22-18364101-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18364101
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18364101
    reference: chr 22
allele count: 1
allele frequency: 8.347106058329577e-6
allele num: 119802
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2325+2940G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+4543G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2325+2940G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+4543G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+4543G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.881+2940G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+4543G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+4543G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2242-32G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2242-32G>A
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3087
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5677
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6824
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7394
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6921
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3070
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

22-18364104-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18364104
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18364104
    reference: chr 22
allele count: 1
allele frequency: 8.350312301680083e-6
allele num: 119756
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2325+2937G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+4540G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2242-35G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+4540G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+4540G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+4540G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.881+2937G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+4540G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2242-35G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2325+2937G>A
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3026
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3091
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5677
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6915
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5791
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7394
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

22-18364115-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18364115
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18364115
    reference: chr 22
allele count: 2
allele frequency: 1.67319211591875e-5
allele num: 119532
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+4529A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+4529A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2242-46A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+4529A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2325+2926A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+4529A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.881+2926A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+4529A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2242-46A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2325+2926A>G
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4447
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6828
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5675
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3766
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6872
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3091
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6260
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33479
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS

22-18366994-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18366994
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18366994
    reference: chr 22
allele count: 1
allele frequency: 1.234628870561509e-5
allele num: 80996
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1650T>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1650T>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2325+47T>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.881+47T>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1650T>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1650T>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1650T>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2325+47T>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1650T>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1650T>C
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6175
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20185
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11066
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14527
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5744
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7070
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

22-18366996-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18366996
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18366996
    reference: chr 22
allele count: 4
allele frequency: 4.929265046581554e-5
allele num: 81148
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1648C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1648C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2325+45C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2325+45C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1648C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1648C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1648C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1648C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1648C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.881+45C>T
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14508
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20156
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10204
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7053
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2715
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1140
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ

22-18367004-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367004
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367004
    reference: chr 22
allele count: 1
allele frequency: 1.212385732644698e-5
allele num: 82482
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2325+37C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1640C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1640C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1640C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1640C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1640C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2325+37C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.881+37C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1640C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1640C>G
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14367
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5743
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18302
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13436
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14476
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

22-18367011-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367011
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367011
    reference: chr 22
allele count: 1
allele frequency: 1.186295909651704e-5
allele num: 84296
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1633G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1633G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1633G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1633G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1633G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1633G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2325+30G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.881+30G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1633G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2325+30G>A
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14443
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13888
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19560
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3518
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP

22-18367017-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367017
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367017
    reference: chr 22
allele count: 1
allele frequency: 1.137216548775218e-5
allele num: 87934
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1627A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2325+24A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2325+24A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1627A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1627A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1627A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.881+24A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1627A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1627A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1627A>G
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25897
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12670
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10022
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4450
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13564
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2157
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

22-18367024-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367024
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367024
    reference: chr 22
allele count: 2
allele frequency: 2.14320924151825e-5
allele num: 93318
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1620G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1620G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1620G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1620G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1620G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2325+17G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2325+17G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.881+17G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1620G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1620G>A
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5773
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10254
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31909
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10991
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2044
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ

22-18367038-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367038
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367038
    reference: chr 22
allele count: 6
allele frequency: 6.020348778872589e-5
allele num: 99662
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1606A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.881+3A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2325+3A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1606A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1606A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1606A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1606A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2325+3A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1606A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1606A>G
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7374
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36325
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8047
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
hgvs: c.2325+3A>G
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/22-18367041-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367041
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367041
    reference: chr 22
allele count: 13
allele frequency: 1.296939223432699e-4
allele num: 100236
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2325G>T
  hgvsp: ENSP00000391827.2:p.Gln775His
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1603G>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1603G>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1603G>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2325G>T
  hgvsp: ENSP00000207726.7:p.Gln775His
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1603G>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1603G>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1603G>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1603G>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.881G>T
  hgvsp: ENSP00000462531.1:p.Gln294His
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7442
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36242
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7057
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3149
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gln775His
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

22-18367041-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367041
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367041
    reference: chr 22
allele count: 1
allele frequency: 9.976455564866915e-6
allele num: 100236
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1603G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1603G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1603G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2325G>A
  hgvsp: ENST00000207726.7:c.2325G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.881G>A
  hgvsp: ENST00000461307.1:c.881G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2325G>A
  hgvsp: ENST00000414725.2:c.2325G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1603G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1603G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1603G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1603G>A
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36242
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7057
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7442
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 9.75e1
  variant carriers: 1
hgvs: c.2325G>A
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

22-18367051-C-CG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367051
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367052
    reference: chr 22
allele count: 5
allele frequency: 4.892367906066536e-5
allele num: 102200
alternate allele: CG
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2314dupC
  hgvsp: ENSP00000391827.2:p.Arg772ProfsTer68
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1592dupC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1592dupC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2314dupC
  hgvsp: ENSP00000207726.7:p.Arg772ProfsTer68
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1592dupC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1592dupC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.870dupC
  hgvsp: ENSP00000462531.1:p.Arg291ProfsTer68
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1592dupC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1592dupC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1592dupC
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36145
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5732
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38880
  bin: 6.25e1
  variant carriers: 1
hgvs: p.Arg772ProfsTer68
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

22-18367051-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367051
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367051
    reference: chr 22
allele count: 3
allele frequency: 2.935420743639922e-5
allele num: 102200
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.871G>A
  hgvsp: ENSP00000462531.1:p.Arg291Gln
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2315G>A
  hgvsp: ENSP00000207726.7:p.Arg772Gln
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1593G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1593G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1593G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1593G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1593G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2315G>A
  hgvsp: ENSP00000391827.2:p.Arg772Gln
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1593G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1593G>A
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8554
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36145
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5732
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg772Gln
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

22-18367052-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367052
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367052
    reference: chr 22
allele count: 3
allele frequency: 2.920503884270166e-5
allele num: 102722
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1592C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1592C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2314C>T
  hgvsp: ENSP00000391827.2:p.Arg772Trp
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1592C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.870C>T
  hgvsp: ENSP00000462531.1:p.Arg291Trp
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1592C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1592C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2314C>T
  hgvsp: ENSP00000207726.7:p.Arg772Trp
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1592C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1592C>T
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36287
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8740
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5498
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg772Trp
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

22-18367054-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367054
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367054
    reference: chr 22
allele count: 25
allele frequency: 2.403846153846154e-4
allele num: 104000
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1590C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.868C>T
  hgvsp: ENSP00000462531.1:p.Pro290Leu
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1590C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1590C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2312C>T
  hgvsp: ENSP00000207726.7:p.Pro771Leu
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1590C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1590C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2312C>T
  hgvsp: ENSP00000391827.2:p.Pro771Leu
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1590C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1590C>T
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 36736
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8996
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 9.75e1
  variant carriers: 24
hgvs: p.Pro771Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

22-18367054-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367054
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367054
    reference: chr 22
allele count: 68
allele frequency: 6.538461538461538e-4
allele num: 104000
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2312C>A
  hgvsp: ENSP00000391827.2:p.Pro771His
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1590C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2312C>A
  hgvsp: ENSP00000207726.7:p.Pro771His
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1590C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1590C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.868C>A
  hgvsp: ENSP00000462531.1:p.Pro290His
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1590C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1590C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1590C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1590C>A
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 3.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 8996
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36736
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 9.75e1
  variant carriers: 63
hgvs: p.Pro771His
num of homozygotes: 2
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

22-18367055-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367055
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367055
    reference: chr 22
allele count: 1
allele frequency: 9.597113188352943e-6
allele num: 104198
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1589C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1589C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2311C>G
  hgvsp: ENSP00000391827.2:p.Pro771Ala
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1589C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1589C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.867C>G
  hgvsp: ENSP00000462531.1:p.Pro290Ala
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1589C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2311C>G
  hgvsp: ENSP00000207726.7:p.Pro771Ala
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1589C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1589C>G
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36814
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40915
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 957
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro771Ala
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

22-18367056-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367056
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367056
    reference: chr 22
allele count: 1
allele frequency: 9.59471906662573e-6
allele num: 104224
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.866C>G
  hgvsp: ENST00000461307.1:c.866C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2310C>G
  hgvsp: ENST00000414725.2:c.2310C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1588C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1588C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2310C>G
  hgvsp: ENST00000207726.7:c.2310C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1588C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1588C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1588C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1588C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1588C>G
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36692
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40423
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr770Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
reference allele: G
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

