16-1374743-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374743
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374743
    reference: chr 16
allele count: 1
allele frequency: 8.271845945141119e-6
allele num: 120892
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103275
  ensembl transcript: ENST00000568288
  gene symbol: UBE2I
  hgvsc: ENST00000568288.1:n.490G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.426G>A
  hgvsp: ENST00000403747.2:c.426G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.426G>A
  hgvsp: ENST00000325437.5:c.426G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.426G>A
  hgvsp: ENST00000397514.3:c.426G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.426G>A
  hgvsp: ENST00000397515.2:c.426G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.426G>A
  hgvsp: ENST00000355803.4:c.426G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.426G>A
  hgvsp: ENST00000406620.1:c.426G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.426G>A
  hgvsp: ENST00000566587.1:c.426G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103275
  ensembl transcript: ENST00000568989
  gene symbol: UBE2I
  hgvsc: ENST00000568989.1:n.496G>A
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10391
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7508
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10909
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9391
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3167
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val142Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

16-1374749-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374749
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374749
    reference: chr 16
allele count: 7
allele frequency: 5.788568404339772e-5
allele num: 120928
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.432C>T
  hgvsp: ENST00000403747.2:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.432C>T
  hgvsp: ENST00000406620.1:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103275
  ensembl transcript: ENST00000568288
  gene symbol: UBE2I
  hgvsc: ENST00000568288.1:n.496C>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.432C>T
  hgvsp: ENST00000397514.3:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.432C>T
  hgvsp: ENST00000355803.4:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.432C>T
  hgvsp: ENST00000397515.2:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.432C>T
  hgvsp: ENST00000566587.1:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.432C>T
  hgvsp: ENST00000325437.5:c.432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7512
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10916
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5444
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9393
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5411
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3166
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23702
  bin: 9.75e1
  variant carriers: 7
hgvs: p.Tyr144Tyr
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

16-1374754-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374754
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374754
    reference: chr 16
allele count: 1
allele frequency: 8.267469162340024e-6
allele num: 120956
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.437A>G
  hgvsp: ENSP00000380650.2:p.Lys146Arg
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.437A>G
  hgvsp: ENSP00000384568.1:p.Lys146Arg
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.437A>G
  hgvsp: ENSP00000457064.1:p.Lys146Arg
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.437A>G
  hgvsp: ENSP00000324897.5:p.Lys146Arg
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.437A>G
  hgvsp: ENSP00000385009.2:p.Lys146Arg
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.437A>G
  hgvsp: ENSP00000348056.4:p.Lys146Arg
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.437A>G
  hgvsp: ENSP00000380649.3:p.Lys146Arg
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000103275
  ensembl transcript: ENST00000568288
  gene symbol: UBE2I
  hgvsc: ENST00000568288.1:n.501A>G
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9396
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10421
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10912
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4623
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4036
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Lys146Arg
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

16-1374773-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374773
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374773
    reference: chr 16
allele count: 2
allele frequency: 1.652701340340787e-5
allele num: 121014
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.456C>T
  hgvsp: ENST00000397514.3:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.456C>T
  hgvsp: ENST00000566587.1:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.456C>T
  hgvsp: ENST00000403747.2:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.456C>T
  hgvsp: ENST00000325437.5:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.456C>T
  hgvsp: ENST00000406620.1:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.456C>T
  hgvsp: ENST00000397515.2:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.456C>T
  hgvsp: ENST00000355803.4:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10519
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5446
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9399
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3161
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4623
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5435
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala152Ala
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

16-1374785-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374785
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374785
    reference: chr 16
allele count: 1
allele frequency: 8.263233568560049e-6
allele num: 121018
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.468G>A
  hgvsp: ENST00000403747.2:c.468G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.468G>A
  hgvsp: ENST00000355803.4:c.468G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.468G>A
  hgvsp: ENST00000325437.5:c.468G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.468G>A
  hgvsp: ENST00000406620.1:c.468G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.468G>A
  hgvsp: ENST00000397514.3:c.468G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.468G>A
  hgvsp: ENST00000397515.2:c.468G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.468G>A
  hgvsp: ENST00000566587.1:c.468G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5941
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10493
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10927
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5444
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3140
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2604
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala156Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-1374791-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374791
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374791
    reference: chr 16
allele count: 1
allele frequency: 8.262141216517673e-6
allele num: 121034
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.474A>G
  hgvsp: ENST00000397515.2:c.474A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.474A>G
  hgvsp: ENST00000403747.2:c.474A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.474A>G
  hgvsp: ENST00000325437.5:c.474A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.474A>G
  hgvsp: ENST00000566587.1:c.474A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.474A>G
  hgvsp: ENST00000406620.1:c.474A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.474A>G
  hgvsp: ENST00000397514.3:c.474A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.474A>G
  hgvsp: ENST00000355803.4:c.474A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9399
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10882
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10467
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5444
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4842
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4030
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser158Ser
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

16-1374793-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374793
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374793
    reference: chr 16
allele count: 2
allele frequency: 1.652537471287161e-5
allele num: 121026
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.476A>G
  hgvsp: ENST00000397515.2:c.476A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: stop_retained_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.476A>G
  hgvsp: ENST00000355803.4:c.476A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.476A>G
  hgvsp: ENST00000566587.1:c.476A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.476A>G
  hgvsp: ENST00000397514.3:c.476A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.476A>G
  hgvsp: ENST00000403747.2:c.476A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.476A>G
  hgvsp: ENST00000406620.1:c.476A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.476A>G
  hgvsp: ENST00000325437.5:c.476A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: stop retained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9400
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5857
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4841
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11445
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ter159Ter
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

16-1374797-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374797
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374797
    reference: chr 16
allele count: 1
allele frequency: 8.26296045347127e-6
allele num: 121022
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.*3A>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.*3A>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.*3A>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.*3A>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.*3A>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.*3A>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.*3A>G
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5791
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10864
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10379
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7515
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3103
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11309
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4031
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-1374799-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374799
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374799
    reference: chr 16
allele count: 4
allele frequency: 3.305566574110803e-5
allele num: 121008
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.*5C>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.*5C>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.*5C>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.*5C>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.*5C>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.*5C>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.*5C>T
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5728
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10323
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4029
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5323
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2605
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

16-1374800-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374800
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374800
    reference: chr 16
allele count: 3
allele frequency: 2.479338842975207e-5
allele num: 121000
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.*6G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.*6G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.*6G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.*6G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.*6G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.*6G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.*6G>A
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5709
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10823
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5447
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10338
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4604
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5321
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

16-1374804-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374804
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374804
    reference: chr 16
allele count: 1
allele frequency: 8.264736024331383e-6
allele num: 120996
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.*10T>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.*10T>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.*10T>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.*10T>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.*10T>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.*10T>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.*10T>G
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5617
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10211
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9394
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10786
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5445
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4800
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3084
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5259
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

16-1374806-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374806
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374806
    reference: chr 16
allele count: 1
allele frequency: 8.264462809917356e-6
allele num: 121000
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.*12G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.*12G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.*12G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.*12G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.*12G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.*12G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.*12G>A
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10758
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5445
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10151
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5241
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4800
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4026
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3072
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10753
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

16-1374811-ATCG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374811
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374808
    reference: chr 16
allele count: 1
allele frequency: 8.265555775970376e-6
allele num: 120984
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.*20_*22delGTC
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.*20_*22delGTC
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.*20_*22delGTC
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.*20_*22delGTC
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.*20_*22delGTC
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.*20_*22delGTC
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.*20_*22delGTC
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7511
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5447
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9380
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5920
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10021
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2606
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: ATCG
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS

16-1374812-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374812
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374812
    reference: chr 16
allele count: 1
allele frequency: 8.266649031148734e-6
allele num: 120968
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.*18T>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.*18T>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.*18T>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.*18T>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.*18T>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.*18T>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.*18T>A
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9828
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7509
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5447
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9379
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6000
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4027
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23701
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9863
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD

16-1374813-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374813
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374813
    reference: chr 16
allele count: 2
allele frequency: 1.653603201375798e-5
allele num: 120948
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.*19C>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.*19C>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.*19C>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.*19C>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.*19C>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.*19C>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.*19C>T
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9757
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5449
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9384
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7508
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4577
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2603
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5091
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4025
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum

16-1374814-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374814
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374814
    reference: chr 16
allele count: 6
allele frequency: 4.961465947805378e-5
allele num: 120932
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.*20G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.*20G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.*20G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.*20G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.*20G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.*20G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.*20G>A
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10534
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7505
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9729
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5448
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9368
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3412
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4019
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3009
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2604
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

16-1374814-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374814
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374814
    reference: chr 16
allele count: 67
allele frequency: 5.540303641716006e-4
allele num: 120932
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.*20G>C
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.*20G>C
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.*20G>C
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.*20G>C
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.*20G>C
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.*20G>C
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.*20G>C
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7505
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 5.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 9729
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9368
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 10534
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3412
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 6102
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5448
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3009
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 2
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

16-1374816-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374816
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374816
    reference: chr 16
allele count: 287
allele frequency: 2.373156049480717e-3
allele num: 120936
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.*22C>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.*22C>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.*22C>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.*22C>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.*22C>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.*22C>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.*22C>T
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 9.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 5.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5456
  bin: 4.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 9739
  bin: 2.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 6097
  bin: 2.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 9352
  bin: 3.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 7516
  bin: 4.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 5.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 10470
  bin: 3.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 7.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5024
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 817
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4560
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 954
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

16-1374817-A-AG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374817
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374818
    reference: chr 16
allele count: 1
allele frequency: 8.268973158913126e-6
allele num: 120934
alternate allele: AG
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.*23_*24insG
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.*23_*24insG
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.*23_*24insG
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.*23_*24insG
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.*23_*24insG
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.*23_*24insG
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.*23_*24insG
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5450
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6052
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9343
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10479
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4576
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3031
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1102
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2604
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

16-1374817-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374817
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374817
    reference: chr 16
allele count: 1
allele frequency: 8.268973158913126e-6
allele num: 120934
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.*23A>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.*23A>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.*23A>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.*23A>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.*23A>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.*23A>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.*23A>T
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6052
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9809
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9343
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10479
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5450
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3031
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4770
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23694
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4021
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum

16-1374818-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374818
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374818
    reference: chr 16
allele count: 85536
allele frequency: 7.084900190507745e-1
allele num: 120730
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.*24A>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.*24A>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.*24A>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.*24A>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.*24A>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.*24A>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.*24A>G
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 9.75e1
  variant carriers: 2095
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 6.75e1
  variant carriers: 1408
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 315
genotype depth: GenotypeDepth
  all individuals: 4807
  bin: 5.25e1
  variant carriers: 4714
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 1.25e1
  variant carriers: 392
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 6.25e1
  variant carriers: 2109
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 7.75e1
  variant carriers: 701
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 8.75e1
  variant carriers: 388
genotype depth: GenotypeDepth
  all individuals: 8815
  bin: 3.75e1
  variant carriers: 8320
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 8183
  bin: 4.25e1
  variant carriers: 7948
genotype depth: GenotypeDepth
  all individuals: 6850
  bin: 2.75e1
  variant carriers: 4720
genotype depth: GenotypeDepth
  all individuals: 6601
  bin: 4.75e1
  variant carriers: 6456
genotype depth: GenotypeDepth
  all individuals: 3149
  bin: 5.75e1
  variant carriers: 3071
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 8.25e1
  variant carriers: 500
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 1.75e1
  variant carriers: 1007
genotype depth: GenotypeDepth
  all individuals: 8206
  bin: 3.25e1
  variant carriers: 6853
genotype depth: GenotypeDepth
  all individuals: 3311
  bin: 2.25e1
  variant carriers: 2575
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 7.25e1
  variant carriers: 988
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.5e0
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 3.25e1
  variant carriers: 81
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 5.75e1
  variant carriers: 233
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 2.75e1
  variant carriers: 69
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 3.75e1
  variant carriers: 146
genotype quality: GenotypeQuality
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 1006
genotype quality: GenotypeQuality
  all individuals: 3290
  bin: 6.25e1
  variant carriers: 522
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 8.75e1
  variant carriers: 697
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 7.25e1
  variant carriers: 501
num of homozygotes: 31043
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-1374818-A-AACAGCGACCTTGTGGCATCGTCAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374818
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374842
    reference: chr 16
allele count: 1
allele frequency: 8.282945415389712e-6
allele num: 120730
alternate allele: AACAGCGACCTTGTGGCATCGTCAG
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3311
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6601
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4807
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47930
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1526
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

16-1374830-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374830
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374830
    reference: chr 16
allele count: 1
allele frequency: 8.3462700519138e-6
allele num: 119814
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.*36T>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.*36T>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.*36T>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.*36T>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.*36T>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.*36T>G
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.*36T>G
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4414
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2287
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5762
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4802
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12869
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2298
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2430
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7115
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1515
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6724
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3132
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS

16-1374837-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374837
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374837
    reference: chr 16
allele count: 1
allele frequency: 8.391092016715055e-6
allele num: 119174
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.*43G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.*43G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.*43G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.*43G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.*43G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.*43G>A
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.*43G>A
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10106
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8202
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10362
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14388
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4466
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4462
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2839
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2206
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2239
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16948
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

16-1374839-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374839
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374839
    reference: chr 16
allele count: 1
allele frequency: 8.392218734789103e-6
allele num: 119158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.*45A>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.*45A>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.*45A>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.*45A>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.*45A>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.*45A>T
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.*45A>T
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13716
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9453
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4405
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10319
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4480
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2626
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1846
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2214
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3974
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1377
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

16-1374845-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1374845
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1374845
    reference: chr 16
allele count: 2
allele frequency: 1.691503577530066e-5
allele num: 118238
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380650
  ensembl transcript: ENST00000397515
  gene symbol: UBE2I
  hgvsc: ENST00000397515.2:c.*51T>C
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000457064
  ensembl transcript: ENST00000566587
  gene symbol: UBE2I
  hgvsc: ENST00000566587.1:c.*51T>C
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000384568
  ensembl transcript: ENST00000406620
  gene symbol: UBE2I
  hgvsc: ENST00000406620.1:c.*51T>C
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000385009
  ensembl transcript: ENST00000403747
  gene symbol: UBE2I
  hgvsc: ENST00000403747.2:c.*51T>C
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000348056
  ensembl transcript: ENST00000355803
  gene symbol: UBE2I
  hgvsc: ENST00000355803.4:c.*51T>C
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000380649
  ensembl transcript: ENST00000397514
  gene symbol: UBE2I
  hgvsc: ENST00000397514.3:c.*51T>C
  variant of: http://identifiers.org/hgnc/12485
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000103275
  ensembl protein: ENSP00000324897
  ensembl transcript: ENST00000325437
  gene symbol: UBE2I
  hgvsc: ENST00000325437.5:c.*51T>C
  variant of: http://identifiers.org/hgnc/12485
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7636
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11675
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13575
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3160
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2855
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1798
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6711
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4042
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2159
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2184
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD

16-1384648-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384648
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384648
    reference: chr 16
allele count: 1
allele frequency: 6.040106305870983e-5
allele num: 16556
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+898C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+898C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.-15C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.144C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+898C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+898C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+898C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34026
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3591
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30299
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3751
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

16-1384650-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384650
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384650
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 16660
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+900G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.-13G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.146G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+900G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+900G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+900G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+900G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34915
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3986
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31820
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD

16-1384655-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384655
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384655
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 16788
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+905C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-113C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.-8C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+905C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.151C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+905C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+905C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+905C>G
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35890
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5355
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2010
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4753
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33702
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

16-1384669-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384669
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384669
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 17234
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.7C>T
  hgvsp: ENSP00000324510.5:p.Pro3Ser
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+919C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+919C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+919C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.165C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-99C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+919C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+919C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9953
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35043
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33480
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro3Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

16-1384673-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384673
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384673
    reference: chr 16
allele count: 2
allele frequency: 1.144557628476594e-4
allele num: 17474
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+923G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.169G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.11G>A
  hgvsp: ENSP00000324510.5:p.Arg4Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+923G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+923G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+923G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-95G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+923G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34298
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3789
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11201
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1366
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32926
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1137
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg4Gln
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

16-1384678-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384678
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384678
    reference: chr 16
allele count: 1
allele frequency: 5.65482922415743e-5
allele num: 17684
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-90G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+928G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.16G>A
  hgvsp: ENSP00000324510.5:p.Ala6Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+928G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.174G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+928G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+928G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+928G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33727
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11922
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3819
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2096
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31995
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala6Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

16-1384680-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384680
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384680
    reference: chr 16
allele count: 1
allele frequency: 5.623031938821413e-5
allele num: 17784
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+930A>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.176A>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.18A>T
  hgvsp: ENST00000324385.5:c.18A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+930A>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+930A>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+930A>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-88A>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+930A>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33497
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12387
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1749
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4415
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10445
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala6Ala
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-1384681-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384681
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384681
    reference: chr 16
allele count: 1
allele frequency: 5.609783462358353e-5
allele num: 17826
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+931G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-87G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.19G>C
  hgvsp: ENSP00000324510.5:p.Ala7Pro
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+931G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.177G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+931G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+931G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+931G>C
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3869
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12628
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33331
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1329
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1553
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala7Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP

16-1384689-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384689
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384689
    reference: chr 16
allele count: 2
allele frequency: 1.111481604979438e-4
allele num: 17994
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+939A>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+939A>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+939A>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+939A>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-79A>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.27A>T
  hgvsp: ENST00000324385.5:c.27A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+939A>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.185A>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13862
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3870
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32345
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30983
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1366
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4426
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1096
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1740
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala9Ala
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

16-1384691-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384691
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384691
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 17972
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+941C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+941C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.187C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+941C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.29C>T
  hgvsp: ENSP00000324510.5:p.Ala10Val
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+941C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-77C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+941C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3851
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2079
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14056
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30678
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4386
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala10Val
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP

16-1384711-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384711
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384711
    reference: chr 16
allele count: 37
allele frequency: 2.017008286088094e-3
allele num: 18344
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.49C>T
  hgvsp: ENSP00000324510.5:p.His17Tyr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+961C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.207C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+961C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+961C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-57C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+961C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+961C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3961
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31009
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15229
  bin: 7.5e0
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1119
  bin: 6.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30006
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1693
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 2.75e1
  variant carriers: 5
hgvs: p.His17Tyr
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD

16-1384715-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384715
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384715
    reference: chr 16
allele count: 19
allele frequency: 1.027916035490154e-3
allele num: 18484
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-53T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+965T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.211T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+965T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+965T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.53T>C
  hgvsp: ENSP00000324510.5:p.Leu18Pro
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+965T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+965T>C
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3978
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14816
  bin: 7.5e0
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 31243
  bin: 2.5e0
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 1.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1427
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 2.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 12624
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu18Pro
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

16-1384716-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384716
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384716
    reference: chr 16
allele count: 1
allele frequency: 5.402485143165857e-5
allele num: 18510
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.212G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+966G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+966G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.54G>A
  hgvsp: ENST00000324385.5:c.54G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+966G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-52G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+966G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+966G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14479
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31513
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4578
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12296
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30596
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu18Leu
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

16-1384735-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384735
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384735
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 18064
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-33G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+985G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+985G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+985G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.231G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.73G>A
  hgvsp: ENSP00000324510.5:p.Ala25Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+985G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+985G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34418
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9956
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32322
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1297
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2568
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala25Thr
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

16-1384739-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384739
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384739
    reference: chr 16
allele count: 1
allele frequency: 5.515111405250386e-5
allele num: 18132
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+989G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+989G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.77G>C
  hgvsp: ENSP00000324510.5:p.Gly26Ala
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+989G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-29G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+989G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+989G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.235G>C
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34869
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3838
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32879
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4492
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Gly26Ala
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

16-1384741-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384741
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384741
    reference: chr 16
allele count: 4
allele frequency: 2.203856749311295e-4
allele num: 18150
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+991G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.237G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+991G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+991G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+991G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.79G>A
  hgvsp: ENSP00000324510.5:p.Ala27Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-27G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+991G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34939
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9077
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32952
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1165
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6866
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2315
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala27Thr
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

16-1384746-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384746
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384746
    reference: chr 16
allele count: 1
allele frequency: 5.510856387082553e-5
allele num: 18146
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+996C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.242C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-22C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+996C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.84C>G
  hgvsp: ENSP00000324510.5:p.Ile28Met
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+996C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+996C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+996C>G
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35253
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8257
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33218
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4516
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6218
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile28Met
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP

16-1384757-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384757
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384757
    reference: chr 16
allele count: 1
allele frequency: 5.524251463926638e-5
allele num: 18102
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+1007G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.95G>A
  hgvsp: ENSP00000324510.5:p.Arg32Gln
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.253G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-11G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+1007G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+1007G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+1007G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+1007G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6741
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35519
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 886
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg32Gln
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-1384783-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384783
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384783
    reference: chr 16
allele count: 1
allele frequency: 5.681172594023406e-5
allele num: 17602
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+1033G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+1033G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+1033G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-11+26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+1033G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.95+26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.253+26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+1033G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34299
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3357
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4125
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2760
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1174
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/16-1384788-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384788
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384788
    reference: chr 16
allele count: 64
allele frequency: 3.6857866850956e-3
allele num: 17364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+1038C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+1038C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+1038C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.95+31C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-11+31C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.253+31C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+1038C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+1038C>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 1.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 7.5e0
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 33678
  bin: 2.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 28765
  bin: 7.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 9.75e1
  variant carriers: 62
genotype quality: GenotypeQuality
  all individuals: 5368
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1315
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 7.75e1
  variant carriers: 2
num of homozygotes: 1
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

16-1384798-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384798
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384798
    reference: chr 16
allele count: 4
allele frequency: 2.328830926874709e-4
allele num: 17176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.253+41C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+1048C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+1048C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-11+41C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.95+41C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+1048C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+1048C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+1048C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4076
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27308
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3334
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6337
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1965
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum

16-1384803-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1384803
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1384803
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 17072
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-11+46G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-11+1053G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.112+1053G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-11+1053G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-11+1053G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.253+46G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-11+1053G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.95+46G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4153
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32908
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1608
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25670
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7711
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 904
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 3.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

16-1388490-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388490
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388490
    reference: chr 16
allele count: 1
allele frequency: 1.32034117615992e-5
allele num: 75738
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-10-51C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.254-51C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.96-51C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-10-51C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-10-51C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.-10-51C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.113-51C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-10-51C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-10-51C>G
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4908
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17994
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3750
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18737
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2717
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11793
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 924
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5120
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1244
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

16-1388490-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388490
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388490
    reference: chr 16
allele count: 4
allele frequency: 5.281364704639679e-5
allele num: 75738
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.113-51C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.96-51C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-10-51C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-10-51C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-10-51C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.254-51C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.-10-51C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-10-51C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-10-51C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3750
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18737
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17994
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4908
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1244
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5964
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11793
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4042
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2717
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 924
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP

16-1388491-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388491
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388491
    reference: chr 16
allele count: 4
allele frequency: 5.256518082422203e-5
allele num: 76096
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-10-50G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.96-50G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-10-50G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-10-50G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.-10-50G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-10-50G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-10-50G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.254-50G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.113-50G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17941
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18707
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6043
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3737
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9100
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2890
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2676
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5931
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13099
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3972
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/16-1388505-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388505
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388504
    reference: chr 16
allele count: 1
allele frequency: 1.269325480439694e-5
allele num: 78782
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.-10-35delC
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-10-35delC
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-10-35delC
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-10-35delC
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-10-35delC
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.96-35delC
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-10-35delC
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.113-35delC
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.254-35delC
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3502
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17979
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16990
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14025
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2646
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6956
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 928
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16655
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: AC
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

16-1388506-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388506
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388506
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 78692
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.-10-35C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-10-35C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.96-35C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-10-35C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-10-35C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.113-35C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-10-35C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-10-35C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.254-35C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17868
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16769
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4863
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1939
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

16-1388507-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388507
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388507
    reference: chr 16
allele count: 1
allele frequency: 1.260398285858331e-5
allele num: 79340
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.-10-34G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-10-34G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-10-34G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-10-34G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.113-34G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.254-34G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-10-34G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-10-34G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.96-34G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17911
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15977
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2249
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17254
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4557
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

16-1388515-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388515
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388515
    reference: chr 16
allele count: 3
allele frequency: 3.663719407942944e-5
allele num: 81884
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.96-26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.-10-26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.113-26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-10-26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-10-26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.254-26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-10-26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-10-26G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-10-26G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20469
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12335
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 22073
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP

16-1388515-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388515
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388515
    reference: chr 16
allele count: 8
allele frequency: 9.769918421181183e-5
allele num: 81884
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.96-26G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-10-26G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-10-26G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.254-26G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.-10-26G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-10-26G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-10-26G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.113-26G>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-10-26G>C
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12335
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20469
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4026
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22073
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17011
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: G
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff

16-1388519-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388519
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388519
    reference: chr 16
allele count: 7
allele frequency: 8.442482572303833e-5
allele num: 82914
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-10-22C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.-10-22C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-10-22C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.254-22C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-10-22C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.113-22C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-10-22C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-10-22C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.96-22C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16648
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22249
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10965
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2423
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

16-1388520-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388520
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388520
    reference: chr 16
allele count: 3
allele frequency: 3.555681979803727e-5
allele num: 84372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.-10-21G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.113-21G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.96-21G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-10-21G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.254-21G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-10-21G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-10-21G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-10-21G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-10-21G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16373
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23913
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9763
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4149
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

16-1388521-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388521
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388521
    reference: chr 16
allele count: 3
allele frequency: 3.527502763210498e-5
allele num: 85046
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-10-20G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.-10-20G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.96-20G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-10-20G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-10-20G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-10-20G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.254-20G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.113-20G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-10-20G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5024
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24452
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3337
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2834
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3960
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/16-1388528-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388528
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388528
    reference: chr 16
allele count: 1
allele frequency: 1.139211665527455e-5
allele num: 87780
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-10-13C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-10-13C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.113-13C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-10-13C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-10-13C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.-10-13C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-10-13C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.254-13C>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.96-13C>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15039
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5707
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7736
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2861
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15641
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3107
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

16-1388530-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388530
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388530
    reference: chr 16
allele count: 1
allele frequency: 1.129841370271614e-5
allele num: 88508
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.113-11C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-10-11C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-10-11C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-10-11C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.-10-11C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.254-11C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-10-11C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-10-11C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.96-11C>G
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7468
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14793
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5890
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2988
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1131
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1427
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum

16-1388531-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388531
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388531
    reference: chr 16
allele count: 2
allele frequency: 2.24804981678394e-5
allele num: 88966
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.96-10T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-10-10T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.254-10T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-10-10T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-10-10T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.-10-10T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-10-10T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.113-10T>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-10-10T>C
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27091
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14671
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2743
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29193
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

16-1388532-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388532
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388532
    reference: chr 16
allele count: 1
allele frequency: 1.122510832229531e-5
allele num: 89086
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-10-9C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.96-9C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.254-9C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-10-9C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-10-9C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-10-9C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.-10-9C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.113-9C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-10-9C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14529
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27029
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7279
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2710
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1131
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/16-1388544-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388544
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388544
    reference: chr 16
allele count: 8
allele frequency: 8.965594530987336e-5
allele num: 89230
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-7A>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-7A>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-7A>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.-7A>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.257A>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.116A>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.99A>C
  hgvsp: ENST00000324385.5:c.99A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-7A>C
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-7A>C
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 4996
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7261
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24210
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7277
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2667
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1775
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2418
  bin: 4.75e1
  variant carriers: 1
hgvs: p.Ser33Ser
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

16-1388545-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388545
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388545
    reference: chr 16
allele count: 1
allele frequency: 1.073675621121347e-5
allele num: 93138
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.258C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.100C>T
  hgvsp: ENSP00000324510.5:p.Pro34Ser
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-6C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-6C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.-6C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-6C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-6C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-6C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.117C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6519
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12697
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24909
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10005
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2164
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1222
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2239
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro34Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

16-1388547-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388547
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388547
    reference: chr 16
allele count: 4
allele frequency: 4.233879503789322e-5
allele num: 94476
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.260C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-4C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-4C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.119C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-4C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.-4C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.102C>T
  hgvsp: ENST00000324385.5:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-4C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-4C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26291
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5737
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10855
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1748
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1868
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro34Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD

16-1388548-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388548
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388548
    reference: chr 16
allele count: 1
allele frequency: 1.05623389243314e-5
allele num: 94676
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.261G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-3G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-3G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-3G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.103G>A
  hgvsp: ENSP00000324510.5:p.Ala35Thr
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.-3G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-3G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-3G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.120G>A
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10892
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26547
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5638
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11918
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 921
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala35Thr
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

16-1388549-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388549
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388549
    reference: chr 16
allele count: 1
allele frequency: 1.05311933948355e-5
allele num: 94956
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.121C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.-2C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.104C>G
  hgvsp: ENSP00000324510.5:p.Ala35Gly
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.262C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.-2C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.-2C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.-2C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.-2C>G
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.-2C>G
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11932
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5674
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala35Gly
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS

16-1388555-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388555
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388555
    reference: chr 16
allele count: 1
allele frequency: 1.049339965161913e-5
allele num: 95298
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.5C>T
  hgvsp: ENSP00000380626.1:p.Ser2Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.5C>T
  hgvsp: ENSP00000457644.1:p.Ser2Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.5C>T
  hgvsp: ENSP00000409533.2:p.Ser2Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.5C>T
  hgvsp: ENSP00000458134.1:p.Ser2Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.127C>T
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.5C>T
  hgvsp: ENSP00000380625.2:p.Ser2Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.5C>T
  hgvsp: ENSP00000407242.3:p.Ser2Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.110C>T
  hgvsp: ENSP00000324510.5:p.Ser37Leu
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.268C>T
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11746
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5658
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27341
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10503
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser37Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum

16-1388556-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388556
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388556
    reference: chr 16
allele count: 9
allele frequency: 9.496074955684984e-5
allele num: 94776
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.269G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.6G>A
  hgvsp: ENST00000421665.2:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.128G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.6G>A
  hgvsp: ENST00000397488.2:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.6G>A
  hgvsp: ENST00000397489.1:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.6G>A
  hgvsp: ENST00000562208.1:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.6G>A
  hgvsp: ENST00000568887.1:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.111G>A
  hgvsp: ENST00000324385.5:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.6G>A
  hgvsp: ENST00000426824.3:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26663
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10317
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6010
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11983
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser37Ser
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS

16-1388565-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 1388565
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 1388565
    reference: chr 16
allele count: 1
allele frequency: 1.057373062363863e-5
allele num: 94574
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380626
  ensembl transcript: ENST00000397489
  gene symbol: BAIAP3
  hgvsc: ENST00000397489.1:c.15G>A
  hgvsp: ENST00000397489.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000567825
  gene symbol: BAIAP3
  hgvsc: ENST00000567825.1:n.278G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000458134
  ensembl transcript: ENST00000562208
  gene symbol: BAIAP3
  hgvsc: ENST00000562208.1:c.15G>A
  hgvsp: ENST00000562208.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000380625
  ensembl transcript: ENST00000397488
  gene symbol: BAIAP3
  hgvsc: ENST00000397488.2:c.15G>A
  hgvsp: ENST00000397488.2:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000407242
  ensembl transcript: ENST00000426824
  gene symbol: BAIAP3
  hgvsc: ENST00000426824.3:c.15G>A
  hgvsp: ENST00000426824.3:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000324510
  ensembl transcript: ENST00000324385
  gene symbol: BAIAP3
  hgvsc: ENST00000324385.5:c.120G>A
  hgvsp: ENST00000324385.5:c.120G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000409533
  ensembl transcript: ENST00000421665
  gene symbol: BAIAP3
  hgvsc: ENST00000421665.2:c.15G>A
  hgvsp: ENST00000421665.2:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000007516
  ensembl transcript: ENST00000565665
  gene symbol: BAIAP3
  hgvsc: ENST00000565665.1:n.137G>A
  variant of: http://identifiers.org/hgnc/948
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000007516
  ensembl protein: ENSP00000457644
  ensembl transcript: ENST00000568887
  gene symbol: BAIAP3
  hgvsc: ENST00000568887.1:c.15G>A
  hgvsp: ENST00000568887.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/948
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10115
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6354
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12084
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu40Leu
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 4034
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2601
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4867
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4623
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5406
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11664
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23697
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507068149621726e-5
allele num: 66354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.357226e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.085e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.679e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.355e0

QD
type: SiteQuality
SIO_000300: 8.199999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -7.16e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.952e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.38e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.663703131039814e-5
allele num: 10348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.039139473922083e-5
allele num: 66378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 7.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.93e-1

QD
type: SiteQuality
SIO_000300: 1.069e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

FS
type: SiteQuality
SIO_000300: 1.111e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.3e-1

DP
type: SiteQuality
SIO_000300: 2.357953e6

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505978735580254e-5
allele num: 66402
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.357e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.321e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.14e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
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SIO_000300: 3.77e0

DP
type: SiteQuality
SIO_000300: 2.35813e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.78e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504936190705514e-5
allele num: 66448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.646922631680494e-5
allele num: 10366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e0

MQ
type: SiteQuality
SIO_000300: 5.701e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.19e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.293e-1

QD
type: SiteQuality
SIO_000300: 1.491e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.85e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.93e-1

DP
type: SiteQuality
SIO_000300: 2.359568e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504664459825459e-5
allele num: 66460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.43e-1

QD
type: SiteQuality
SIO_000300: 1.263e1

MQ
type: SiteQuality
SIO_000300: 5.918e1

FS
type: SiteQuality
SIO_000300: 4.599e0

DP
type: SiteQuality
SIO_000300: 2.358123e6

MQRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.273e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.99e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.24e0

MQRankSum
type: SiteQuality
SIO_000300: 4.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.97e0

QD
type: SiteQuality
SIO_000300: 1.109e1

MQ
type: SiteQuality
SIO_000300: 5.919e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -9.03e-1

DP
type: SiteQuality
SIO_000300: 2.356466e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21197430614471e-4
allele num: 16502
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66464
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.979e1

MQRankSum
type: SiteQuality
SIO_000300: 4.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 6.072e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.21e-1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.356277e6

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.504709741490866e-5
allele num: 66458
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.68e-1

MQ
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.02e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66454
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.474635163307853e-4
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.103e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.15e-1

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.8e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 5.7e-1

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10354
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South Asian
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East Asian
type: Population
allele count: 3
allele frequency: 3.474635163307853e-4
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66454
num of homozygotes: 0

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
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SIO_000300: 5.96e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.51e-1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 7.17e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4026
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10896
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504890895410083e-5
allele num: 66450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.377e1

MQRankSum
type: SiteQuality
SIO_000300: 3.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.34e-1

DP
type: SiteQuality
SIO_000300: 2.351019e6

MQ
type: SiteQuality
SIO_000300: 5.93e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
all individuals: 318
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variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504981488727689e-5
allele num: 66446
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.199999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

DP
type: SiteQuality
SIO_000300: 2.349783e6

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

VQSLOD
type: SiteQuality
SIO_000300: -1.081e-1

FS
type: SiteQuality
SIO_000300: 1.888e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.69e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 23703
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505117399157134e-5
allele num: 66440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 5.23e0

QD
type: SiteQuality
SIO_000300: 1.496e1

MQ
type: SiteQuality
SIO_000300: 5.968e1

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

DP
type: SiteQuality
SIO_000300: 2.346068e6

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

FS
type: SiteQuality
SIO_000300: 4.935e0

GenotypeQuality
all individuals: 304
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4792
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variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505253334136135e-5
allele num: 66434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.553e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

MQRankSum
type: SiteQuality
SIO_000300: -8.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

DP
type: SiteQuality
SIO_000300: 2.345267e6

VQSLOD
type: SiteQuality
SIO_000300: 4.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.13e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.44e1

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 730
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.011141222523336e-5
allele num: 66420
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.773e1

VQSLOD
type: SiteQuality
SIO_000300: -2.004e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.601e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.87e-1

DP
type: SiteQuality
SIO_000300: 2.344856e6

MQRankSum
type: SiteQuality
SIO_000300: -1.46e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

FS
type: SiteQuality
SIO_000300: 7.845e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.92e-1

GenotypeQuality
all individuals: 4569
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5041
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4752
bin: 7.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 340
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variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.318034306907742e-4
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212415130940834e-4
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.011141222523336e-5
allele num: 66420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.53e-1

QD
type: SiteQuality
SIO_000300: 1.589e1

VQSLOD
type: SiteQuality
SIO_000300: 4.74e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.03e-2

DP
type: SiteQuality
SIO_000300: 2.344836e6

GenotypeQuality
all individuals: 2604
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 65

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 5041
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 48
allele frequency: 7.226738934056008e-4
allele num: 66420
num of homozygotes: 2

Latino
type: Population
allele count: 5
allele frequency: 4.335761359694763e-4
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.311258278145695e-3
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 6.668283220174588e-4
allele num: 16496
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.03e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

DP
type: SiteQuality
SIO_000300: 2.344836e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-2

QD
type: SiteQuality
SIO_000300: 1.589e1

VQSLOD
type: SiteQuality
SIO_000300: 4.74e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 285

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3008
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.032879682042635e-5
allele num: 66424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 20
allele frequency: 1.734304543877905e-3
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

African
type: Population
allele count: 258
allele frequency: 2.495164410058027e-2
allele num: 10340
num of homozygotes: 1

Other
type: Population
allele count: 2
allele frequency: 2.207505518763797e-3
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.44e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

FS
type: SiteQuality
SIO_000300: 7.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.42e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.34705e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.3e-3

QD
type: SiteQuality
SIO_000300: 1.318e1

GenotypeQuality
all individuals: 704
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5017
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 23694
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GenotypeQuality
all individuals: 813
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66424
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158480074142725e-4
allele num: 8632
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.028e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.53e-1

DP
type: SiteQuality
SIO_000300: 2.344226e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 2.43e0

