16-8990973-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8990973
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8990973
    reference: chr 16
allele count: 2
allele frequency: 1.651336757104876e-5
allele num: 121114
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2719-17A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2671-17A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.186-17A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000567113
  gene symbol: USP7
  hgvsc: ENST00000567113.1:n.139A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.269-17A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2304-17A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2422-17A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2422-17A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2702-17A>G
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5546
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2171
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4964
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3366
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5412
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4113
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2247
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1025
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47823
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD

16-8990986-TTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8990986
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8990984
    reference: chr 16
allele count: 2
allele frequency: 1.653521173338625e-5
allele num: 120954
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2304-32_*2304-31delGA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.269-32_269-31delGA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000567113
  gene symbol: USP7
  hgvsc: ENST00000567113.1:n.124_125delGA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2702-32_*2702-31delGA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2422-32_2422-31delGA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.186-32_186-31delGA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2719-32_2719-31delGA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2671-32_2671-31delGA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2422-32_2422-31delGA
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5412
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4113
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5213
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2902
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5545
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: TTC
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/16-8990992-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8990992
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8990992
    reference: chr 16
allele count: 1
allele frequency: 8.273625337150233e-6
allele num: 120866
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000567113
  gene symbol: USP7
  hgvsc: ENST00000567113.1:n.120T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2304-36T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2671-36T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.186-36T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.269-36T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2702-36T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2422-36T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2422-36T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2719-36T>G
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1874
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5545
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4113
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4964
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2789
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5412
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 928
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD

16-8990998-TAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8990998
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8990996
    reference: chr 16
allele count: 1
allele frequency: 8.280613427842734e-6
allele num: 120764
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000567113
  gene symbol: USP7
  hgvsc: ENST00000567113.1:n.112_113delTT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2304-44_*2304-43delTT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2671-44_2671-43delTT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.186-44_186-43delTT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2422-44_2422-43delTT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2702-44_*2702-43delTT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2719-44_2719-43delTT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.269-44_269-43delTT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2422-44_2422-43delTT
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5545
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5412
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 935
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: TAA
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

16-8991006-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8991006
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8991006
    reference: chr 16
allele count: 1
allele frequency: 8.297928836962294e-6
allele num: 120512
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2671-50G>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2422-50G>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.269-50G>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2719-50G>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2702-50G>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000567113
  gene symbol: USP7
  hgvsc: ENST00000567113.1:n.106G>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2422-50G>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2304-50G>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.186-50G>C
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5411
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5545
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4964
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1209
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47817
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-8992168-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992168
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992168
    reference: chr 16
allele count: 2
allele frequency: 1.688732774925696e-5
allele num: 118432
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2303+49A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2670+49A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2701+49A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2718+49A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.185+49A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.268+49A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2421+49A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2421+49A>G
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5728
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3574
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2847
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3062
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12158
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2244
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6760
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3633
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1576
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28171
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-8992172-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992172
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992172
    reference: chr 16
allele count: 1
allele frequency: 8.448943037226043e-6
allele num: 118358
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.185+45G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.268+45G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2718+45G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2421+45G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2670+45G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2303+45G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2421+45G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2701+45G>A
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3567
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12265
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3061
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6290
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3584
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1206
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1175
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

16-8992181-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992181
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992181
    reference: chr 16
allele count: 1
allele frequency: 8.425309630128907e-6
allele num: 118690
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2303+36T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2421+36T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.268+36T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2718+36T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2701+36T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2670+36T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2421+36T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.185+36T>C
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3062
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7803
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1412
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18211
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/16-8992185-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992185
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992185
    reference: chr 16
allele count: 4
allele frequency: 3.366606628848452e-5
allele num: 118814
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2303+32T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2421+32T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2718+32T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2670+32T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.185+32T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.268+32T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2701+32T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2421+32T>G
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8328
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12689
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1615
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 616
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3903
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum

16-8992185-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992185
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992185
    reference: chr 16
allele count: 1
allele frequency: 8.41651657212113e-6
allele num: 118814
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2670+32T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2718+32T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2421+32T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.268+32T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2421+32T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2303+32T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2701+32T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.185+32T>C
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1420
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18834
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1222
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/16-8992196-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992196
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992196
    reference: chr 16
allele count: 1
allele frequency: 8.386025527061704e-6
allele num: 119246
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2718+21G>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.185+21G>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2421+21G>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2670+21G>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2421+21G>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.268+21G>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2701+21G>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2303+21G>T
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3061
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9243
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3584
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28217
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1272
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1232
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: C
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

16-8992198-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992198
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992198
    reference: chr 16
allele count: 1
allele frequency: 8.377875705836028e-6
allele num: 119362
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2718+19A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.185+19A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2421+19A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.268+19A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2421+19A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2701+19A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2303+19A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2670+19A>G
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7054
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3608
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3062
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13006
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1446
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1663
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28220
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ

16-8992204-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992204
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992205
    reference: chr 16
allele count: 1
allele frequency: 8.360085607276618e-6
allele num: 119616
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2670+12dupT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.268+12dupT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2421+12dupT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2718+12dupT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2701+12dupT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.185+12dupT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2421+12dupT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2303+12dupT
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2516
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7099
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28221
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1449
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1236
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff

16-8992209-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992209
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992209
    reference: chr 16
allele count: 1
allele frequency: 8.343484572897024e-6
allele num: 119854
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2421+8T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2421+8T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2670+8T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2718+8T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.268+8T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.185+8T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2701+8T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2303+8T>C
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9667
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13199
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1239
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20667
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
hgvs: c.2718+8T>C
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

16-8992209-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992209
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992209
    reference: chr 16
allele count: 1
allele frequency: 8.343484572897024e-6
allele num: 119854
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2718+8T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.268+8T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2421+8T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2303+8T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2421+8T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2701+8T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2670+8T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.185+8T>A
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9667
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
hgvs: c.2718+8T>A
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum

16-8992229-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992229
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992229
    reference: chr 16
allele count: 1
allele frequency: 8.29462508294625e-6
allele num: 120560
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2658A>G
  hgvsp: ENST00000381886.4:c.2658A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2706A>G
  hgvsp: ENST00000344836.4:c.2706A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2409A>G
  hgvsp: ENST00000535863.1:c.2409A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.256A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2409A>G
  hgvsp: ENST00000563085.1:c.2409A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2689A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.173A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2291A>G
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7146
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13376
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4201
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln902Gln
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

16-8992229-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992229
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992229
    reference: chr 16
allele count: 1
allele frequency: 8.29462508294625e-6
allele num: 120560
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.256A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2658A>C
  hgvsp: ENSP00000371310.4:p.Gln886His
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2409A>C
  hgvsp: ENSP00000454795.1:p.Gln803His
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2409A>C
  hgvsp: ENSP00000443646.1:p.Gln803His
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.173A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2706A>C
  hgvsp: ENSP00000343535.4:p.Gln902His
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2291A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2689A>C
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13376
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7146
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1695
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1469
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gln902His
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

