22-31924666-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924666
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924666
    reference: chr 22
allele count: 3
allele frequency: 2.516862981979261e-5
allele num: 119196
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.93-10C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.93-10C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.219-10C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.178-10C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18181C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18181C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18181C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18181C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.93-10C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.93-10C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.93-10C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.93-10C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185721
  ensembl protein: ENSP00000448252
  ensembl transcript: ENST00000548143
  gene symbol: DRG1
  hgvsc: ENST00000548143.1:c.*119-10C>G
  variant of: http://identifiers.org/hgnc/3029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.383-10C>G
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11571
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7105
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9837
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

22-31924675-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924675
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924675
    reference: chr 22
allele count: 3
allele frequency: 2.50434085748631e-5
allele num: 119792
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.93-1G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185721
  ensembl protein: ENSP00000448252
  ensembl transcript: ENST00000548143
  gene symbol: DRG1
  hgvsc: ENST00000548143.1:c.*119-1G>A
  variant of: http://identifiers.org/hgnc/3029
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.93-1G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.93-1G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.383-1G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.178-1G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.93-1G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18172G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.93-1G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.93-1G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.219-1G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18172G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18172G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18172G>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10062
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9320
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.93-1G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD

22-31924678-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924678
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924678
    reference: chr 22
allele count: 1
allele frequency: 8.337224037884346e-6
allele num: 119944
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18169A>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.95A>T
  hgvsp: ENSP00000402679.1:p.Tyr32Phe
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.221A>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.95A>T
  hgvsp: ENSP00000443025.1:p.Tyr32Phe
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185721
  ensembl protein: ENSP00000448252
  ensembl transcript: ENST00000548143
  gene symbol: DRG1
  hgvsc: ENST00000548143.1:c.*121A>T
  variant of: http://identifiers.org/hgnc/3029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.95A>T
  hgvsp: ENSP00000430488.1:p.Tyr32Phe
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.385A>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18169A>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.95A>T
  hgvsp: ENSP00000411793.1:p.Tyr32Phe
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18169A>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.95A>T
  hgvsp: ENSP00000383145.2:p.Tyr32Phe
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.95A>T
  hgvsp: ENSP00000391339.1:p.Tyr32Phe
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.180A>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18169A>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr32Phe
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD

22-31924685-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924685
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924685
    reference: chr 22
allele count: 1
allele frequency: 8.316423272678886e-6
allele num: 120244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.187G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.102G>A
  hgvsp: ENST00000540643.1:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.102G>A
  hgvsp: ENST00000400288.2:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18162G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.228G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.102G>A
  hgvsp: ENST00000432498.1:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18162G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185721
  ensembl protein: ENSP00000448252
  ensembl transcript: ENST00000548143
  gene symbol: DRG1
  hgvsc: ENST00000548143.1:c.*128G>A
  variant of: http://identifiers.org/hgnc/3029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.102G>A
  hgvsp: ENST00000444859.1:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.102G>A
  hgvsp: ENST00000411518.1:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.102G>A
  hgvsp: ENST00000524296.1:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.392G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18162G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18162G>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7105
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11598
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9568
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9842
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10182
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys34Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff

22-31924690-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924690
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924690
    reference: chr 22
allele count: 1
allele frequency: 8.304682179812978e-6
allele num: 120414
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.397G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.107G>T
  hgvsp: ENSP00000443025.1:p.Gly36Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18157G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.107G>T
  hgvsp: ENSP00000383145.2:p.Gly36Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.107G>T
  hgvsp: ENSP00000391339.1:p.Gly36Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.233G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.107G>T
  hgvsp: ENSP00000402679.1:p.Gly36Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.192G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185721
  ensembl protein: ENSP00000448252
  ensembl transcript: ENST00000548143
  gene symbol: DRG1
  hgvsc: ENST00000548143.1:c.*133G>T
  variant of: http://identifiers.org/hgnc/3029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18157G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.107G>T
  hgvsp: ENSP00000430488.1:p.Gly36Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.107G>T
  hgvsp: ENSP00000411793.1:p.Gly36Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18157G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18157G>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9840
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10241
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9629
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly36Val
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum

22-31924701-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924701
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924701
    reference: chr 22
allele count: 1
allele frequency: 8.29242404139578e-6
allele num: 120592
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.118A>G
  hgvsp: ENSP00000402679.1:p.Lys40Glu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.118A>G
  hgvsp: ENSP00000430488.1:p.Lys40Glu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18146A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.118A>G
  hgvsp: ENSP00000411793.1:p.Lys40Glu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.408A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.118A>G
  hgvsp: ENSP00000391339.1:p.Lys40Glu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.118A>G
  hgvsp: ENSP00000383145.2:p.Lys40Glu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18146A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185721
  ensembl protein: ENSP00000448252
  ensembl transcript: ENST00000548143
  gene symbol: DRG1
  hgvsc: ENST00000548143.1:c.*144A>G
  variant of: http://identifiers.org/hgnc/3029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18146A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.244A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.203A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.118A>G
  hgvsp: ENSP00000443025.1:p.Lys40Glu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18146A>G
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9841
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7105
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10344
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11614
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys40Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/22-31924708-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924708
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924708
    reference: chr 22
allele count: 1
allele frequency: 8.288712431410904e-6
allele num: 120646
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18139A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.125A>C
  hgvsp: ENSP00000443025.1:p.Tyr42Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.125A>C
  hgvsp: ENSP00000411793.1:p.Tyr42Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.125A>C
  hgvsp: ENSP00000430488.1:p.Tyr42Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.125A>C
  hgvsp: ENSP00000402679.1:p.Tyr42Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185721
  ensembl protein: ENSP00000448252
  ensembl transcript: ENST00000548143
  gene symbol: DRG1
  hgvsc: ENST00000548143.1:c.*151A>C
  variant of: http://identifiers.org/hgnc/3029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.415A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18139A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.210A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.125A>C
  hgvsp: ENSP00000391339.1:p.Tyr42Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.251A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.125A>C
  hgvsp: ENSP00000383145.2:p.Tyr42Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18139A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18139A>C
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11623
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10368
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr42Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

22-31924712-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924712
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924712
    reference: chr 22
allele count: 2
allele frequency: 1.657302905251993e-5
allele num: 120678
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.129T>C
  hgvsp: ENST00000400288.2:c.129T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.129T>C
  hgvsp: ENST00000432498.1:c.129T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.255T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.129T>C
  hgvsp: ENST00000411518.1:c.129T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000185721
  ensembl protein: ENSP00000448252
  ensembl transcript: ENST00000548143
  gene symbol: DRG1
  hgvsc: ENST00000548143.1:c.*155T>C
  variant of: http://identifiers.org/hgnc/3029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.129T>C
  hgvsp: ENST00000540643.1:c.129T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.419T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18135T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.129T>C
  hgvsp: ENST00000524296.1:c.129T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18135T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.129T>C
  hgvsp: ENST00000444859.1:c.129T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18135T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18135T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.214T>C
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11635
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9843
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser43Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP

22-31924727-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924727
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924727
    reference: chr 22
allele count: 1
allele frequency: 8.28225940036442e-6
allele num: 120740
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18120C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.144C>T
  hgvsp: ENST00000524296.1:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.144C>T
  hgvsp: ENST00000444859.1:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18120C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.144C>T
  hgvsp: ENST00000540643.1:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.229C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18120C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.144C>T
  hgvsp: ENST00000411518.1:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18120C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.270C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.144C>T
  hgvsp: ENST00000432498.1:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.144C>T
  hgvsp: ENST00000400288.2:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.434C>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4225
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7107
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9671
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10408
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser48Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ

22-31924729-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924729
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924729
    reference: chr 22
allele count: 154
allele frequency: 1.275425694030345e-3
allele num: 120744
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.146A>G
  hgvsp: ENSP00000430488.1:p.Asn49Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.146A>G
  hgvsp: ENSP00000383145.2:p.Asn49Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18118A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.436A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.146A>G
  hgvsp: ENSP00000443025.1:p.Asn49Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.146A>G
  hgvsp: ENSP00000402679.1:p.Asn49Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18118A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.231A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18118A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.146A>G
  hgvsp: ENSP00000411793.1:p.Asn49Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.146A>G
  hgvsp: ENSP00000391339.1:p.Asn49Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18118A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.272A>G
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 9646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 4216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 7.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9826
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.75e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn49Ser
num of homozygotes: 1
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/22-31924741-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924741
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924741
    reference: chr 22
allele count: 45
allele frequency: 3.726461186836483e-4
allele num: 120758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.158C>A
  hgvsp: ENSP00000411793.1:p.Ser53Tyr
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.158C>A
  hgvsp: ENSP00000383145.2:p.Ser53Tyr
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.243C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18106C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.11C>A
  hgvsp: ENSP00000389364.1:p.Ser4Tyr
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.158C>A
  hgvsp: ENSP00000391339.1:p.Ser53Tyr
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18106C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.158C>A
  hgvsp: ENSP00000430488.1:p.Ser53Tyr
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.158C>A
  hgvsp: ENSP00000402679.1:p.Ser53Tyr
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18106C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.158C>A
  hgvsp: ENSP00000443025.1:p.Ser53Tyr
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18106C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.284C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.448C>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11621
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7109
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 9.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser53Tyr
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD

22-31924743-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924743
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924743
    reference: chr 22
allele count: 2
allele frequency: 1.656204971927326e-5
allele num: 120758
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.160G>T
  hgvsp: ENSP00000411793.1:p.Ala54Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.245G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.160G>T
  hgvsp: ENSP00000443025.1:p.Ala54Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18104G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.160G>T
  hgvsp: ENSP00000383145.2:p.Ala54Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.286G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.13G>T
  hgvsp: ENSP00000389364.1:p.Ala5Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.160G>T
  hgvsp: ENSP00000391339.1:p.Ala54Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.160G>T
  hgvsp: ENSP00000402679.1:p.Ala54Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.450G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18104G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18104G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.160G>T
  hgvsp: ENSP00000430488.1:p.Ala54Ser
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18104G>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7117
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10403
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala54Ser
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/22-31924748-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924748
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924748
    reference: chr 22
allele count: 3
allele frequency: 2.484307457890989e-5
allele num: 120758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.250C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.165C>A
  hgvsp: ENST00000540643.1:c.165C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.165C>A
  hgvsp: ENST00000444859.1:c.165C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18099C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18099C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18099C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.165C>A
  hgvsp: ENST00000400288.2:c.165C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.165C>A
  hgvsp: ENST00000432498.1:c.165C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.165C>A
  hgvsp: ENST00000411518.1:c.165C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.291C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.165C>A
  hgvsp: ENST00000524296.1:c.165C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18099C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.18C>A
  hgvsp: ENST00000450787.1:c.18C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.455C>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9649
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7117
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser55Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP

22-31924758-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924758
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924758
    reference: chr 22
allele count: 3
allele frequency: 2.484348603796085e-5
allele num: 120756
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18089C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18089C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.301C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18089C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.260C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.175C>T
  hgvsp: ENSP00000443025.1:p.Arg59Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.175C>T
  hgvsp: ENSP00000383145.2:p.Arg59Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.28C>T
  hgvsp: ENSP00000389364.1:p.Arg10Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.175C>T
  hgvsp: ENSP00000411793.1:p.Arg59Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.175C>T
  hgvsp: ENSP00000430488.1:p.Arg59Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.175C>T
  hgvsp: ENSP00000402679.1:p.Arg59Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18089C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.175C>T
  hgvsp: ENSP00000391339.1:p.Arg59Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.465C>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9843
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4248
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg59Trp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

22-31924759-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924759
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924759
    reference: chr 22
allele count: 3
allele frequency: 2.484307457890989e-5
allele num: 120758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.466G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.176G>A
  hgvsp: ENSP00000391339.1:p.Arg59Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.176G>A
  hgvsp: ENSP00000411793.1:p.Arg59Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18088G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18088G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.176G>A
  hgvsp: ENSP00000383145.2:p.Arg59Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.176G>A
  hgvsp: ENSP00000443025.1:p.Arg59Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.176G>A
  hgvsp: ENSP00000430488.1:p.Arg59Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.302G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.176G>A
  hgvsp: ENSP00000402679.1:p.Arg59Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.29G>A
  hgvsp: ENSP00000389364.1:p.Arg10Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.261G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18088G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18088G>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10408
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9842
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg59Gln
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

22-31924759-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924759
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924759
    reference: chr 22
allele count: 2
allele frequency: 1.656204971927326e-5
allele num: 120758
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.176G>C
  hgvsp: ENSP00000430488.1:p.Arg59Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.176G>C
  hgvsp: ENSP00000391339.1:p.Arg59Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.176G>C
  hgvsp: ENSP00000411793.1:p.Arg59Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18088G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.29G>C
  hgvsp: ENSP00000389364.1:p.Arg10Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.176G>C
  hgvsp: ENSP00000383145.2:p.Arg59Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18088G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18088G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.466G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.261G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.302G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.176G>C
  hgvsp: ENSP00000402679.1:p.Arg59Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.176G>C
  hgvsp: ENSP00000443025.1:p.Arg59Pro
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18088G>C
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4248
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9842
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg59Pro
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

22-31924759-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924759
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924759
    reference: chr 22
allele count: 1
allele frequency: 8.281024859636628e-6
allele num: 120758
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18088G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.466G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.176G>T
  hgvsp: ENSP00000402679.1:p.Arg59Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.29G>T
  hgvsp: ENSP00000389364.1:p.Arg10Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18088G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.261G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.176G>T
  hgvsp: ENSP00000391339.1:p.Arg59Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.176G>T
  hgvsp: ENSP00000443025.1:p.Arg59Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.176G>T
  hgvsp: ENSP00000430488.1:p.Arg59Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18088G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.176G>T
  hgvsp: ENSP00000411793.1:p.Arg59Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.176G>T
  hgvsp: ENSP00000383145.2:p.Arg59Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18088G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.302G>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10408
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9842
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg59Leu
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD

22-31924767-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924767
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924767
    reference: chr 22
allele count: 1
allele frequency: 8.281162012653616e-6
allele num: 120756
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.269T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.184T>C
  hgvsp: ENST00000540643.1:c.184T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.184T>C
  hgvsp: ENST00000432498.1:c.184T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18080T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.474T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.184T>C
  hgvsp: ENST00000444859.1:c.184T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18080T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.37T>C
  hgvsp: ENST00000450787.1:c.37T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.184T>C
  hgvsp: ENST00000411518.1:c.184T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.184T>C
  hgvsp: ENST00000524296.1:c.184T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18080T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.184T>C
  hgvsp: ENST00000400288.2:c.184T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18080T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.310T>C
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9844
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10411
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu62Leu
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

22-31924774-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924774
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924774
    reference: chr 22
allele count: 2
allele frequency: 1.656259834042764e-5
allele num: 120754
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18073G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.481G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18073G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.191G>T
  hgvsp: ENSP00000430488.1:p.Ser64Ile
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18073G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.191G>T
  hgvsp: ENSP00000443025.1:p.Ser64Ile
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.191G>T
  hgvsp: ENSP00000383145.2:p.Ser64Ile
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18073G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.44G>T
  hgvsp: ENSP00000389364.1:p.Ser15Ile
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.317G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.191G>T
  hgvsp: ENSP00000391339.1:p.Ser64Ile
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.191G>T
  hgvsp: ENSP00000402679.1:p.Ser64Ile
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.276G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.191G>T
  hgvsp: ENSP00000411793.1:p.Ser64Ile
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9844
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser64Ile
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

22-31924781-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924781
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924781
    reference: chr 22
allele count: 1
allele frequency: 8.281299170213822e-6
allele num: 120754
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.198T>C
  hgvsp: ENST00000400288.2:c.198T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.198T>C
  hgvsp: ENST00000540643.1:c.198T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18066T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18066T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.198T>C
  hgvsp: ENST00000444859.1:c.198T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.198T>C
  hgvsp: ENST00000432498.1:c.198T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.51T>C
  hgvsp: ENST00000450787.1:c.51T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.198T>C
  hgvsp: ENST00000411518.1:c.198T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.324T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.488T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.198T>C
  hgvsp: ENST00000524296.1:c.198T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18066T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.283T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18066T>C
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9844
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser66Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS

22-31924791-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924791
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924791
    reference: chr 22
allele count: 1
allele frequency: 8.281573498964803e-6
allele num: 120750
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.208C>T
  hgvsp: ENSP00000430488.1:p.Gln70Ter
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18056C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.208C>T
  hgvsp: ENSP00000402679.1:p.Gln70Ter
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.498C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.61C>T
  hgvsp: ENSP00000389364.1:p.Gln21Ter
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18056C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.293C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.208C>T
  hgvsp: ENSP00000383145.2:p.Gln70Ter
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.208C>T
  hgvsp: ENSP00000411793.1:p.Gln70Ter
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.208C>T
  hgvsp: ENSP00000443025.1:p.Gln70Ter
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.208C>T
  hgvsp: ENSP00000391339.1:p.Gln70Ter
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18056C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.334C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18056C>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10411
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7115
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln70Ter
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

22-31924797-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924797
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924797
    reference: chr 22
allele count: 4
allele frequency: 3.312629399585921e-5
allele num: 120750
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.299C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.214C>T
  hgvsp: ENSP00000443025.1:p.Arg72Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.340C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.504C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.214C>T
  hgvsp: ENSP00000391339.1:p.Arg72Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.214C>T
  hgvsp: ENSP00000383145.2:p.Arg72Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.67C>T
  hgvsp: ENSP00000389364.1:p.Arg23Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.214C>T
  hgvsp: ENSP00000402679.1:p.Arg72Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18050C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.214C>T
  hgvsp: ENSP00000411793.1:p.Arg72Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18050C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18050C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18050C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.214C>T
  hgvsp: ENSP00000430488.1:p.Arg72Cys
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9845
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4246
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg72Cys
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

22-31924798-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924798
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924798
    reference: chr 22
allele count: 434
allele frequency: 3.59444103957198e-3
allele num: 120742
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18049G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.68G>A
  hgvsp: ENSP00000389364.1:p.Arg23His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.215G>A
  hgvsp: ENSP00000402679.1:p.Arg72His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18049G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.215G>A
  hgvsp: ENSP00000430488.1:p.Arg72His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18049G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.215G>A
  hgvsp: ENSP00000383145.2:p.Arg72His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.215G>A
  hgvsp: ENSP00000391339.1:p.Arg72His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.215G>A
  hgvsp: ENSP00000443025.1:p.Arg72His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.341G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.300G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.505G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18049G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.215G>A
  hgvsp: ENSP00000411793.1:p.Arg72His
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 7.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 11563
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 6.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 8.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9585
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10369
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4211
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7076
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg72His
num of homozygotes: 13
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

22-31924798-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924798
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924798
    reference: chr 22
allele count: 1
allele frequency: 8.282122210995345e-6
allele num: 120742
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.505G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.215G>T
  hgvsp: ENSP00000443025.1:p.Arg72Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18049G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18049G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.341G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.68G>T
  hgvsp: ENSP00000389364.1:p.Arg23Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.300G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.215G>T
  hgvsp: ENSP00000402679.1:p.Arg72Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.215G>T
  hgvsp: ENSP00000383145.2:p.Arg72Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18049G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.215G>T
  hgvsp: ENSP00000391339.1:p.Arg72Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.215G>T
  hgvsp: ENSP00000430488.1:p.Arg72Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18049G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.215G>T
  hgvsp: ENSP00000411793.1:p.Arg72Leu
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11563
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9585
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg72Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

