

BaseQRankSum
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SIO_000300: -1.285e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 1.437e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.88e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.807e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66232
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.659508139937652e-5
allele num: 11548
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.281e1

MQ
type: SiteQuality
SIO_000300: 5.899e1

VQSLOD
type: SiteQuality
SIO_000300: -9.088000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.29e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

FS
type: SiteQuality
SIO_000300: 6.931e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.576e0

DP
type: SiteQuality
SIO_000300: 2.327254e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 21035
bin: 9.75e1
variant carriers: 34

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 28
allele frequency: 2.708454246469337e-3
allele num: 10338
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.039923896958899e-5
allele num: 66226
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.73190162798753e-4
allele num: 11548
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.327925e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

QD
type: SiteQuality
SIO_000300: 1.553e1

MQ
type: SiteQuality
SIO_000300: 5.951e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.97e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.07e-1

GenotypeQuality
all individuals: 6189
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2496
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4608
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4264
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21030
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 3680
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.678668215253581e-5
allele num: 10332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.039923896958899e-5
allele num: 66226
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.88e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.628e0

MQ
type: SiteQuality
SIO_000300: 5.937e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

QD
type: SiteQuality
SIO_000300: 1.382e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.39e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.21e-1

DP
type: SiteQuality
SIO_000300: 2.328066e6

GenotypeQuality
all individuals: 239
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21030
bin: 9.75e1
variant carriers: 14

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4264
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3282
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3680
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66226
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 9.678668215253581e-4
allele num: 10332
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.463803255975061e-4
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.21e-1

QD
type: SiteQuality
SIO_000300: 1.382e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.628e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e-1

MQ
type: SiteQuality
SIO_000300: 5.937e1

VQSLOD
type: SiteQuality
SIO_000300: 2.88e0

DP
type: SiteQuality
SIO_000300: 2.328066e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

GenotypeQuality
all individuals: 174
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4270
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21021
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 83
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3284
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13287
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2498
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6161
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510847887834653e-5
allele num: 66188
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 2.33e0

VQSLOD
type: SiteQuality
SIO_000300: 2.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.38e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.36e-1

DP
type: SiteQuality
SIO_000300: 2.326347e6

QD
type: SiteQuality
SIO_000300: 1.539e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.923e0

GenotypeQuality
all individuals: 474
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
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variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3288
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2498
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3679
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.043208943949237e-5
allele num: 66190
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.952e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.216e0

FS
type: SiteQuality
SIO_000300: 1.4555e1

MQRankSum
type: SiteQuality
SIO_000300: 1.51e-1

DP
type: SiteQuality
SIO_000300: 2.326648e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.89e-1

QD
type: SiteQuality
SIO_000300: 1.507e1

VQSLOD
type: SiteQuality
SIO_000300: -1.787e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

GenotypeQuality
all individuals: 4603
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12634
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3672
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21061
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4283
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2498
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.67305088024763e-5
allele num: 10338
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.58e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

QD
type: SiteQuality
SIO_000300: 1.27e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

FS
type: SiteQuality
SIO_000300: 1.244e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.337e0

DP
type: SiteQuality
SIO_000300: 2.324816e6

GenotypeQuality
all individuals: 6074
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2498
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12634
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3285
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21061
bin: 9.75e1
variant carriers: 60

GenotypeQuality
all individuals: 396
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4603
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.662837102430765e-4
allele num: 66152
num of homozygotes: 0

East Asian
type: Population
allele count: 49
allele frequency: 5.671296296296297e-3
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.27e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQ
type: SiteQuality
SIO_000300: 5.96e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.58e0

FS
type: SiteQuality
SIO_000300: 1.244e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.337e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.72e-1

DP
type: SiteQuality
SIO_000300: 2.324816e6

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-2

GenotypeQuality
all individuals: 96
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12751
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
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variant carriers: 0

GenotypeQuality
all individuals: 4282
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21036
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2498
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3678
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3292
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4608
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66152
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.674922600619196e-5
allele num: 10336
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.373e0

VQSLOD
type: SiteQuality
SIO_000300: 2.1e0

QD
type: SiteQuality
SIO_000300: 1.506e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.899e1

MQRankSum
type: SiteQuality
SIO_000300: -4.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.64e-1

DP
type: SiteQuality
SIO_000300: 2.324728e6

GenotypeQuality
all individuals: 40
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3677
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3277
bin: 7.25e1
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GenotypeQuality
all individuals: 2498
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
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variant carriers: 0

GenotypeQuality
all individuals: 336
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GenotypeQuality
all individuals: 249
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variant carriers: 0

GenotypeQuality
all individuals: 324
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variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4606
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.023614428688054e-5
allele num: 66146
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.098e0

QD
type: SiteQuality
SIO_000300: 1.36e1

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 8.997999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: 2.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.29e-1