16-8992274-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992274
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992274
    reference: chr 16
allele count: 1
allele frequency: 8.267059076404159e-6
allele num: 120962
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2644C>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.211C>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.128C>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2364C>A
  hgvsp: ENSP00000454795.1:p.Asp788Glu
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2613C>A
  hgvsp: ENSP00000371310.4:p.Asp871Glu
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2364C>A
  hgvsp: ENSP00000443646.1:p.Asp788Glu
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2661C>A
  hgvsp: ENSP00000343535.4:p.Asp887Glu
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2246C>A
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3066
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9984
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28249
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1244
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp887Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

16-8992277-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992277
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992277
    reference: chr 16
allele count: 1
allele frequency: 8.266922390132602e-6
allele num: 120964
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2243A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2361A>C
  hgvsp: ENST00000563085.1:c.2361A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2361A>C
  hgvsp: ENST00000535863.1:c.2361A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2641A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.125A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2658A>C
  hgvsp: ENST00000344836.4:c.2658A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2610A>C
  hgvsp: ENST00000381886.4:c.2610A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.208A>C
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13464
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9977
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1707
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1244
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr886Thr
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ

16-8992295-C-CTTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992295
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992298
    reference: chr 16
allele count: 1
allele frequency: 8.266239026567692e-6
allele num: 120974
alternate allele: CTTA
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2641-2_2641-1insTAA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2344-2_2344-1insTAA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2593-2_2593-1insTAA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2344-2_2344-1insTAA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2226-2_*2226-1insTAA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.106_107insTAA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2624-2_*2624-1insTAA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.191-2_191-1insTAA
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: splice acceptor
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21094
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1713
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1477
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28250
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1362
  bin: 7.25e1
  variant carriers: 0
hgvs: c.2641-2_2641-1insTAA
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

16-8992297-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992297
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992297
    reference: chr 16
allele count: 1
allele frequency: 8.266649031148734e-6
allele num: 120968
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2226-3T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.191-3T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2344-3T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2624-3T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2593-3T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.105T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2641-3T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2344-3T>C
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7187
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1713
  bin: 7.75e1
  variant carriers: 0
hgvs: c.2641-3T>C
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

16-8992303-AAAAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992303
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992299
    reference: chr 16
allele count: 119
allele frequency: 9.835035868954345e-4
allele num: 120996
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2344-13_2344-10delCTTT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2593-13_2593-10delCTTT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2344-13_2344-10delCTTT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2641-13_2641-10delCTTT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.95_98delCTTT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.191-13_191-10delCTTT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2624-13_*2624-10delCTTT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2226-13_*2226-10delCTTT
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13498
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3619
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2602
  bin: 9.75e1
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 3438
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3578
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 9832
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1363
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1712
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 1
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: AAAAG
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

16-8992305-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992305
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992305
    reference: chr 16
allele count: 1
allele frequency: 8.272940865018697e-6
allele num: 120876
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2344-11T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2624-11T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2593-11T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.97T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.191-11T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2641-11T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2344-11T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2226-11T>C
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3055
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13495
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7175
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2556
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3438
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1362
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1479
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1713
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-8992309-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992309
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992309
    reference: chr 16
allele count: 2
allele frequency: 1.652974527662529e-5
allele num: 120994
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2593-15T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.191-15T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2624-15T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.93T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2226-15T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2344-15T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2641-15T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2344-15T>A
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13542
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1360
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21022
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28192
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1246
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1717
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum

16-8992310-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992310
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992310
    reference: chr 16
allele count: 2
allele frequency: 1.652892561983471e-5
allele num: 121000
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.191-16T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2641-16T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2593-16T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2624-16T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.92T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2344-16T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2344-16T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2226-16T>A
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3627
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28192
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4231
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

16-8992312-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992312
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992312
    reference: chr 16
allele count: 2
allele frequency: 1.652947204866277e-5
allele num: 120996
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2226-18T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2641-18T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2344-18T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2344-18T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.90T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2624-18T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2593-18T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.191-18T>C
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9746
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20972
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/16-8992315-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992315
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992315
    reference: chr 16
allele count: 1
allele frequency: 8.265282507356101e-6
allele num: 120988
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2624-21G>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2344-21G>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2641-21G>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2344-21G>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.87G>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.191-21G>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2593-21G>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2226-21G>T
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13568
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1246
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1717
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

16-8992317-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992317
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992317
    reference: chr 16
allele count: 2
allele frequency: 1.652810604432838e-5
allele num: 121006
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2226-23G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2624-23G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2593-23G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.85G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2344-23G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2641-23G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.191-23G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2344-23G>A
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13578
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28190
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1717
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4217
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1246
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

16-8992320-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992320
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992320
    reference: chr 16
allele count: 1
allele frequency: 8.264326209484141e-6
allele num: 121002
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2344-26G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.191-26G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.82G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2641-26G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2226-26G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2344-26G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2593-26G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2624-26G>A
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3547
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9536
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3637
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13613
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4211
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

16-8992322-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992322
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992322
    reference: chr 16
allele count: 2
allele frequency: 1.652592090694254e-5
allele num: 121022
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2226-28C>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.191-28C>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2641-28C>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2593-28C>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2624-28C>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.80C>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2344-28C>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2344-28C>G
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3547
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3438
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9548
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3633
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1247
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP

16-8992324-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992324
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992324
    reference: chr 16
allele count: 1
allele frequency: 8.262277744728666e-6
allele num: 121032
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2624-30A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2344-30A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2593-30A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.191-30A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2641-30A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.78A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2226-30A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2344-30A>G
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13609
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9563
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1368
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

16-8992327-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992327
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992327
    reference: chr 16
allele count: 2
allele frequency: 1.652482855490374e-5
allele num: 121030
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2641-33G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2593-33G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2344-33G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2226-33G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.75G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2624-33G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.191-33G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2344-33G>A
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3547
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13632
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7234
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3583
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20665
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1250
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

16-8992328-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992328
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992328
    reference: chr 16
allele count: 4
allele frequency: 3.304528856798242e-5
allele num: 121046
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2624-34C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.74C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2344-34C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2226-34C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2593-34C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2641-34C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.191-34C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2344-34C>T
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9488
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3057
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3640
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7233
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3583
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28191
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 20695
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/16-8992334-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992334
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992334
    reference: chr 16
allele count: 6
allele frequency: 4.95589255624938e-5
allele num: 121068
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2593-40T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2344-40T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.68T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2624-40T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2641-40T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2226-40T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2344-40T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.191-40T>G
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2530
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9348
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7252
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13709
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3058
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3548
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20429
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1253
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 1
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: A
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

http://identifiers.org/exac.variant/16-8992337-A-AC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992337
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992338
    reference: chr 16
allele count: 2
allele frequency: 1.652209830648492e-5
allele num: 121050
alternate allele: AC
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2641-44dupG
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2344-44dupG
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2624-44dupG
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2344-44dupG
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.64dupG
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.191-44dupG
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2593-44dupG
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2226-44dupG
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7254
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3548
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9297
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2530
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4234
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