22-31924804-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924804
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924804
    reference: chr 22
allele count: 15
allele frequency: 1.242277176883706e-4
allele num: 120746
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18043C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.221C>T
  hgvsp: ENSP00000411793.1:p.Thr74Ile
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.74C>T
  hgvsp: ENSP00000389364.1:p.Thr25Ile
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.306C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.221C>T
  hgvsp: ENSP00000443025.1:p.Thr74Ile
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.221C>T
  hgvsp: ENSP00000391339.1:p.Thr74Ile
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18043C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.221C>T
  hgvsp: ENSP00000383145.2:p.Thr74Ile
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18043C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.347C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.221C>T
  hgvsp: ENSP00000430488.1:p.Thr74Ile
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.221C>T
  hgvsp: ENSP00000402679.1:p.Thr74Ile
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18043C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.511C>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10411
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 9585
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9847
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr74Ile
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

22-31924818-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924818
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924818
    reference: chr 22
allele count: 3
allele frequency: 2.485377694563651e-5
allele num: 120706
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.525C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18029C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.235C>G
  hgvsp: ENSP00000391339.1:p.Arg79Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.235C>G
  hgvsp: ENSP00000430488.1:p.Arg79Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.88C>G
  hgvsp: ENSP00000389364.1:p.Arg30Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.235C>G
  hgvsp: ENSP00000443025.1:p.Arg79Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18029C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.235C>G
  hgvsp: ENSP00000411793.1:p.Arg79Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.235C>G
  hgvsp: ENSP00000383145.2:p.Arg79Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18029C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.320C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.361C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.13C>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.235C>G
  hgvsp: ENSP00000402679.1:p.Arg79Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18029C>G
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9491
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg79Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff

22-31924818-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924818
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924818
    reference: chr 22
allele count: 125
allele frequency: 1.035574039401521e-3
allele num: 120706
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18029C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.235C>T
  hgvsp: ENSP00000430488.1:p.Arg79Ter
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.320C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.88C>T
  hgvsp: ENSP00000389364.1:p.Arg30Ter
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.235C>T
  hgvsp: ENSP00000383145.2:p.Arg79Ter
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.235C>T
  hgvsp: ENSP00000411793.1:p.Arg79Ter
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.13C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.525C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.361C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.235C>T
  hgvsp: ENSP00000402679.1:p.Arg79Ter
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18029C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18029C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.235C>T
  hgvsp: ENSP00000443025.1:p.Arg79Ter
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18029C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.235C>T
  hgvsp: ENSP00000391339.1:p.Arg79Ter
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11626
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 9.75e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg79Ter
num of homozygotes: 1
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

22-31924819-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924819
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924819
    reference: chr 22
allele count: 1
allele frequency: 8.284455048546906e-6
allele num: 120708
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18028G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18028G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.236G>A
  hgvsp: ENSP00000443025.1:p.Arg79Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.236G>A
  hgvsp: ENSP00000430488.1:p.Arg79Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.14G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.321G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.236G>A
  hgvsp: ENSP00000391339.1:p.Arg79Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000411793
  ensembl transcript: ENST00000444859
  gene symbol: SFI1
  hgvsc: ENST00000444859.1:c.236G>A
  hgvsp: ENSP00000411793.1:p.Arg79Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.236G>A
  hgvsp: ENSP00000383145.2:p.Arg79Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18028G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.362G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.526G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.236G>A
  hgvsp: ENSP00000402679.1:p.Arg79Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.89G>A
  hgvsp: ENSP00000389364.1:p.Arg30Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18028G>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10406
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9845
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg79Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

22-31924825-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924825
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924825
    reference: chr 22
allele count: 1
allele frequency: 8.287063893262618e-6
allele num: 120670
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18022G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.242G>C
  hgvsp: ENSP00000443025.1:p.Gly81Ala
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.242G>C
  hgvsp: ENSP00000391339.1:p.Gly81Ala
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18022G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18022G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.327G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.242G>C
  hgvsp: ENSP00000402679.1:p.Gly81Ala
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.242G>C
  hgvsp: ENSP00000383145.2:p.Gly81Ala
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.95G>C
  hgvsp: ENSP00000389364.1:p.Gly32Ala
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.242G>C
  hgvsp: ENSP00000430488.1:p.Gly81Ala
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18022G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.20G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.532G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.368G>C
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9848
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11631
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly81Ala
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

22-31924827-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924827
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924827
    reference: chr 22
allele count: 1
allele frequency: 8.288162845823595e-6
allele num: 120654
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.244C>T
  hgvsp: ENSP00000430488.1:p.Arg82Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.329C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.244C>T
  hgvsp: ENSP00000391339.1:p.Arg82Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18020C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.244C>T
  hgvsp: ENSP00000402679.1:p.Arg82Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.97C>T
  hgvsp: ENSP00000389364.1:p.Arg33Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.244C>T
  hgvsp: ENSP00000443025.1:p.Arg82Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18020C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18020C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.22C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.534C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18020C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.244C>T
  hgvsp: ENSP00000383145.2:p.Arg82Trp
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.370C>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9428
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11636
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg82Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

22-31924828-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924828
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924828
    reference: chr 22
allele count: 1
allele frequency: 8.288712431410904e-6
allele num: 120646
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.23G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.98G>A
  hgvsp: ENSP00000389364.1:p.Arg33Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.245G>A
  hgvsp: ENSP00000430488.1:p.Arg82Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.535G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.330G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18019G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.245G>A
  hgvsp: ENSP00000383145.2:p.Arg82Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.371G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.245G>A
  hgvsp: ENSP00000391339.1:p.Arg82Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.245G>A
  hgvsp: ENSP00000443025.1:p.Arg82Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.245G>A
  hgvsp: ENSP00000402679.1:p.Arg82Gln
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18019G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18019G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18019G>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9846
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg82Gln
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum

22-31924829-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924829
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924829
    reference: chr 22
allele count: 1
allele frequency: 8.288849839196314e-6
allele num: 120644
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18018G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.246G>C
  hgvsp: ENST00000400288.2:c.246G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.246G>C
  hgvsp: ENST00000432498.1:c.246G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.24G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.246G>C
  hgvsp: ENST00000411518.1:c.246G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18018G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.246G>C
  hgvsp: ENST00000540643.1:c.246G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.246G>C
  hgvsp: ENST00000524296.1:c.246G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.331G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.536G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18018G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.99G>C
  hgvsp: ENST00000450787.1:c.99G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18018G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.372G>C
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11625
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg82Arg
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ

22-31924842-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924842
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924842
    reference: chr 22
allele count: 9
allele frequency: 7.471111701421171e-5
allele num: 120464
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.259C>T
  hgvsp: ENSP00000443025.1:p.Arg87Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.112C>T
  hgvsp: ENSP00000389364.1:p.Arg38Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.259C>T
  hgvsp: ENSP00000391339.1:p.Arg87Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18005C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.37C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.344C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.549C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18005C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.259C>T
  hgvsp: ENSP00000430488.1:p.Arg87Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.259C>T
  hgvsp: ENSP00000383145.2:p.Arg87Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.259C>T
  hgvsp: ENSP00000402679.1:p.Arg87Cys
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18005C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.385C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18005C>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9845
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Arg87Cys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

22-31924843-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924843
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924843
    reference: chr 22
allele count: 3
allele frequency: 2.490618669677548e-5
allele num: 120452
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.260G>A
  hgvsp: ENSP00000383145.2:p.Arg87His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.386G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.260G>A
  hgvsp: ENSP00000402679.1:p.Arg87His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.260G>A
  hgvsp: ENSP00000391339.1:p.Arg87His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18004G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.113G>A
  hgvsp: ENSP00000389364.1:p.Arg38His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.38G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.260G>A
  hgvsp: ENSP00000430488.1:p.Arg87His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18004G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.550G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.260G>A
  hgvsp: ENSP00000443025.1:p.Arg87His
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.345G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18004G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18004G>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9847
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg87His
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP

22-31924843-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924843
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924843
    reference: chr 22
allele count: 10
allele frequency: 8.302062232258493e-5
allele num: 120452
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18004G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.260G>T
  hgvsp: ENSP00000383145.2:p.Arg87Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.38G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.260G>T
  hgvsp: ENSP00000443025.1:p.Arg87Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.113G>T
  hgvsp: ENSP00000389364.1:p.Arg38Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.345G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.260G>T
  hgvsp: ENSP00000402679.1:p.Arg87Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.260G>T
  hgvsp: ENSP00000430488.1:p.Arg87Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.260G>T
  hgvsp: ENSP00000391339.1:p.Arg87Leu
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18004G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18004G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18004G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.550G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.386G>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9847
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg87Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP

22-31924845-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924845
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924845
    reference: chr 22
allele count: 1
allele frequency: 8.302889405513118e-6
allele num: 120440
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-18002A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.388A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.262A>G
  hgvsp: ENSP00000383145.2:p.Ile88Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.262A>G
  hgvsp: ENSP00000402679.1:p.Ile88Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.262A>G
  hgvsp: ENSP00000443025.1:p.Ile88Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-18002A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465437
  gene symbol: SFI1
  hgvsc: ENST00000465437.1:n.552A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.347A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-18002A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.115A>G
  hgvsp: ENSP00000389364.1:p.Ile39Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-18002A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.262A>G
  hgvsp: ENSP00000391339.1:p.Ile88Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.262A>G
  hgvsp: ENSP00000430488.1:p.Ile88Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.40A>G
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9128
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10326
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile88Val
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ

22-31924853-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924853
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924853
    reference: chr 22
allele count: 2
allele frequency: 1.662538030557449e-5
allele num: 120298
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-17994A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.266+4A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.396A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.266+4A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-17994A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+4A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-17994A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.266+4A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.351+4A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-17994A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.119+4A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.44+4A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.266+4A>G
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11586
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10247
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8861
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9846
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.266+4A>G
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

22-31924854-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924854
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924854
    reference: chr 22
allele count: 1
allele frequency: 8.316284949187499e-6
allele num: 120246
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.266+5G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.266+5G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.266+5G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.119+5G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.266+5G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-17993G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+5G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.44+5G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-17993G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-17993G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.351+5G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.397G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-17993G>C
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11586
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8756
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.266+5G>C
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

22-31924855-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924855
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924855
    reference: chr 22
allele count: 1
allele frequency: 8.318221896887321e-6
allele num: 120218
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.266+6C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-17992C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.398C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.351+6C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.44+6C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+6C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.266+6C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-17992C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.266+6C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.266+6C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.119+6C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-17992C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-17992C>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11608
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8724
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.266+6C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/22-31924868-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924868
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924868
    reference: chr 22
allele count: 1
allele frequency: 8.339866228545694e-6
allele num: 119906
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.119+19A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-17979A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.266+19A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+19A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-17979A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.351+19A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.411A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.266+19A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.266+19A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.266+19A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-17979A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-17979A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.44+19A>C
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4253
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10001
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/22-31924869-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924869
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924869
    reference: chr 22
allele count: 1
allele frequency: 8.342649291709075e-6
allele num: 119866
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.266+20C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.119+20C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.351+20C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.266+20C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.266+20C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-17978C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.266+20C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-17978C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.44+20C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.412C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-17978C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+20C>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-17978C>A
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7719
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9960
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

22-31924876-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924876
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924876
    reference: chr 22
allele count: 2
allele frequency: 1.669783596045953e-5
allele num: 119776
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.44+27A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+27A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.266+27A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.351+27A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.266+27A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-17971A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.119+27A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.419A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-17971A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.266+27A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.266+27A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-17971A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-17971A>G
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7117
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4252
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2097
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

22-31924879-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924879
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924879
    reference: chr 22
allele count: 4
allele frequency: 3.342748742290786e-5
allele num: 119662
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.422G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-17968G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-17968G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.44+30G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-17968G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.266+30G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.266+30G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.119+30G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.266+30G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.266+30G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+30G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.351+30G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-17968G>A
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7114
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6824
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11445
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

22-31924880-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924880
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924880
    reference: chr 22
allele count: 1
allele frequency: 8.356732183446986e-6
allele num: 119664
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.266+31G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-17967G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+31G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-17967G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.423G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.44+31G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-17967G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.266+31G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.119+31G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.266+31G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-17967G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.266+31G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.351+31G>A
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9812
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9494
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7113
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6739
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

22-31924895-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924895
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924895
    reference: chr 22
allele count: 1
allele frequency: 8.404915194405689e-6
allele num: 118978
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.266+46T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+46T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.44+46T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.266+46T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-17952T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-17952T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-17952T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-17952T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.119+46T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.438T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.266+46T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.351+46T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.266+46T>A
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11022
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8781
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9719
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7089
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

22-31924895-TCTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924895
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924892
    reference: chr 22
allele count: 1
allele frequency: 8.404915194405689e-6
allele num: 118978
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.266+49_266+51delCCT
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.441_443delCCT
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.266+49_266+51delCCT
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.44+49_44+51delCCT
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.266+49_266+51delCCT
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.119+49_119+51delCCT
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+49_266+51delCCT
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-17949_93-17947delCCT
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.351+49_351+51delCCT
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-17949_93-17947delCCT
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-17949_93-17947delCCT
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.266+49_266+51delCCT
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-17949_93-17947delCCT
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8781
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11022
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9719
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2637
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: TCTC
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

22-31924901-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31924901
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31924901
    reference: chr 22
allele count: 5
allele frequency: 4.215709419581127e-5
allele num: 118604
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.266+52T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.266+52T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.266+52T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+52T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000465646
  gene symbol: SFI1
  hgvsc: ENST00000465646.1:n.444T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-17946T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.266+52T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.44+52T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-17946T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.119+52T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-17946T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-17946T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.351+52T>G
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6026
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10996
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7092
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9181
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4248
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP

22-31926539-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31926539
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31926539
    reference: chr 22
allele count: 1
allele frequency: 7.135721421435707e-5
allele num: 14014
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.120-505G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.45-505G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.267-39G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-16308G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-16308G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.267-505G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.267-505G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+1690G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-16308G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-16308G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.267-505G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.352-505G>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

22-31926543-T-TG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31926543
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31926544
    reference: chr 22
allele count: 7
allele frequency: 4.985754985754986e-4
allele num: 14040
alternate allele: TG
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.267-499dupG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.267-499dupG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.120-499dupG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-16302dupG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+1696dupG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.267-33dupG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-16302dupG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-16302dupG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-16302dupG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.45-499dupG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.267-499dupG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.352-499dupG
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3181
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: T
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

22-31926551-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31926551
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31926551
    reference: chr 22
allele count: 40
allele frequency: 2.837684449489217e-3
allele num: 14096
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.352-493C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.267-27C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-16296C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+1702C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.45-493C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-16296C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.120-493C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-16296C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-16296C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.267-493C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.267-493C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.267-493C>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1971
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum

22-31926600-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31926600
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31926600
    reference: chr 22
allele count: 4
allele frequency: 2.774694783573807e-4
allele num: 14416
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-16247G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.352-444G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.120-444G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.267-444G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.267-444G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.45-444G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.289G>T
  hgvsp: ENSP00000391339.1:p.Asp97Tyr
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-16247G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-16247G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.267-444G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+1751G>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-16247G>T
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp97Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

22-31926632-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31926632
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31926632
    reference: chr 22
allele count: 20
allele frequency: 1.388888888888889e-3
allele num: 14400
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.267-412T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-16215T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-16215T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.352-412T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.120-412T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.45-412T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.267-412T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-16215T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-16215T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+1783T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.*12T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.267-412T>C
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3305
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

22-31926663-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31926663
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31926661
    reference: chr 22
allele count: 2
allele frequency: 1.404297149276787e-4
allele num: 14242
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.120-378_120-377delAG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.45-378_45-377delAG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-16181_93-16180delAG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.267-378_267-377delAG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-16181_93-16180delAG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-16181_93-16180delAG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.352-378_352-377delAG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+1817_266+1818delAG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.*46_*47delAG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.267-378_267-377delAG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-16181_93-16180delAG
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.267-378_267-377delAG
  variant of: http://identifiers.org/hgnc/29064
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2486
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2572
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: CAG
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

22-31927010-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31927010
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31927010
    reference: chr 22
allele count: 1
allele frequency: 8.348220994106157e-6
allele num: 119786
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-15837T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.120-34T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.267-34T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-15837T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.*151-34T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-15837T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.267-34T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.267-34T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-15837T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.45-34T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+2161T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.352-34T>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5566
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10985
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
reference allele: T
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

22-31927010-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31927010
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31927010
    reference: chr 22
allele count: 6
allele frequency: 5.008932596463694e-5
allele num: 119786
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-15837T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-15837T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.267-34T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.267-34T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-15837T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+2161T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.267-34T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.120-34T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.*151-34T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-15837T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.352-34T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.45-34T>C
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3391
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10985
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5566
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD

22-31927016-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31927016
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31927016
    reference: chr 22
allele count: 1
allele frequency: 8.332916687498959e-6
allele num: 120006
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-15831A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.267-28A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.352-28A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.120-28A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.45-28A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+2167A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.*151-28A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-15831A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-15831A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-15831A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.267-28A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.267-28A>G
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8207
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5569
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3391
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

22-31927017-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31927017
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31927017
    reference: chr 22
allele count: 1
allele frequency: 8.329585020074299e-6
allele num: 120054
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.267-27T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.120-27T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.352-27T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.45-27T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.267-27T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-15830T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-15830T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.267-27T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-15830T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-15830T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+2168T>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.*151-27T>C
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8208
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
reference allele: T
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

22-31927022-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31927022
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31927022
    reference: chr 22
allele count: 4
allele frequency: 3.326845983665186e-5
allele num: 120234
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.352-22A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.45-22A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.120-22A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.*151-22A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-15825A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-15825A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-15825A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.267-22A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.267-22A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-15825A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.267-22A>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+2173A>G
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11072
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5571
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

22-31927043-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31927043
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31927043
    reference: chr 22
allele count: 3
allele frequency: 2.486366424107809e-5
allele num: 120658
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.267-1G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.120-1G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.267-1G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-15804G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.*151-1G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-15804G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.267-1G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.352-1G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.45-1G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+2194G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-15804G>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-15804G>C
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8228
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3392
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.267-1G>C
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff

22-31927045-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31927045
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31927045
    reference: chr 22
allele count: 2
allele frequency: 1.657440249279014e-5
allele num: 120668
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+2196T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.*152T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-15802T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.268T>G
  hgvsp: ENSP00000430488.1:p.Cys90Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-15802T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-15802T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.353T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.268T>G
  hgvsp: ENSP00000383145.2:p.Cys90Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.268T>G
  hgvsp: ENSP00000402679.1:p.Cys90Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.46T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.121T>G
  hgvsp: ENSP00000389364.1:p.Cys41Gly
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-15802T>G
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11168
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8227
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3392
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11916
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5573
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys90Gly
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

22-31927047-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31927047
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31927047
    reference: chr 22
allele count: 10
allele frequency: 8.286789200656314e-5
allele num: 120674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.270C>T
  hgvsp: ENST00000432498.1:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.123C>T
  hgvsp: ENST00000450787.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.48C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-15800C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-15800C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.270C>T
  hgvsp: ENST00000400288.2:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.270C>T
  hgvsp: ENST00000524296.1:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+2198C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.*154C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-15800C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.355C>T
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-15800C>T
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5574
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12133
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11173
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3393
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11909
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Cys90Cys
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