22-18367056-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367056
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367056
    reference: chr 22
allele count: 4
allele frequency: 3.837887626650292e-5
allele num: 104224
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1588C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1588C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.866C>A
  hgvsp: ENST00000461307.1:c.866C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1588C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2310C>A
  hgvsp: ENST00000414725.2:c.2310C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1588C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2310C>A
  hgvsp: ENST00000207726.7:c.2310C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1588C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1588C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1588C>A
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36692
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9155
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr770Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

22-18367059-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367059
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367059
    reference: chr 22
allele count: 6
allele frequency: 5.722133211261158e-5
allele num: 104856
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1585C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1585C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1585C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1585C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2307C>T
  hgvsp: ENST00000414725.2:c.2307C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1585C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2307C>T
  hgvsp: ENST00000207726.7:c.2307C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.863C>T
  hgvsp: ENST00000461307.1:c.863C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1585C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1585C>T
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9461
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4818
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro769Pro
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP

22-18367061-G-GGCCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367061
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367065
    reference: chr 22
allele count: 1
allele frequency: 9.510585281418219e-6
allele num: 105146
alternate allele: GGCCT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1582_2241+1583insAGGC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2304_2305insAGGC
  hgvsp: ENSP00000207726.7:p.Pro769ArgfsTer72
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.860_861insAGGC
  hgvsp: ENSP00000462531.1:p.Pro288ArgfsTer72
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1582_*1132+1583insAGGC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1582_2241+1583insAGGC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2304_2305insAGGC
  hgvsp: ENSP00000391827.2:p.Pro769ArgfsTer72
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1582_2241+1583insAGGC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1582_2241+1583insAGGC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1582_2241+1583insAGGC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1582_2241+1583insAGGC
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4706
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36653
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro769ArgfsTer72
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum

22-18367069-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367069
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367069
    reference: chr 22
allele count: 1
allele frequency: 9.444297533149485e-6
allele num: 105884
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1575G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1575G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1575G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1575G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2297G>A
  hgvsp: ENSP00000207726.7:p.Arg766His
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1575G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1575G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2297G>A
  hgvsp: ENSP00000391827.2:p.Arg766His
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1575G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.853G>A
  hgvsp: ENSP00000462531.1:p.Arg285His
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10354
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4321
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5291
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg766His
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD

22-18367070-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367070
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367070
    reference: chr 22
allele count: 2
allele frequency: 1.884232740428098e-5
allele num: 106144
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.852C>T
  hgvsp: ENSP00000462531.1:p.Arg285Cys
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1574C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1574C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1574C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2296C>T
  hgvsp: ENSP00000391827.2:p.Arg766Cys
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1574C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2296C>T
  hgvsp: ENSP00000207726.7:p.Arg766Cys
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1574C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1574C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1574C>T
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4225
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36231
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Arg766Cys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

22-18367070-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367070
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367070
    reference: chr 22
allele count: 10
allele frequency: 9.421163702140489e-5
allele num: 106144
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1574C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2296C>G
  hgvsp: ENSP00000207726.7:p.Arg766Gly
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2296C>G
  hgvsp: ENSP00000391827.2:p.Arg766Gly
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.852C>G
  hgvsp: ENSP00000462531.1:p.Arg285Gly
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1574C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1574C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1574C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1574C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1574C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1574C>G
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36231
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4225
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10472
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg766Gly
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

22-18367075-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367075
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367075
    reference: chr 22
allele count: 1
allele frequency: 9.380863039399625e-6
allele num: 106600
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1569A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1569A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2291A>G
  hgvsp: ENSP00000391827.2:p.Gln764Arg
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1569A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.847A>G
  hgvsp: ENSP00000462531.1:p.Gln283Arg
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1569A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2291A>G
  hgvsp: ENSP00000207726.7:p.Gln764Arg
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1569A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1569A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1569A>G
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36097
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10739
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4038
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2220
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln764Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

http://identifiers.org/exac.variant/22-18367078-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367078
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367078
    reference: chr 22
allele count: 1
allele frequency: 9.376289239770469e-6
allele num: 106652
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.844G>T
  hgvsp: ENSP00000462531.1:p.Gly282Val
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1566G>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1566G>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1566G>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2288G>T
  hgvsp: ENSP00000207726.7:p.Gly763Val
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1566G>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1566G>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1566G>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2288G>T
  hgvsp: ENSP00000391827.2:p.Gly763Val
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1566G>T
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10980
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35636
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3983
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2321
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5204
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly763Val
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

22-18367078-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367078
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367078
    reference: chr 22
allele count: 2
allele frequency: 1.875257847954094e-5
allele num: 106652
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1566G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1566G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2288G>A
  hgvsp: ENSP00000391827.2:p.Gly763Glu
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1566G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1566G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2288G>A
  hgvsp: ENSP00000207726.7:p.Gly763Glu
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1566G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.844G>A
  hgvsp: ENSP00000462531.1:p.Gly282Glu
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1566G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1566G>A
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35636
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3983
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10980
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2321
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly763Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

22-18367082-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367082
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367082
    reference: chr 22
allele count: 15
allele frequency: 1.409377055341539e-4
allele num: 106430
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2284C>T
  hgvsp: ENSP00000207726.7:p.Pro762Ser
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1562C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1562C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1562C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1562C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2284C>T
  hgvsp: ENSP00000391827.2:p.Pro762Ser
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1562C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.840C>T
  hgvsp: ENSP00000462531.1:p.Pro281Ser
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1562C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1562C>T
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11089
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2334
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2758
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4084
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34656
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3682
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro762Ser
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD

22-18367085-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367085
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367085
    reference: chr 22
allele count: 1
allele frequency: 9.382271260226676e-6
allele num: 106584
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1559C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1559C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2281C>G
  hgvsp: ENSP00000391827.2:p.Leu761Val
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1559C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1559C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1559C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.837C>G
  hgvsp: ENSP00000462531.1:p.Leu280Val
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2281C>G
  hgvsp: ENSP00000207726.7:p.Leu761Val
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1559C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1559C>G
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34584
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4060
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu761Val
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum

22-18367087-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367087
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367087
    reference: chr 22
allele count: 10
allele frequency: 9.396729937981582e-5
allele num: 106420
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2279G>A
  hgvsp: ENSP00000207726.7:p.Cys760Tyr
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1557G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1557G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1557G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1557G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2279G>A
  hgvsp: ENSP00000391827.2:p.Cys760Tyr
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1557G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.835G>A
  hgvsp: ENSP00000462531.1:p.Cys279Tyr
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1557G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1557G>A
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2991
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11217
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 34210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 919
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Cys760Tyr
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: C
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

22-18367091-A-AGGAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367091
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367095
    reference: chr 22
allele count: 1
allele frequency: 9.411233248004819e-6
allele num: 106256
alternate allele: AGGAC
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1549_*1132+1552dupGTCC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1549_2241+1552dupGTCC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.827_830dupGTCC
  hgvsp: ENSP00000462531.1:p.Cys278ValfsTer82
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2271_2274dupGTCC
  hgvsp: ENSP00000207726.7:p.Cys759ValfsTer82
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1549_2241+1552dupGTCC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1549_2241+1552dupGTCC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2271_2274dupGTCC
  hgvsp: ENSP00000391827.2:p.Cys759ValfsTer82
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1549_2241+1552dupGTCC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1549_2241+1552dupGTCC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1549_2241+1552dupGTCC
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33925
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Cys759ValfsTer82
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

22-18367092-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367092
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367092
    reference: chr 22
allele count: 1
allele frequency: 9.416373189702254e-6
allele num: 106198
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1552C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1552C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1552C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1552C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2274C>T
  hgvsp: ENST00000414725.2:c.2274C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.830C>T
  hgvsp: ENST00000461307.1:c.830C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1552C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2274C>T
  hgvsp: ENST00000207726.7:c.2274C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1552C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1552C>T
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33856
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10974
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3359
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1685
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39202
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser758Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

22-18367093-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367093
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367093
    reference: chr 22
allele count: 1
allele frequency: 9.417259954043771e-6
allele num: 106188
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1551C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2273C>A
  hgvsp: ENSP00000207726.7:p.Ser758Tyr
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1551C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1551C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1551C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.829C>A
  hgvsp: ENSP00000462531.1:p.Ser277Tyr
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1551C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2273C>A
  hgvsp: ENSP00000391827.2:p.Ser758Tyr
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1551C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1551C>A
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2199
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4225
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33855
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser758Tyr
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