16-8992341-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992341
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992341
    reference: chr 16
allele count: 13
allele frequency: 1.073829938378682e-4
allele num: 121062
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2592+47G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2343+47G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.190+47G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.61G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2343+47G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2623+47G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2225+47G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2640+47G>A
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3551
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9137
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13848
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7293
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1389
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1508
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1252
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS

16-8992342-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992342
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992342
    reference: chr 16
allele count: 48151
allele frequency: 3.976004095653323e-1
allele num: 121104
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2592+46C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.60C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.190+46C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2225+46C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2640+46C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2343+46C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2343+46C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2623+46C>T
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 3.75e1
  variant carriers: 1135
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 6.25e1
  variant carriers: 1474
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 1.75e1
  variant carriers: 273
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5478
  bin: 2.25e1
  variant carriers: 663
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 5.25e1
  variant carriers: 867
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 7.25e1
  variant carriers: 2086
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.25e1
  variant carriers: 106
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 7.75e1
  variant carriers: 2336
genotype depth: GenotypeDepth
  all individuals: 2474
  bin: 8.25e1
  variant carriers: 2459
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 4.75e1
  variant carriers: 843
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 4.25e1
  variant carriers: 902
genotype depth: GenotypeDepth
  all individuals: 15126
  bin: 9.75e1
  variant carriers: 15108
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 5.75e1
  variant carriers: 1092
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 6.75e1
  variant carriers: 1858
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 9.25e1
  variant carriers: 2446
genotype depth: GenotypeDepth
  all individuals: 11788
  bin: 2.75e1
  variant carriers: 987
genotype depth: GenotypeDepth
  all individuals: 5688
  bin: 3.25e1
  variant carriers: 1193
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 8.75e1
  variant carriers: 2520
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 7.75e1
  variant carriers: 110
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.25e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 16007
  bin: 6.25e1
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 38410
  bin: 9.75e1
  variant carriers: 37527
num of homozygotes: 9806
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

16-8992343-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992343
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992343
    reference: chr 16
allele count: 1
allele frequency: 8.259275166011431e-6
allele num: 121076
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.59T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2623+45T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2592+45T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2343+45T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2343+45T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2640+45T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.190+45T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2225+45T>C
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30896
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12815
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2111
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

16-8992356-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992356
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992356
    reference: chr 16
allele count: 1
allele frequency: 8.260230295220631e-6
allele num: 121062
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.46A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.190+32A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2592+32A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2623+32A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2640+32A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2343+32A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2343+32A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2225+32A>G
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12723
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30706
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8038
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum

16-8992357-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992357
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992357
    reference: chr 16
allele count: 1
allele frequency: 8.261185645363822e-6
allele num: 121048
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2623+31C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.190+31C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2343+31C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.45C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2343+31C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2640+31C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2592+31C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2225+31C>T
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30704
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12723
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42500
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1133
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP

16-8992363-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992363
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992363
    reference: chr 16
allele count: 16
allele frequency: 1.321898907781027e-4
allele num: 121038
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.190+25A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2225+25A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2592+25A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.39A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2343+25A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2623+25A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2343+25A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2640+25A>G
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12663
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10855
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30757
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-8992368-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992368
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992368
    reference: chr 16
allele count: 2
allele frequency: 1.652100645971353e-5
allele num: 121058
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.34T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2343+20T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2225+20T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.190+20T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2592+20T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2623+20T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2640+20T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2343+20T>G
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12641
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2577
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1808
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-8992369-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992369
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992369
    reference: chr 16
allele count: 1
allele frequency: 8.262277744728666e-6
allele num: 121032
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.33G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2640+19G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2343+19G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2592+19G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2343+19G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2225+19G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.190+19G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2623+19G>A
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30745
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12655
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10941
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2015
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum

16-8992372-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992372
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992372
    reference: chr 16
allele count: 1
allele frequency: 8.260503229856763e-6
allele num: 121058
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2640+16A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2592+16A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.30A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2343+16A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2225+16A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2343+16A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2623+16A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.190+16A>G
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12639
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10985
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2572
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1809
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-8992374-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992374
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992374
    reference: chr 16
allele count: 1
allele frequency: 8.260503229856763e-6
allele num: 121058
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.190+14T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2640+14T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2343+14T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.28T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2592+14T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2225+14T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2623+14T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2343+14T>G
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30763
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12636
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11004
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7965
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

16-8992384-A-ATACC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992384
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992388
    reference: chr 16
allele count: 1
allele frequency: 8.260912665631299e-6
allele num: 121052
alternate allele: ATACC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.190_190+3dupGGTA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.14_17dupGGTA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2592_2592+3dupGGTA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2343_2343+3dupGGTA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2343_2343+3dupGGTA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2623_*2623+3dupGGTA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2640_2640+3dupGGTA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2225_*2225+3dupGGTA
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12636
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11040
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30856
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7935
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 3.25e1
  variant carriers: 0
hgvs: c.2640_2640+3dupGGTA
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

16-8992397-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992397
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992397
    reference: chr 16
allele count: 2
allele frequency: 1.652237129072764e-5
allele num: 121048
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2334C>T
  hgvsp: ENST00000535863.1:c.2334C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2334C>T
  hgvsp: ENST00000563085.1:c.2334C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.181C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2614C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2216C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2631C>T
  hgvsp: ENST00000344836.4:c.2631C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2583C>T
  hgvsp: ENST00000381886.4:c.2583C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000565883
  gene symbol: USP7
  hgvsc: ENST00000565883.1:n.5C>T
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11234
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12620
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Tyr877Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

16-8992411-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992411
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992411
    reference: chr 16
allele count: 1
allele frequency: 8.259138737012504e-6
allele num: 121078
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2569C>T
  hgvsp: ENSP00000371310.4:p.Pro857Ser
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.167C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2320C>T
  hgvsp: ENSP00000454795.1:p.Pro774Ser
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2202C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2320C>T
  hgvsp: ENSP00000443646.1:p.Pro774Ser
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2600C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2617C>T
  hgvsp: ENSP00000343535.4:p.Pro873Ser
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30999
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2563
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro873Ser
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP

16-8992430-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992430
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992430
    reference: chr 16
allele count: 1
allele frequency: 8.260366760284156e-6
allele num: 121060
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.148G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2581G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2550G>A
  hgvsp: ENST00000381886.4:c.2550G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2301G>A
  hgvsp: ENST00000563085.1:c.2301G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2301G>A
  hgvsp: ENST00000535863.1:c.2301G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2183G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2598G>A
  hgvsp: ENST00000344836.4:c.2598G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31006
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7929
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gln866Gln
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

16-8992433-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992433
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992433
    reference: chr 16
allele count: 3
allele frequency: 2.478478544637399e-5
allele num: 121042
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2547A>G
  hgvsp: ENST00000381886.4:c.2547A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2298A>G
  hgvsp: ENST00000563085.1:c.2298A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2578A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2298A>G
  hgvsp: ENST00000535863.1:c.2298A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2180A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2595A>G
  hgvsp: ENST00000344836.4:c.2595A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.145A>G
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31023
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12608
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2560
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu865Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

