22-50191464-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191464
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191464
    reference: chr 22
allele count: 1
allele frequency: 9.15851558779353e-6
allele num: 109188
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.2087C>G
  hgvsp: ENSP00000385858.1:p.Ser696Cys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.872C>G
  hgvsp: ENSP00000345886.5:p.Ser291Cys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.2087C>G
  hgvsp: ENSP00000410042.2:p.Ser696Cys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.2087C>G
  hgvsp: ENSP00000216267.8:p.Ser696Cys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.983C>G
  hgvsp: ENSP00000388027.1:p.Ser328Cys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.2087C>G
  hgvsp: ENSP00000384076.1:p.Ser696Cys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1151C>G
  hgvsp: ENSP00000437514.1:p.Ser384Cys
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4587
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33066
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5220
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1601
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 813
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35527
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ser696Cys
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

22-50191473-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191473
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191473
    reference: chr 22
allele count: 1
allele frequency: 9.057642839027572e-6
allele num: 110404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.2078G>A
  hgvsp: ENSP00000384076.1:p.Arg693Gln
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.2078G>A
  hgvsp: ENSP00000385858.1:p.Arg693Gln
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.2078G>A
  hgvsp: ENSP00000216267.8:p.Arg693Gln
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.2078G>A
  hgvsp: ENSP00000410042.2:p.Arg693Gln
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.863G>A
  hgvsp: ENSP00000345886.5:p.Arg288Gln
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.974G>A
  hgvsp: ENSP00000388027.1:p.Arg325Gln
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1142G>A
  hgvsp: ENSP00000437514.1:p.Arg381Gln
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33081
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4689
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13177
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35735
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2380
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2741
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg693Gln
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

22-50191474-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191474
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191474
    reference: chr 22
allele count: 4
allele frequency: 3.602759713940879e-5
allele num: 111026
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.973C>T
  hgvsp: ENSP00000388027.1:p.Arg325Trp
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.2077C>T
  hgvsp: ENSP00000384076.1:p.Arg693Trp
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.2077C>T
  hgvsp: ENSP00000410042.2:p.Arg693Trp
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.2077C>T
  hgvsp: ENSP00000385858.1:p.Arg693Trp
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.2077C>T
  hgvsp: ENSP00000216267.8:p.Arg693Trp
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1141C>T
  hgvsp: ENSP00000437514.1:p.Arg381Trp
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.862C>T
  hgvsp: ENSP00000345886.5:p.Arg288Trp
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33170
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7208
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg693Trp
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

22-50191478-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191478
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191478
    reference: chr 22
allele count: 4
allele frequency: 3.551136363636363e-5
allele num: 112640
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.969G>A
  hgvsp: ENST00000438393.1:c.969G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.2073G>A
  hgvsp: ENST00000457780.2:c.2073G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.2073G>A
  hgvsp: ENST00000404034.1:c.2073G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.2073G>A
  hgvsp: ENST00000216267.8:c.2073G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.2073G>A
  hgvsp: ENST00000404760.1:c.2073G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1137G>A
  hgvsp: ENST00000542442.1:c.1137G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.858G>A
  hgvsp: ENST00000342989.5:c.858G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4765
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33789
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13567
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2762
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7311
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro691Pro
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD

22-50191479-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191479
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191479
    reference: chr 22
allele count: 3
allele frequency: 2.643870626597338e-5
allele num: 113470
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1136C>T
  hgvsp: ENSP00000437514.1:p.Pro379Leu
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.968C>T
  hgvsp: ENSP00000388027.1:p.Pro323Leu
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.2072C>T
  hgvsp: ENSP00000384076.1:p.Pro691Leu
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.2072C>T
  hgvsp: ENSP00000216267.8:p.Pro691Leu
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.2072C>T
  hgvsp: ENSP00000410042.2:p.Pro691Leu
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.2072C>T
  hgvsp: ENSP00000385858.1:p.Pro691Leu
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.857C>T
  hgvsp: ENSP00000345886.5:p.Pro286Leu
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4772
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3387
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34076
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2762
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7361
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4068
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 8.75e1
  variant carriers: 1
hgvs: p.Pro691Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

22-50191485-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191485
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191485
    reference: chr 22
allele count: 96
allele frequency: 8.39263546238176e-4
allele num: 114386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.962C>T
  hgvsp: ENSP00000388027.1:p.Ala321Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1130C>T
  hgvsp: ENSP00000437514.1:p.Ala377Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.2066C>T
  hgvsp: ENSP00000410042.2:p.Ala689Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.2066C>T
  hgvsp: ENSP00000384076.1:p.Ala689Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.851C>T
  hgvsp: ENSP00000345886.5:p.Ala284Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.2066C>T
  hgvsp: ENSP00000385858.1:p.Ala689Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.2066C>T
  hgvsp: ENSP00000216267.8:p.Ala689Val
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 13967
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34065
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 3.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1619
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2397
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2755
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala689Val
num of homozygotes: 1
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/22-50191487-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191487
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191487
    reference: chr 22
allele count: 1
allele frequency: 8.701705534284719e-6
allele num: 114920
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.849T>G
  hgvsp: ENST00000342989.5:c.849T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.960T>G
  hgvsp: ENST00000438393.1:c.960T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.2064T>G
  hgvsp: ENST00000404034.1:c.2064T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.2064T>G
  hgvsp: ENST00000216267.8:c.2064T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.2064T>G
  hgvsp: ENST00000457780.2:c.2064T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.2064T>G
  hgvsp: ENST00000404760.1:c.2064T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1128T>G
  hgvsp: ENST00000542442.1:c.1128T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34313
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14097
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4852
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 38064
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1633
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala688Ala
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

22-50191494-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191494
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191494
    reference: chr 22
allele count: 1
allele frequency: 8.620689655172414e-6
allele num: 116000
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.2057G>A
  hgvsp: ENSP00000216267.8:p.Arg686Gln
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.2057G>A
  hgvsp: ENSP00000385858.1:p.Arg686Gln
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1121G>A
  hgvsp: ENSP00000437514.1:p.Arg374Gln
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.2057G>A
  hgvsp: ENSP00000410042.2:p.Arg686Gln
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.953G>A
  hgvsp: ENSP00000388027.1:p.Arg318Gln
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.2057G>A
  hgvsp: ENSP00000384076.1:p.Arg686Gln
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.842G>A
  hgvsp: ENSP00000345886.5:p.Arg281Gln
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14445
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34442
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 813
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3101
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2786
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.25e1
  variant carriers: 1
hgvs: p.Arg686Gln
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

22-50191495-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191495
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191495
    reference: chr 22
allele count: 4
allele frequency: 3.441926101846593e-5
allele num: 116214
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.2056C>T
  hgvsp: ENSP00000410042.2:p.Arg686Trp
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1120C>T
  hgvsp: ENSP00000437514.1:p.Arg374Trp
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.952C>T
  hgvsp: ENSP00000388027.1:p.Arg318Trp
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.2056C>T
  hgvsp: ENSP00000385858.1:p.Arg686Trp
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.2056C>T
  hgvsp: ENSP00000384076.1:p.Arg686Trp
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.841C>T
  hgvsp: ENSP00000345886.5:p.Arg281Trp
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.2056C>T
  hgvsp: ENSP00000216267.8:p.Arg686Trp
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34553
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2785
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2448
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7505
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg686Trp
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

22-50191501-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191501
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191501
    reference: chr 22
allele count: 1
allele frequency: 8.528493697443158e-6
allele num: 117254
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.946C>T
  hgvsp: ENSP00000388027.1:p.Pro316Ser
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.2050C>T
  hgvsp: ENSP00000384076.1:p.Pro684Ser
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.2050C>T
  hgvsp: ENSP00000410042.2:p.Pro684Ser
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.835C>T
  hgvsp: ENSP00000345886.5:p.Pro279Ser
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.2050C>T
  hgvsp: ENSP00000216267.8:p.Pro684Ser
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.2050C>T
  hgvsp: ENSP00000385858.1:p.Pro684Ser
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1114C>T
  hgvsp: ENSP00000437514.1:p.Pro372Ser
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35031
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14722
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2817
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro684Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

22-50191514-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191514
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191514
    reference: chr 22
allele count: 1
allele frequency: 8.436113313874031e-6
allele num: 118538
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.933G>A
  hgvsp: ENST00000438393.1:c.933G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.822G>A
  hgvsp: ENST00000342989.5:c.822G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.2037G>A
  hgvsp: ENST00000404034.1:c.2037G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1101G>A
  hgvsp: ENST00000542442.1:c.1101G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.2037G>A
  hgvsp: ENST00000216267.8:c.2037G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.2037G>A
  hgvsp: ENST00000404760.1:c.2037G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.2037G>A
  hgvsp: ENST00000457780.2:c.2037G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35135
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15172
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1926
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1674
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser679Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

22-50191515-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191515
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191515
    reference: chr 22
allele count: 2
allele frequency: 1.683104992089406e-5
allele num: 118828
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.2036C>T
  hgvsp: ENSP00000216267.8:p.Ser679Leu
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.932C>T
  hgvsp: ENSP00000388027.1:p.Ser311Leu
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.2036C>T
  hgvsp: ENSP00000384076.1:p.Ser679Leu
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.2036C>T
  hgvsp: ENSP00000410042.2:p.Ser679Leu
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.2036C>T
  hgvsp: ENSP00000385858.1:p.Ser679Leu
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.821C>T
  hgvsp: ENSP00000345886.5:p.Ser274Leu
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1100C>T
  hgvsp: ENSP00000437514.1:p.Ser367Leu
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35243
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5174
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1780
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7804
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser679Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