22-18367095-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367095
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367095
    reference: chr 22
allele count: 159
allele frequency: 1.499688743845617e-3
allele num: 106022
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1549G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1549G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1549G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2271G>A
  hgvsp: ENST00000414725.2:c.2271G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2271G>A
  hgvsp: ENST00000207726.7:c.2271G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.827G>A
  hgvsp: ENST00000461307.1:c.827G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1549G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1549G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1549G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1549G>A
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3574
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 33636
  bin: 2.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 3.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 4247
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 1.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 10732
  bin: 2.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 38784
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6340
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro757Pro
num of homozygotes: 2
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

22-18367096-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367096
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367096
    reference: chr 22
allele count: 13
allele frequency: 1.227712299788456e-4
allele num: 105888
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1548C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2270C>T
  hgvsp: ENSP00000207726.7:p.Pro757Leu
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1548C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1548C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1548C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1548C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.826C>T
  hgvsp: ENSP00000462531.1:p.Pro276Leu
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2270C>T
  hgvsp: ENSP00000391827.2:p.Pro757Leu
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1548C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1548C>T
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10667
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33509
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1011
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro757Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD

22-18367099-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367099
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367099
    reference: chr 22
allele count: 1
allele frequency: 9.44536799153695e-6
allele num: 105872
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1545A>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1545A>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1545A>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2267A>T
  hgvsp: ENSP00000207726.7:p.Gln756Leu
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.823A>T
  hgvsp: ENSP00000462531.1:p.Gln275Leu
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1545A>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1545A>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1545A>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2267A>T
  hgvsp: ENSP00000391827.2:p.Gln756Leu
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1545A>T
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10485
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4358
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3853
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6651
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Gln756Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

22-18367101-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367101
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367101
    reference: chr 22
allele count: 13
allele frequency: 1.231900538245774e-4
allele num: 105528
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1543C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1543C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1543C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1543C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1543C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1543C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2265C>T
  hgvsp: ENST00000414725.2:c.2265C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2265C>T
  hgvsp: ENST00000207726.7:c.2265C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.821C>T
  hgvsp: ENST00000461307.1:c.821C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1543C>T
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4025
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33372
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4440
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10340
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 960
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser755Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD

22-18367103-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367103
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367103
    reference: chr 22
allele count: 1
allele frequency: 9.491448205167145e-6
allele num: 105358
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1541A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.819A>G
  hgvsp: ENSP00000462531.1:p.Ser274Gly
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1541A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1541A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2263A>G
  hgvsp: ENSP00000391827.2:p.Ser755Gly
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2263A>G
  hgvsp: ENSP00000207726.7:p.Ser755Gly
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1541A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1541A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1541A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1541A>G
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4563
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10305
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser755Gly
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

22-18367108-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367108
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367108
    reference: chr 22
allele count: 1
allele frequency: 9.523809523809523e-6
allele num: 105000
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1536G>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.814G>C
  hgvsp: ENSP00000462531.1:p.Gly272Ala
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2258G>C
  hgvsp: ENSP00000207726.7:p.Gly753Ala
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1536G>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2258G>C
  hgvsp: ENSP00000391827.2:p.Gly753Ala
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1536G>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1536G>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1536G>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1536G>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1536G>C
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10296
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32728
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4709
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4609
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7409
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly753Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP

22-18367111-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367111
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367111
    reference: chr 22
allele count: 1
allele frequency: 9.541802637354249e-6
allele num: 104802
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1533G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1533G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1533G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1533G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1533G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2255G>A
  hgvsp: ENSP00000391827.2:p.Arg752His
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2255G>A
  hgvsp: ENSP00000207726.7:p.Arg752His
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1533G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.811G>A
  hgvsp: ENSP00000462531.1:p.Arg271His
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1533G>A
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10242
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4857
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32593
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4789
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1183
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg752His
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff

22-18367112-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367112
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367112
    reference: chr 22
allele count: 2
allele frequency: 1.909672491167765e-5
allele num: 104730
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.810C>T
  hgvsp: ENSP00000462531.1:p.Arg271Cys
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2254C>T
  hgvsp: ENSP00000391827.2:p.Arg752Cys
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2254C>T
  hgvsp: ENSP00000207726.7:p.Arg752Cys
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1532C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1532C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1532C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1532C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1532C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1532C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1532C>T
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10238
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4841
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4955
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg752Cys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

22-18367117-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367117
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367118
    reference: chr 22
allele count: 3
allele frequency: 2.88217661978326e-5
allele num: 104088
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1526_*1132+1527insT
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1526_2241+1527insT
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2248_2249insT
  hgvsp: ENSP00000391827.2:p.Gln750LeufsTer90
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.804_805insT
  hgvsp: ENSP00000462531.1:p.Gln269LeufsTer90
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1526_2241+1527insT
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2248_2249insT
  hgvsp: ENSP00000207726.7:p.Gln750LeufsTer90
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1526_2241+1527insT
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1526_2241+1527insT
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1526_2241+1527insT
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1526_2241+1527insT
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: frameshift
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5977
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10244
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1357
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln750LeufsTer90
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

22-18367118-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367118
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367118
    reference: chr 22
allele count: 3
allele frequency: 2.885114731395818e-5
allele num: 103982
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1526C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2248C>G
  hgvsp: ENSP00000391827.2:p.Gln750Glu
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1526C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1526C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2248C>G
  hgvsp: ENSP00000207726.7:p.Gln750Glu
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1526C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1526C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.804C>G
  hgvsp: ENSP00000462531.1:p.Gln269Glu
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1526C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1526C>G
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31070
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gln750Glu
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

22-18367121-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367121
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367121
    reference: chr 22
allele count: 1
allele frequency: 9.643201542912246e-6
allele num: 103700
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2245A>G
  hgvsp: ENSP00000391827.2:p.Thr749Ala
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1523A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1523A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1523A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1523A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.801A>G
  hgvsp: ENSP00000462531.1:p.Thr268Ala
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1523A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1523A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2245A>G
  hgvsp: ENSP00000207726.7:p.Thr749Ala
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1523A>G
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30566
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6565
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr749Ala
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/22-18367123-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367123
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367123
    reference: chr 22
allele count: 3
allele frequency: 2.899671370578001e-5
allele num: 103460
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1521T>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2243T>G
  hgvsp: ENSP00000391827.2:p.Leu748Arg
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1521T>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.799T>G
  hgvsp: ENSP00000462531.1:p.Leu267Arg
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1521T>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1521T>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2243T>G
  hgvsp: ENSP00000207726.7:p.Leu748Arg
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1521T>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1521T>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1521T>G
  variant of: http://identifiers.org/hgnc/24694
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6947
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30121
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5478
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10137
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1295
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu748Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

22-18367133-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367133
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367133
    reference: chr 22
allele count: 1
allele frequency: 9.850081755678572e-6
allele num: 101522
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1511G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1511G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1511G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2242-9G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1511G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1511G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1511G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1511G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.798-9G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2242-9G>A
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6307
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26058
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9560
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 937
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

22-18367136-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367136
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367136
    reference: chr 22
allele count: 1
allele frequency: 9.945103031267404e-6
allele num: 100552
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.798-12T>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2242-12T>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1508T>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1508T>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2242-12T>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1508T>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1508T>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1508T>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1508T>C
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1508T>C
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6664
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23710
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14416
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

22-18367138-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367138
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367138
    reference: chr 22
allele count: 1
allele frequency: 9.99980000399992e-6
allele num: 100002
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1506C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1506C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2242-14C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1506C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1506C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1506C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1506C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1506C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2242-14C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.798-14C>T
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6905
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8728
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2599
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2796
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

22-18367146-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367146
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367145
    reference: chr 22
allele count: 2
allele frequency: 2.028191866950614e-5
allele num: 98610
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2242-23delC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1497delC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1497delC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1497delC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2242-23delC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1497delC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1497delC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.798-23delC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1497delC
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1497delC
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17165
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3761
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22215
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: TG
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD

22-18367149-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367149
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367149
    reference: chr 22
allele count: 1
allele frequency: 1.022453069404114e-5
allele num: 97804
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1495C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1495C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1495C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2242-25C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2242-25C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1495C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1495C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.798-25C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1495C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1495C>A
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15810
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6802
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4627
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7594
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2083
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1362
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

22-18367150-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367150
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367150
    reference: chr 22
allele count: 1
allele frequency: 1.023751023751024e-5
allele num: 97680
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1494A>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1494A>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.798-26A>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1494A>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1494A>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2242-26A>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1494A>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1494A>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1494A>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2242-26A>T
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7619
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15759
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6832
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4576
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4468
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