MQ
type: SiteQuality
SIO_000300: 5.848e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.85e-1

QD
type: SiteQuality
SIO_000300: 1.499e1

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1102
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GenotypeQuality
all individuals: 8516
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GenotypeQuality
all individuals: 4576
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

MQ
type: SiteQuality
SIO_000300: 5.848e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.85e-1

FS
type: SiteQuality
SIO_000300: 2.028e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

VQSLOD
type: SiteQuality
SIO_000300: 2.43e0

QD
type: SiteQuality
SIO_000300: 1.499e1

DP
type: SiteQuality
SIO_000300: 2.344226e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.43e-1

GenotypeQuality
all individuals: 1566
bin: 9.25e1
variant carriers: 1458

GenotypeQuality
all individuals: 355
bin: 5.25e1
variant carriers: 305

GenotypeQuality
all individuals: 52
bin: 1.75e1
variant carriers: 34

GenotypeQuality
all individuals: 270
bin: 4.75e1
variant carriers: 234

GenotypeQuality
all individuals: 1526
bin: 6.75e1
variant carriers: 749

GenotypeQuality
all individuals: 46
bin: 1.25e1
variant carriers: 25

GenotypeQuality
all individuals: 1377
bin: 8.25e1
variant carriers: 1162

GenotypeQuality
all individuals: 177
bin: 4.25e1
variant carriers: 128

GenotypeQuality
all individuals: 240
bin: 2.25e1
variant carriers: 64

GenotypeQuality
all individuals: 47930
bin: 9.75e1
variant carriers: 47235

European (Non-Finnish)
type: Population
allele count: 48380
allele frequency: 7.295593690623398e-1
allele num: 66314
num of homozygotes: 17634

Other
type: Population
allele count: 660
allele frequency: 7.284768211920529e-1
allele num: 906
num of homozygotes: 251

African
type: Population
allele count: 4296
allele frequency: 4.164404808065141e-1
allele num: 10316
num of homozygotes: 891

European (Finnish)
type: Population
allele count: 4582
allele frequency: 6.946634323832626e-1
allele num: 6596
num of homozygotes: 1569

Latino
type: Population
allele count: 7229
allele frequency: 6.299233182293482e-1
allele num: 11476
num of homozygotes: 2270

South Asian
type: Population
allele count: 12225
allele frequency: 7.41448326055313e-1
allele num: 16488
num of homozygotes: 4575

East Asian
type: Population
allele count: 8164
allele frequency: 9.455640491081769e-1
allele num: 8634
num of homozygotes: 3853

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.320000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.17e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

DP
type: SiteQuality
SIO_000300: 2.705752e6

QD
type: SiteQuality
SIO_000300: 2.805e1

VQSLOD
type: SiteQuality
SIO_000300: 4.52e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

GenotypeQuality
all individuals: 1566
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1332
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3290
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1377
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158211721102618e-4
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66314
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.52e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.705752e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.320000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.17e0

QD
type: SiteQuality
SIO_000300: 2.805e1

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
all individuals: 2810
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 915
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 787
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2770
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1388
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2265
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24974
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519756838905775e-5
allele num: 65800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.859579e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.429e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.68e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 6.76e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 3906
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3338
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1378
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5636
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4833
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6715
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2961
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1220
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2428
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.799718409010911e-5
allele num: 11364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10164
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16344
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.72e-1

QD
type: SiteQuality
SIO_000300: 1.223e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.848e0

MQ
type: SiteQuality
SIO_000300: 5.883e1

DP
type: SiteQuality
SIO_000300: 1.773655e6

GenotypeQuality
all individuals: 2846
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16349
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2919
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3980
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 910
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1403
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5007
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2190
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5504
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6711
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.11545988258317e-5
allele num: 16352
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.269e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.09e-1

DP
type: SiteQuality
SIO_000300: 1.762915e6

QD
type: SiteQuality
SIO_000300: 1.142e1

MQRankSum
type: SiteQuality
SIO_000300: 4.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.43e-1

MQ
type: SiteQuality
SIO_000300: 5.907e1

GenotypeQuality
all individuals: 6382
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2312
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1860
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1375
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 909
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7595
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5292
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4828
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6021
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.230163611760364e-4
allele num: 16258
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64946
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.62e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 8.43e-1

DP
type: SiteQuality
SIO_000300: 1.729356e6

QD
type: SiteQuality
SIO_000300: 1.142e1

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2923
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 460
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7680
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 6.41025641025641e-4
allele num: 1560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 544
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6218
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.243e1

MQRankSum
type: SiteQuality
SIO_000300: -1.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

DP
type: SiteQuality
SIO_000300: 3.26191e5

ClippingRankSum
type: SiteQuality
SIO_000300: 4.52e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.145e-1

FS
type: SiteQuality
SIO_000300: 3.552e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.23e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 482
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 55
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2893
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3460
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3857
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7706
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.05e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.33953e5

VQSLOD
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 1.932e1

GenotypeQuality
all individuals: 136
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1047
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3988
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 550
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.011e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

VQSLOD
type: SiteQuality
SIO_000300: 5.610000000000001e-1

DP
type: SiteQuality
SIO_000300: 3.48482e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.829999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.56e-1

QD
type: SiteQuality
SIO_000300: 1.449e1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.56e-1

GenotypeQuality
all individuals: 237
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1467
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4212
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8585
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 307
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1716
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7820
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.634e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.13e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

DP
type: SiteQuality
SIO_000300: 3.84613e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.722e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.55e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7848
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1770
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996703626011388e-4
allele num: 6674
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.167e0

VQSLOD
type: SiteQuality
SIO_000300: -1.371e0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

DP
type: SiteQuality
SIO_000300: 3.94768e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.92e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

QD
type: SiteQuality
SIO_000300: 9.99e0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9587
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.476232654266312e-4
allele num: 6774
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1820
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.536e1

VQSLOD
type: SiteQuality
SIO_000300: -1.829e0

DP
type: SiteQuality
SIO_000300: 4.00412e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.95e-1

GenotypeQuality
all individuals: 123
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 483
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variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 394
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.463271875914545e-4
allele num: 6834
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.03933e5

MQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.889e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e-1

QD
type: SiteQuality
SIO_000300: 5.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.67e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.57e0

GenotypeQuality
all individuals: 139
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10900
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variant carriers: 0

GenotypeQuality
all individuals: 222
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 731
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1091
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1844
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.592356687898089e-3
allele num: 628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7874
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.142e0

QD
type: SiteQuality
SIO_000300: 9.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.05975e5

GenotypeQuality
all individuals: 217
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 820
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GenotypeQuality
all individuals: 11852
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variant carriers: 0

GenotypeQuality
all individuals: 74
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GenotypeQuality
all individuals: 306
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variant carriers: 0

GenotypeQuality
all individuals: 435
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variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.25e1
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GenotypeQuality
all individuals: 487
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variant carriers: 0

GenotypeQuality
all individuals: 54
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variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 2
allele frequency: 1.075268817204301e-3
allele num: 1860
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6960
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 420
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.313e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

DP
type: SiteQuality
SIO_000300: 4.14452e5

VQSLOD
type: SiteQuality
SIO_000300: -8.135e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.43e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.45e-1

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11783
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1901
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variant carriers: 0

GenotypeQuality
all individuals: 787
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variant carriers: 1

GenotypeQuality
all individuals: 77
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GenotypeQuality
all individuals: 123
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1844
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6962
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.463e0

QD
type: SiteQuality
SIO_000300: 4.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.638e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.45e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

DP
type: SiteQuality
SIO_000300: 4.16171e5

GenotypeQuality
all individuals: 920
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 489
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 39
bin: 5.75e1
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GenotypeQuality
all individuals: 176
bin: 3.25e1
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GenotypeQuality
all individuals: 124
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variant carriers: 1