16-8992484-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992484
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992484
    reference: chr 16
allele count: 1
allele frequency: 8.385462961410099e-6
allele num: 119254
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2496C>T
  hgvsp: ENST00000381886.4:c.2496C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000459594
  ensembl transcript: ENST00000563043
  gene symbol: USP7
  hgvsc: ENST00000563043.1:c.*92C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2247C>T
  hgvsp: ENST00000563085.1:c.2247C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2527C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2247C>T
  hgvsp: ENST00000535863.1:c.2247C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.94C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2129C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2544C>T
  hgvsp: ENST00000344836.4:c.2544C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10265
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12399
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30208
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2541
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42022
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly848Gly
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-8992493-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992493
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992493
    reference: chr 16
allele count: 2
allele frequency: 1.69940860580518e-5
allele num: 117688
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2238T>C
  hgvsp: ENST00000563085.1:c.2238T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000459594
  ensembl transcript: ENST00000563043
  gene symbol: USP7
  hgvsc: ENST00000563043.1:c.*83T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2535T>C
  hgvsp: ENST00000344836.4:c.2535T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2238T>C
  hgvsp: ENST00000535863.1:c.2238T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2518T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2487T>C
  hgvsp: ENST00000381886.4:c.2487T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.85T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2120T>C
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9651
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12084
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1852
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Tyr845Tyr
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

16-8992498-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992498
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992498
    reference: chr 16
allele count: 3
allele frequency: 2.565549797321566e-5
allele num: 116934
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2235-2A>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2515-2A>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2532-2A>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.80A>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2117-2A>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2235-2A>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2484-2A>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000459594
  ensembl transcript: ENST00000563043
  gene symbol: USP7
  hgvsc: ENST00000563043.1:c.*80-2A>T
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: splice acceptor
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9418
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11893
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28707
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39556
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
hgvs: c.2532-2A>T
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS

16-8992499-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992499
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992499
    reference: chr 16
allele count: 2
allele frequency: 1.719897494109351e-5
allele num: 116286
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000459594
  ensembl transcript: ENST00000563043
  gene symbol: USP7
  hgvsc: ENST00000563043.1:c.*80-3T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2484-3T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.79T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2235-3T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2515-3T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2235-3T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2532-3T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2117-3T>C
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9195
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38375
  bin: 6.25e1
  variant carriers: 0
hgvs: c.2532-3T>C
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

16-8992512-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992512
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992512
    reference: chr 16
allele count: 1
allele frequency: 8.765932081558232e-6
allele num: 114078
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.66C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2235-16C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2515-16C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2532-16C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000459594
  ensembl transcript: ENST00000563043
  gene symbol: USP7
  hgvsc: ENST00000563043.1:c.*80-16C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2235-16C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2484-16C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2117-16C>T
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8686
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10262
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25734
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6355
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1387
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6986
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

16-8992515-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992515
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992515
    reference: chr 16
allele count: 16
allele frequency: 1.413927182750088e-4
allele num: 113160
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2484-19A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2235-19A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2532-19A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2117-19A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.63A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2515-19A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2235-19A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000459594
  ensembl transcript: ENST00000563043
  gene symbol: USP7
  hgvsc: ENST00000563043.1:c.*80-19A>G
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7743
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3569
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24461
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8540
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9466
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2082
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1555
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2491
  bin: 9.75e1
  variant carriers: 16
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
reference allele: T
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

16-8992524-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992524
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992524
    reference: chr 16
allele count: 2
allele frequency: 1.790798875378306e-5
allele num: 111682
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2532-28T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2515-28T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2484-28T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.54T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2235-28T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2235-28T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000459594
  ensembl transcript: ENST00000563043
  gene symbol: USP7
  hgvsc: ENST00000563043.1:c.*80-28T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2117-28T>C
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7387
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4823
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7699
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4025
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11661
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19935
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9468
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5027
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4183
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

16-8992525-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992525
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992525
    reference: chr 16
allele count: 1
allele frequency: 8.968127275662296e-6
allele num: 111506
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2235-29A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2515-29A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2484-29A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2117-29A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2235-29A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000459594
  ensembl transcript: ENST00000563043
  gene symbol: USP7
  hgvsc: ENST00000563043.1:c.*80-29A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2532-29A>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.53A>G
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5565
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4069
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7175
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2862
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2914
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4537
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

16-8992528-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992528
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992528
    reference: chr 16
allele count: 1
allele frequency: 9.041427822281694e-6
allele num: 110602
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2515-32G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2532-32G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.50G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2235-32G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2117-32G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000459594
  ensembl transcript: ENST00000563043
  gene symbol: USP7
  hgvsc: ENST00000563043.1:c.*80-32G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2484-32G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2235-32G>A
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6573
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8044
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13007
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1239
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21958
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3984
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3283
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff

16-8992528-CTTGT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992528
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992524
    reference: chr 16
allele count: 3
allele frequency: 2.712428346684508e-5
allele num: 110602
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000459594
  ensembl transcript: ENST00000563043
  gene symbol: USP7
  hgvsc: ENST00000563043.1:c.*80-36_*80-33delACAA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.46_49delACAA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2117-36_*2117-33delACAA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2235-36_2235-33delACAA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2515-36_*2515-33delACAA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2532-36_2532-33delACAA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2235-36_2235-33delACAA
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2484-36_2484-33delACAA
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13007
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6573
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8044
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6730
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4596
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1376
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21958
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: CTTGT
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD

16-8992529-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992529
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992529
    reference: chr 16
allele count: 1
allele frequency: 9.080672696233337e-6
allele num: 110124
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000459594
  ensembl transcript: ENST00000563043
  gene symbol: USP7
  hgvsc: ENST00000563043.1:c.*80-33A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2515-33A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2484-33A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2532-33A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.49A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2235-33A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2117-33A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2235-33A>C
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4455
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10360
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15011
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18914
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9590
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1685
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1082
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

16-8992535-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992535
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992535
    reference: chr 16
allele count: 59
allele frequency: 5.436184719714002e-4
allele num: 108532
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2117-39T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2235-39T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.43T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2484-39T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2515-39T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2235-39T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2532-39T>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000459594
  ensembl transcript: ENST00000563043
  gene symbol: USP7
  hgvsc: ENST00000563043.1:c.*80-39T>C
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13067
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10970
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7242
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4117
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15064
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13362
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1319
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7068
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9096
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2770
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

16-8992536-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992536
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992536
    reference: chr 16
allele count: 1
allele frequency: 9.219648915769288e-6
allele num: 108464
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.42A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2117-40A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2484-40A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2235-40A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2235-40A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2532-40A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000459594
  ensembl transcript: ENST00000563043
  gene symbol: USP7
  hgvsc: ENST00000563043.1:c.*80-40A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2515-40A>C
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15046
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7324
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13074
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10930
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9172
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2470
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 874
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3104
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2758
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13750
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

16-8992538-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992538
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992537
    reference: chr 16
allele count: 1
allele frequency: 9.263376315399436e-6
allele num: 107952
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2484-43delC
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2235-43delC
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2235-43delC
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.39delC
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2117-43delC
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2515-43delC
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2532-43delC
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000459594
  ensembl transcript: ENST00000563043
  gene symbol: USP7
  hgvsc: ENST00000563043.1:c.*80-43delC
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9730
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5406
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12884
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15846
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 842
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3834
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7214
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1363
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3185
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: TG
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