DP
type: SiteQuality
SIO_000300: 2.324504e6

GenotypeQuality
all individuals: 3682
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4626
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
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GenotypeQuality
all individuals: 12442
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4292
bin: 8.25e1
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GenotypeQuality
all individuals: 21036
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 246
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.514233797698365e-4
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66148
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.147e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.09e-1

DP
type: SiteQuality
SIO_000300: 2.324811e6

QD
type: SiteQuality
SIO_000300: 1.48e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.72e-1

GenotypeQuality
all individuals: 4298
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3692
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21048
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 52
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4644
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.327178e6

MQ
type: SiteQuality
SIO_000300: 5.283e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.924e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-1

FS
type: SiteQuality
SIO_000300: 1.139e0

MQRankSum
type: SiteQuality
SIO_000300: -3.178e0

QD
type: SiteQuality
SIO_000300: 3.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.41e-1

GenotypeQuality
all individuals: 83
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1530
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1191
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51006
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1273
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 905
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66492
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.122e0

MQ
type: SiteQuality
SIO_000300: 5.933e1

QD
type: SiteQuality
SIO_000300: 1.656e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

FS
type: SiteQuality
SIO_000300: 8.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.77e-1

DP
type: SiteQuality
SIO_000300: 3.42665e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

GenotypeQuality
all individuals: 97
bin: 5.25e1
variant carriers: 55

GenotypeQuality
all individuals: 583
bin: 8.75e1
variant carriers: 108

GenotypeQuality
all individuals: 464
bin: 6.75e1
variant carriers: 101

GenotypeQuality
all individuals: 92
bin: 3.25e1
variant carriers: 28

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 25

GenotypeQuality
all individuals: 55912
bin: 9.75e1
variant carriers: 34939

GenotypeQuality
all individuals: 97
bin: 4.75e1
variant carriers: 45

GenotypeQuality
all individuals: 568
bin: 7.75e1
variant carriers: 136

GenotypeQuality
all individuals: 773
bin: 9.25e1
variant carriers: 172

GenotypeQuality
all individuals: 371
bin: 7.25e1
variant carriers: 75

GenotypeQuality
all individuals: 84
bin: 2.25e1
variant carriers: 20

GenotypeQuality
all individuals: 96
bin: 5.75e1
variant carriers: 52

South Asian
type: Population
allele count: 4616
allele frequency: 2.796558827093178e-1
allele num: 16506
num of homozygotes: 670

East Asian
type: Population
allele count: 1843
allele frequency: 2.142026964202697e-1
allele num: 8604
num of homozygotes: 207

Latino
type: Population
allele count: 7112
allele frequency: 6.175755470649531e-1
allele num: 11516
num of homozygotes: 2233

European (Non-Finnish)
type: Population
allele count: 26680
allele frequency: 4.014807235079905e-1
allele num: 66454
num of homozygotes: 5390

European (Finnish)
type: Population
allele count: 3001
allele frequency: 4.546969696969697e-1
allele num: 6600
num of homozygotes: 671

African
type: Population
allele count: 1815
allele frequency: 1.750578703703704e-1
allele num: 10368
num of homozygotes: 158

Other
type: Population
allele count: 308
allele frequency: 3.414634146341464e-1
allele num: 902
num of homozygotes: 49

VQSLOD
type: SiteQuality
SIO_000300: 4.66e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.56e-1

DP
type: SiteQuality
SIO_000300: 3.670852e6

MQ
type: SiteQuality
SIO_000300: 5.945e1

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.906e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.41e-1

GenotypeQuality
all individuals: 669
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54150
bin: 9.75e1
variant carriers: 113

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 817
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1202
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513317191283293e-4
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.645061728395061e-5
allele num: 10368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.458412588621823e-4
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 107
allele frequency: 1.608248662297842e-3
allele num: 66532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

FS
type: SiteQuality
SIO_000300: 5.629999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.400000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.716e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQ
type: SiteQuality
SIO_000300: 5.946e1

MQRankSum
type: SiteQuality
SIO_000300: 2.26e-1

DP
type: SiteQuality
SIO_000300: 3.671797e6

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 957
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54142
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 941
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 821
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.84e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.29e-1

FS
type: SiteQuality
SIO_000300: 3.072e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.715e0

DP
type: SiteQuality
SIO_000300: 3.6723e6

MQ
type: SiteQuality
SIO_000300: 5.844e1

QD
type: SiteQuality
SIO_000300: 1.535e1

GenotypeQuality
all individuals: 83
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1214
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54170
bin: 9.75e1
variant carriers: 263

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 2.893518518518518e-4
allele num: 10368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 239
allele frequency: 3.592148375266781e-3
allele num: 66534
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 19
allele frequency: 2.875302663438257e-3
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