GenotypeQuality
all individuals: 816
bin: 9.75e1
variant carriers: 33

GenotypeQuality
all individuals: 139
bin: 9.25e1
variant carriers: 2

African
type: Population
allele count: 34
allele frequency: 1.824034334763949e-2
allele num: 1864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.164502164502165e-3
allele num: 462
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.527805864509606e-4
allele num: 7912
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7180
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.15e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.9e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.28839e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.227e1

GenotypeQuality
all individuals: 809
bin: 9.75e1
variant carriers: 23

GenotypeQuality
all individuals: 4585
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variant carriers: 5

GenotypeQuality
all individuals: 1440
bin: 1.75e1
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GenotypeQuality
all individuals: 22
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GenotypeQuality
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GenotypeQuality
all individuals: 30350
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GenotypeQuality
all individuals: 441
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GenotypeQuality
all individuals: 948
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 141
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variant carriers: 3

GenotypeQuality
all individuals: 126
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GenotypeQuality
all individuals: 1126
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variant carriers: 7

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 5.0e-2
allele num: 80
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 458
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7920
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.06043956043956e-3
allele num: 7280
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.101e0

DP
type: SiteQuality
SIO_000300: 4.27947e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

QD
type: SiteQuality
SIO_000300: 1.117e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.09e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.6e0

GenotypeQuality
all individuals: 61
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 973
bin: 1.25e1
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GenotypeQuality
all individuals: 139
bin: 9.25e1
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GenotypeQuality
all individuals: 1445
bin: 2.5e0
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GenotypeQuality
all individuals: 27
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GenotypeQuality
all individuals: 34
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GenotypeQuality
all individuals: 1478
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GenotypeQuality
all individuals: 487
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GenotypeQuality
all individuals: 438
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GenotypeQuality
all individuals: 1115
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GenotypeQuality
all individuals: 787
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 698
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1880
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.368738023542294e-4
allele num: 7306
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7918
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.33e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.986e0

MQ
type: SiteQuality
SIO_000300: 5.805e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.59e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.26506e5

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.073e0

QD
type: SiteQuality
SIO_000300: 3.78e0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1107
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7190
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4451
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 416
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7036
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.653e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.13e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQ
type: SiteQuality
SIO_000300: 5.682e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.19e-1

DP
type: SiteQuality
SIO_000300: 3.97251e5

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

QD
type: SiteQuality
SIO_000300: 2.65e0

GenotypeQuality
all individuals: 1468
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1114
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1193
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2322
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6880
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.267427122940431e-4
allele num: 7890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7076
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 172
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.94148e5

VQSLOD
type: SiteQuality
SIO_000300: -2.795e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.02e-1

FS
type: SiteQuality
SIO_000300: 3.511e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.21e-2

QD
type: SiteQuality
SIO_000300: 7.98e0

MQRankSum
type: SiteQuality
SIO_000300: 2.62e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.042e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.81e-1

GenotypeQuality
all individuals: 4513
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 483
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1336
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 310
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 172
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.636978579481398e-4
allele num: 7096
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.23e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.02e-1

QD
type: SiteQuality
SIO_000300: 9.359999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.94e-1

DP
type: SiteQuality
SIO_000300: 3.93981e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.312e0

FS
type: SiteQuality
SIO_000300: 5.6e0

VQSLOD
type: SiteQuality
SIO_000300: -5.994e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

GenotypeQuality
all individuals: 786
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1049
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2363
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1115
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1252
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 172
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1914
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.40607424071991e-4
allele num: 7112
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

QD
type: SiteQuality
SIO_000300: 4.7e0

MQRankSum
type: SiteQuality
SIO_000300: 9.78e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.269e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.340000000000001e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.89288e5

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 954
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2715
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4489
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5066
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33258
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1108
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 140
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.413227812323346e-4
allele num: 7076
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 406
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1924
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.73e0

FS
type: SiteQuality
SIO_000300: 4.612e0

DP
type: SiteQuality
SIO_000300: 3.79618e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.64e-2

QD
type: SiteQuality
SIO_000300: 7.2e0

VQSLOD
type: SiteQuality
SIO_000300: -1.827e0

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-2

GenotypeQuality
all individuals: 591
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3933
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30592
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1089
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.276487107480215e-4
allele num: 7834
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6850
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.13e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.067e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 1.325e1

MQ
type: SiteQuality
SIO_000300: 5.925e1

DP
type: SiteQuality
SIO_000300: 3.50007e5

GenotypeQuality
all individuals: 322
bin: 3.25e1
variant carriers: 4

GenotypeQuality
all individuals: 102
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 232
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 711
bin: 1.75e1
variant carriers: 4

GenotypeQuality
all individuals: 283
bin: 2.75e1
variant carriers: 5

GenotypeQuality
all individuals: 437
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3633
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 309
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1056
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 138
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2186
bin: 2.25e1
variant carriers: 3

African
type: Population
allele count: 62
allele frequency: 3.757575757575757e-2
allele num: 1650
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6692
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.564102564102564e-3
allele num: 390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.277465508431272e-4
allele num: 7828
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 596
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.244e1

MQRankSum
type: SiteQuality
SIO_000300: 3.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.72e-1

DP
type: SiteQuality
SIO_000300: 3.44505e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.96e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.42e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1489
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 477
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variant carriers: 1

GenotypeQuality
all individuals: 1037
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 792
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 146
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6618
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 2.564102564102564e-3
allele num: 1560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7814
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.83e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.377e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.409999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.119e1

DP
type: SiteQuality
SIO_000300: 3.37784e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeQuality
all individuals: 2988
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1676
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1008
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7796
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.58e-2

QD
type: SiteQuality
SIO_000300: 1.183e1

DP
type: SiteQuality
SIO_000300: 3.37908e5

GenotypeQuality
all individuals: 5934
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4042
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 1
allele frequency: 1.66333998669328e-4
allele num: 6012
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6696
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7682
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3094
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44212
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.209e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.19e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

FS
type: SiteQuality
SIO_000300: 1.278e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.57e-1

DP
type: SiteQuality
SIO_000300: 7.84486e5

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6012
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.905233012236397e-4
allele num: 7682
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.493428912783751e-4
allele num: 6696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44212
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3094
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.19e-2

QD
type: SiteQuality
SIO_000300: 1.209e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e-1

FS
type: SiteQuality
SIO_000300: 1.278e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

DP
type: SiteQuality
SIO_000300: 7.84486e5

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7806
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.507956543298923e-5
allele num: 44366
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.978850163836759e-4
allele num: 6714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3100
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6018
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.944e1

FS
type: SiteQuality
SIO_000300: 6.345e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-2

DP
type: SiteQuality
SIO_000300: 7.90582e5

QD
type: SiteQuality
SIO_000300: 1.172e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.94e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6216
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.188950179493915e-5
allele num: 45684
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.5402e5

BaseQRankSum
type: SiteQuality
SIO_000300: -9.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.929e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.71e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.65e0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6236
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45670
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8296
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7784
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.73e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.122e0

DP
type: SiteQuality
SIO_000300: 8.60091e5

QD
type: SiteQuality
SIO_000300: 6.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.231e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3292
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7816
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6948
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.164958061509786e-4
allele num: 8584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6248
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.95e0

FS
type: SiteQuality
SIO_000300: 3.114e0

QD
type: SiteQuality
SIO_000300: 3.57e0

DP
type: SiteQuality
SIO_000300: 8.72718e5

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.289e0

MQ
type: SiteQuality
SIO_000300: 5.922e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 207
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8050
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.377551020408164e-5
allele num: 47040
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9366
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 588
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

VQSLOD
type: SiteQuality
SIO_000300: 5.97e0

QD
type: SiteQuality
SIO_000300: 1.366e1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