22-50191523-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191523
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191523
    reference: chr 22
allele count: 1
allele frequency: 8.377314233056882e-6
allele num: 119370
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1092A>G
  hgvsp: ENST00000542442.1:c.1092A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.2028A>G
  hgvsp: ENST00000216267.8:c.2028A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.2028A>G
  hgvsp: ENST00000404034.1:c.2028A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.2028A>G
  hgvsp: ENST00000457780.2:c.2028A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.924A>G
  hgvsp: ENST00000438393.1:c.924A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.813A>G
  hgvsp: ENST00000342989.5:c.813A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.2028A>G
  hgvsp: ENST00000404760.1:c.2028A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35213
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15610
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2923
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu676Glu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

22-50191528-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191528
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191528
    reference: chr 22
allele count: 2
allele frequency: 1.666638889351844e-5
allele num: 120002
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.919T>C
  hgvsp: ENST00000438393.1:c.919T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.2023T>C
  hgvsp: ENST00000216267.8:c.2023T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.2023T>C
  hgvsp: ENST00000404034.1:c.2023T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.808T>C
  hgvsp: ENST00000342989.5:c.808T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.2023T>C
  hgvsp: ENST00000404760.1:c.2023T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.2023T>C
  hgvsp: ENST00000457780.2:c.2023T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1087T>C
  hgvsp: ENST00000542442.1:c.1087T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16049
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5762
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3101
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu675Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

22-50191532-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191532
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191532
    reference: chr 22
allele count: 24
allele frequency: 1.995244666877276e-4
allele num: 120286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.2019C>T
  hgvsp: ENST00000457780.2:c.2019C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1083C>T
  hgvsp: ENST00000542442.1:c.1083C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.2019C>T
  hgvsp: ENST00000404034.1:c.2019C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.2019C>T
  hgvsp: ENST00000404760.1:c.2019C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.2019C>T
  hgvsp: ENST00000216267.8:c.2019C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.915C>T
  hgvsp: ENST00000438393.1:c.915C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.804C>T
  hgvsp: ENST00000342989.5:c.804C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34673
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16183
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5831
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 842
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile673Ile
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

22-50191542-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191542
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191542
    reference: chr 22
allele count: 1
allele frequency: 8.295037908323241e-6
allele num: 120554
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.2009T>C
  hgvsp: ENSP00000385858.1:p.Val670Ala
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.905T>C
  hgvsp: ENSP00000388027.1:p.Val302Ala
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1073T>C
  hgvsp: ENSP00000437514.1:p.Val358Ala
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.794T>C
  hgvsp: ENSP00000345886.5:p.Val265Ala
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.2009T>C
  hgvsp: ENSP00000216267.8:p.Val670Ala
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.2009T>C
  hgvsp: ENSP00000384076.1:p.Val670Ala
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.2009T>C
  hgvsp: ENSP00000410042.2:p.Val670Ala
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34612
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2717
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1203
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 40023
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8209
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1840
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val670Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
reference allele: A
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

22-50191547-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191547
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191547
    reference: chr 22
allele count: 8
allele frequency: 6.626795447391528e-5
allele num: 120722
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.2004C>T
  hgvsp: ENST00000457780.2:c.2004C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.2004C>T
  hgvsp: ENST00000216267.8:c.2004C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.2004C>T
  hgvsp: ENST00000404760.1:c.2004C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1068C>T
  hgvsp: ENST00000542442.1:c.1068C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.2004C>T
  hgvsp: ENST00000404034.1:c.2004C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.789C>T
  hgvsp: ENST00000342989.5:c.789C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.900C>T
  hgvsp: ENST00000438393.1:c.900C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5982
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16456
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34571
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2751
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg668Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ

22-50191549-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191549
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191549
    reference: chr 22
allele count: 1
allele frequency: 8.279242283746192e-6
allele num: 120784
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.898C>T
  hgvsp: ENSP00000388027.1:p.Arg300Cys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.2002C>T
  hgvsp: ENSP00000410042.2:p.Arg668Cys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.2002C>T
  hgvsp: ENSP00000385858.1:p.Arg668Cys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.2002C>T
  hgvsp: ENSP00000216267.8:p.Arg668Cys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1066C>T
  hgvsp: ENSP00000437514.1:p.Arg356Cys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.787C>T
  hgvsp: ENSP00000345886.5:p.Arg263Cys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.2002C>T
  hgvsp: ENSP00000384076.1:p.Arg668Cys
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16526
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6027
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34545
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40203
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1868
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg668Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff

22-50191551-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191551
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191551
    reference: chr 22
allele count: 10
allele frequency: 8.271709100534352e-5
allele num: 120894
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.2000G>A
  hgvsp: ENSP00000384076.1:p.Arg667Gln
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.785G>A
  hgvsp: ENSP00000345886.5:p.Arg262Gln
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.2000G>A
  hgvsp: ENSP00000385858.1:p.Arg667Gln
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1064G>A
  hgvsp: ENSP00000437514.1:p.Arg355Gln
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.2000G>A
  hgvsp: ENSP00000410042.2:p.Arg667Gln
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.896G>A
  hgvsp: ENSP00000388027.1:p.Arg299Gln
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.2000G>A
  hgvsp: ENSP00000216267.8:p.Arg667Gln
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16603
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6042
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 34593
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2781
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8348
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg667Gln
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum

22-50191552-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191552
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191552
    reference: chr 22
allele count: 2
allele frequency: 1.65371258475277e-5
allele num: 120940
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1999C>T
  hgvsp: ENSP00000385858.1:p.Arg667Trp
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1999C>T
  hgvsp: ENSP00000384076.1:p.Arg667Trp
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.895C>T
  hgvsp: ENSP00000388027.1:p.Arg299Trp
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1999C>T
  hgvsp: ENSP00000410042.2:p.Arg667Trp
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1999C>T
  hgvsp: ENSP00000216267.8:p.Arg667Trp
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1063C>T
  hgvsp: ENSP00000437514.1:p.Arg355Trp
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.784C>T
  hgvsp: ENSP00000345886.5:p.Arg262Trp
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16634
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6078
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34597
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40630
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1889
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg667Trp
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

22-50191556-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191556
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191556
    reference: chr 22
allele count: 1
allele frequency: 8.260503229856763e-6
allele num: 121058
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1995G>C
  hgvsp: ENSP00000384076.1:p.Gln665His
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1059G>C
  hgvsp: ENSP00000437514.1:p.Gln353His
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.780G>C
  hgvsp: ENSP00000345886.5:p.Gln260His
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1995G>C
  hgvsp: ENSP00000410042.2:p.Gln665His
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.891G>C
  hgvsp: ENSP00000388027.1:p.Gln297His
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1995G>C
  hgvsp: ENSP00000216267.8:p.Gln665His
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1995G>C
  hgvsp: ENSP00000385858.1:p.Gln665His
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34653
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40808
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln665His
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

22-50191577-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191577
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191577
    reference: chr 22
allele count: 1
allele frequency: 8.247694769311978e-6
allele num: 121246
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1974G>A
  hgvsp: ENST00000457780.2:c.1974G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1974G>A
  hgvsp: ENST00000404034.1:c.1974G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.870G>A
  hgvsp: ENST00000438393.1:c.870G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.759G>A
  hgvsp: ENST00000342989.5:c.759G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1974G>A
  hgvsp: ENST00000216267.8:c.1974G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1974G>A
  hgvsp: ENST00000404760.1:c.1974G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1038G>A
  hgvsp: ENST00000542442.1:c.1038G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 16964
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34528
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6262
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2876
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1249
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln658Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

22-50191583-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191583
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191583
    reference: chr 22
allele count: 12
allele frequency: 9.892175289346128e-5
allele num: 121308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1968C>T
  hgvsp: ENST00000404034.1:c.1968C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1032C>T
  hgvsp: ENST00000542442.1:c.1032C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.753C>T
  hgvsp: ENST00000342989.5:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1968C>T
  hgvsp: ENST00000404760.1:c.1968C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1968C>T
  hgvsp: ENST00000457780.2:c.1968C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.864C>T
  hgvsp: ENST00000438393.1:c.864C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1968C>T
  hgvsp: ENST00000216267.8:c.1968C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17006
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3264
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40988
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8540
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1265
  bin: 9.75e1
  variant carriers: 12
hgvs: p.Arg656Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

22-50191585-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191585
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191585
    reference: chr 22
allele count: 3
allele frequency: 2.473288484368817e-5
allele num: 121296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1966C>T
  hgvsp: ENSP00000410042.2:p.Arg656Cys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.862C>T
  hgvsp: ENSP00000388027.1:p.Arg288Cys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1966C>T
  hgvsp: ENSP00000385858.1:p.Arg656Cys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1966C>T
  hgvsp: ENSP00000384076.1:p.Arg656Cys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1030C>T
  hgvsp: ENSP00000437514.1:p.Arg344Cys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1966C>T
  hgvsp: ENSP00000216267.8:p.Arg656Cys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.751C>T
  hgvsp: ENSP00000345886.5:p.Arg251Cys
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34439
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17029
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8532
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40961
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1934
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg656Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