DP
type: SiteQuality
SIO_000300: 3.676016e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.1e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.311e0

QD
type: SiteQuality
SIO_000300: 1.38e1

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 959
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54165
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 1214
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 528
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variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 821
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502765087761481e-5
allele num: 66544
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.93e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.327e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.509e0

DP
type: SiteQuality
SIO_000300: 3.676501e6

MQRankSum
type: SiteQuality
SIO_000300: 1.94e-1

QD
type: SiteQuality
SIO_000300: 3.155e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.59e-1

FS
type: SiteQuality
SIO_000300: 1.7353e1

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4110
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2065
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5581
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3883
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3176
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502223290469895e-5
allele num: 66568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.502e0

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.05e0

MQ
type: SiteQuality
SIO_000300: 5.799e1

VQSLOD
type: SiteQuality
SIO_000300: -1.672e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.529e1

DP
type: SiteQuality
SIO_000300: 4.638665e6

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 822
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 967
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1054
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1211
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 522
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54172
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502855425308085e-5
allele num: 66540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.677334e6

FS
type: SiteQuality
SIO_000300: 2.931e0

QD
type: SiteQuality
SIO_000300: 3.326e1

VQSLOD
type: SiteQuality
SIO_000300: -2.964e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.981e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-2

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502494140272853e-5
allele num: 66556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.881e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.366e0

FS
type: SiteQuality
SIO_000300: 3.05e0

QD
type: SiteQuality
SIO_000300: 1.348e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.744e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -9.89e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.42e-1

DP
type: SiteQuality
SIO_000300: 3.677933e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.73e-1

GenotypeQuality
all individuals: 1215
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.422480620155039e-4
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66566
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.94e-1

FS
type: SiteQuality
SIO_000300: 2.753e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.6e-1

QD
type: SiteQuality
SIO_000300: 1.605e1

MQ
type: SiteQuality
SIO_000300: 5.974e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.9e0

DP
type: SiteQuality
SIO_000300: 3.678426e6

GenotypeQuality
all individuals: 108
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 54177
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1215
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66566
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.78168362627197e-4
allele num: 8648
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 3.678591e6

FS
type: SiteQuality
SIO_000300: 1.246e0

MQ
type: SiteQuality
SIO_000300: 5.94e1

VQSLOD
type: SiteQuality
SIO_000300: -2.049e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.14e-1

QD
type: SiteQuality
SIO_000300: 2.174e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.97e0

MQRankSum
type: SiteQuality
SIO_000300: 7.0e-3

GenotypeQuality
all individuals: 823
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 6.938020351526364e-4
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.82e-1

MQ
type: SiteQuality
SIO_000300: 5.916e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.692e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.76e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.77e-1

DP
type: SiteQuality
SIO_000300: 3.67892e6

FS
type: SiteQuality
SIO_000300: 4.534e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e-1

QD
type: SiteQuality
SIO_000300: 1.196e1

GenotypeQuality
all individuals: 707
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1110
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variant carriers: 0

GenotypeQuality
all individuals: 109
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variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.643201542912247e-5
allele num: 10370
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66572
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.36e-1

FS
type: SiteQuality
SIO_000300: 1.115e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.759e0

VQSLOD
type: SiteQuality
SIO_000300: -2.862e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.65e0

DP
type: SiteQuality
SIO_000300: 3.679312e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

QD
type: SiteQuality
SIO_000300: 1.26e1

MQ
type: SiteQuality
SIO_000300: 5.599e1

GenotypeQuality
all individuals: 709
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 42
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 54181
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1108
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.004085556356645e-5
allele num: 66576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.641342074816814e-5
allele num: 10372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.762e0

DP
type: SiteQuality
SIO_000300: 3.679391e6

FS
type: SiteQuality
SIO_000300: 2.956e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.912e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.305e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

MQRankSum
type: SiteQuality
SIO_000300: -1.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

QD
type: SiteQuality
SIO_000300: 2.706e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 828
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GenotypeQuality
all individuals: 13
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501681883709755e-5
allele num: 66592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.348e0

MQRankSum
type: SiteQuality
SIO_000300: 2.19e-1

MQ
type: SiteQuality
SIO_000300: 5.92e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.11e-1

FS
type: SiteQuality
SIO_000300: 1.133e0

QD
type: SiteQuality
SIO_000300: 1.453e1

DP
type: SiteQuality
SIO_000300: 3.679822e6

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 26
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1218
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002912825440678e-5
allele num: 66602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

FS
type: SiteQuality
SIO_000300: 5.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.53e-1

DP
type: SiteQuality
SIO_000300: 3.68001e6

QD
type: SiteQuality
SIO_000300: 3.371e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.92e-1

MQ
type: SiteQuality
SIO_000300: 5.925e1

VQSLOD
type: SiteQuality
SIO_000300: -3.269e0