16-8992539-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992539
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992539
    reference: chr 16
allele count: 1
allele frequency: 9.330447115025753e-6
allele num: 107176
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2532-43C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2515-43C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2117-43C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000459594
  ensembl transcript: ENST00000563043
  gene symbol: USP7
  hgvsc: ENST00000563043.1:c.*80-43C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2235-43C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.39C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2484-43C>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2235-43C>T
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12811
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3553
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15802
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5541
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9129
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7198
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11156
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8702
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2465
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1187
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1445
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: G
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

16-8992540-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992540
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992540
    reference: chr 16
allele count: 1
allele frequency: 9.359439931114522e-6
allele num: 106844
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2117-44G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2484-44G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2532-44G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2515-44G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.38G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000459594
  ensembl transcript: ENST00000563043
  gene symbol: USP7
  hgvsc: ENST00000563043.1:c.*80-44G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2235-44G>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2235-44G>A
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12768
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5685
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15727
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2999
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8573
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1457
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7234
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

16-8992543-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992543
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992543
    reference: chr 16
allele count: 3
allele frequency: 2.827467908239241e-5
allele num: 106102
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.35T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2484-47T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2235-47T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2235-47T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2515-47T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2532-47T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000459594
  ensembl transcript: ENST00000563043
  gene symbol: USP7
  hgvsc: ENST00000563043.1:c.*80-47T>A
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2117-47T>A
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11380
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7029
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15511
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12546
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3021
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3611
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2468
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 7932
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1470
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-8992544-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992544
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992544
    reference: chr 16
allele count: 2
allele frequency: 1.883877774010022e-5
allele num: 106164
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.34T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2532-48T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2515-48T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000459594
  ensembl transcript: ENST00000563043
  gene symbol: USP7
  hgvsc: ENST00000563043.1:c.*80-48T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2235-48T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2235-48T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2484-48T>G
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2117-48T>G
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7022
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3001
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15497
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11405
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2561
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 897
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1461
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7368
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/16-8992548-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992548
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992548
    reference: chr 16
allele count: 42
allele frequency: 4.011997783848843e-4
allele num: 104686
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2532-52G>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000459594
  ensembl transcript: ENST00000563043
  gene symbol: USP7
  hgvsc: ENST00000563043.1:c.*80-52G>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2484-52G>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2235-52G>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2235-52G>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2515-52G>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.30G>T
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2117-52G>T
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15416
  bin: 1.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12487
  bin: 1.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6508
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12063
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2879
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2503
  bin: 9.75e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 4614
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7379
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3789
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1213
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/16-8992548-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992548
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992547
    reference: chr 16
allele count: 3
allele frequency: 2.865712702749174e-5
allele num: 104686
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2117-53delT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2235-53delT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2484-53delT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2235-53delT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000459594
  ensembl transcript: ENST00000563043
  gene symbol: USP7
  hgvsc: ENST00000563043.1:c.*80-53delT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2515-53delT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000187555
  ensembl transcript: ENST00000562615
  gene symbol: USP7
  hgvsc: ENST00000562615.1:n.29delT
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2532-53delT
  variant of: http://identifiers.org/hgnc/12630
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15416
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6508
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12487
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1451
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1213
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7379
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2879
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6041
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: CA
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-8992927-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 8992927
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 8992927
    reference: chr 16
allele count: 1
allele frequency: 8.252595441266279e-6
allele num: 121174
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454362
  ensembl transcript: ENST00000563961
  gene symbol: USP7
  hgvsc: ENST00000563961.1:c.*2116+51A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000343535
  ensembl transcript: ENST00000344836
  gene symbol: USP7
  hgvsc: ENST00000344836.4:c.2531+51A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000454795
  ensembl transcript: ENST00000563085
  gene symbol: USP7
  hgvsc: ENST00000563085.1:c.2234+51A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000456258
  ensembl transcript: ENST00000565455
  gene symbol: USP7
  hgvsc: ENST00000565455.1:c.*2514+51A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000443646
  ensembl transcript: ENST00000535863
  gene symbol: USP7
  hgvsc: ENST00000535863.1:c.2234+51A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000371310
  ensembl transcript: ENST00000381886
  gene symbol: USP7
  hgvsc: ENST00000381886.4:c.2483+51A>C
  variant of: http://identifiers.org/hgnc/12630
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187555
  ensembl protein: ENSP00000459594
  ensembl transcript: ENST00000563043
  gene symbol: USP7
  hgvsc: ENST00000563043.1:c.*79+51A>C
  variant of: http://identifiers.org/hgnc/12630
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2726
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15724
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8406
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001560811622043e-5
allele num: 66632
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.37e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

VQSLOD
type: SiteQuality
SIO_000300: 3.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 6.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.34e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

DP
type: SiteQuality
SIO_000300: 3.769476e6

QD
type: SiteQuality
SIO_000300: 1.436e1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501997656883655e-5
allele num: 66578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.125199068969742e-5
allele num: 16326
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.5e-1

FS
type: SiteQuality
SIO_000300: 2.173e0

MQRankSum
type: SiteQuality
SIO_000300: 2.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

MQ
type: SiteQuality
SIO_000300: 6.023e1

DP
type: SiteQuality
SIO_000300: 3.752582e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

QD
type: SiteQuality
SIO_000300: 1.996e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159017153453871e-4
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16290
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

DP
type: SiteQuality
SIO_000300: 3.741299e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.903e1

MQRankSum
type: SiteQuality
SIO_000300: 9.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.29e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.81e-1

FS
type: SiteQuality
SIO_000300: 3.297e0

VQSLOD
type: SiteQuality
SIO_000300: -1.91e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.156877231867996e-5
allele num: 16242
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.74e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

DP
type: SiteQuality
SIO_000300: 3.735209e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.18e-1

QD
type: SiteQuality
SIO_000300: 4.9e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.721952167995334e-5
allele num: 10286
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16124
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.965e1

QD
type: SiteQuality
SIO_000300: 1.547e1

MQRankSum
type: SiteQuality
SIO_000300: -1.38e-1

DP
type: SiteQuality
SIO_000300: 3.728935e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.464e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.42e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.367424242424242e-4
allele num: 8448
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.558755e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.82e-1

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65342
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.313928526329082e-5
allele num: 15838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

DP
type: SiteQuality
SIO_000300: 2.563883e6

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e-1

QD
type: SiteQuality
SIO_000300: 1.381e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.88e-1

VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15990
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65464
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.707767328456984e-5
allele num: 11484
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.52e0

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.579448e6

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.072e0

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 5.38e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 776
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
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European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.103143118706134e-5
allele num: 65540
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9828
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.587e1

ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.586393e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.93e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.6e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.86e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9828
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.240639041437844e-5
allele num: 16024
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.86e0

DP
type: SiteQuality
SIO_000300: 2.586393e6

MQ
type: SiteQuality
SIO_000300: 5.979e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.93e-1