22-31927048-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31927048
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31927048
    reference: chr 22
allele count: 9
allele frequency: 7.457492293924629e-5
allele num: 120684
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+2199G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-15799G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.124G>A
  hgvsp: ENSP00000389364.1:p.Val42Met
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.271G>A
  hgvsp: ENSP00000402679.1:p.Val91Met
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-15799G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.356G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.*155G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.271G>A
  hgvsp: ENSP00000383145.2:p.Val91Met
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.49G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.271G>A
  hgvsp: ENSP00000430488.1:p.Val91Met
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-15799G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-15799G>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3392
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5573
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Val91Met
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

22-31927059-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31927059
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31927059
    reference: chr 22
allele count: 9
allele frequency: 7.455762475975876e-5
allele num: 120712
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.282G>A
  hgvsp: ENST00000400288.2:c.282G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.367G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-15788G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-15788G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.282G>A
  hgvsp: ENST00000524296.1:c.282G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.135G>A
  hgvsp: ENST00000450787.1:c.135G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-15788G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.*166G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.282G>A
  hgvsp: ENST00000432498.1:c.282G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-15788G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.60G>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+2210G>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3394
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11163
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8224
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys94Lys
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/22-31927065-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31927065
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31927065
    reference: chr 22
allele count: 2
allele frequency: 1.656698861847882e-5
allele num: 120722
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.373A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.288A>C
  hgvsp: ENSP00000402679.1:p.Leu96Phe
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-15782A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+2216A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.288A>C
  hgvsp: ENSP00000430488.1:p.Leu96Phe
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.288A>C
  hgvsp: ENSP00000383145.2:p.Leu96Phe
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.*172A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.66A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-15782A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.141A>C
  hgvsp: ENSP00000389364.1:p.Leu47Phe
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-15782A>C
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-15782A>C
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5574
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8226
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu96Phe
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

22-31927066-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31927066
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31927066
    reference: chr 22
allele count: 1
allele frequency: 8.28349430923941e-6
allele num: 120722
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.289T>A
  hgvsp: ENSP00000402679.1:p.Tyr97Asn
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.*173T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.142T>A
  hgvsp: ENSP00000389364.1:p.Tyr48Asn
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.374T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-15781T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-15781T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.67T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.289T>A
  hgvsp: ENSP00000430488.1:p.Tyr97Asn
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+2217T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.289T>A
  hgvsp: ENSP00000383145.2:p.Tyr97Asn
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-15781T>A
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-15781T>A
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11926
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8227
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr97Asn
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff

22-31927069-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31927069
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31927069
    reference: chr 22
allele count: 2
allele frequency: 1.656671415791392e-5
allele num: 120724
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000389364
  ensembl transcript: ENST00000450787
  gene symbol: SFI1
  hgvsc: ENST00000450787.1:c.145T>G
  hgvsp: ENSP00000389364.1:p.Leu49Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000486708
  gene symbol: SFI1
  hgvsc: ENST00000486708.1:n.70T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383145
  ensembl transcript: ENST00000400288
  gene symbol: SFI1
  hgvsc: ENST00000400288.2:c.292T>G
  hgvsp: ENSP00000383145.2:p.Leu98Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000198089
  ensembl transcript: ENST00000382162
  gene symbol: SFI1
  hgvsc: ENST00000382162.3:n.377T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000401199
  ensembl transcript: ENST00000443011
  gene symbol: SFI1
  hgvsc: ENST00000443011.1:c.93-15778T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000430488
  ensembl transcript: ENST00000524296
  gene symbol: SFI1
  hgvsc: ENST00000524296.1:c.292T>G
  hgvsp: ENSP00000430488.1:p.Leu98Val
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000397148
  ensembl transcript: ENST00000414585
  gene symbol: SFI1
  hgvsc: ENST00000414585.1:c.93-15778T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000391339
  ensembl transcript: ENST00000411518
  gene symbol: SFI1
  hgvsc: ENST00000411518.1:c.*176T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000383146
  ensembl transcript: ENST00000400289
  gene symbol: SFI1
  hgvsc: ENST00000400289.1:c.93-15778T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000443025
  ensembl transcript: ENST00000540643
  gene symbol: SFI1
  hgvsc: ENST00000540643.1:c.266+2220T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000416469
  ensembl transcript: ENST00000443326
  gene symbol: SFI1
  hgvsc: ENST00000443326.1:c.93-15778T>G
  variant of: http://identifiers.org/hgnc/29064
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000198089
  ensembl protein: ENSP00000402679
  ensembl transcript: ENST00000432498
  gene symbol: SFI1
  hgvsc: ENST00000432498.1:c.292T>G
  hgvsp: ENSP00000402679.1:p.Leu98Val
  variant of: http://identifiers.org/hgnc/29064
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11163
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11928
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5574
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8227
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Leu98Val
num of homozygotes: 0
reference allele: T

GenotypeDepth
all individuals: 2376
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8959
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 129
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1360
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 903
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 9876
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2868
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20692
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 785
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5529
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2648
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5004
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12861
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4978
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.532406707961928e-5
allele num: 66190
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

FS
type: SiteQuality
SIO_000300: 6.451e0

QD
type: SiteQuality
SIO_000300: 1.412e1

VQSLOD
type: SiteQuality
SIO_000300: 6.05e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.120000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.51e-1

DP
type: SiteQuality
SIO_000300: 2.203057e6

GenotypeDepth
all individuals: 502
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11585
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 903
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 323
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 162
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4296
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2874
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4979
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20694
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5010
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5571
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2648
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13418
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15944
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.063725490196078e-4
allele num: 9792
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.73e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.32e-1

FS
type: SiteQuality
SIO_000300: 5.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.86e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.551e0

DP
type: SiteQuality
SIO_000300: 2.21093e6

MQRankSum
type: SiteQuality
SIO_000300: 1.39e-1

QD
type: SiteQuality
SIO_000300: 1.114e1

GenotypeDepth
all individuals: 9396
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7105
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1360
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 501
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10116
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 162
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 178
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 323
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 902
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13540
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5014
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4979
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2649
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5591
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20691
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4297
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2880
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16048
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505751972535084e-5
allele num: 66412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.26e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

VQSLOD
type: SiteQuality
SIO_000300: 3.41e-1

FS
type: SiteQuality
SIO_000300: 1.392e0

DP
type: SiteQuality
SIO_000300: 2.212774e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.13e-2

QD
type: SiteQuality
SIO_000300: 1.232e1

GenotypeDepth
all individuals: 260
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 323
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 654
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2375
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 162
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 98
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 902
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13778
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20691
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2888
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4982
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5015
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5597
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2648
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.154603643525357e-5
allele num: 16248
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.806e0

VQSLOD
type: SiteQuality
SIO_000300: 4.92e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

QD
type: SiteQuality
SIO_000300: 1.638e1

DP
type: SiteQuality
SIO_000300: 2.216289e6

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e0

FS
type: SiteQuality
SIO_000300: 2.351e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

GenotypeDepth
all individuals: 323
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 501
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 11602
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 587
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7105
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 163
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 902
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13891
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5612
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20691
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 29
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5019
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2650
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4982
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2892
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.938e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.4e-2

DP
type: SiteQuality
SIO_000300: 2.218193e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.855e0

VQSLOD
type: SiteQuality
SIO_000300: -1.207e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.18e-2

QD
type: SiteQuality
SIO_000300: 1.027e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e-1

FS
type: SiteQuality
SIO_000300: 6.844e0

MQRankSum
type: SiteQuality
SIO_000300: -5.77e-1

GenotypeDepth
all individuals: 401
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 162
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9651
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1360
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 588
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2375
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20690
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 94
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2889
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5648
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5025
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2650
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14046
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4985
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500510173458976e-5
allele num: 66644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.77e-1

FS
type: SiteQuality
SIO_000300: 7.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.64e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.74e-1

DP
type: SiteQuality
SIO_000300: 2.220564e6

QD
type: SiteQuality
SIO_000300: 1.205e1

MQ
type: SiteQuality
SIO_000300: 5.977e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.04e0

GenotypeDepth
all individuals: 62
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 588
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9658
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2375
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 323
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9842
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7105
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14073
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20691
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2893
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4985
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5025
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5654
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2652
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -9.348e-1

MQ
type: SiteQuality
SIO_000300: 5.92e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.9e-2

FS
type: SiteQuality
SIO_000300: 9.827999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: -2.02e-1

QD
type: SiteQuality
SIO_000300: 1.394e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.57e0

DP
type: SiteQuality
SIO_000300: 2.221302e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.12e-1

GenotypeDepth
all individuals: 323
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10367
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4224
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9669
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2375
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 401
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2651
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5653
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20693
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4985
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14100
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5026
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2892
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999310158663508e-5
allele num: 66682
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.174e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.24e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: 1.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.61e-1

QD
type: SiteQuality
SIO_000300: 1.224e1

DP
type: SiteQuality
SIO_000300: 2.221865e6

GenotypeDepth
all individuals: 902
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 323
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9841
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11635
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2893
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4983
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5665
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4296
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20692
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2650
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14131
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5027
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.222574e6

VQSLOD
type: SiteQuality
SIO_000300: 5.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.91e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.377e1

MQRankSum
type: SiteQuality
SIO_000300: 2.97e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

GenotypeDepth
all individuals: 10384
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11603
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1357
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7085
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4968
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20778
bin: 9.75e1
variant carriers: 153