22-50191588-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191588
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191588
    reference: chr 22
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1963C>T
  hgvsp: ENST00000457780.2:c.1963C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.748C>T
  hgvsp: ENST00000342989.5:c.748C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1963C>T
  hgvsp: ENST00000404034.1:c.1963C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.859C>T
  hgvsp: ENST00000438393.1:c.859C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1963C>T
  hgvsp: ENST00000404760.1:c.1963C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1963C>T
  hgvsp: ENST00000216267.8:c.1963C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1027C>T
  hgvsp: ENST00000542442.1:c.1027C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6342
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17063
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1940
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41015
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu655Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

22-50191588-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191588
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191588
    reference: chr 22
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1963C>G
  hgvsp: ENSP00000384076.1:p.Leu655Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1027C>G
  hgvsp: ENSP00000437514.1:p.Leu343Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1963C>G
  hgvsp: ENSP00000385858.1:p.Leu655Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1963C>G
  hgvsp: ENSP00000216267.8:p.Leu655Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1963C>G
  hgvsp: ENSP00000410042.2:p.Leu655Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.859C>G
  hgvsp: ENSP00000388027.1:p.Leu287Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.748C>G
  hgvsp: ENSP00000345886.5:p.Leu250Val
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6342
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17063
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2890
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41015
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu655Val
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

22-50191590-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191590
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191590
    reference: chr 22
allele count: 2
allele frequency: 1.648098094798602e-5
allele num: 121352
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1025G>A
  hgvsp: ENSP00000437514.1:p.Arg342Lys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1961G>A
  hgvsp: ENSP00000216267.8:p.Arg654Lys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1961G>A
  hgvsp: ENSP00000385858.1:p.Arg654Lys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1961G>A
  hgvsp: ENSP00000410042.2:p.Arg654Lys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.746G>A
  hgvsp: ENSP00000345886.5:p.Arg249Lys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.857G>A
  hgvsp: ENSP00000388027.1:p.Arg286Lys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1961G>A
  hgvsp: ENSP00000384076.1:p.Arg654Lys
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34439
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17088
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40996
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8553
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg654Lys
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

22-50191595-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191595
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191595
    reference: chr 22
allele count: 13
allele frequency: 1.071193144363876e-4
allele num: 121360
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1956G>A
  hgvsp: ENST00000457780.2:c.1956G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1956G>A
  hgvsp: ENST00000216267.8:c.1956G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1956G>A
  hgvsp: ENST00000404034.1:c.1956G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.741G>A
  hgvsp: ENST00000342989.5:c.741G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.852G>A
  hgvsp: ENST00000438393.1:c.852G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1956G>A
  hgvsp: ENST00000404760.1:c.1956G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1020G>A
  hgvsp: ENST00000542442.1:c.1020G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17122
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 34405
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41052
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala652Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

22-50191598-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191598
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191598
    reference: chr 22
allele count: 15
allele frequency: 1.235971720967024e-4
allele num: 121362
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.738C>T
  hgvsp: ENST00000342989.5:c.738C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.849C>T
  hgvsp: ENST00000438393.1:c.849C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1953C>T
  hgvsp: ENST00000404034.1:c.1953C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1953C>T
  hgvsp: ENST00000457780.2:c.1953C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1017C>T
  hgvsp: ENST00000542442.1:c.1017C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1953C>T
  hgvsp: ENST00000404760.1:c.1953C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1953C>T
  hgvsp: ENST00000216267.8:c.1953C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 17158
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1278
  bin: 9.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala651Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum

22-50191600-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191600
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191600
    reference: chr 22
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1951G>A
  hgvsp: ENSP00000385858.1:p.Ala651Thr
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.736G>A
  hgvsp: ENSP00000345886.5:p.Ala246Thr
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1951G>A
  hgvsp: ENSP00000216267.8:p.Ala651Thr
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.847G>A
  hgvsp: ENSP00000388027.1:p.Ala283Thr
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1951G>A
  hgvsp: ENSP00000410042.2:p.Ala651Thr
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1951G>A
  hgvsp: ENSP00000384076.1:p.Ala651Thr
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1015G>A
  hgvsp: ENSP00000437514.1:p.Ala339Thr
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6374
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34369
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3289
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2906
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41119
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala651Thr
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

22-50191612-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191612
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191612
    reference: chr 22
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1939G>A
  hgvsp: ENSP00000410042.2:p.Val647Met
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1939G>A
  hgvsp: ENSP00000384076.1:p.Val647Met
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.835G>A
  hgvsp: ENSP00000388027.1:p.Val279Met
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.724G>A
  hgvsp: ENSP00000345886.5:p.Val242Met
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1939G>A
  hgvsp: ENSP00000385858.1:p.Val647Met
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1939G>A
  hgvsp: ENSP00000216267.8:p.Val647Met
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.1003G>A
  hgvsp: ENSP00000437514.1:p.Val335Met
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6399
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17189
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8560
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val647Met
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

22-50191616-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191616
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191616
    reference: chr 22
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1935C>T
  hgvsp: ENST00000216267.8:c.1935C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1935C>T
  hgvsp: ENST00000457780.2:c.1935C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1935C>T
  hgvsp: ENST00000404034.1:c.1935C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1935C>T
  hgvsp: ENST00000404760.1:c.1935C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.831C>T
  hgvsp: ENST00000438393.1:c.831C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.999C>T
  hgvsp: ENST00000542442.1:c.999C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.720C>T
  hgvsp: ENST00000342989.5:c.720C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6403
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34350
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asp645Asp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

22-50191625-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191625
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191625
    reference: chr 22
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1926T>C
  hgvsp: ENST00000457780.2:c.1926T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.822T>C
  hgvsp: ENST00000438393.1:c.822T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.711T>C
  hgvsp: ENST00000342989.5:c.711T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1926T>C
  hgvsp: ENST00000216267.8:c.1926T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1926T>C
  hgvsp: ENST00000404760.1:c.1926T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.990T>C
  hgvsp: ENST00000542442.1:c.990T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1926T>C
  hgvsp: ENST00000404034.1:c.1926T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6412
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34317
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41152
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1273
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1959
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asn642Asn
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

22-50191631-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191631
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191631
    reference: chr 22
allele count: 2
allele frequency: 1.647582173160887e-5
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.984G>A
  hgvsp: ENST00000542442.1:c.984G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1920G>A
  hgvsp: ENST00000404760.1:c.1920G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1920G>A
  hgvsp: ENST00000216267.8:c.1920G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1920G>A
  hgvsp: ENST00000457780.2:c.1920G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.705G>A
  hgvsp: ENST00000342989.5:c.705G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.816G>A
  hgvsp: ENST00000438393.1:c.816G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1920G>A
  hgvsp: ENST00000404034.1:c.1920G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Lys640Lys
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

22-50191632-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191632
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191632
    reference: chr 22
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.983A>G
  hgvsp: ENSP00000437514.1:p.Lys328Arg
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.704A>G
  hgvsp: ENSP00000345886.5:p.Lys235Arg
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1919A>G
  hgvsp: ENSP00000385858.1:p.Lys640Arg
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1919A>G
  hgvsp: ENSP00000216267.8:p.Lys640Arg
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1919A>G
  hgvsp: ENSP00000410042.2:p.Lys640Arg
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1919A>G
  hgvsp: ENSP00000384076.1:p.Lys640Arg
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.815A>G
  hgvsp: ENSP00000388027.1:p.Lys272Arg
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6415
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34313
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2904
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3284
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8570
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1958
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys640Arg
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

22-50191636-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191636
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191636
    reference: chr 22
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1915A>G
  hgvsp: ENSP00000410042.2:p.Met639Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.979A>G
  hgvsp: ENSP00000437514.1:p.Met327Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1915A>G
  hgvsp: ENSP00000385858.1:p.Met639Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1915A>G
  hgvsp: ENSP00000384076.1:p.Met639Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1915A>G
  hgvsp: ENSP00000216267.8:p.Met639Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.700A>G
  hgvsp: ENSP00000345886.5:p.Met234Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.811A>G
  hgvsp: ENSP00000388027.1:p.Met271Val
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6414
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2902
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Met639Val
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

22-50191656-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191656
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191656
    reference: chr 22
allele count: 3
allele frequency: 2.471251112063001e-5
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.959A>G
  hgvsp: ENSP00000437514.1:p.Asp320Gly
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.680A>G
  hgvsp: ENSP00000345886.5:p.Asp227Gly
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1895A>G
  hgvsp: ENSP00000384076.1:p.Asp632Gly
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1895A>G
  hgvsp: ENSP00000410042.2:p.Asp632Gly
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.791A>G
  hgvsp: ENSP00000388027.1:p.Asp264Gly
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1895A>G
  hgvsp: ENSP00000216267.8:p.Asp632Gly
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1895A>G
  hgvsp: ENSP00000385858.1:p.Asp632Gly
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6423
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41204
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2906
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3282
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asp632Gly
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ

22-50191657-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191657
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191657
    reference: chr 22
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.958G>A
  hgvsp: ENSP00000437514.1:p.Asp320Asn
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1894G>A
  hgvsp: ENSP00000216267.8:p.Asp632Asn
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1894G>A
  hgvsp: ENSP00000410042.2:p.Asp632Asn
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.679G>A
  hgvsp: ENSP00000345886.5:p.Asp227Asn
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.790G>A
  hgvsp: ENSP00000388027.1:p.Asp264Asn
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1894G>A
  hgvsp: ENSP00000384076.1:p.Asp632Asn
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1894G>A
  hgvsp: ENSP00000385858.1:p.Asp632Asn
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6427
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17270
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41204
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1277
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Asp632Asn
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP

22-50191675-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191675
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191675
    reference: chr 22
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1876G>A
  hgvsp: ENSP00000384076.1:p.Glu626Lys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1876G>A
  hgvsp: ENSP00000216267.8:p.Glu626Lys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1876G>A
  hgvsp: ENSP00000385858.1:p.Glu626Lys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.772G>A
  hgvsp: ENSP00000388027.1:p.Glu258Lys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.661G>A
  hgvsp: ENSP00000345886.5:p.Glu221Lys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.940G>A
  hgvsp: ENSP00000437514.1:p.Glu314Lys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1876G>A
  hgvsp: ENSP00000410042.2:p.Glu626Lys
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2903
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu626Lys
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP

22-50191676-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191676
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191676
    reference: chr 22
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.939T>C
  hgvsp: ENST00000542442.1:c.939T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1875T>C
  hgvsp: ENST00000404034.1:c.1875T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.771T>C
  hgvsp: ENST00000438393.1:c.771T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1875T>C
  hgvsp: ENST00000457780.2:c.1875T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.660T>C
  hgvsp: ENST00000342989.5:c.660T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1875T>C
  hgvsp: ENST00000216267.8:c.1875T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1875T>C
  hgvsp: ENST00000404760.1:c.1875T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1965
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2903
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His625His
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff

22-50191677-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191677
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191677
    reference: chr 22
allele count: 2
allele frequency: 1.647419317638919e-5
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1874A>G
  hgvsp: ENSP00000384076.1:p.His625Arg
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1874A>G
  hgvsp: ENSP00000216267.8:p.His625Arg
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.770A>G
  hgvsp: ENSP00000388027.1:p.His257Arg
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1874A>G
  hgvsp: ENSP00000385858.1:p.His625Arg
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.659A>G
  hgvsp: ENSP00000345886.5:p.His220Arg
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1874A>G
  hgvsp: ENSP00000410042.2:p.His625Arg
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.938A>G
  hgvsp: ENSP00000437514.1:p.His313Arg
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1965
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3280
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2904
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
hgvs: p.His625Arg
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

22-50191691-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191691
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191691
    reference: chr 22
allele count: 20
allele frequency: 1.647555028337946e-4
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.645G>A
  hgvsp: ENST00000342989.5:c.645G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.756G>A
  hgvsp: ENST00000438393.1:c.756G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.924G>A
  hgvsp: ENST00000542442.1:c.924G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1860G>A
  hgvsp: ENST00000404034.1:c.1860G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1860G>A
  hgvsp: ENST00000216267.8:c.1860G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1860G>A
  hgvsp: ENST00000457780.2:c.1860G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1860G>A
  hgvsp: ENST00000404760.1:c.1860G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34226
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1965
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3280
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly620Gly
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

22-50191693-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191693
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191693
    reference: chr 22
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1858G>C
  hgvsp: ENSP00000410042.2:p.Gly620Arg
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1858G>C
  hgvsp: ENSP00000216267.8:p.Gly620Arg
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1858G>C
  hgvsp: ENSP00000385858.1:p.Gly620Arg
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.922G>C
  hgvsp: ENSP00000437514.1:p.Gly308Arg
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.754G>C
  hgvsp: ENSP00000388027.1:p.Gly252Arg
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1858G>C
  hgvsp: ENSP00000384076.1:p.Gly620Arg
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.643G>C
  hgvsp: ENSP00000345886.5:p.Gly215Arg
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34225
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6427
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41191
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly620Arg
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

22-50191694-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191694
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191694
    reference: chr 22
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.921A>G
  hgvsp: ENST00000542442.1:c.921A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1857A>G
  hgvsp: ENST00000216267.8:c.1857A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.642A>G
  hgvsp: ENST00000342989.5:c.642A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1857A>G
  hgvsp: ENST00000457780.2:c.1857A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.753A>G
  hgvsp: ENST00000438393.1:c.753A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1857A>G
  hgvsp: ENST00000404034.1:c.1857A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1857A>G
  hgvsp: ENST00000404760.1:c.1857A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6428
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17297
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34224
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1548
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41196
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gln619Gln
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

22-50191698-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191698
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191698
    reference: chr 22
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1853C>G
  hgvsp: ENSP00000384076.1:p.Ala618Gly
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.749C>G
  hgvsp: ENSP00000388027.1:p.Ala250Gly
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1853C>G
  hgvsp: ENSP00000216267.8:p.Ala618Gly
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1853C>G
  hgvsp: ENSP00000410042.2:p.Ala618Gly
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.638C>G
  hgvsp: ENSP00000345886.5:p.Ala213Gly
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.917C>G
  hgvsp: ENSP00000437514.1:p.Ala306Gly
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1853C>G
  hgvsp: ENSP00000385858.1:p.Ala618Gly
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6423
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41154
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8566
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3282
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala618Gly
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

22-50191702-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191702
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191702
    reference: chr 22
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.634G>A
  hgvsp: ENSP00000345886.5:p.Glu212Lys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1849G>A
  hgvsp: ENSP00000410042.2:p.Glu617Lys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1849G>A
  hgvsp: ENSP00000385858.1:p.Glu617Lys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.745G>A
  hgvsp: ENSP00000388027.1:p.Glu249Lys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1849G>A
  hgvsp: ENSP00000384076.1:p.Glu617Lys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1849G>A
  hgvsp: ENSP00000216267.8:p.Glu617Lys
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.913G>A
  hgvsp: ENSP00000437514.1:p.Glu305Lys
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu617Lys
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

22-50191711-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191711
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191711
    reference: chr 22
allele count: 1
allele frequency: 8.245110649384915e-6
allele num: 121284
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1840A>T
  hgvsp: ENSP00000410042.2:p.Lys614Ter
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1840A>T
  hgvsp: ENSP00000384076.1:p.Lys614Ter
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.736A>T
  hgvsp: ENSP00000388027.1:p.Lys246Ter
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1840A>T
  hgvsp: ENSP00000385858.1:p.Lys614Ter
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.625A>T
  hgvsp: ENSP00000345886.5:p.Lys209Ter
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.904A>T
  hgvsp: ENSP00000437514.1:p.Lys302Ter
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1840A>T
  hgvsp: ENSP00000216267.8:p.Lys614Ter
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6413
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17275
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1961
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3282
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2899
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41101
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Lys614Ter
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

22-50191726-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191726
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191726
    reference: chr 22
allele count: 1
allele frequency: 8.267195767195768e-6
allele num: 120960
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.721T>C
  hgvsp: ENSP00000388027.1:p.Phe241Leu
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1825T>C
  hgvsp: ENSP00000385858.1:p.Phe609Leu
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1825T>C
  hgvsp: ENSP00000410042.2:p.Phe609Leu
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.889T>C
  hgvsp: ENSP00000437514.1:p.Phe297Leu
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.610T>C
  hgvsp: ENSP00000345886.5:p.Phe204Leu
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1825T>C
  hgvsp: ENSP00000384076.1:p.Phe609Leu
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1825T>C
  hgvsp: ENSP00000216267.8:p.Phe609Leu
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33898
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2893
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Phe609Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

22-50191729-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191729
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191729
    reference: chr 22
allele count: 1
allele frequency: 8.272393368849475e-6
allele num: 120884
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1822G>A
  hgvsp: ENSP00000384076.1:p.Asp608Asn
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1822G>A
  hgvsp: ENSP00000385858.1:p.Asp608Asn
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1822G>A
  hgvsp: ENSP00000216267.8:p.Asp608Asn
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.607G>A
  hgvsp: ENSP00000345886.5:p.Asp203Asn
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1822G>A
  hgvsp: ENSP00000410042.2:p.Asp608Asn
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.886G>A
  hgvsp: ENSP00000437514.1:p.Asp296Asn
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.718G>A
  hgvsp: ENSP00000388027.1:p.Asp240Asn
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6404
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33826
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17194
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8483
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1962
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp608Asn
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

22-50191732-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191732
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191732
    reference: chr 22
allele count: 2
allele frequency: 1.656012983141788e-5
allele num: 120772
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.883A>G
  hgvsp: ENSP00000437514.1:p.Met295Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1819A>G
  hgvsp: ENSP00000385858.1:p.Met607Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.715A>G
  hgvsp: ENSP00000388027.1:p.Met239Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1819A>G
  hgvsp: ENSP00000410042.2:p.Met607Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1819A>G
  hgvsp: ENSP00000216267.8:p.Met607Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.604A>G
  hgvsp: ENSP00000345886.5:p.Met202Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1819A>G
  hgvsp: ENSP00000384076.1:p.Met607Val
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33717
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6394
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1959
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1280
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8475
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Met607Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

22-50191739-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191739
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191739
    reference: chr 22
allele count: 1
allele frequency: 8.310203267571925e-6
allele num: 120334
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1812A>G
  hgvsp: ENST00000404760.1:c.1812A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.876A>G
  hgvsp: ENST00000542442.1:c.876A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1812A>G
  hgvsp: ENST00000457780.2:c.1812A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1812A>G
  hgvsp: ENST00000404034.1:c.1812A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.708A>G
  hgvsp: ENST00000438393.1:c.708A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1812A>G
  hgvsp: ENST00000216267.8:c.1812A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.597A>G
  hgvsp: ENST00000342989.5:c.597A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6363
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16998
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3269
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39992
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Lys604Lys
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP

22-50191744-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191744
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191744
    reference: chr 22
allele count: 3
allele frequency: 2.498001598721023e-5
allele num: 120096
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.703A>G
  hgvsp: ENSP00000388027.1:p.Ile235Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1807A>G
  hgvsp: ENSP00000216267.8:p.Ile603Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.592A>G
  hgvsp: ENSP00000345886.5:p.Ile198Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.871A>G
  hgvsp: ENSP00000437514.1:p.Ile291Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1807A>G
  hgvsp: ENSP00000385858.1:p.Ile603Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1807A>G
  hgvsp: ENSP00000410042.2:p.Ile603Val
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1807A>G
  hgvsp: ENSP00000384076.1:p.Ile603Val
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6344
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16918
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1960
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ile603Val
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

22-50191753-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191753
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191753
    reference: chr 22
allele count: 1
allele frequency: 8.387854386847844e-6
allele num: 119220
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1798T>A
  hgvsp: ENSP00000385858.1:p.Leu600Met
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.694T>A
  hgvsp: ENSP00000388027.1:p.Leu232Met
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.862T>A
  hgvsp: ENSP00000437514.1:p.Leu288Met
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1798T>A
  hgvsp: ENSP00000384076.1:p.Leu600Met
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1798T>A
  hgvsp: ENSP00000410042.2:p.Leu600Met
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.583T>A
  hgvsp: ENSP00000345886.5:p.Leu195Met
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1798T>A
  hgvsp: ENSP00000216267.8:p.Leu600Met
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16663
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu600Met
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

22-50191777-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191777
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191777
    reference: chr 22
allele count: 1
allele frequency: 8.611484275429714e-6
allele num: 116124
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1786-12C>T
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.850-12C>T
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.682-12C>T
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.571-12C>T
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1786-12C>T
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1786-12C>T
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1786-12C>T
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15784
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30433
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4143
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2822
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36103
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3247
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

22-50191778-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191778
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191778
    reference: chr 22
allele count: 1
allele frequency: 8.618757864616552e-6
allele num: 116026
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1786-13T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.682-13T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1786-13T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.571-13T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1786-13T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1786-13T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.850-13T>C
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6212
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2822
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3247
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1949
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36063
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

22-50191789-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191789
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191789
    reference: chr 22
allele count: 3
allele frequency: 2.61565557047448e-5
allele num: 114694
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1786-24A>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.850-24A>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1786-24A>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1786-24A>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.571-24A>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.682-24A>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1786-24A>C
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2866
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1016
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8125
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4057
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2814
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD

22-50191796-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191796
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191796
    reference: chr 22
allele count: 1
allele frequency: 8.828462964597864e-6
allele num: 113270
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1786-31G>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.850-31G>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1786-31G>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.571-31G>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1786-31G>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.682-31G>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1786-31G>C
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15165
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6147
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28873
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33888
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3529
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1545
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2790
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7982
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

22-50191800-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191800
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191800
    reference: chr 22
allele count: 3
allele frequency: 2.656512884087488e-5
allele num: 112930
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1786-35G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.571-35G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.850-35G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1786-35G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1786-35G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1786-35G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.682-35G>A
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2671
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28651
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15032
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2690
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6086
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2786
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3388
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7967
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33541
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD

22-50191806-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191806
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191806
    reference: chr 22
allele count: 1
allele frequency: 8.922835320151331e-6
allele num: 112072
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1786-41G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.571-41G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1786-41G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1786-41G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1786-41G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.682-41G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.850-41G>A
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14543
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2833
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3211
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1901
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7806
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum

22-50191809-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191809
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191809
    reference: chr 22
allele count: 1
allele frequency: 8.972311446874944e-6
allele num: 111454
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1786-44C>T
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.682-44C>T
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.571-44C>T
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.850-44C>T
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1786-44C>T
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1786-44C>T
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1786-44C>T
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2722
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14188
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5980
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1664
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1928
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1264
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 891
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3203
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2728
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

22-50191810-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50191810
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50191810
    reference: chr 22
allele count: 27
allele frequency: 2.421915645575071e-4
allele num: 111482
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.850-45T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1786-45T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1786-45T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.682-45T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1786-45T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1786-45T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.571-45T>C
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5950
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28129
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 14230
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2707
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2299
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7505
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1927
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1659
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28855
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/22-50192159-CCA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50192159
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50192157
    reference: chr 22
allele count: 3
allele frequency: 2.473043822336532e-5
allele num: 121308
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.570+45_570+46delTG
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1785+45_1785+46delTG
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1785+45_1785+46delTG
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.849+60_849+61delTG
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1785+45_1785+46delTG
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.681+45_681+46delTG
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1785+45_1785+46delTG
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28636
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2244
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37696
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2112
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: CCA
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/22-50192161-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50192161
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50192160
    reference: chr 22
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1785+44delG
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.681+44delG
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1785+44delG
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1785+44delG
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.849+59delG
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.570+44delG
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1785+44delG
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12384
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2106
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: AC
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD

22-50192163-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50192163
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50192163
    reference: chr 22
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.849+58T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1785+43T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1785+43T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1785+43T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.681+43T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.570+43T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1785+43T>C
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12376
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28646
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9441
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2310
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2107
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD

22-50192164-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50192164
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50192164
    reference: chr 22
allele count: 2
allele frequency: 1.648641519388024e-5
allele num: 121312
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1785+42C>G
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.570+42C>G
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.681+42C>G
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1785+42C>G
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1785+42C>G
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1785+42C>G
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.849+57C>G
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28635
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12377
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1557
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37801
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff

22-50192167-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50192167
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50192167
    reference: chr 22
allele count: 2
allele frequency: 1.648587160803192e-5
allele num: 121316
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1785+39T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1785+39T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1785+39T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.849+54T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.681+39T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1785+39T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.570+39T>C
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28654
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12371
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9300
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 817
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6978
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 37827
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

22-50192168-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50192168
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50192168
    reference: chr 22
allele count: 2
allele frequency: 1.648750247312537e-5
allele num: 121304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1785+38G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.570+38G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.849+53G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1785+38G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.681+38G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1785+38G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1785+38G>A
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28647
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9472
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37760
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9285
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6974
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/22-50192169-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50192169
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50192169
    reference: chr 22
allele count: 2
allele frequency: 1.648750247312537e-5
allele num: 121304
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.570+37T>G
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.849+52T>G
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.681+37T>G
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1785+37T>G
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1785+37T>G
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1785+37T>G
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1785+37T>G
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12376
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28662
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9478
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6971
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9290
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37849
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2098
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: A
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum

22-50192171-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50192171
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50192171
    reference: chr 22
allele count: 13
allele frequency: 1.071740671734076e-4
allele num: 121298
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.570+35T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1785+35T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.681+35T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.849+50T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1785+35T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1785+35T>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1785+35T>C
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12380
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2231
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28660
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37722
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2083
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

22-50192172-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50192172
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50192172
    reference: chr 22
allele count: 2
allele frequency: 1.648858989579211e-5
allele num: 121296
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1785+34A>G
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1785+34A>G
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1785+34A>G
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.849+49A>G
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1785+34A>G
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.681+34A>G
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.570+34A>G
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6960
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37765
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

22-50192174-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50192174
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50192174
    reference: chr 22
allele count: 7791
allele frequency: 6.423871638000693e-2
allele num: 121282
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.681+32G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1785+32G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.570+32G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.849+47G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1785+32G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1785+32G>A
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1785+32G>A
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 4.25e1
  variant carriers: 254
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 3.75e1
  variant carriers: 181
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 4.75e1
  variant carriers: 313
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.25e1
  variant carriers: 335
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 504
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.25e1
  variant carriers: 549
genotype depth: GenotypeDepth
  all individuals: 28625
  bin: 2.75e1
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 12344
  bin: 3.25e1
  variant carriers: 152
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 5.25e1
  variant carriers: 422
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 6.75e1
  variant carriers: 515
genotype depth: GenotypeDepth
  all individuals: 9444
  bin: 2.25e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 7.75e1
  variant carriers: 501
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.75e1
  variant carriers: 467
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 8.75e1
  variant carriers: 398
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 8.25e1
  variant carriers: 444
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 9.75e1
  variant carriers: 1952
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 8.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37650
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1994
  bin: 7.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 9175
  bin: 6.75e1
  variant carriers: 3
num of homozygotes: 564
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum

22-50192186-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50192186
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 50192186
    reference: chr 22
allele count: 1
allele frequency: 8.245790523937529e-6
allele num: 121274
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000388027
  ensembl transcript: ENST00000438393
  gene symbol: BRD1
  hgvsc: ENST00000438393.1:c.681+20G>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000345886
  ensembl transcript: ENST00000342989
  gene symbol: BRD1
  hgvsc: ENST00000342989.5:c.570+20G>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000216267
  ensembl transcript: ENST00000216267
  gene symbol: BRD1
  hgvsc: ENST00000216267.8:c.1785+20G>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000385858
  ensembl transcript: ENST00000404760
  gene symbol: BRD1
  hgvsc: ENST00000404760.1:c.1785+20G>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000410042
  ensembl transcript: ENST00000457780
  gene symbol: BRD1
  hgvsc: ENST00000457780.2:c.1785+20G>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000384076
  ensembl transcript: ENST00000404034
  gene symbol: BRD1
  hgvsc: ENST00000404034.1:c.1785+20G>C
  variant of: http://identifiers.org/hgnc/1102
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100425
  ensembl protein: ENSP00000437514
  ensembl transcript: ENST00000542442
  gene symbol: BRD1
  hgvsc: ENST00000542442.1:c.849+35G>C
  variant of: http://identifiers.org/hgnc/1102
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 7153
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5543
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2349
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2718
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.627551186484815e-5
allele num: 61442
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12742
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5912
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.889e1