DP
type: SiteQuality
SIO_000300: 9.29416e5

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 548
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47040
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8050
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 1.133465570983281e-3
allele num: 7058
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.29416e5

MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.83e-1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 5.97e0

QD
type: SiteQuality
SIO_000300: 1.366e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

GenotypeQuality
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bin: 2.25e1
variant carriers: 1

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 545
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GenotypeQuality
all individuals: 705
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.050640634533252e-4
allele num: 9834
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7082
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 8.426019548365353e-5
allele num: 47472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8132
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.87e0

DP
type: SiteQuality
SIO_000300: 9.60201e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.83e-1

FS
type: SiteQuality
SIO_000300: 2.415e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

QD
type: SiteQuality
SIO_000300: 1.241e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.58e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 308
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 578
bin: 7.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 221
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.393922497909116e-4
allele num: 7174
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.160079873533572e-5
allele num: 48076
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.418e0

DP
type: SiteQuality
SIO_000300: 9.78963e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.32e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.65e-1

QD
type: SiteQuality
SIO_000300: 1.253e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.32e0

GenotypeQuality
all individuals: 1868
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 16410
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variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 3.602305475504323e-4
allele num: 8328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3472
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48394
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.249e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.79e-1

FS
type: SiteQuality
SIO_000300: 1.316e0

MQRankSum
type: SiteQuality
SIO_000300: 3.23e-1

DP
type: SiteQuality
SIO_000300: 9.85232e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.54e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.7e0

GenotypeQuality
all individuals: 126
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 70
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 490
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variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49652
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6678
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11326
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.35795763172189e-4
allele num: 7364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.722e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

MQ
type: SiteQuality
SIO_000300: 5.761e1

VQSLOD
type: SiteQuality
SIO_000300: -2.32e0

FS
type: SiteQuality
SIO_000300: 1.911e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.439e0

MQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

DP
type: SiteQuality
SIO_000300: 1.027213e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.03e0

QD
type: SiteQuality
SIO_000300: 1.113e1

GenotypeQuality
all individuals: 29011
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2788
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 290
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variant carriers: 0

GenotypeQuality
all individuals: 647
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GenotypeQuality
all individuals: 587
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variant carriers: 0

GenotypeQuality
all individuals: 160
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variant carriers: 1

GenotypeQuality
all individuals: 501
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.160631383472609e-4
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50014
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6690
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

DP
type: SiteQuality
SIO_000300: 1.035365e6

VQSLOD
type: SiteQuality
SIO_000300: 9.900000000000001e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.03e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.251e0

QD
type: SiteQuality
SIO_000300: 1.506e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.34e-1

GenotypeQuality
all individuals: 288
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 602
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variant carriers: 0

GenotypeQuality
all individuals: 2955
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variant carriers: 0

GenotypeQuality
all individuals: 234
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variant carriers: 0

GenotypeQuality
all individuals: 1398
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variant carriers: 0

GenotypeQuality
all individuals: 665
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variant carriers: 0

GenotypeQuality
all individuals: 655
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GenotypeQuality
all individuals: 163
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variant carriers: 3

GenotypeQuality
all individuals: 1108
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GenotypeQuality
all individuals: 81
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variant carriers: 0

GenotypeQuality
all individuals: 505
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variant carriers: 0

GenotypeQuality
all individuals: 3096
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15376
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11704
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.983111606787222e-5
allele num: 50212
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6724
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.4e-2

MQ
type: SiteQuality
SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.1e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.038468e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.755e0

QD
type: SiteQuality
SIO_000300: 1.314e1

GenotypeQuality
all individuals: 15236
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1422
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 73
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 770
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variant carriers: 0

GenotypeQuality
all individuals: 28871
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6726
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.486082824168364e-5
allele num: 11784
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 646
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.938e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.66e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.31e-1

DP
type: SiteQuality
SIO_000300: 1.041892e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

GenotypeQuality
all individuals: 13594
bin: 2.25e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1268
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.359064963305246e-4
allele num: 7358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6734
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.315886984715146e-4
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.971337579617834e-5
allele num: 50240
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.063215610385422e-5
allele num: 12402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 3.109452736318408e-4
allele num: 3216
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 644
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.58039e2

QD
type: SiteQuality
SIO_000300: 2.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.053e0

VQSLOD
type: SiteQuality
SIO_000300: -5.85e2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.704e0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e-2

MQ
type: SiteQuality
SIO_000300: 5.805e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.1e-3

DP
type: SiteQuality
SIO_000300: 1.070819e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 550
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GenotypeQuality
all individuals: 62
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6998
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3752
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9028
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7744
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.914755102822349e-5
allele num: 52226
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.884e1

VQSLOD
type: SiteQuality
SIO_000300: -1.6e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.308e0

FS
type: SiteQuality
SIO_000300: 4.014e0

DP
type: SiteQuality
SIO_000300: 1.113847e6

MQRankSum
type: SiteQuality
SIO_000300: 8.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.78e-1

GenotypeQuality
all individuals: 13922
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GenotypeQuality
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GenotypeQuality
all individuals: 279
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GenotypeQuality
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GenotypeQuality
all individuals: 63
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GenotypeQuality
all individuals: 925
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GenotypeQuality
all individuals: 32751
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GenotypeQuality
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GenotypeQuality
all individuals: 191
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GenotypeQuality
all individuals: 939
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GenotypeQuality
all individuals: 152
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GenotypeQuality
all individuals: 3925
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GenotypeQuality
all individuals: 213
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.547029702970297e-4
allele num: 12928
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7068
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7848
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.488095238095238e-3
allele num: 672
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.888431468821996e-5
allele num: 52954
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3818
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.143495e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.172e0

MQRankSum
type: SiteQuality
SIO_000300: 3.04e-1

FS
type: SiteQuality
SIO_000300: 2.055e0

VQSLOD
type: SiteQuality
SIO_000300: 4.1e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.55e-1

QD
type: SiteQuality
SIO_000300: 8.77e0

GenotypeQuality
all individuals: 3866
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 66
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 774
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1804
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1672
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13836
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33057
bin: 6.25e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7092
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.884658876743309e-5
allele num: 53060
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3804
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9188
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12988
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.93e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.149253e6

QD
type: SiteQuality
SIO_000300: 7.97e0

FS
type: SiteQuality
SIO_000300: 2.535e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.59e-1

GenotypeQuality
all individuals: 47
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32962
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1642
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13938
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1805
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3917
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.665184730952016e-5
allele num: 13046
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9214
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3828
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7102
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53202
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.54e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.483e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

DP
type: SiteQuality
SIO_000300: 1.147017e6

QD
type: SiteQuality
SIO_000300: 1.568e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.485e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.19e-1

FS
type: SiteQuality
SIO_000300: 6.008e0

GenotypeQuality
all individuals: 363
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 884
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3860
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 89
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1509
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14048
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33295
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9200
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7118
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3796
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.874835951854213e-5
allele num: 53338
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7906
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.43e-1

MQ
type: SiteQuality
SIO_000300: 5.892e1

QD
type: SiteQuality
SIO_000300: 1.071e1

FS
type: SiteQuality
SIO_000300: 8.139999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.78e-1

DP
type: SiteQuality
SIO_000300: 1.148634e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

GenotypeQuality
all individuals: 1350
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1266
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 763
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1594
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1766
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31063
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3736
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14412
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 9.75e1
variant carriers: 8

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9092
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7852
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3756
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7074
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.694787586622477e-4
allele num: 53104
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 664
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.080000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.0e-2

DP
type: SiteQuality
SIO_000300: 1.13882e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.81e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

QD
type: SiteQuality
SIO_000300: 9.970000000000001e0

FS
type: SiteQuality
SIO_000300: 4.347e0