GenotypeQuality
all individuals: 2642
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5654
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5019
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14115
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2885
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4286
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 2
allele frequency: 2.222222222222222e-3
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 104
allele frequency: 1.206776514272453e-2
allele num: 8618
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 24
allele frequency: 3.597014477983274e-4
allele num: 66722
num of homozygotes: 0

South Asian
type: Population
allele count: 19
allele frequency: 1.150678294573644e-3
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.080799836768007e-4
allele num: 9802
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

DP
type: SiteQuality
SIO_000300: 2.23227e6

FS
type: SiteQuality
SIO_000300: 5.31e-1

QD
type: SiteQuality
SIO_000300: 1.448e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.62e0

MQRankSum
type: SiteQuality
SIO_000300: 1.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.79e-1

GenotypeDepth
all individuals: 325
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 9654
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4235
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 164
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 209
bin: 8.75e1
variant carriers: 7

GenotypeDepth
all individuals: 10398
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 405
bin: 7.75e1
variant carriers: 3

GenotypeDepth
all individuals: 2375
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2644
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5026
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14161
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4976
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5668
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2884
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20713
bin: 9.75e1
variant carriers: 45

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 45
allele frequency: 5.219206680584551e-3
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.659e0

MQRankSum
type: SiteQuality
SIO_000300: 2.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

MQ
type: SiteQuality
SIO_000300: 5.972e1

DP
type: SiteQuality
SIO_000300: 2.226699e6

QD
type: SiteQuality
SIO_000300: 1.238e1

GenotypeDepth
all individuals: 163
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9651
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 202
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 324
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9844
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11627
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5672
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14165
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4299
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4979
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20687
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2885
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5032
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2646
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997062878379188e-5
allele num: 66732
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

QD
type: SiteQuality
SIO_000300: 1.326e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.673e0

VQSLOD
type: SiteQuality
SIO_000300: -2.659e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

FS
type: SiteQuality
SIO_000300: 8.148e0

DP
type: SiteQuality
SIO_000300: 2.224091e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.21e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.32e-1

GenotypeDepth
all individuals: 4246
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10407
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 656
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2380
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1362
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 503
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9842
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 588
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2885
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4300
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4979
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5669
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2646
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14164
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20687
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 9
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5036
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495594317568783e-5
allele num: 66732
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.3e-3

QD
type: SiteQuality
SIO_000300: 1.398e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.31e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.71e-1

FS
type: SiteQuality
SIO_000300: 3.72e-1

MQ
type: SiteQuality
SIO_000300: 5.982e1

DP
type: SiteQuality
SIO_000300: 2.224147e6

GenotypeDepth
all individuals: 587
bin: 9.75e1
variant carriers: 3

GenotypeDepth
all individuals: 2379
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1362
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 656
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 10407
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 402
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 163
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14168
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20688
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5664
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5036
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4980
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2887
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2646
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4300
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

MQ
type: SiteQuality
SIO_000300: 5.94e1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.377e0

QD
type: SiteQuality
SIO_000300: 1.425e1

FS
type: SiteQuality
SIO_000300: 1.106e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.15e-2

VQSLOD
type: SiteQuality
SIO_000300: 9.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.98e0

DP
type: SiteQuality
SIO_000300: 2.224193e6

GenotypeDepth
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 325
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9643
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7114
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 163
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 590
bin: 9.75e1
variant carriers: 3

GenotypeDepth
all individuals: 4248
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5036
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14167
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20689
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2887
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4980
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5664
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2646
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4299
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997062878379188e-5
allele num: 66732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.51e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

DP
type: SiteQuality
SIO_000300: 2.224439e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.94e0

QD
type: SiteQuality
SIO_000300: 1.406e1

GenotypeDepth
all individuals: 163
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10408
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11630
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 503
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 904
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 590
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1362
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7114
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4299
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20689
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2646
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14167
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4980
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5036
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5664
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2887
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.023888720895071e-4
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.983e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.94e0

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

QD
type: SiteQuality
SIO_000300: 1.406e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.51e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-1

DP
type: SiteQuality
SIO_000300: 2.224439e6

GenotypeDepth
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 503
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4248
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 325
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 904
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7114
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 590
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14167
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4299
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5664
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2887
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5036
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4980
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2646
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20689
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

DP
type: SiteQuality
SIO_000300: 2.224439e6

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.94e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.406e1

GenotypeDepth
all individuals: 1362
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 324
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2381
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 164
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 4248
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 656
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5664
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14165
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20688
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 17
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2887
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2647
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4980
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5037
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4301
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.27e-1

QD
type: SiteQuality
SIO_000300: 8.33e0

VQSLOD
type: SiteQuality
SIO_000300: -6.667999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.72e-1

DP
type: SiteQuality
SIO_000300: 2.224104e6

FS
type: SiteQuality
SIO_000300: 8.26e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.57e-2

GenotypeDepth
all individuals: 9638
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10410
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4247
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 324
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 164
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 503
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7116
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4301
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4979
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20688
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2887
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14162
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5038
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2647
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5665
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.040399918384003e-4
allele num: 9802
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.24e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.381e0

FS
type: SiteQuality
SIO_000300: 9.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.34e0

VQSLOD
type: SiteQuality
SIO_000300: 7.39e-1

DP
type: SiteQuality
SIO_000300: 2.224218e6

QD
type: SiteQuality
SIO_000300: 1.244e1

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9635
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 656
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 503
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 402
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 586
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 324
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2381
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4980
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2647
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14160
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4301
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5664
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5037
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2889
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20686
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.983e1

QD
type: SiteQuality
SIO_000300: 1.109e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.153e0

MQRankSum
type: SiteQuality
SIO_000300: -5.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

DP
type: SiteQuality
SIO_000300: 2.224111e6

FS
type: SiteQuality
SIO_000300: 7.17e-1

GenotypeDepth
all individuals: 9844
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 656
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 586
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 11632
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 163
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2381
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1362
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20685
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2889
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5666
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4981
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14155
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5035
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2647
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4302
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.88e-1

QD
type: SiteQuality
SIO_000300: 8.9e0

FS
type: SiteQuality
SIO_000300: 5.54e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

DP
type: SiteQuality
SIO_000300: 2.22409e6

MQRankSum
type: SiteQuality
SIO_000300: -1.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.658e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.18e-1

GenotypeDepth
all individuals: 10410
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 656
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 324
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1362
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2381
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 204
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 905
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 586
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 163
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2889
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20687
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4302
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5034
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14150
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2648
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5666
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4981
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.422774076317383e-4
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

QD
type: SiteQuality
SIO_000300: 1.266e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.06e0

VQSLOD
type: SiteQuality
SIO_000300: 9.51e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.18e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.224184e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

GenotypeDepth
all individuals: 53
bin: 2.5e0
variant carriers: 1

GenotypeDepth
all individuals: 654
bin: 6.75e1
variant carriers: 6

GenotypeDepth
all individuals: 2363
bin: 5.25e1
variant carriers: 8

GenotypeDepth
all individuals: 410
bin: 7.75e1
variant carriers: 20

GenotypeDepth
all individuals: 9788
bin: 3.75e1
variant carriers: 2

GenotypeDepth
all individuals: 1356
bin: 5.75e1
variant carriers: 6

GenotypeDepth
all individuals: 181
bin: 9.25e1
variant carriers: 22

GenotypeDepth
all individuals: 831
bin: 9.75e1
variant carriers: 282

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2881
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5002
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20837
bin: 9.75e1
variant carriers: 421

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5650
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2638
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14112
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4959
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4278
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 413
allele frequency: 4.213425831462967e-2
allele num: 9802
num of homozygotes: 13

Latino
type: Population
allele count: 15
allele frequency: 1.295784381478922e-3
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.496402877697842e-5
allele num: 66720
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21153380179307e-4
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.49e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.412e1

MQ
type: SiteQuality
SIO_000300: 5.977e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.38e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.86e0

DP
type: SiteQuality
SIO_000300: 2.253609e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

GenotypeDepth
all individuals: 338
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9788
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10369
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 181
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7076
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4211
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2363
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 654
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20837
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5650
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4278
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2881
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2638
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5002
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4959
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14112
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.32e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.412e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

DP
type: SiteQuality
SIO_000300: 2.253609e6

MQ
type: SiteQuality
SIO_000300: 5.977e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.49e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.86e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.38e-2

GenotypeDepth
all individuals: 1382
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 64
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 162
bin: 9.25e1
variant carriers: 2

GenotypeDepth
all individuals: 11637
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 323
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 666
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 498
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20608
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5695
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2650
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2897
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4312
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14167
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5029
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4989
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020199959192002e-4
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

East Asian
type: Population
allele count: 14
allele frequency: 1.623376623376623e-3
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.04e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.13e0

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-1

DP
type: SiteQuality
SIO_000300: 2.223873e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

QD
type: SiteQuality
SIO_000300: 1.159e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.837e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-1

GenotypeDepth
all individuals: 918
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 208
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 33
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1386
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 402
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 499
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 4247
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 7125
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 628
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 668
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4307
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20677
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 57
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5676
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14042
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2644
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2892
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4978
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5021
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.059975520195838e-4
allele num: 9804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.79e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.81e0

DP
type: SiteQuality
SIO_000300: 2.230338e6

MQRankSum
type: SiteQuality
SIO_000300: 3.31e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

QD
type: SiteQuality
SIO_000300: 1.334e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

GenotypeDepth
all individuals: 9834
bin: 3.75e1
variant carriers: 2

GenotypeDepth
all individuals: 7125
bin: 4.25e1
variant carriers: 6

GenotypeDepth
all individuals: 402
bin: 7.75e1
variant carriers: 4

GenotypeDepth
all individuals: 33
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 208
bin: 8.75e1
variant carriers: 6