22-18367154-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367154
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367154
    reference: chr 22
allele count: 2
allele frequency: 2.074817934726228e-5
allele num: 96394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2242-30C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1490C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1490C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1490C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1490C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1490C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1490C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1490C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2242-30C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.798-30C>T
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5733
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7877
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6652
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21774
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11747
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6083
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2953
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP

22-18367163-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18367163
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18367163
    reference: chr 22
allele count: 2
allele frequency: 2.193848448949147e-5
allele num: 91164
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+1481A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+1481A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+1481A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+1481A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+1481A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+1481A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+1481A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2242-39A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.798-39A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2242-39A>G
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6530
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11846
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21723
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9901
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

22-18368597-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18368597
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18368597
    reference: chr 22
allele count: 1
allele frequency: 8.428860418071477e-6
allele num: 118640
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+47C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+47C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2241+47C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+47C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+47C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+47C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2241+47C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.797+47C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+47C>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+47C>G
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3198
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3286
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4438
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6093
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2674
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2578
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4826
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3772
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46599
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1201
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff

22-18368599-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18368599
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18368599
    reference: chr 22
allele count: 1
allele frequency: 8.424883736604435e-6
allele num: 118696
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+45C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.797+45C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+45C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2241+45C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+45C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+45C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+45C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+45C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2241+45C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+45C>A
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3198
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4437
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6094
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3286
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3772
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4826
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2674
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

22-18368614-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18368614
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18368614
    reference: chr 22
allele count: 494
allele frequency: 4.155101354192951e-3
allele num: 118890
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+30G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+30G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.797+30G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2241+30G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+30G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2241+30G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+30G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+30G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+30G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+30G>A
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3463
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 5484
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 4417
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 7.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 9.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 6068
  bin: 5.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 8.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 8.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 4817
  bin: 6.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4146
  bin: 6.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 5.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 3885
  bin: 9.75e1
  variant carriers: 158
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 7.25e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 11
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

22-18368615-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18368615
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18368615
    reference: chr 22
allele count: 393
allele frequency: 3.30390920554855e-3
allele num: 118950
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+29C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+29C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2241+29C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+29C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2241+29C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+29C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.797+29C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+29C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+29C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+29C>T
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 7.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 4822
  bin: 6.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 4398
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6053
  bin: 5.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 7.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 5669
  bin: 5.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 3903
  bin: 9.75e1
  variant carriers: 142
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 8.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5480
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3647
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 4124
  bin: 6.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 2751
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 9.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 8.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 11
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

22-18368616-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18368616
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18368616
    reference: chr 22
allele count: 1
allele frequency: 8.403926314374075e-6
allele num: 118992
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.797+28C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+28C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+28C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2241+28C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+28C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+28C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+28C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+28C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+28C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2241+28C>A
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6058
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5673
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 903
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

22-18368631-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18368631
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18368631
    reference: chr 22
allele count: 2
allele frequency: 1.675462846611376e-5
allele num: 119370
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2241+13C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+13C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+13C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.797+13C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+13C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+13C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+13C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+13C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+13C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2241+13C>T
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5673
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6059
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5489
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

22-18368632-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18368632
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18368632
    reference: chr 22
allele count: 2
allele frequency: 1.675069934169752e-5
allele num: 119398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.797+12C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132+12C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241+12C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2241+12C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241+12C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2241+12C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241+12C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241+12C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241+12C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241+12C>T
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2257
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4079
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4413
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6058
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5672
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

22-18368644-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18368644
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18368644
    reference: chr 22
allele count: 1
allele frequency: 8.365540664893172e-6
allele num: 119538
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.797G>A
  hgvsp: ENST00000461307.1:c.797G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2241G>A
  hgvsp: ENST00000383094.3:c.2241G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2241G>A
  hgvsp: ENST00000400561.2:c.2241G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2241G>A
  hgvsp: ENST00000414725.2:c.2241G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2241G>A
  hgvsp: ENST00000429452.1:c.2241G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2241G>A
  hgvsp: ENST00000444520.1:c.2241G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2241G>A
  hgvsp: ENST00000441493.2:c.2241G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1132G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2241G>A
  hgvsp: ENST00000207726.7:c.2241G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2241G>A
  hgvsp: ENST00000585038.1:c.2241G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4104
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2257
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6058
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5673
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.2241G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

22-18368651-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18368651
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18368651
    reference: chr 22
allele count: 10
allele frequency: 8.364840900726069e-5
allele num: 119548
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2234G>A
  hgvsp: ENSP00000372574.3:p.Arg745Gln
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2234G>A
  hgvsp: ENSP00000416015.2:p.Arg745Gln
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.790G>A
  hgvsp: ENSP00000462531.1:p.Arg264Gln
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2234G>A
  hgvsp: ENSP00000410315.1:p.Arg745Gln
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2234G>A
  hgvsp: ENSP00000391827.2:p.Arg745Gln
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2234G>A
  hgvsp: ENSP00000207726.7:p.Arg745Gln
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1125G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2234G>A
  hgvsp: ENSP00000414846.1:p.Arg745Gln
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2234G>A
  hgvsp: ENSP00000383406.2:p.Arg745Gln
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2234G>A
  hgvsp: ENSP00000462033.1:p.Arg745Gln
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4096
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5489
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3817
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5673
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2856
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4131
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6058
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4415
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2257
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg745Gln
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

22-18368659-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18368659
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18368659
    reference: chr 22
allele count: 1
allele frequency: 8.360644772924887e-6
allele num: 119608
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2226C>T
  hgvsp: ENST00000444520.1:c.2226C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2226C>T
  hgvsp: ENST00000207726.7:c.2226C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2226C>T
  hgvsp: ENST00000383094.3:c.2226C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2226C>T
  hgvsp: ENST00000400561.2:c.2226C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2226C>T
  hgvsp: ENST00000414725.2:c.2226C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2226C>T
  hgvsp: ENST00000585038.1:c.2226C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.782C>T
  hgvsp: ENST00000461307.1:c.782C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2226C>T
  hgvsp: ENST00000429452.1:c.2226C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1117C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2226C>T
  hgvsp: ENST00000441493.2:c.2226C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6058
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2866
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5673
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile742Ile
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

22-18368662-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18368662
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18368662
    reference: chr 22
allele count: 1
allele frequency: 8.359386755387625e-6
allele num: 119626
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2223C>T
  hgvsp: ENST00000441493.2:c.2223C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2223C>T
  hgvsp: ENST00000429452.1:c.2223C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2223C>T
  hgvsp: ENST00000585038.1:c.2223C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2223C>T
  hgvsp: ENST00000207726.7:c.2223C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2223C>T
  hgvsp: ENST00000444520.1:c.2223C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2223C>T
  hgvsp: ENST00000383094.3:c.2223C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1114C>T
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.779C>T
  hgvsp: ENST00000461307.1:c.779C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2223C>T
  hgvsp: ENST00000400561.2:c.2223C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2223C>T
  hgvsp: ENST00000414725.2:c.2223C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5675
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6058
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4828
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3479
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2865
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3812
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser741Ser
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

22-18368666-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18368666
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18368666
    reference: chr 22
allele count: 28
allele frequency: 2.340237032579443e-4
allele num: 119646
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.775A>G
  hgvsp: ENSP00000462531.1:p.Gln259Arg
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2219A>G
  hgvsp: ENSP00000410315.1:p.Gln740Arg
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2219A>G
  hgvsp: ENSP00000207726.7:p.Gln740Arg
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2219A>G
  hgvsp: ENSP00000391827.2:p.Gln740Arg
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1110A>G
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2219A>G
  hgvsp: ENSP00000372574.3:p.Gln740Arg
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2219A>G
  hgvsp: ENSP00000383406.2:p.Gln740Arg
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2219A>G
  hgvsp: ENSP00000414846.1:p.Gln740Arg
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2219A>G
  hgvsp: ENSP00000416015.2:p.Gln740Arg
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2219A>G
  hgvsp: ENSP00000462033.1:p.Gln740Arg
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3482
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4121
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6056
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4408
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4826
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3836
  bin: 9.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 5671
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gln740Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