FS
type: SiteQuality
SIO_000300: 1.808e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

VQSLOD
type: SiteQuality
SIO_000300: 7.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.346487e6

MQRankSum
type: SiteQuality
SIO_000300: 3.17e-1

QD
type: SiteQuality
SIO_000300: 1.188e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.46e-1

GenotypeQuality
all individuals: 362
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 597
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4765
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7185
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1613
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5946
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8364
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8712
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.618699213312182e-5
allele num: 61778
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.26e0

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-2

DP
type: SiteQuality
SIO_000300: 1.359782e6

QD
type: SiteQuality
SIO_000300: 1.066e1

FS
type: SiteQuality
SIO_000300: 4.38e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.51e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-2

GenotypeQuality
all individuals: 749
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2746
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4641
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35810
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2379
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1612
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 9.75e1
variant carriers: 4

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8780
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11324
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.347840642785404e-4
allele num: 5974
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13778
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.225494307002548e-5
allele num: 62006
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

DP
type: SiteQuality
SIO_000300: 1.364568e6

MQRankSum
type: SiteQuality
SIO_000300: -1.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.69e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.15e-1

QD
type: SiteQuality
SIO_000300: 1.293e1

GenotypeQuality
all individuals: 397
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4181
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37024
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 599
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 787
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1617
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2388
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.192463629859289e-4
allele num: 8386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11336
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8952
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.79463001438389e-5
allele num: 62570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6050
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14538
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

QD
type: SiteQuality
SIO_000300: 1.015e1

DP
type: SiteQuality
SIO_000300: 1.379941e6

FS
type: SiteQuality
SIO_000300: 1.387e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.486e0

MQRankSum
type: SiteQuality
SIO_000300: 7.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.33e-1

GenotypeQuality
all individuals: 696
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1619
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37530
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2410
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 7.5e0
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.381519409383186e-4
allele num: 8398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6078
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9104
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11346
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14814
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.589521871820956e-5
allele num: 62912
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.796e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.59e-1

QD
type: SiteQuality
SIO_000300: 8.460000000000001e0

FS
type: SiteQuality
SIO_000300: 9.614000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.07e-1

MQ
type: SiteQuality
SIO_000300: 5.93e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.48e-1

DP
type: SiteQuality
SIO_000300: 1.386519e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
all individuals: 37423
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3605
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 876
bin: 9.75e1
variant carriers: 95

GenotypeQuality
all individuals: 7350
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.642240620045799e-4
allele num: 11354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6100
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.912143557932715e-5
allele num: 63194
num of homozygotes: 0

Other
type: Population
allele count: 6
allele frequency: 7.228915662650603e-3
allele num: 830
num of homozygotes: 1

South Asian
type: Population
allele count: 25
allele frequency: 1.633559853633037e-3
allele num: 15304
num of homozygotes: 0

East Asian
type: Population
allele count: 57
allele frequency: 6.777645659928657e-3
allele num: 8410
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.32e-1

FS
type: SiteQuality
SIO_000300: 1.118e0

QD
type: SiteQuality
SIO_000300: 1.171e1

VQSLOD
type: SiteQuality
SIO_000300: 3.84e0

DP
type: SiteQuality
SIO_000300: 1.400516e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

GenotypeQuality
all individuals: 164
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3481
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7426
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2430
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2773
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8424
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6118
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.577237311125832e-5
allele num: 63402
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.238e0

FS
type: SiteQuality
SIO_000300: 2.963e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.34e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.403868e6

QD
type: SiteQuality
SIO_000300: 2.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.78e-1

GenotypeQuality
all individuals: 1642
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7489
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2438
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38494
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6162
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.565680288085173e-5
allele num: 63870
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.007e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.53e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

VQSLOD
type: SiteQuality
SIO_000300: -2.482e-1

QD
type: SiteQuality
SIO_000300: 1.329e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.42e0

DP
type: SiteQuality
SIO_000300: 1.416046e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.47e-1

GenotypeQuality
all individuals: 817
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 149
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1638
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2921
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38467
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9482
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15966
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.689991558015196e-5
allele num: 63966
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.184834123222749e-4
allele num: 8440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6154
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.35e0

MQRankSum
type: SiteQuality
SIO_000300: 6.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-2

DP
type: SiteQuality
SIO_000300: 1.419515e6

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 4.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.28e1

GenotypeQuality
all individuals: 515
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7598
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1641
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2467
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2590
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39368
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16216
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.180080245456691e-4
allele num: 8474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6196
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.402e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.6e0

DP
type: SiteQuality
SIO_000300: 1.43e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-2

GenotypeQuality
all individuals: 835
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 488
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2865
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39508
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2527
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7742
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.534354190321294e-5
allele num: 65174
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6314
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9862
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.978e1

FS
type: SiteQuality
SIO_000300: 4.58e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

DP
type: SiteQuality
SIO_000300: 1.448904e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.08e0

QD
type: SiteQuality
SIO_000300: 1.017e1

GenotypeQuality
all individuals: 2548
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39795
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1680
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2883
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 835
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 629
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.171234481143125e-4
allele num: 8538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6334
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9940
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531299767242435e-5
allele num: 65304
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e-1

DP
type: SiteQuality
SIO_000300: 1.452571e6

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

MQ
type: SiteQuality
SIO_000300: 5.921e1

FS
type: SiteQuality
SIO_000300: 6.869e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.175e0

VQSLOD
type: SiteQuality
SIO_000300: 1.05e-1

QD
type: SiteQuality
SIO_000300: 1.12e1

GenotypeQuality
all individuals: 2602
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1476
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39565
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 410
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7908
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65624
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.169043722235212e-4
allele num: 8554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10046
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

FS
type: SiteQuality
SIO_000300: 2.146e0

VQSLOD
type: SiteQuality
SIO_000300: 1.66e-1

MQ
type: SiteQuality
SIO_000300: 5.876e1

QD
type: SiteQuality
SIO_000300: 1.2e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.081e0

MQRankSum
type: SiteQuality
SIO_000300: -3.54e-1

DP
type: SiteQuality
SIO_000300: 1.462264e6

GenotypeQuality
all individuals: 280
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 207
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40051
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2713
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1830
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8181
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.031864900100051e-5
allele num: 65966
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10154
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.9e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

DP
type: SiteQuality
SIO_000300: 1.494269e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.3e0

FS
type: SiteQuality
SIO_000300: 6.109e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.91e-1

QD
type: SiteQuality
SIO_000300: 1.363e1

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1221
bin: 9.75e1
variant carriers: 24

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3117
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2708
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1837
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8214
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40451
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.782821365681862e-5
allele num: 10222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 3.477892699449586e-4
allele num: 66132
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.65e0

QD
type: SiteQuality
SIO_000300: 1.386e1

MQ
type: SiteQuality
SIO_000300: 5.956e1

DP
type: SiteQuality
SIO_000300: 1.500681e6

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

FS
type: SiteQuality
SIO_000300: 5.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.88e-1

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3129
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508341126429153e-5
allele num: 66298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6482
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.966e1

DP
type: SiteQuality
SIO_000300: 1.505147e6

QD
type: SiteQuality
SIO_000300: 1.191e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.13e-1

FS
type: SiteQuality
SIO_000300: 7.79e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.799e0

GenotypeQuality
all individuals: 525
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1218
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 127
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1858
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40248
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8306
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3170
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 719
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.012774162448783e-5
allele num: 66384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10290
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.638127577007034e-4
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.36e0

QD
type: SiteQuality
SIO_000300: 1.269e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 9.97e-1

DP
type: SiteQuality
SIO_000300: 1.509196e6

MQ
type: SiteQuality
SIO_000300: 5.975e1

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2765
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8316
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 159
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3172
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505343971097396e-5
allele num: 66430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.193e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e0

FS
type: SiteQuality
SIO_000300: 1.823e0

DP
type: SiteQuality
SIO_000300: 1.511088e6

VQSLOD
type: SiteQuality
SIO_000300: -1.966e-1

QD
type: SiteQuality
SIO_000300: 1.684e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

GenotypeQuality
all individuals: 172
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3181
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40547
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1882
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1226
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.703085581214826e-5
allele num: 10306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.203116070622913e-4
allele num: 66494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.8e-2

FS
type: SiteQuality
SIO_000300: 1.763e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.04e-1

DP
type: SiteQuality
SIO_000300: 1.513594e6

QD
type: SiteQuality
SIO_000300: 2.287e1

MQ
type: SiteQuality
SIO_000300: 5.98e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.79e-1

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3194
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2785
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8365
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1225
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212415130940834e-4
allele num: 16496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