GenotypeDepth
all individuals: 4247
bin: 4.75e1
variant carriers: 4

GenotypeDepth
all individuals: 918
bin: 6.25e1
variant carriers: 8

GenotypeDepth
all individuals: 9491
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 668
bin: 6.75e1
variant carriers: 3

GenotypeDepth
all individuals: 499
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4307
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5676
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5021
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2892
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20677
bin: 9.75e1
variant carriers: 124

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2644
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14042
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4978
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 58
allele frequency: 3.516856657773466e-3
allele num: 16492
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.023888720895071e-4
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.591568762957844e-4
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 61
allele frequency: 9.145153068873497e-4
allele num: 66702
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

MQRankSum
type: SiteQuality
SIO_000300: 3.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.79e-1

DP
type: SiteQuality
SIO_000300: 2.230338e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.57e0

QD
type: SiteQuality
SIO_000300: 1.334e1

GenotypeDepth
all individuals: 560
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 160
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9496
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11640
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4257
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 497
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 399
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7134
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 912
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5687
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4318
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4991
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2649
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2896
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14078
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5027
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20592
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

QD
type: SiteQuality
SIO_000300: 8.65e0

MQRankSum
type: SiteQuality
SIO_000300: 4.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

FS
type: SiteQuality
SIO_000300: 7.99e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.47e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.425e0

DP
type: SiteQuality
SIO_000300: 2.222699e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

GenotypeDepth
all individuals: 323
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 497
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 399
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10397
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 560
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 160
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2891
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20592
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2649
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4991
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5026
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4318
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14032
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5677
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.019991840065279e-4
allele num: 9804
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.08e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.32e-1

FS
type: SiteQuality
SIO_000300: 8.244999999999999e0

QD
type: SiteQuality
SIO_000300: 1.372e1

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.389999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.81e-1

DP
type: SiteQuality
SIO_000300: 2.222058e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.86e-1

GenotypeDepth
all individuals: 9848
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7137
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10393
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 161
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 666
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4257
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 399
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2648
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4318
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5025
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20591
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5672
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13998
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2888
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4991
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.072382803011902e-5
allele num: 16468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.57e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

QD
type: SiteQuality
SIO_000300: 1.186e1

DP
type: SiteQuality
SIO_000300: 2.221911e6

FS
type: SiteQuality
SIO_000300: 8.007999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.66e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.49e0

GenotypeDepth
all individuals: 10401
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 497
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2387
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4258
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 666
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 399
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2648
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4990
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13984
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20590
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2890
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5022
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4318
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5671
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.019991840065279e-4
allele num: 9804
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

FS
type: SiteQuality
SIO_000300: 9.156000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: 2.58e-1

DP
type: SiteQuality
SIO_000300: 2.221752e6

MQ
type: SiteQuality
SIO_000300: 5.957e1

QD
type: SiteQuality
SIO_000300: 1.298e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQRankSum
type: SiteQuality
SIO_000300: -2.32e-1

GenotypeDepth
all individuals: 9844
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 324
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 560
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 10412
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 399
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20590
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2648
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5023
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4318
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4990
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2890
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5671
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13982
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499970000599988e-5
allele num: 66668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.221529e6

VQSLOD
type: SiteQuality
SIO_000300: 6.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.62e0

MQRankSum
type: SiteQuality
SIO_000300: -7.81e-1

QD
type: SiteQuality
SIO_000300: 1.515e1

FS
type: SiteQuality
SIO_000300: 1.235e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.07e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeDepth
all individuals: 2387
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 912
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 10343
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9164
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 499
bin: 7.25e1
variant carriers: 2

GenotypeDepth
all individuals: 159
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7139
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20590
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2882
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4317
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4985
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13645
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2648
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5012
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5629
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.27507023329669e-4
allele num: 16374
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.003634397621121e-5
allele num: 66586
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.978e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.85e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

QD
type: SiteQuality
SIO_000300: 1.205e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.19e-1

FS
type: SiteQuality
SIO_000300: 3.241e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.2e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

DP
type: SiteQuality
SIO_000300: 2.218471e6

GenotypeDepth
all individuals: 1390
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 499
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10332
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 560
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 325
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 401
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11603
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5630
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5011
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13652
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2649
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4984
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2882
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4317
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20589
bin: 9.75e1
variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501997656883655e-5
allele num: 66578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160362032954282e-4
allele num: 8618
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.10798924993892e-5
allele num: 16372
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.96e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

FS
type: SiteQuality
SIO_000300: 3.115e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.401e0

MQRankSum
type: SiteQuality
SIO_000300: 3.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

QD
type: SiteQuality
SIO_000300: 1.101e1

DP
type: SiteQuality
SIO_000300: 2.217921e6

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 499
bin: 7.25e1
variant carriers: 3

GenotypeDepth
all individuals: 11603
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 912
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 160
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 667
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4254
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2649
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4984
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5011
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13652
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5630
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2882
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20589
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4317
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.501997656883655e-4
allele num: 66578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

FS
type: SiteQuality
SIO_000300: 3.115e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.401e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

QD
type: SiteQuality
SIO_000300: 1.101e1

VQSLOD
type: SiteQuality
SIO_000300: 2.34e0

DP
type: SiteQuality
SIO_000300: 2.217921e6

GenotypeDepth
all individuals: 160
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 342
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 558
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 667
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9847
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4255
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5013
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13627
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20580
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 90
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5632
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2648
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4317
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2881
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4982
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.110228522546743e-5
allele num: 16366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.073e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.54e0

MQRankSum
type: SiteQuality
SIO_000300: 5.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.905e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

DP
type: SiteQuality
SIO_000300: 2.216749e6

FS
type: SiteQuality
SIO_000300: 1.9153e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.132e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 63
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 667
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2389
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 7129
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1389
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13304
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5010
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4983
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20580
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 57
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2874
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4316
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5593
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2649
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.041649652919559e-4
allele num: 9796
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16278
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.212749e6

MQRankSum
type: SiteQuality
SIO_000300: 4.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.94e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.0e-1

FS
type: SiteQuality
SIO_000300: 1.163e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.97e-1

QD
type: SiteQuality
SIO_000300: 1.59e1

MQ
type: SiteQuality
SIO_000300: 5.953e1

GenotypeDepth
all individuals: 2388
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9847
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 399
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 324
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10220
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7130
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5574
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13123
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4316
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2648
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4982
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2871
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5007
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20580
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.153846153846154e-5
allele num: 16250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66508
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.211339e6

VQSLOD
type: SiteQuality
SIO_000300: 3.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.432e0

MQRankSum
type: SiteQuality
SIO_000300: 8.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.8e-1

QD
type: SiteQuality
SIO_000300: 1.393e1

GenotypeDepth
all individuals: 198
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 159
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 911
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1390
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 558
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 667
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5563
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20580
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5004
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2864
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13110
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4316
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4983
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2648
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66496
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.159152500615915e-5
allele num: 16236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.07e0

DP
type: SiteQuality
SIO_000300: 2.211555e6

MQRankSum
type: SiteQuality
SIO_000300: -7.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
SIO_000300: 1.494e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

VQSLOD
type: SiteQuality
SIO_000300: 4.26e-1

GenotypeDepth
all individuals: 324
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11538
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 667
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7128
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1192
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2847
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4978
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12080
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4313
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2647
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5463
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4981
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20579
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505797319680771e-5
allele num: 66410
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16034
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.762e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.198086e6

MQRankSum
type: SiteQuality
SIO_000300: -1.42e-1

FS
type: SiteQuality
SIO_000300: 4.882e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e0

VQSLOD
type: SiteQuality
SIO_000300: 3.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.57e0

QD
type: SiteQuality
SIO_000300: 1.326e1

GenotypeDepth
all individuals: 1390
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 667
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 912
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4252
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11929
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1244
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4312
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5455
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2846
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20580
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4978
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4977
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2647
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506069459923492e-5
allele num: 66398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16008
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.639e0

FS
type: SiteQuality
SIO_000300: 1.272e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.344e0

MQ
type: SiteQuality
SIO_000300: 5.791e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.23e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 2.19655e6

QD
type: SiteQuality
SIO_000300: 7.77e0

GenotypeDepth
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 496
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 558
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7102
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1515
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2835
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 595
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2649
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5393
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4976
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11012
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20577
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4967
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4312
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.01331886940276e-5
allele num: 66372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9780
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15950
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.405e1

MQRankSum
type: SiteQuality
SIO_000300: 3.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.63e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.89e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

DP
type: SiteQuality
SIO_000300: 2.186054e6

GenotypeDepth
all individuals: 324
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 202
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 667
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9814
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20574
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 5358
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 884
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2829
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10602
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 652
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1570
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4972
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4963
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2644
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4310
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.523113107981787e-5
allele num: 66326
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9778
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.123595505617978e-3
allele num: 890
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

QD
type: SiteQuality
SIO_000300: 1.5e1

DP
type: SiteQuality
SIO_000300: 2.181754e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

MQRankSum
type: SiteQuality
SIO_000300: 6.53e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.79e-1

FS
type: SiteQuality
SIO_000300: 8.942e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-1

GenotypeDepth
all individuals: 400
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11430
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 202
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2389
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2644
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1584
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4311
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5359
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 921
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4974
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4961
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 676
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2825
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10499
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20572
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9780
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507749834147518e-5
allele num: 66324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15890
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.24e-1

FS
type: SiteQuality
SIO_000300: 6.04e0

MQRankSum
type: SiteQuality
SIO_000300: 6.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.419e0

DP
type: SiteQuality
SIO_000300: 2.180301e6

QD
type: SiteQuality
SIO_000300: 1.173e1

GenotypeDepth
all individuals: 2637
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 667
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 912
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 202
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7466
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4948
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2711
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4893
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2641
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1062
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1410
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4775
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1354
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20565
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4304
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1486
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66112
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9742
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.454111268878275e-5
allele num: 15494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.55e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