22-18368670-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18368670
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18368670
    reference: chr 22
allele count: 7
allele frequency: 5.850494784701792e-5
allele num: 119648
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2215G>A
  hgvsp: ENSP00000372574.3:p.Ala739Thr
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2215G>A
  hgvsp: ENSP00000410315.1:p.Ala739Thr
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1106G>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2215G>A
  hgvsp: ENSP00000207726.7:p.Ala739Thr
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2215G>A
  hgvsp: ENSP00000391827.2:p.Ala739Thr
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2215G>A
  hgvsp: ENSP00000416015.2:p.Ala739Thr
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2215G>A
  hgvsp: ENSP00000462033.1:p.Ala739Thr
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.771G>A
  hgvsp: ENSP00000462531.1:p.Ala258Thr
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2215G>A
  hgvsp: ENSP00000383406.2:p.Ala739Thr
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2215G>A
  hgvsp: ENSP00000414846.1:p.Ala739Thr
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4116
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4413
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5672
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3820
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6058
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4828
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala739Thr
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

22-18368671-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18368671
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18368671
    reference: chr 22
allele count: 7
allele frequency: 5.84912597346168e-5
allele num: 119676
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2214C>T
  hgvsp: ENST00000400561.2:c.2214C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2214C>T
  hgvsp: ENST00000207726.7:c.2214C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2214C>T
  hgvsp: ENST00000441493.2:c.2214C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2214C>T
  hgvsp: ENST00000444520.1:c.2214C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2214C>T
  hgvsp: ENST00000414725.2:c.2214C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2214C>T
  hgvsp: ENST00000585038.1:c.2214C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2214C>T
  hgvsp: ENST00000383094.3:c.2214C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2214C>T
  hgvsp: ENST00000429452.1:c.2214C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.770C>T
  hgvsp: ENST00000461307.1:c.770C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1105C>T
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4413
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4827
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5672
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4130
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4121
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6053
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro738Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

22-18368671-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18368671
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 18368671
    reference: chr 22
allele count: 8
allele frequency: 6.68471539824192e-5
allele num: 119676
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000391827
  ensembl transcript: ENST00000414725
  gene symbol: MICAL3
  hgvsc: ENST00000414725.2:c.2214C>A
  hgvsp: ENST00000414725.2:c.2214C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000372574
  ensembl transcript: ENST00000383094
  gene symbol: MICAL3
  hgvsc: ENST00000383094.3:c.2214C>A
  hgvsp: ENST00000383094.3:c.2214C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000207726
  ensembl transcript: ENST00000207726
  gene symbol: MICAL3
  hgvsc: ENST00000207726.7:c.2214C>A
  hgvsp: ENST00000207726.7:c.2214C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000383406
  ensembl transcript: ENST00000400561
  gene symbol: MICAL3
  hgvsc: ENST00000400561.2:c.2214C>A
  hgvsp: ENST00000400561.2:c.2214C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000410315
  ensembl transcript: ENST00000444520
  gene symbol: MICAL3
  hgvsc: ENST00000444520.1:c.2214C>A
  hgvsp: ENST00000444520.1:c.2214C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000416015
  ensembl transcript: ENST00000441493
  gene symbol: MICAL3
  hgvsc: ENST00000441493.2:c.2214C>A
  hgvsp: ENST00000441493.2:c.2214C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462531
  ensembl transcript: ENST00000461307
  gene symbol: MICAL3
  hgvsc: ENST00000461307.1:c.770C>A
  hgvsp: ENST00000461307.1:c.770C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000434678
  ensembl transcript: ENST00000495076
  gene symbol: MICAL3
  hgvsc: ENST00000495076.1:c.*1105C>A
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000414846
  ensembl transcript: ENST00000429452
  gene symbol: MICAL3
  hgvsc: ENST00000429452.1:c.2214C>A
  hgvsp: ENST00000429452.1:c.2214C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000243156
  ensembl protein: ENSP00000462033
  ensembl transcript: ENST00000585038
  gene symbol: MICAL3
  hgvsc: ENST00000585038.1:c.2214C>A
  hgvsp: ENST00000585038.1:c.2214C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24694
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4413
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5672
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6053
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4827
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4121
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 9.75e1
  variant carriers: 8
hgvs: p.Pro738Pro
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 7216
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1956
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3083
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33481
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3158
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3306
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1967
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9742
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511304558094547e-5
allele num: 66168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16190
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.452e0

FS
type: SiteQuality
SIO_000300: 7.649e0

QD
type: SiteQuality
SIO_000300: 1.394e1

MQ
type: SiteQuality
SIO_000300: 5.964e1

VQSLOD
type: SiteQuality
SIO_000300: 9.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.137e0

DP
type: SiteQuality
SIO_000300: 2.714185e6

GenotypeQuality
all individuals: 775
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3062
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1954
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6756
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1968
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3080
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3158
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33480
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3267
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66154
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.026483268322726e-4
allele num: 9742
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16158
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.591e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.45e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

QD
type: SiteQuality
SIO_000300: 1.314e1

MQRankSum
type: SiteQuality
SIO_000300: -7.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

DP
type: SiteQuality
SIO_000300: 2.70892e6

GenotypeQuality
all individuals: 4856
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3072
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1907
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1961
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3045
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3038
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3155
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16006
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729505361466621e-4
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66102
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.207e1

MQRankSum
type: SiteQuality
SIO_000300: 9.409999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.695378e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.288e0

VQSLOD
type: SiteQuality
SIO_000300: 6.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 2187
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 2694
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1112
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4369
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8391
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 99
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12263
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1654
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2961
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2097
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5187
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4042
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8014
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.227270702481179e-5
allele num: 44898
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 564
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.92148e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.96e-1

QD
type: SiteQuality
SIO_000300: 1.53e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

GenotypeQuality
all individuals: 4010
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1563
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7059
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5182
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12558
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2437
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8365
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6546
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2916
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2172
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1669
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4062
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6400
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 7.158196134574087e-4
allele num: 5588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44972
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8030
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.116e0

QD
type: SiteQuality
SIO_000300: 1.198e1

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

VQSLOD
type: SiteQuality
SIO_000300: 7.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.98697e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1947
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4992
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1388
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1843
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5785
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13310
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7708
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1800
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45766
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8142
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4174
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.567511994516793e-5
allele num: 11672
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

MQRankSum
type: SiteQuality
SIO_000300: -5.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.74e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.174e1

FS
type: SiteQuality
SIO_000300: 3.132e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.61e-1

DP
type: SiteQuality
SIO_000300: 8.54479e5

GenotypeQuality
all individuals: 558
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3760
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6664
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46756
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4282
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.45880561664693e-5
allele num: 11822
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

VQSLOD
type: SiteQuality
SIO_000300: -1.659e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

QD
type: SiteQuality
SIO_000300: 5.39e0

FS
type: SiteQuality
SIO_000300: 6.201e0

DP
type: SiteQuality
SIO_000300: 9.25755e5

GenotypeQuality
all individuals: 253
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6926
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12182
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8788
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.047669751822426e-5
allele num: 48836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6036
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.511e0

VQSLOD
type: SiteQuality
SIO_000300: 5.7e-2

QD
type: SiteQuality
SIO_000300: 1.137e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

MQRankSum
type: SiteQuality
SIO_000300: 1.43e0

DP
type: SiteQuality
SIO_000300: 1.006281e6

GenotypeQuality
all individuals: 587
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32832
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 471
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GenotypeQuality
all individuals: 120
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 133
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variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4934
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6394
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.856693903205531e-5
allele num: 12728
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9362
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.567398119122257e-3
allele num: 638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51870
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

QD
type: SiteQuality
SIO_000300: 9.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.03e-1

DP
type: SiteQuality
SIO_000300: 1.100146e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

FS
type: SiteQuality
SIO_000300: 7.15e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 387
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
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variant carriers: 0

GenotypeQuality
all individuals: 38698
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 244
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variant carriers: 0

GenotypeQuality
all individuals: 1148
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variant carriers: 0

GenotypeQuality
all individuals: 389
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GenotypeQuality
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GenotypeQuality
all individuals: 74
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GenotypeQuality
all individuals: 663
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variant carriers: 6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 167
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GenotypeQuality
all individuals: 543
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7842
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10046
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 702
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.084363478638039e-4
allele num: 55332
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.29e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.181e1

VQSLOD
type: SiteQuality
SIO_000300: 7.71e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.180896e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.8e-2

GenotypeQuality
all individuals: 392
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1099
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variant carriers: 0

GenotypeQuality
all individuals: 7721
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 754
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 13

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 168
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GenotypeQuality
all individuals: 459
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 708
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7884
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.916699722332408e-5
allele num: 10084
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.977279263733103e-4
allele num: 55632
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.355104442483083e-5
allele num: 13596
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.36e-1

QD
type: SiteQuality
SIO_000300: 9.130000000000001e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.85e-1