FS
type: SiteQuality
SIO_000300: 6.119e0

DP
type: SiteQuality
SIO_000300: 1.514847e6

BaseQRankSum
type: SiteQuality
SIO_000300: 8.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
type: SiteQuality
SIO_000300: 1.05e1

GenotypeQuality
all individuals: 106
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2813
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8450
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1239
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 740
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1901
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3237
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.676795045480937e-5
allele num: 10334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66594
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.517874e6

MQRankSum
type: SiteQuality
SIO_000300: 2.58e-1

QD
type: SiteQuality
SIO_000300: 2.287e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.605e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.114e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.486e0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3265
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 673
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1919
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8510
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40911
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.524275e6

VQSLOD
type: SiteQuality
SIO_000300: -3.565e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.337e0

QD
type: SiteQuality
SIO_000300: 3.227e1

MQRankSum
type: SiteQuality
SIO_000300: 3.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.75e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e0

GenotypeQuality
all individuals: 675
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2887
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1931
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 758
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 12
allele frequency: 7.270083605961468e-4
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.52e0

MQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.56e-1

QD
type: SiteQuality
SIO_000300: 1.218e1

DP
type: SiteQuality
SIO_000300: 1.526405e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 673
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1257
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 762
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2885
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3261
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998590662388677e-5
allele num: 66698
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.8e-2

DP
type: SiteQuality
SIO_000300: 1.527717e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -5.8e-2

FS
type: SiteQuality
SIO_000300: 4.125e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.21e-1

QD
type: SiteQuality
SIO_000300: 1.0e1

GenotypeQuality
all individuals: 2890
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3275
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1262
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8551
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.527854e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.186e0

FS
type: SiteQuality
SIO_000300: 1.0527e1

VQSLOD
type: SiteQuality
SIO_000300: -7.151e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-2

QD
type: SiteQuality
SIO_000300: 1.393e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.991e0

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 676
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3275
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1940
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8551
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.186e0

FS
type: SiteQuality
SIO_000300: 1.0527e1

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-2

DP
type: SiteQuality
SIO_000300: 1.527854e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.991e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.393e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -7.151e-1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2894
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3276
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1262
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1942
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.622786759045419e-5
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.09e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.64e0

QD
type: SiteQuality
SIO_000300: 1.294e1

VQSLOD
type: SiteQuality
SIO_000300: 6.35e-1

MQ
type: SiteQuality
SIO_000300: 5.937e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.054e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.39e-1

DP
type: SiteQuality
SIO_000300: 1.528166e6

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3277
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2895
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1274
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 8550
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1944
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 13
allele frequency: 7.874015748031496e-4
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

QD
type: SiteQuality
SIO_000300: 1.337e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.94e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

VQSLOD
type: SiteQuality
SIO_000300: 2.18e0

DP
type: SiteQuality
SIO_000300: 1.530203e6

GenotypeQuality
all individuals: 2900
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41098
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3284
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8552
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1950
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.498711108446736e-4
allele num: 66724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.024803387779795e-4
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21153380179307e-4
allele num: 16508
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.31e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.81e0

QD
type: SiteQuality
SIO_000300: 1.418e1

DP
type: SiteQuality
SIO_000300: 1.530065e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.78e-1

GenotypeQuality
all individuals: 1268
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8557
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1954
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.52985e6

QD
type: SiteQuality
SIO_000300: 8.109999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -4.55e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.95e-1

FS
type: SiteQuality
SIO_000300: 1.228e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.983e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41168
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1956
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2900
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1269
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3284
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.085e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

FS
type: SiteQuality
SIO_000300: 2.638e0

DP
type: SiteQuality
SIO_000300: 1.530859e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.02e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.19e-1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41176
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2900
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1271
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8565
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3284
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1961
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 4.683e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.892e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.207e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-2

DP
type: SiteQuality
SIO_000300: 1.530888e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

VQSLOD
type: SiteQuality
SIO_000300: 5.88e-1

QD
type: SiteQuality
SIO_000300: 9.859999999999999e0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3282
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8568
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2900
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.026e0

VQSLOD
type: SiteQuality
SIO_000300: 2.41e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.97e-1

QD
type: SiteQuality
SIO_000300: 1.518e1

FS
type: SiteQuality
SIO_000300: 1.223e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-2

DP
type: SiteQuality
SIO_000300: 1.531263e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 41177
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1274
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2903
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1958
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3284
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8567
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.312138728323699e-4
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.565e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.086e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

DP
type: SiteQuality
SIO_000300: 1.53153e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e0

QD
type: SiteQuality
SIO_000300: 1.065e1

FS
type: SiteQuality
SIO_000300: 8.853999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.5e-1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41178
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1273
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 769
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.985e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.015e0

QD
type: SiteQuality
SIO_000300: 1.661e1

VQSLOD
type: SiteQuality
SIO_000300: -1.083e0

FS
type: SiteQuality
SIO_000300: 1.0587e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.95e0

MQRankSum
type: SiteQuality
SIO_000300: -1.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

DP
type: SiteQuality
SIO_000300: 1.531584e6

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3284
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8569
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41184
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1959
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.531647e6

MQRankSum
type: SiteQuality
SIO_000300: 9.15e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

QD
type: SiteQuality
SIO_000300: 1.17e1

VQSLOD
type: SiteQuality
SIO_000300: 1.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

FS
type: SiteQuality
SIO_000300: 8.329000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1276
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1963
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8571
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.33e0

FS
type: SiteQuality
SIO_000300: 1.0195e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.74e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.35e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.431e-1

QD
type: SiteQuality
SIO_000300: 1.636e1

DP
type: SiteQuality
SIO_000300: 1.532206e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8570
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3281
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2905
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1964
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.384e0

MQRankSum
type: SiteQuality
SIO_000300: 9.31e-1

MQ
type: SiteQuality
SIO_000300: 5.927e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.283e0

QD
type: SiteQuality
SIO_000300: 9.869999999999999e0

DP
type: SiteQuality
SIO_000300: 1.532213e6

GenotypeQuality
all individuals: 683
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3282
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1277
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8572
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1965
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41224
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.529e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.544e0

FS
type: SiteQuality
SIO_000300: 4.972e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.07e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.8e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.356e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

DP
type: SiteQuality
SIO_000300: 1.532435e6

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8572
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1276
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3281
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41226
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.501e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.8e-2

DP
type: SiteQuality
SIO_000300: 1.532465e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.77e-1

FS
type: SiteQuality
SIO_000300: 6.548e0

VQSLOD
type: SiteQuality
SIO_000300: 6.19e-1

QD
type: SiteQuality
SIO_000300: 1.312e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8572
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41223
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1277
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.94e-1

FS
type: SiteQuality
SIO_000300: 2.567e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -6.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-1

QD
type: SiteQuality
SIO_000300: 1.347e1

DP
type: SiteQuality
SIO_000300: 1.532427e6

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2901
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1295
bin: 9.75e1
variant carriers: 20

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8565
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41189
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 2.847465755477625e-4
allele num: 66726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 1.175e1

VQSLOD
type: SiteQuality
SIO_000300: 3.35e0

FS
type: SiteQuality
SIO_000300: 1.828e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.273e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.97e-1

DP
type: SiteQuality
SIO_000300: 1.533568e6

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3281
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2902
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8566
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1279
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1965
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.68e-1

DP
type: SiteQuality
SIO_000300: 1.532363e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.386e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.15e-1

FS
type: SiteQuality
SIO_000300: 3.706e0

VQSLOD
type: SiteQuality
SIO_000300: 3.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.41e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.008e1

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8567
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2901
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3281
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1965
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.297e1

FS
type: SiteQuality
SIO_000300: 5.999e0

DP
type: SiteQuality
SIO_000300: 1.532393e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

MQRankSum
type: SiteQuality
SIO_000300: 6.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.17e0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1279
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1965
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2900
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.064281382656155e-5
allele num: 16490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.683e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-1

FS
type: SiteQuality
SIO_000300: 2.406e0

DP
type: SiteQuality
SIO_000300: 1.531927e6

VQSLOD
type: SiteQuality
SIO_000300: -3.876e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.02e-1

MQ
type: SiteQuality
SIO_000300: 5.934e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.69e-1

GenotypeQuality
all individuals: 1279
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 65
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8557
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1963
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3282
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41143
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2901
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.531943e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.211e0

FS
type: SiteQuality
SIO_000300: 4.575e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.6e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.3e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.126e1

GenotypeQuality
all individuals: 115
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8550
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1279
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.43e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.629e0

QD
type: SiteQuality
SIO_000300: 1.204e1

FS
type: SiteQuality
SIO_000300: 1.408e0

MQ
type: SiteQuality
SIO_000300: 5.913e1

VQSLOD
type: SiteQuality
SIO_000300: -1.309e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.314e0

DP
type: SiteQuality
SIO_000300: 1.531018e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.123e0

GenotypeQuality
all individuals: 8500
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1279
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40782
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3277
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1961
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501456412720339e-5
allele num: 66602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16222
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.243e1

MQRankSum
type: SiteQuality
SIO_000300: -5.639999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.179999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.959e0

VQSLOD
type: SiteQuality
SIO_000300: 7.8e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.526696e6

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2888
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40691
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3272
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16170
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.37e-1

QD
type: SiteQuality
SIO_000300: 1.094e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.49e-1

FS
type: SiteQuality
SIO_000300: 3.288e0

DP
type: SiteQuality
SIO_000300: 1.525624e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.005e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3270
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2881
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40570
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16090
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.63020030816641e-5
allele num: 10384
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.854e0