QD
type: SiteQuality
SIO_000300: 1.587e1

MQRankSum
type: SiteQuality
SIO_000300: -1.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.35e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.167509559639817e-5
allele num: 16214
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65722
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9868
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.601771e6

QD
type: SiteQuality
SIO_000300: 1.292e1

MQRankSum
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SIO_000300: 1.23e0

FS
type: SiteQuality
SIO_000300: 3.238e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQ
type: SiteQuality
SIO_000300: 5.984e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.493e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.129999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520172691617768e-5
allele num: 65782
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16240
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9888
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.19e-1

FS
type: SiteQuality
SIO_000300: 1.585e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.97e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.875e-1

QD
type: SiteQuality
SIO_000300: 1.751e1

MQRankSum
type: SiteQuality
SIO_000300: 1.66e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.76e0

DP
type: SiteQuality
SIO_000300: 2.603926e6

MQ
type: SiteQuality
SIO_000300: 5.918e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9914
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517680983457277e-5
allele num: 65890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.05e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.53e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.24e-1

QD
type: SiteQuality
SIO_000300: 4.82e0

DP
type: SiteQuality
SIO_000300: 2.610431e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514830187535977e-5
allele num: 66014
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9952
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.19e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

FS
type: SiteQuality
SIO_000300: 6.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.93e-1

DP
type: SiteQuality
SIO_000300: 2.613503e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.438e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66014
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.175364362952515e-4
allele num: 8508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9952
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.25e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 5.93e-1

DP
type: SiteQuality
SIO_000300: 2.613503e6

FS
type: SiteQuality
SIO_000300: 6.05e-1

BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
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allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66374
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.922603691208574e-5
allele num: 10078
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.26e0

MQ
type: SiteQuality
SIO_000300: 5.941e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165772907437631e-4
allele num: 8578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10078
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
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allele count: 0
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QD
type: SiteQuality
SIO_000300: 1.414e1

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
SIO_000300: -6.44e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.79e-1

MQ
type: SiteQuality
SIO_000300: 5.941e1

DP
type: SiteQuality
SIO_000300: 2.621826e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
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South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

BaseQRankSum
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ClippingRankSum
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DP
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MQ
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VQSLOD
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FS
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MQRankSum
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QD
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SIO_000300: 8.039999999999999e0

InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 11570
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European (Non-Finnish)
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allele frequency: 1.501411326647048e-5
allele num: 66604
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
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QD
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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FS
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BaseQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 1.501095799933952e-5
allele num: 66618
num of homozygotes: 0

Other
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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African
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South Asian
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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FS
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MQ
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VQSLOD
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BaseQRankSum
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MQRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele num: 8638
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Other
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.34e-1

ClippingRankSum
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SIO_000300: -3.04e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.787e0

BaseQRankSum
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MQRankSum
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SIO_000300: -7.74e-1

DP
type: SiteQuality
SIO_000300: 2.625847e6

InbreedingCoeff
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SIO_000300: 1.0e-4

MQ
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SIO_000300: 6.0e1

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 117

South Asian
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allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66630
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 119
allele frequency: 1.377314814814815e-2
allele num: 8640
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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QD
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MQRankSum
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FS
type: SiteQuality
SIO_000300: 1.373e0

InbreedingCoeff
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SIO_000300: 9.1e-3

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.52e-1

DP
type: SiteQuality
SIO_000300: 2.634261e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 6.066488716330988e-5
allele num: 16484
num of homozygotes: 0

African
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Other
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66624
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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InbreedingCoeff
type: SiteQuality
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QD
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MQRankSum
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FS
type: SiteQuality
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MQ
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BaseQRankSum
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DP
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
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South Asian
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African
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Other
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Latino
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East Asian
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allele frequency: 2.314814814814815e-4
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European (Finnish)
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InbreedingCoeff
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MQRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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ClippingRankSum
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DP
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QD
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FS
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Non-Finnish)
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South Asian
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Other
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Latino
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European (Finnish)
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InbreedingCoeff
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QD
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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FS
type: SiteQuality
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VQSLOD
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DP
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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South Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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allele num: 66634
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Other
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MQRankSum
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FS
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MQ
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ReadPosRankSum
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DP
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InbreedingCoeff
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QD
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

African
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European (Non-Finnish)
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Other
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East Asian
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European (Finnish)
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South Asian
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MQRankSum
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FS
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BaseQRankSum
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DP
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QD
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VQSLOD
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SIO_000300: -8.32e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 83
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10154
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.92e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 1.181e0

DP
type: SiteQuality
SIO_000300: 2.625376e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.276e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.06e-1

QD
type: SiteQuality
SIO_000300: 2.327e1

MQ
type: SiteQuality
SIO_000300: 5.956e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.620000000000001e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500780405811022e-5
allele num: 66632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10152
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.916e0

VQSLOD
type: SiteQuality
SIO_000300: -2.729e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.271e0

DP
type: SiteQuality
SIO_000300: 2.625443e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-2

QD
type: SiteQuality
SIO_000300: 1.673e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.29e0

MQ
type: SiteQuality
SIO_000300: 5.793e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.735e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.000840235265874e-5
allele num: 66648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.32e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.76e-1

FS
type: SiteQuality
SIO_000300: 2.288e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.41e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.2e0

QD
type: SiteQuality
SIO_000300: 1.497e1

DP
type: SiteQuality
SIO_000300: 2.625544e6

GenotypeQuality
all individuals: 256
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variant carriers: 0

GenotypeQuality
all individuals: 121
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10166
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.78e-1

DP
type: SiteQuality
SIO_000300: 2.625331e6

MQRankSum
type: SiteQuality
SIO_000300: -3.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.31e0

QD
type: SiteQuality
SIO_000300: 1.507e1

VQSLOD
type: SiteQuality
SIO_000300: 7.87e-1

FS
type: SiteQuality
SIO_000300: 9.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1368
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 87
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GenotypeQuality
all individuals: 794
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10170
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.214771622934888e-4
allele num: 16464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.43e0

MQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

FS
type: SiteQuality
SIO_000300: 1.295e0

DP
type: SiteQuality
SIO_000300: 2.625794e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

QD
type: SiteQuality
SIO_000300: 1.406e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1366
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10174
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.214181641573579e-4
allele num: 16472
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500330072615976e-5
allele num: 66652
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.8e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.191e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.54e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.709e0

FS
type: SiteQuality
SIO_000300: 6.881e0

DP
type: SiteQuality
SIO_000300: 2.62619e6

QD
type: SiteQuality
SIO_000300: 2.651e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 5

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.911591355599214e-4
allele num: 10180
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66664
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.626782e6

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.28e-1

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.432e0

MQRankSum
type: SiteQuality
SIO_000300: -6.25e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.973e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.39e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 107
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.00048007681229e-5
allele num: 66656
num of homozygotes: 0

DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.164e0

QD
type: SiteQuality
SIO_000300: 1.139e1

MQRankSum
type: SiteQuality
SIO_000300: -9.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.42e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.61e-1

MQ
type: SiteQuality
SIO_000300: 5.94e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 13