DP
type: SiteQuality
SIO_000300: 1.190642e6

GenotypeQuality
all individuals: 760
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.355104442483083e-5
allele num: 13596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10084
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 708
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55632
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -9.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.36e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.190642e6

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 153
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GenotypeQuality
all individuals: 865
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13852
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 4.254112308564946e-4
allele num: 7052
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8002
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.528955076401878e-5
allele num: 56674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.230308e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

FS
type: SiteQuality
SIO_000300: 5.93e-1

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 6.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.29e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

VQSLOD
type: SiteQuality
SIO_000300: 2.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 1007
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38880
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GenotypeQuality
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GenotypeQuality
all individuals: 975
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 865
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.528955076401878e-5
allele num: 56674
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.249687578105474e-4
allele num: 8002
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.08e0

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.3e0

FS
type: SiteQuality
SIO_000300: 5.93e-1

DP
type: SiteQuality
SIO_000300: 1.230308e6

MQ
type: SiteQuality
SIO_000300: 5.984e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.29e-1

GenotypeQuality
all individuals: 3344
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 7.5e0
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 826
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5658
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.514444366345681e-5
allele num: 56908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7084
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8034
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.1571714858288e-5
allele num: 13972
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.859e1

MQRankSum
type: SiteQuality
SIO_000300: -1.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e-1

QD
type: SiteQuality
SIO_000300: 9.630000000000001e0

FS
type: SiteQuality
SIO_000300: 1.546e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.09e0

DP
type: SiteQuality
SIO_000300: 1.238035e6

GenotypeQuality
all individuals: 473
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6023
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
all individuals: 182
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.578544061302682e-5
allele num: 10440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14164
num of homozygotes: 0

African
type: Population
allele count: 15
allele frequency: 2.072395689416966e-3
allele num: 7238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.111385527290689e-3
allele num: 8098
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57594
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.63e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.19e-1

FS
type: SiteQuality
SIO_000300: 3.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.01e-1

DP
type: SiteQuality
SIO_000300: 1.241541e6

QD
type: SiteQuality
SIO_000300: 1.189e1

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

GenotypeQuality
all individuals: 193
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7238
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 61
allele frequency: 1.05913810466368e-3
allele num: 57594
num of homozygotes: 2

East Asian
type: Population
allele count: 1
allele frequency: 1.234872808100766e-4
allele num: 8098
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.344086021505376e-3
allele num: 744
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 5.242922055225446e-4
allele num: 5722
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.412030499858797e-4
allele num: 14164
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

MQRankSum
type: SiteQuality
SIO_000300: 3.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.63e-2

FS
type: SiteQuality
SIO_000300: 3.3e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.241541e6

QD
type: SiteQuality
SIO_000300: 1.189e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.01e-1

GenotypeQuality
all individuals: 241
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 2.5e0
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GenotypeQuality
all individuals: 178
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variant carriers: 0

GenotypeQuality
all individuals: 919
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variant carriers: 0

GenotypeQuality
all individuals: 414
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GenotypeQuality
all individuals: 487
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variant carriers: 0

GenotypeQuality
all individuals: 680
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GenotypeQuality
all individuals: 240
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GenotypeQuality
all individuals: 465
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GenotypeQuality
all individuals: 61
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variant carriers: 0

GenotypeQuality
all individuals: 63
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variant carriers: 0

GenotypeQuality
all individuals: 3593
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variant carriers: 0

GenotypeQuality
all individuals: 551
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variant carriers: 0

GenotypeQuality
all individuals: 5938
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GenotypeQuality
all individuals: 193
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variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8102
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14206
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7254
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.732982115624567e-5
allele num: 57704
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.37e-1

DP
type: SiteQuality
SIO_000300: 1.242818e6

FS
type: SiteQuality
SIO_000300: 1.591e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.860000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.001e1

GenotypeQuality
all individuals: 101
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
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GenotypeQuality
all individuals: 437
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GenotypeQuality
all individuals: 552
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GenotypeQuality
all individuals: 604
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 685
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variant carriers: 1

GenotypeQuality
all individuals: 776
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3612
bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 261
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GenotypeQuality
all individuals: 549
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GenotypeQuality
all individuals: 100
bin: 1.75e1
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GenotypeQuality
all individuals: 921
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8100
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.73238167833137e-5
allele num: 57724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7260
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.087e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.752000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.4e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.651e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.340000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.43e-1

DP
type: SiteQuality
SIO_000300: 1.243669e6

GenotypeQuality
all individuals: 3612
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5870
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 85
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 100
bin: 1.75e1
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GenotypeQuality
all individuals: 921
bin: 7.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 9.25e1
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GenotypeQuality
all individuals: 549
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 9.75e1
variant carriers: 4

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5722
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57724
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7260
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8100
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10460
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.815711671124877e-4
allele num: 14206
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.340000000000001e-1

FS
type: SiteQuality
SIO_000300: 9.752000000000001e0

DP
type: SiteQuality
SIO_000300: 1.243669e6

VQSLOD
type: SiteQuality
SIO_000300: -4.651e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

QD
type: SiteQuality
SIO_000300: 1.087e1

GenotypeQuality
all individuals: 305
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 8.75e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 689
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GenotypeQuality
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GenotypeQuality
all individuals: 83
bin: 1.75e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 692
bin: 9.75e1
variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 909
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GenotypeQuality
all individuals: 5612
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 6
allele frequency: 8.190008190008191e-4
allele num: 7326
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5800
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8126
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58022
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.6e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.548e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQ
type: SiteQuality
SIO_000300: 5.962e1

QD
type: SiteQuality
SIO_000300: 1.487e1

MQRankSum
type: SiteQuality
SIO_000300: 8.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.761e0

FS
type: SiteQuality
SIO_000300: 2.7047e1

DP
type: SiteQuality
SIO_000300: 1.252524e6

GenotypeQuality
all individuals: 975
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 2.5e0
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GenotypeQuality
all individuals: 3697
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 557
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GenotypeQuality
all individuals: 680
bin: 5.25e1
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GenotypeQuality
all individuals: 446
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 909
bin: 7.75e1
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GenotypeQuality
all individuals: 40877
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5526
bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 762
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5816
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 58184
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 7344
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 9.489466691971911e-5
allele num: 10538
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.255356e6

QD
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.684e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.398e0

MQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8186
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 58544
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10572
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South Asian
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allele frequency: 6.905123601712471e-5
allele num: 14482
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.61e-1

ReadPosRankSum
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SIO_000300: 8.49e-1

MQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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FS
type: SiteQuality
SIO_000300: 3.523e0

DP
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SIO_000300: 1.268635e6

BaseQRankSum
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SIO_000300: -2.79e0

QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 5922
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 2
allele frequency: 2.686727565824826e-4
allele num: 7444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10600
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 58666
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 4.2e-3

MQ
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SIO_000300: 6.0e1

DP
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SIO_000300: 1.272618e6

ClippingRankSum
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SIO_000300: -9.6e-2

BaseQRankSum
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ReadPosRankSum
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SIO_000300: 5.8e-1

MQRankSum
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FS
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SIO_000300: 4.38e0

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 9.87e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10600
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8196
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5922
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.879471656576775e-4
allele num: 14536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58666
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.38e0

QD
type: SiteQuality
SIO_000300: 1.36e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.6e-2

DP
type: SiteQuality
SIO_000300: 1.272618e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5972
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.69785052124011e-5
allele num: 58898
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.529e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.15e-1

QD
type: SiteQuality
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ReadPosRankSum
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DP
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InbreedingCoeff
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SIO_000300: -1.0e-3

BaseQRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 7.24e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
allele num: 7474
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele num: 14652
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Other
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num of homozygotes: 0

QD
type: SiteQuality
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DP
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MQ
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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FS
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VQSLOD
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 58932
num of homozygotes: 0

South Asian
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Latino
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 788
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 2.44081034903588e-4
allele num: 8194
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African
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BaseQRankSum
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MQRankSum
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QD
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ReadPosRankSum
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DP
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FS
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 2.01775625504439e-3
allele num: 7434
num of homozygotes: 0

South Asian
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East Asian
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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Other
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ReadPosRankSum
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MQRankSum
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MQ
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VQSLOD
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BaseQRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 911
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3708
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.696986152592995e-5
allele num: 58928
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8194
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5976
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14626
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

FS
type: SiteQuality
SIO_000300: 2.74e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

DP
type: SiteQuality
SIO_000300: 1.273091e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.3e-2

QD
type: SiteQuality
SIO_000300: 7.96e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.61e-1