DP
type: SiteQuality
SIO_000300: 1.523892e6

FS
type: SiteQuality
SIO_000300: 2.569e0

MQRankSum
type: SiteQuality
SIO_000300: 4.5e-1

QD
type: SiteQuality
SIO_000300: 1.372e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8455
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2873
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1960
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1280
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66456
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.641342074816814e-5
allele num: 10372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15774
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.98e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.101e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.06e0

QD
type: SiteQuality
SIO_000300: 1.179e1

MQRankSum
type: SiteQuality
SIO_000300: 9.9e-2

FS
type: SiteQuality
SIO_000300: 2.508e0

DP
type: SiteQuality
SIO_000300: 1.517028e6

GenotypeQuality
all individuals: 8433
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3266
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1232
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39773
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 773
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2875
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1281
bin: 9.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.518752824220515e-5
allele num: 66390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -9.9e-2

FS
type: SiteQuality
SIO_000300: 2.602e0

DP
type: SiteQuality
SIO_000300: 1.513098e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.93e-1

QD
type: SiteQuality
SIO_000300: 1.227e1

VQSLOD
type: SiteQuality
SIO_000300: 9.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.03e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1957
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8386
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38809
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2860
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3261
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2105
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510528382828313e-5
allele num: 66202
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14986
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.013e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 1.332e0

VQSLOD
type: SiteQuality
SIO_000300: 3.82e-1

DP
type: SiteQuality
SIO_000300: 1.49958e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.238e0

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8203
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1949
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1279
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 771
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.744733581164808e-5
allele num: 12912
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10176
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65416
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.23e-1

DP
type: SiteQuality
SIO_000300: 1.456342e6

FS
type: SiteQuality
SIO_000300: 8.736000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.55e-1

QD
type: SiteQuality
SIO_000300: 1.272e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.259e0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4161
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1279
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8202
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10170
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529472943623627e-5
allele num: 65382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12858
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.3029e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.52e-1

DP
type: SiteQuality
SIO_000300: 1.455228e6

MQ
type: SiteQuality
SIO_000300: 5.973e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.897e0

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-1

QD
type: SiteQuality
SIO_000300: 7.38e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.4e-1

GenotypeQuality
all individuals: 434
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35190
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1947
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1281
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3243
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.611695259177273e-5
allele num: 65052
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11970
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.958e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.4e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.29e0

DP
type: SiteQuality
SIO_000300: 1.439662e6

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.283e1

GenotypeQuality
all individuals: 408
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1945
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1279
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3234
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10994
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.545308443565336e-5
allele num: 64712
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10054
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

FS
type: SiteQuality
SIO_000300: 1.509e0

VQSLOD
type: SiteQuality
SIO_000300: -2.781e0

QD
type: SiteQuality
SIO_000300: 2.868e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.64e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

DP
type: SiteQuality
SIO_000300: 1.422594e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e-1

GenotypeQuality
all individuals: 187
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1681
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1944
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3227
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1281
bin: 9.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10050
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.784998143334571e-4
allele num: 10772
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

DP
type: SiteQuality
SIO_000300: 1.417282e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.06e-1

QD
type: SiteQuality
SIO_000300: 1.317e1

GenotypeQuality
all individuals: 1125
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31682
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1277
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2765
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1942
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.001401962747847e-4
allele num: 9986
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.22e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.295e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.62e0

QD
type: SiteQuality
SIO_000300: 7.31e0

DP
type: SiteQuality
SIO_000300: 1.404173e6

MQ
type: SiteQuality
SIO_000300: 5.913e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.505e0

GenotypeQuality
all individuals: 607
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28638
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1476
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1026
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2248
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7507
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1277
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1941
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9934
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.558166349839509e-5
allele num: 64178
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9924
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.91e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.399818e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.99e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.31e0

QD
type: SiteQuality
SIO_000300: 1.205e1

GenotypeQuality
all individuals: 415
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 890
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 898
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1303
bin: 9.75e1
variant carriers: 27

GenotypeQuality
all individuals: 2732
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1472
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3203
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1268
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1940
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.673916430374225e-5
allele num: 64186
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.228302544440571e-4
allele num: 11476
num of homozygotes: 0

African
type: Population
allele count: 18
allele frequency: 1.811958928930944e-3
allele num: 9934
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9940
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.01e0

VQSLOD
type: SiteQuality
SIO_000300: 5.39e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.588e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

DP
type: SiteQuality
SIO_000300: 1.399803e6

GenotypeQuality
all individuals: 115
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2314
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 831
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6995
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 9306
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999940001199976e-5
allele num: 66668
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.094e0

MQ
type: SiteQuality
SIO_000300: 5.913e1

FS
type: SiteQuality
SIO_000300: 5.174e0

MQRankSum
type: SiteQuality
SIO_000300: -8.78e-1

QD
type: SiteQuality
SIO_000300: 1.864e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 2.033172e6

GenotypeQuality
all individuals: 77
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2313
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9308
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37689
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6988
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 829
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500105007350515e-5
allele num: 66662
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 2.032617e6

MQRankSum
type: SiteQuality
SIO_000300: 1.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.3e-1

FS
type: SiteQuality
SIO_000300: 3.755e0

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.07e-1

MQ
type: SiteQuality
SIO_000300: 5.985e1

QD
type: SiteQuality
SIO_000300: 1.029e1

GenotypeQuality
all individuals: 6983
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9305
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37798
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5001500150015e-5
allele num: 66660
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

MQRankSum
type: SiteQuality
SIO_000300: 5.13e-1

DP
type: SiteQuality
SIO_000300: 2.032697e6

FS
type: SiteQuality
SIO_000300: 4.182e0

QD
type: SiteQuality
SIO_000300: 1.266e1

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9302
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6980
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2102
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 821
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2306
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999940001199976e-5
allele num: 66668
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.988e1

QD
type: SiteQuality
SIO_000300: 1.188e1

VQSLOD
type: SiteQuality
SIO_000300: 9.399999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e0

MQRankSum
type: SiteQuality
SIO_000300: 3.7e-2

DP
type: SiteQuality
SIO_000300: 2.032449e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.8e-1

FS
type: SiteQuality
SIO_000300: 5.287e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 2309
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2097
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.199999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.953e1

DP
type: SiteQuality
SIO_000300: 2.032179e6

FS
type: SiteQuality
SIO_000300: 7.778e0

MQRankSum
type: SiteQuality
SIO_000300: -2.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.48e-1

QD
type: SiteQuality
SIO_000300: 1.043e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.035e0

GenotypeQuality
all individuals: 86
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2098
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2309
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.817e0

VQSLOD
type: SiteQuality
SIO_000300: 6.76e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.27e0

DP
type: SiteQuality
SIO_000300: 2.032143e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.185e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.167e1

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2309
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.282e1

FS
type: SiteQuality
SIO_000300: 6.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.49e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.66e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

VQSLOD
type: SiteQuality
SIO_000300: 6.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.03215e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6971
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 160
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2291
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9256
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500195025353296e-5
allele num: 66658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.592912705272256e-4
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 8.665511265164644e-4
allele num: 10386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.031977e6

FS
type: SiteQuality
SIO_000300: 5.42e-1

QD
type: SiteQuality
SIO_000300: 1.132e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.94e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

MQRankSum
type: SiteQuality
SIO_000300: -2.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

GenotypeQuality
all individuals: 2083
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9258
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2292
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500240038406145e-5
allele num: 66656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.931e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.54e0

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

FS
type: SiteQuality
SIO_000300: 1.879e0

DP
type: SiteQuality
SIO_000300: 2.031307e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.43e-1

QD
type: SiteQuality
SIO_000300: 1.25e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.95e-1

GenotypeQuality
all individuals: 79
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.25e1
variant carriers: 6

GenotypeQuality
all individuals: 229
bin: 9.25e1
variant carriers: 12

GenotypeQuality
all individuals: 2239
bin: 7.25e1
variant carriers: 6

GenotypeQuality
all individuals: 127
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 215
bin: 8.75e1
variant carriers: 6

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7634
bin: 9.75e1
variant carriers: 7172

European (Finnish)
type: Population
allele count: 47
allele frequency: 7.106138494103417e-3
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2154
allele frequency: 3.232001920595384e-2
allele num: 66646
num of homozygotes: 40

South Asian
type: Population
allele count: 1636
allele frequency: 9.910346498667313e-2
allele num: 16508
num of homozygotes: 99

African
type: Population
allele count: 2774
allele frequency: 2.670903138840747e-1
allele num: 10386
num of homozygotes: 381

East Asian
type: Population
allele count: 665
allele frequency: 7.684307834527386e-2
allele num: 8654
num of homozygotes: 29

Latino
type: Population
allele count: 465
allele frequency: 4.019709543568465e-2
allele num: 11568
num of homozygotes: 9

Other
type: Population
allele count: 50
allele frequency: 5.518763796909492e-2
allele num: 906
num of homozygotes: 6

VQSLOD
type: SiteQuality
SIO_000300: 4.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.14e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e-1

QD
type: SiteQuality
SIO_000300: 1.254e1

FS
type: SiteQuality
SIO_000300: 1.804e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.159e0

DP
type: SiteQuality
SIO_000300: 2.078423e6

MQRankSum
type: SiteQuality
SIO_000300: 1.24e-1