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 246
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GenotypeQuality
all individuals: 166
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.244280101687081e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.001320290463902e-5
allele num: 66652
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.985e1

QD
type: SiteQuality
SIO_000300: 1.587e1

MQRankSum
type: SiteQuality
SIO_000300: 1.4e-2

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.628839e6

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 210
bin: 8.75e1
variant carriers: 67

GenotypeQuality
all individuals: 71
bin: 3.75e1
variant carriers: 16

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 3

GenotypeQuality
all individuals: 710
bin: 7.25e1
variant carriers: 57

GenotypeQuality
all individuals: 118
bin: 4.75e1
variant carriers: 38

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 132
bin: 2.25e1
variant carriers: 4

GenotypeQuality
all individuals: 55
bin: 2.75e1
variant carriers: 9

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 14

GenotypeQuality
all individuals: 518
bin: 8.25e1
variant carriers: 124

GenotypeQuality
all individuals: 2940
bin: 6.75e1
variant carriers: 95

GenotypeQuality
all individuals: 349
bin: 9.25e1
variant carriers: 146

Latino
type: Population
allele count: 4410
allele frequency: 3.808948004836759e-1
allele num: 11578
num of homozygotes: 835

Other
type: Population
allele count: 362
allele frequency: 3.995584988962472e-1
allele num: 906
num of homozygotes: 73

African
type: Population
allele count: 3283
allele frequency: 3.201053042121685e-1
allele num: 10256
num of homozygotes: 500

European (Finnish)
type: Population
allele count: 2392
allele frequency: 3.61875945537065e-1
allele num: 6610
num of homozygotes: 444

South Asian
type: Population
allele count: 7762
allele frequency: 4.713956030608527e-1
allele num: 16466
num of homozygotes: 1877

European (Non-Finnish)
type: Population
allele count: 27571
allele frequency: 4.137056599243743e-1
allele num: 66644
num of homozygotes: 5739

East Asian
type: Population
allele count: 2371
allele frequency: 2.742943081906525e-1
allele num: 8644
num of homozygotes: 338

VQSLOD
type: SiteQuality
SIO_000300: 4.22e0

DP
type: SiteQuality
SIO_000300: 4.027538e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.043e1

MQ
type: SiteQuality
SIO_000300: 5.976e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.463e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.61e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.15e-1

GenotypeQuality
all individuals: 2607
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 153
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8113
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1158
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1866
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42575
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.087168249330411e-5
allele num: 16428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66646
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.222e0

DP
type: SiteQuality
SIO_000300: 1.735382e6

FS
type: SiteQuality
SIO_000300: 1.5762e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

MQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.311e0

VQSLOD
type: SiteQuality
SIO_000300: -2.386e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

GenotypeQuality
all individuals: 230
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2603
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1138
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1832
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42409
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2060
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50073536032656e-5
allele num: 66634
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.489e0

VQSLOD
type: SiteQuality
SIO_000300: -2.497e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.68e-1

DP
type: SiteQuality
SIO_000300: 1.731966e6

MQ
type: SiteQuality
SIO_000300: 5.932e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 7.377e0

QD
type: SiteQuality
SIO_000300: 1.161e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 8030
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1827
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2599
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 186
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2049
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.738994935722633e-5
allele num: 10268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66626
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.6e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.704e0

FS
type: SiteQuality
SIO_000300: 4.239e0

QD
type: SiteQuality
SIO_000300: 1.678e1

DP
type: SiteQuality
SIO_000300: 1.73197e6

GenotypeQuality
all individuals: 217
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2030
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1813
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2591
bin: 9.75e1
variant carriers: 16

GenotypeQuality
all individuals: 42578
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7992
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 12
allele frequency: 1.386962552011096e-3
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.503152206544582e-5
allele num: 66620
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.733307377846993e-5
allele num: 10274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.7e-2

MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

FS
type: SiteQuality
SIO_000300: 5.3e-1

DP
type: SiteQuality
SIO_000300: 1.731084e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.62e0

QD
type: SiteQuality
SIO_000300: 1.632e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e-1

GenotypeQuality
all individuals: 7983
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2018
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42770
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1124
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21921482565228e-4
allele num: 16404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.730033e6

FS
type: SiteQuality
SIO_000300: 2.368e0

MQRankSum
type: SiteQuality
SIO_000300: 8.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.65e0

QD
type: SiteQuality
SIO_000300: 1.258e1

MQ
type: SiteQuality
SIO_000300: 5.99e1

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

GenotypeQuality
all individuals: 317
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7965
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1120
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2574
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1798
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42754
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.333e1

FS
type: SiteQuality
SIO_000300: 1.047e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.64e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.6e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

DP
type: SiteQuality
SIO_000300: 1.729907e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.727e0

GenotypeQuality
all individuals: 311
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2016
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7966
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42778
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1123
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10290
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.098304671301378e-5
allele num: 16398
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.51e-1

DP
type: SiteQuality
SIO_000300: 1.729665e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

FS
type: SiteQuality
SIO_000300: 1.516e0

QD
type: SiteQuality
SIO_000300: 1.697e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.91e-1

GenotypeQuality
all individuals: 162
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
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GenotypeQuality
all individuals: 1810
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42798
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1120
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2015
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variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2572
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 422
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500915558490679e-5
allele num: 66626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.57e0

DP
type: SiteQuality
SIO_000300: 1.729697e6

FS
type: SiteQuality
SIO_000300: 7.263e0

MQRankSum
type: SiteQuality
SIO_000300: 6.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.76e0

VQSLOD
type: SiteQuality
SIO_000300: -6.516e-1

MQ
type: SiteQuality
SIO_000300: 5.87e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

QD
type: SiteQuality
SIO_000300: 1.386e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.92e-1

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42875
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2569
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 160
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2011
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.102770657878677e-5
allele num: 16386
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66618
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.01e0

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

DP
type: SiteQuality
SIO_000300: 1.730511e6

FS
type: SiteQuality
SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 5.641e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.17e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66620
num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.940993788819876e-4
allele num: 10304
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

MQRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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FS
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
SIO_000300: 6.909999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.411e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.50073536032656e-5
allele num: 66634
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.171e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e0

MQRankSum
type: SiteQuality
SIO_000300: 4.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
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VQSLOD
type: SiteQuality
SIO_000300: 4.98e-1

BaseQRankSum
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SIO_000300: -2.6e0

FS
type: SiteQuality
SIO_000300: 7.48e-1

DP
type: SiteQuality
SIO_000300: 1.733186e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500600240096038e-5
allele num: 66640
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.733646e6

QD
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
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MQRankSum
type: SiteQuality
SIO_000300: -2.1e-2

BaseQRankSum
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.64e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.36e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.502341217433065e-5
allele num: 66632
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e-1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.945e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.74e0

QD
type: SiteQuality
SIO_000300: 1.446e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.516530178950561e-4
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66142
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.238e0

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 1.002204850671477e-4
allele num: 9978
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.524715640533041e-5
allele num: 65586
num of homozygotes: 0

Other
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South Asian
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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FS
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ReadPosRankSum
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MQRankSum
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 4.595447443399406e-5
allele num: 65282
num of homozygotes: 0