GenotypeQuality
all individuals: 3634
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.5e0
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 719
bin: 9.75e1
variant carriers: 10

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5962
num of homozygotes: 0

East Asian
type: Population
allele count: 10
allele frequency: 1.222493887530562e-3
allele num: 8180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58856
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7436
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.147e1

FS
type: SiteQuality
SIO_000300: 6.944e0

MQRankSum
type: SiteQuality
SIO_000300: 3.21e-1

DP
type: SiteQuality
SIO_000300: 1.270112e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.869e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 6150
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 978
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variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58756
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5948
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7426
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.847439057792385e-5
allele num: 14604
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.85e1

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.16e-1

QD
type: SiteQuality
SIO_000300: 1.48e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.02e-1

FS
type: SiteQuality
SIO_000300: 7.319e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.561e0

MQRankSum
type: SiteQuality
SIO_000300: 9.71e-1

DP
type: SiteQuality
SIO_000300: 1.26427e6

GenotypeQuality
all individuals: 62
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 596
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 890
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 841
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5952
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.703229322796021e-5
allele num: 58712
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8172
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.262229e6

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.706e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.686e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.27e-1

FS
type: SiteQuality
SIO_000300: 4.376e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

GenotypeQuality
all individuals: 856
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
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GenotypeQuality
all individuals: 585
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GenotypeQuality
all individuals: 908
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variant carriers: 0

GenotypeQuality
all individuals: 598
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GenotypeQuality
all individuals: 6251
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GenotypeQuality
all individuals: 58
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GenotypeQuality
all individuals: 39240
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variant carriers: 0

GenotypeQuality
all individuals: 3618
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 717
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GenotypeQuality
all individuals: 107
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variant carriers: 0

GenotypeQuality
all individuals: 414
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GenotypeQuality
all individuals: 843
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variant carriers: 0

GenotypeQuality
all individuals: 195
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GenotypeQuality
all individuals: 970
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5944
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58716
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.223391240518718e-4
allele num: 8174
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.238e0

FS
type: SiteQuality
SIO_000300: 1.907e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

MQRankSum
type: SiteQuality
SIO_000300: -1.384e0

QD
type: SiteQuality
SIO_000300: 1.143e1

DP
type: SiteQuality
SIO_000300: 1.261015e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.951e0

VQSLOD
type: SiteQuality
SIO_000300: 9.299999999999999e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

MQ
type: SiteQuality
SIO_000300: 5.952e1

GenotypeQuality
all individuals: 184
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 622
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 71
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variant carriers: 0

GenotypeQuality
all individuals: 956
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variant carriers: 0

GenotypeQuality
all individuals: 873
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GenotypeQuality
all individuals: 3579
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GenotypeQuality
all individuals: 477
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variant carriers: 0

GenotypeQuality
all individuals: 128
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variant carriers: 0

GenotypeQuality
all individuals: 374
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GenotypeQuality
all individuals: 613
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GenotypeQuality
all individuals: 655
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GenotypeQuality
all individuals: 459
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GenotypeQuality
all individuals: 81
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GenotypeQuality
all individuals: 863
bin: 9.75e1
variant carriers: 153

GenotypeQuality
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GenotypeQuality
all individuals: 885
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GenotypeQuality
all individuals: 959
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 145
allele frequency: 1.956815114709852e-2
allele num: 7410
num of homozygotes: 2

Latino
type: Population
allele count: 9
allele frequency: 8.561643835616438e-4
allele num: 10512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5942
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.369112814895947e-4
allele num: 14608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.412969283276451e-5
allele num: 58600
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.265822784810127e-3
allele num: 790
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8160
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.259715e6

FS
type: SiteQuality
SIO_000300: 5.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

QD
type: SiteQuality
SIO_000300: 1.171e1

GenotypeQuality
all individuals: 949
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
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GenotypeQuality
all individuals: 729
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variant carriers: 13

GenotypeQuality
all individuals: 3570
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 85
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 668
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GenotypeQuality
all individuals: 644
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GenotypeQuality
all individuals: 913
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GenotypeQuality
all individuals: 658
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variant carriers: 0

GenotypeQuality
all individuals: 478
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variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.586849852796859e-4
allele num: 8152
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14618
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.35685210312076e-4
allele num: 7370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 5.057316250842886e-4
allele num: 5932
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.518370454978108e-5
allele num: 10506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.708817498291182e-5
allele num: 58520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.56e-1

DP
type: SiteQuality
SIO_000300: 1.25478e6

MQ
type: SiteQuality
SIO_000300: 5.951e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

FS
type: SiteQuality
SIO_000300: 5.905e0

QD
type: SiteQuality
SIO_000300: 1.395e1

GenotypeQuality
all individuals: 39099
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variant carriers: 0

GenotypeQuality
all individuals: 109
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GenotypeQuality
all individuals: 568
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GenotypeQuality
all individuals: 607
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 907
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 962
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GenotypeQuality
all individuals: 482
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GenotypeQuality
all individuals: 71
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5926
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7370
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8152
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.839945280437756e-5
allele num: 14620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.38e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.071e0

VQSLOD
type: SiteQuality
SIO_000300: -2.831e-1

DP
type: SiteQuality
SIO_000300: 1.250891e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.625e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

QD
type: SiteQuality
SIO_000300: 1.595e1

GenotypeQuality
all individuals: 104
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6768
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 93
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GenotypeQuality
all individuals: 1050
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GenotypeQuality
all individuals: 741
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GenotypeQuality
all individuals: 477
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GenotypeQuality
all individuals: 607
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GenotypeQuality
all individuals: 38530
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 12

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5898
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 58306
num of homozygotes: 0

East Asian
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allele count: 4
allele frequency: 4.927322000492732e-4
allele num: 8118
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7350
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 8.602561651691837e-4
allele num: 10462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
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SIO_000300: 1.08e0

BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.36e-1

ReadPosRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 9.6e-2

MQ
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SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 3.258e0

DP
type: SiteQuality
SIO_000300: 1.246499e6

QD
type: SiteQuality
SIO_000300: 1.126e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10442
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8112
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.717799841962415e-5
allele num: 58214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5872
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.815e0

FS
type: SiteQuality
SIO_000300: 1.585e0

DP
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.18e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.54e-1

QD
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VQSLOD
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SIO_000300: -2.501e0

MQ
type: SiteQuality
SIO_000300: 5.92e1

BaseQRankSum
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SIO_000300: -1.155e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Latino
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allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5858
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 57962
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8090
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7324
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14580
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
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MQ
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SIO_000300: 6.0e1

VQSLOD
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FS
type: SiteQuality
SIO_000300: 2.517e0

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

DP
type: SiteQuality
SIO_000300: 1.235123e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5830
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.646922631680494e-5
allele num: 10366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8074
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7290
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.752e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

DP
type: SiteQuality
SIO_000300: 1.231423e6

QD
type: SiteQuality
SIO_000300: 6.72e0

MQRankSum
type: SiteQuality
SIO_000300: -8.8e-1

FS
type: SiteQuality
SIO_000300: 9.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.85e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.458173392813916e-5
allele num: 57834
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 1.229856e6

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -2.51e-1

VQSLOD
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ReadPosRankSum
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MQ
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 1.188e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5808
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 3
allele frequency: 5.220296512841929e-5
allele num: 57468
num of homozygotes: 0

VQSLOD
type: SiteQuality
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ReadPosRankSum
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MQRankSum
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FS
type: SiteQuality
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QD
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MQ
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InbreedingCoeff
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BaseQRankSum
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele count: 2
allele frequency: 2.768549280177187e-4
allele num: 7224
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
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allele num: 57428
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MQRankSum
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VQSLOD
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ClippingRankSum
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MQ
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BaseQRankSum
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QD
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FS
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 780
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5780
num of homozygotes: 0

African
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South Asian
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East Asian
type: Population
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allele frequency: 1.251564455569462e-4
allele num: 7990
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 57284
num of homozygotes: 0

MQRankSum
type: SiteQuality
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InbreedingCoeff
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FS
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QD
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BaseQRankSum
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ClippingRankSum
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DP
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MQ
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 10146
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 57148
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 3
allele frequency: 2.0755500207555e-4
allele num: 14454
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5770
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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VQSLOD
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FS
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ClippingRankSum
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MQ
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DP
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 1.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
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SIO_000300: 9.85e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 7044
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.784503372711375e-5
allele num: 56038
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 760
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

MQ
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SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -2.789e0

DP
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QD
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FS
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.27e-1

VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 55468
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14152
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5622
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 1.021867974657674e-4
allele num: 9786
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.899999999999999e-1