DP
type: SiteQuality
SIO_000300: 2.160528e6

MQRankSum
type: SiteQuality
SIO_000300: -1.062e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.062e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.37e-1

GenotypeDepth
all individuals: 2223
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 912
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7089
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 159
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4948
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1062
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1410
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4304
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20565
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 128
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4775
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1486
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4893
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7466
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2641
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2711
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1354
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9742
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66112
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.454111268878275e-5
allele num: 15494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.062e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.160528e6

VQSLOD
type: SiteQuality
SIO_000300: 4.55e0

QD
type: SiteQuality
SIO_000300: 1.062e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

GenotypeDepth
all individuals: 912
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9684
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2576
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 667
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2641
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1397
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1421
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4946
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1430
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1234
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20561
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 163
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2692
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4574
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1662
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4883
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4309
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5450
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 854
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9716
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.580581582218988e-5
allele num: 65958
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.039e0

QD
type: SiteQuality
SIO_000300: 1.375e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.73e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

MQRankSum
type: SiteQuality
SIO_000300: 4.74e-1

DP
type: SiteQuality
SIO_000300: 2.161505e6

GenotypeDepth
all individuals: 178
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3110
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1321
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.068680182043856e-4
allele num: 4834
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e0

QD
type: SiteQuality
SIO_000300: 9.57e0

MQ
type: SiteQuality
SIO_000300: 5.697e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.03e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.65e0

MQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.079e0

VQSLOD
type: SiteQuality
SIO_000300: -1.932e0

DP
type: SiteQuality
SIO_000300: 1.9256e5

GenotypeDepth
all individuals: 19
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 999
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 3472
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1448
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4844
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 9.421265141318977e-4
allele num: 7430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.96355e5

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.02e-2

MQ
type: SiteQuality
SIO_000300: 5.898e1

VQSLOD
type: SiteQuality
SIO_000300: 4.5e0

MQRankSum
type: SiteQuality
SIO_000300: -7.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e-1

QD
type: SiteQuality
SIO_000300: 1.473e1

GenotypeDepth
all individuals: 30
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1029
bin: 9.75e1
variant carriers: 40

GenotypeQuality
all individuals: 110
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1580
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3835
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 146
num of homozygotes: 0

South Asian
type: Population
allele count: 40
allele frequency: 5.360493165371214e-3
allele num: 7462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 270
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.709e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.23e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.079e0

MQ
type: SiteQuality
SIO_000300: 5.797e1

MQRankSum
type: SiteQuality
SIO_000300: -1.8e-2

DP
type: SiteQuality
SIO_000300: 2.01888e5

QD
type: SiteQuality
SIO_000300: 1.234e1

FS
type: SiteQuality
SIO_000300: 1.442e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.73e-1

GenotypeDepth
all individuals: 35
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 612
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1674
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4269
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 81
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4984
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.940110323089047e-4
allele num: 7614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 150
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.546099290780142e-3
allele num: 282
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.53e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.125e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.937e0

FS
type: SiteQuality
SIO_000300: 6.697e0

DP
type: SiteQuality
SIO_000300: 2.08585e5

MQ
type: SiteQuality
SIO_000300: 5.578e1

QD
type: SiteQuality
SIO_000300: 9.279999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

GenotypeDepth
all individuals: 154
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1831
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1001
bin: 9.75e1
variant carriers: 19

GenotypeQuality
all individuals: 149
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 78
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 815
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4063
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4994
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 150
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7584
num of homozygotes: 0

African
type: Population
allele count: 20
allele frequency: 2.28310502283105e-2
allele num: 876
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.29e-1

FS
type: SiteQuality
SIO_000300: 5.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.67e-1

DP
type: SiteQuality
SIO_000300: 2.08085e5

MQ
type: SiteQuality
SIO_000300: 5.79e1

VQSLOD
type: SiteQuality
SIO_000300: -4.231e-1

QD
type: SiteQuality
SIO_000300: 1.125e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.92e-2

GenotypeDepth
all individuals: 41
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1769
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1956
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 60
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 369
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.051863857374392e-4
allele num: 4936
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 150
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7486
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.79e1

DP
type: SiteQuality
SIO_000300: 2.00593e5

QD
type: SiteQuality
SIO_000300: 1.315e1

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.28e-2

FS
type: SiteQuality
SIO_000300: 2.01e0

VQSLOD
type: SiteQuality
SIO_000300: 2.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

GenotypeDepth
all individuals: 3391
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3691
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4937
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15726
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4364
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2298
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3079
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6350
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17623
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509206157561123e-5
allele num: 66260
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9752
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

QD
type: SiteQuality
SIO_000300: 1.47e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.46e0

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

DP
type: SiteQuality
SIO_000300: 2.235373e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.78e0

GenotypeDepth
all individuals: 410
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4937
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3079
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2298
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17623
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 489
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4364
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6350
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15726
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3691
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16252
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9752
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.055236945366738e-5
allele num: 66260
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.46e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.78e0

DP
type: SiteQuality
SIO_000300: 2.235373e6

QD
type: SiteQuality
SIO_000300: 1.47e1

GenotypeDepth
all individuals: 348
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6416
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17619
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 373
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2300
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4954
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3695
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16595
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3096
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4374
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16304
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9762
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506704836522525e-5
allele num: 66370
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.429e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.85e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

QD
type: SiteQuality
SIO_000300: 1.569e1

MQRankSum
type: SiteQuality
SIO_000300: 1.88e0

FS
type: SiteQuality
SIO_000300: 9.404e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

DP
type: SiteQuality
SIO_000300: 2.244718e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.466e0

GenotypeDepth
all individuals: 5570
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3097
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4377
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4954
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2300
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17620
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3694
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6429
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16691
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9762
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.659508139937652e-5
allele num: 11548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.245771e6

MQRankSum
type: SiteQuality
SIO_000300: 8.120000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.255e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e0

FS
type: SiteQuality
SIO_000300: 7.209e0

VQSLOD
type: SiteQuality
SIO_000300: 1.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.62e0

GenotypeDepth
all individuals: 1688
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3104
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6465
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17077
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3694
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2304
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4964
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4380
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17621
bin: 9.75e1
variant carriers: 4

African
type: Population
allele count: 1
allele frequency: 1.023331968890708e-4
allele num: 9772
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.513993379476377e-5
allele num: 66460
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16386
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.769e0

DP
type: SiteQuality
SIO_000300: 2.250523e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.76e0

VQSLOD
type: SiteQuality
SIO_000300: 1.48e0

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.548e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.03e-1

GenotypeDepth
all individuals: 267
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3122
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2304
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6547
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4381
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4958
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17636
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17626
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3697
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.06435137895812e-4
allele num: 9790
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.2e-2

QD
type: SiteQuality
SIO_000300: 1.375e1

FS
type: SiteQuality
SIO_000300: 1.919e0

DP
type: SiteQuality
SIO_000300: 2.259936e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.66e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

GenotypeDepth
all individuals: 349
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1688
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1174
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 728
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6547
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4381
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4957
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17659
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2304
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17625
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3123
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3697
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999580058791769e-5
allele num: 66676
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.366e0

DP
type: SiteQuality
SIO_000300: 2.26007e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.35e0

QD
type: SiteQuality
SIO_000300: 1.383e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.679999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

MQRankSum
type: SiteQuality
SIO_000300: -5.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeDepth
all individuals: 729
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 410
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17653
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3121
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2304
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17631
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6546
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4379
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4955
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3696
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.282896263634254e-4
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66680
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21197430614471e-4
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.362e0

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.15e-1

FS
type: SiteQuality
SIO_000300: 3.819e0

DP
type: SiteQuality
SIO_000300: 2.260504e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.81e-1

QD
type: SiteQuality
SIO_000300: 1.081e1

MQ
type: SiteQuality
SIO_000300: 5.979e1

GenotypeDepth
all individuals: 1174
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1693
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4955
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4378
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6549
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3699
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3122
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2304
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17627
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17673
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.998260504453708e-5
allele num: 66686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.481086098862845e-4
allele num: 8618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728011059270779e-4
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.54e-1

FS
type: SiteQuality
SIO_000300: 6.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.24e-1

DP
type: SiteQuality
SIO_000300: 2.260908e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 9.63e-1

QD
type: SiteQuality
SIO_000300: 1.101e1

GenotypeDepth
all individuals: 410
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5572
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4378
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3121
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6549
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3699
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17629
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2303
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4954
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17701
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 9
allele frequency: 7.774706288873532e-4
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.177e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.335e0

MQRankSum
type: SiteQuality
SIO_000300: 2.14e-1

FS
type: SiteQuality
SIO_000300: 1.879e0

DP
type: SiteQuality
SIO_000300: 2.261276e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.57e-1

GenotypeDepth
all individuals: 728
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4380
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17697
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3701
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17623
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2303
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4957
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3122
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6550
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998231043684226e-5
allele num: 66706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.39e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

DP
type: SiteQuality
SIO_000300: 2.260943e6

FS
type: SiteQuality
SIO_000300: 6.474e0

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

QD
type: SiteQuality
SIO_000300: 1.226e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 6.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.06e-1

GenotypeDepth
all individuals: 5574
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6550
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2303
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3701
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4381
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3122
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4957
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17623
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 17697
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e0

VQSLOD
type: SiteQuality
SIO_000300: -3.49e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -7.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.169e0

FS
type: SiteQuality
SIO_000300: 2.755e0

QD
type: SiteQuality
SIO_000300: 1.097e1

DP
type: SiteQuality
SIO_000300: 2.260862e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

GenotypeDepth
all individuals: 368
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 728
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0