African
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Other
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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QD
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MQRankSum
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ReadPosRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 64976
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East Asian
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Other
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South Asian
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European (Finnish)
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DP
type: SiteQuality
SIO_000300: 1.632431e6

BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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QD
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FS
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MQRankSum
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1509
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6081
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 948
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.86053517632465e-5
allele num: 11286
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63936
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.226e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

DP
type: SiteQuality
SIO_000300: 1.554417e6

VQSLOD
type: SiteQuality
SIO_000300: 5.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.77e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.033e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.29e0

GenotypeQuality
all individuals: 474
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1660
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7844
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.525087692542321e-4
allele num: 13114
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11232
num of homozygotes: 0

African
type: Population
allele count: 14
allele frequency: 1.453488372093023e-3
allele num: 9632
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.633e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.1e-2

FS
type: SiteQuality
SIO_000300: 2.236e0

MQRankSum
type: SiteQuality
SIO_000300: 3.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

DP
type: SiteQuality
SIO_000300: 1.513907e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.8e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

GenotypeQuality
all individuals: 370
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2475
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 504
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variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8166
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.572821642025794e-4
allele num: 12716
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62788
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11144
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.881e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.53e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.404975e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-2

QD
type: SiteQuality
SIO_000300: 1.508e1

GenotypeQuality
all individuals: 9574
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1455
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4933
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.915149596327371e-5
allele num: 12634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11150
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8148
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.29e-1

QD
type: SiteQuality
SIO_000300: 1.203e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.329e0

DP
type: SiteQuality
SIO_000300: 1.388429e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 7.09e-1

GenotypeQuality
all individuals: 4596
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1376
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 385
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variant carriers: 0

GenotypeQuality
all individuals: 9729
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variant carriers: 0

GenotypeQuality
all individuals: 1133
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 409
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variant carriers: 0

GenotypeQuality
all individuals: 1041
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2474
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variant carriers: 1

GenotypeQuality
all individuals: 5467
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.604518323599255e-5
allele num: 62324
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8066
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11110
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9460
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.658e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.56e-1

DP
type: SiteQuality
SIO_000300: 1.340645e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.06e0

QD
type: SiteQuality
SIO_000300: 1.22e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.17e-1

FS
type: SiteQuality
SIO_000300: 8.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

GenotypeQuality
all individuals: 1239
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9729
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
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variant carriers: 0

GenotypeQuality
all individuals: 1009
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3283
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2474
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1133
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1041
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3984
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5467
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11110
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8066
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.813554970797766e-5
allele num: 62324
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12340
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e-1

DP
type: SiteQuality
SIO_000300: 1.340645e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.17e-1

MQ
type: SiteQuality
SIO_000300: 5.658e1

FS
type: SiteQuality
SIO_000300: 8.99e-1

QD
type: SiteQuality
SIO_000300: 1.22e1

GenotypeQuality
all individuals: 96
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2472
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4884
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3970
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 498
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variant carriers: 0

GenotypeQuality
all individuals: 1534
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12204
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11092
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.245640259093174e-4
allele num: 8028
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62104
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.839e1

VQSLOD
type: SiteQuality
SIO_000300: -1.809e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.33e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

QD
type: SiteQuality
SIO_000300: 1.371e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.89e-1

DP
type: SiteQuality
SIO_000300: 1.303239e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.33e-1

GenotypeQuality
all individuals: 6598
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2520
bin: 9.75e1
variant carriers: 55

GenotypeQuality
all individuals: 3801
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 497
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 929
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 3306
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3125
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 55
allele frequency: 5.924170616113744e-3
allele num: 9284
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.632226683641824e-5
allele num: 61266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.724795640326976e-4
allele num: 11010
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11812
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.231157e6

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.42e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e-1

QD
type: SiteQuality
SIO_000300: 1.528e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 1080
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 495
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GenotypeQuality
all individuals: 844
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3285
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6584
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
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GenotypeQuality
all individuals: 992
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3800
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7060
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11002
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11776
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.633026324384349e-5
allele num: 61236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e-1

FS
type: SiteQuality
SIO_000300: 7.062e0

MQ
type: SiteQuality
SIO_000300: 5.922e1

MQRankSum
type: SiteQuality
SIO_000300: 2.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 8.95e-1

DP
type: SiteQuality
SIO_000300: 1.229814e6

QD
type: SiteQuality
SIO_000300: 1.282e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.8e-2

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3081
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11969
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11646
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9258
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10980
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.640527593674126e-5
allele num: 60956
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

MQRankSum
type: SiteQuality
SIO_000300: -1.927e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQ
type: SiteQuality
SIO_000300: 6.067e1

QD
type: SiteQuality
SIO_000300: 1.384e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.28e-1

DP
type: SiteQuality
SIO_000300: 1.213621e6

GenotypeQuality
all individuals: 4139
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7112
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1254
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.276487107480215e-4
allele num: 7834
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9198
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10922
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.18e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

FS
type: SiteQuality
SIO_000300: 2.747e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -8.999999999999999e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

DP
type: SiteQuality
SIO_000300: 1.206789e6

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

GenotypeQuality
all individuals: 1660
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4479
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10561
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
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variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7830
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.165902841429881e-5
allele num: 10910
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6426
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9180
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11352
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.06e-1

DP
type: SiteQuality
SIO_000300: 1.200905e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -7.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.363e0

QD
type: SiteQuality
SIO_000300: 1.566e1

GenotypeQuality
all individuals: 822
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1119
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5638
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 893
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7768
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9140
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10874
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.679049830326844e-4
allele num: 11198
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

QD
type: SiteQuality
SIO_000300: 2.092e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.99e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.184357e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.69e-1

GenotypeQuality
all individuals: 5611
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2818
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variant carriers: 0

GenotypeQuality
all individuals: 8031
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8296
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variant carriers: 0

GenotypeQuality
all individuals: 1194
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 491
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variant carriers: 0

GenotypeQuality
all individuals: 2466
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3606
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11230
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7778
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.337783711615487e-5
allele num: 59920
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.184127e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e0

FS
type: SiteQuality
SIO_000300: 3.153e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.97e-1

QD
type: SiteQuality
SIO_000300: 1.472e1

VQSLOD
type: SiteQuality
SIO_000300: 7.84e-1

GenotypeQuality
all individuals: 1451
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 890
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6809
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2429
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1701
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.786032689450223e-4
allele num: 10768
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 36
allele frequency: 6.098593935287142e-4
allele num: 59030
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11032
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.317116320212296e-4
allele num: 9044
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7662
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.24e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.45e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.179486e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.177e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.04e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2503
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2429
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4779
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variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7662
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6366
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10768
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59030
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.317116320212296e-4
allele num: 9044
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11032
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.04e-1

DP
type: SiteQuality
SIO_000300: 1.179486e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.45e0

VQSLOD
type: SiteQuality
SIO_000300: 5.24e0

QD
type: SiteQuality
SIO_000300: 1.177e1

MQRankSum
type: SiteQuality
SIO_000300: 3.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.08e-1