DP
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VQSLOD
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BaseQRankSum
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FS
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InbreedingCoeff
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SIO_000300: -2.1e-3

MQRankSum
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ReadPosRankSum
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QD
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MQ
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SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7748
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9698
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6970
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 7.08918190840777e-5
allele num: 14106
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 55136
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5602
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.37e-1

InbreedingCoeff
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VQSLOD
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DP
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FS
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: -5.37e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13980
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.684326873480215e-5
allele num: 54284
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
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SIO_000300: 3.7e-1

InbreedingCoeff
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FS
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SIO_000300: 0.0e0

MQRankSum
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ClippingRankSum
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BaseQRankSum
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MQ
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QD
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DP
type: SiteQuality
SIO_000300: 1.036316e6

VQSLOD
type: SiteQuality
SIO_000300: 2.09e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 1.062473438164046e-4
allele num: 9412
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
type: Population
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num of homozygotes: 0

InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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FS
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QD
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MQ
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MQRankSum
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DP
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

Latino
type: Population
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East Asian
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South Asian
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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European (Finnish)
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FS
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QD
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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DP
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 1.454122437109205e-4
allele num: 13754
num of homozygotes: 0

European (Finnish)
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Other
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East Asian
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Latino
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African
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European (Non-Finnish)
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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MQRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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MQ
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2740
bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1355
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.770083102493075e-4
allele num: 7220
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50144
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6246
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5138
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13176
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.591e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.545e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 9.06e-1

DP
type: SiteQuality
SIO_000300: 8.728e5

MQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

QD
type: SiteQuality
SIO_000300: 1.134e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

GenotypeQuality
all individuals: 150
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.5e0
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GenotypeQuality
all individuals: 400
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 889
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variant carriers: 0

GenotypeQuality
all individuals: 718
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15832
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.044495508669313e-4
allele num: 9574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.56e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

QD
type: SiteQuality
SIO_000300: 1.515e1

DP
type: SiteQuality
SIO_000300: 3.346422e6

VQSLOD
type: SiteQuality
SIO_000300: -7.252e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.82e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.816e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.8e-3

GenotypeQuality
all individuals: 776
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1210
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 887
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1206
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523647001462701e-5
allele num: 65632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.346e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.154e0

MQRankSum
type: SiteQuality
SIO_000300: 1.68e0

DP
type: SiteQuality
SIO_000300: 3.347635e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.06e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e-2

FS
type: SiteQuality
SIO_000300: 1.148e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

VQSLOD
type: SiteQuality
SIO_000300: 1.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

GenotypeQuality
all individuals: 95
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 510
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variant carriers: 0

GenotypeQuality
all individuals: 139
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GenotypeQuality
all individuals: 51
bin: 2.5e0
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GenotypeQuality
all individuals: 5303
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variant carriers: 1

GenotypeQuality
all individuals: 180
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variant carriers: 0

GenotypeQuality
all individuals: 724
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variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46677
bin: 9.75e1
variant carriers: 482

GenotypeQuality
all individuals: 337
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GenotypeQuality
all individuals: 921
bin: 8.25e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1260
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variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 8.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 41
allele frequency: 6.242577423185847e-4
allele num: 65678
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.024803387779795e-4
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

African
type: Population
allele count: 412
allele frequency: 4.303321495717569e-2
allele num: 9574
num of homozygotes: 10

Other
type: Population
allele count: 3
allele frequency: 3.386004514672686e-3
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.243756243756244e-5
allele num: 16016
num of homozygotes: 0

Latino
type: Population
allele count: 35
allele frequency: 3.035559410234172e-3
allele num: 11530
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.171e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.78e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.83e-1

DP
type: SiteQuality
SIO_000300: 3.374885e6

MQRankSum
type: SiteQuality
SIO_000300: 3.32e-1

QD
type: SiteQuality
SIO_000300: 1.424e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.68e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.17e0

GenotypeQuality
all individuals: 135
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
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variant carriers: 0

GenotypeQuality
all individuals: 5669
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variant carriers: 0

GenotypeQuality
all individuals: 146
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GenotypeQuality
all individuals: 897
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variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
all individuals: 437
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GenotypeQuality
all individuals: 1327
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variant carriers: 1

GenotypeQuality
all individuals: 678
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GenotypeQuality
all individuals: 919
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GenotypeQuality
all individuals: 54
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GenotypeQuality
all individuals: 46629
bin: 9.75e1
variant carriers: 384

GenotypeQuality
all individuals: 1193
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variant carriers: 0

GenotypeQuality
all individuals: 65
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variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.089392278650591e-5
allele num: 65688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

African
type: Population
allele count: 345
allele frequency: 3.602756892230576e-2
allele num: 9576
num of homozygotes: 10

South Asian
type: Population
allele count: 26
allele frequency: 1.61832441180132e-3
allele num: 16066
num of homozygotes: 1

Other
type: Population
allele count: 2
allele frequency: 2.257336343115124e-3
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 16
allele frequency: 1.387684301821336e-3
allele num: 11530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.21e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.56e0

MQRankSum
type: SiteQuality
SIO_000300: 2.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

DP
type: SiteQuality
SIO_000300: 3.377617e6

MQ
type: SiteQuality
SIO_000300: 5.946e1

QD
type: SiteQuality
SIO_000300: 1.435e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.72e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.56e0

GenotypeQuality
all individuals: 607
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
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GenotypeQuality
all individuals: 926
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GenotypeQuality
all individuals: 32
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GenotypeQuality
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GenotypeQuality
all individuals: 291
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 413
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GenotypeQuality
all individuals: 687
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521977352976988e-5
allele num: 65704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16096
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9574
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.626e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.59e-1

DP
type: SiteQuality
SIO_000300: 3.370564e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.44e0

QD
type: SiteQuality
SIO_000300: 1.278e1

MQRankSum
type: SiteQuality
SIO_000300: -6.2e-1

MQ
type: SiteQuality
SIO_000300: 5.853e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

GenotypeQuality
all individuals: 1198
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
all individuals: 619
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variant carriers: 0

GenotypeQuality
all individuals: 150
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 46535
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 28
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GenotypeQuality
all individuals: 104
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variant carriers: 0

GenotypeQuality
all individuals: 162
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16348
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.087682672233821e-4
allele num: 9580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65812
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.105e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e0

FS
type: SiteQuality
SIO_000300: 1.387e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

MQRankSum
type: SiteQuality
SIO_000300: 1.56e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.86e-1

DP
type: SiteQuality
SIO_000300: 3.383392e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.55e0

GenotypeQuality
all individuals: 1199
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
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GenotypeQuality
all individuals: 147
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GenotypeQuality
all individuals: 19
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GenotypeQuality
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GenotypeQuality
all individuals: 6805
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GenotypeQuality
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GenotypeQuality
all individuals: 30
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 96
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GenotypeQuality
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GenotypeQuality
all individuals: 454
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GenotypeQuality
all individuals: 690
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GenotypeQuality
all individuals: 46534
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GenotypeQuality
all individuals: 930
bin: 8.25e1
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GenotypeQuality
all individuals: 1425
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16360
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.087682672233821e-4
allele num: 9580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65822
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

QD
type: SiteQuality
SIO_000300: 1.159e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

MQ
type: SiteQuality
SIO_000300: 5.958e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.533e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.31e-1

FS
type: SiteQuality
SIO_000300: 1.078e1

DP
type: SiteQuality
SIO_000300: 3.38377e6

VQSLOD
type: SiteQuality
SIO_000300: -8.821e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e-1

GenotypeDepth
all individuals: 3189
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6940
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518003521768171e-5
allele num: 65876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.55e0

FS
type: SiteQuality
SIO_000300: 3.26e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.55e0

VQSLOD
type: SiteQuality
SIO_000300: -4.243e-1

DP
type: SiteQuality
SIO_000300: 3.386695e6

QD
type: SiteQuality
SIO_000300: 1.089e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.65e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 10

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517957436473481e-5
allele num: 65878
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.04675505931612e-3
allele num: 8598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-1

QD
type: SiteQuality
SIO_000300: 1.332e1

FS
type: SiteQuality
SIO_000300: 1.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.09e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.465e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.26e-1

DP
type: SiteQuality
SIO_000300: 3.389002e6

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1468
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.043187982474442e-4
allele num: 9586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65918
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.957e1

MQRankSum
type: SiteQuality
SIO_000300: -2.44e-1

QD
type: SiteQuality
SIO_000300: 1.607e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.115e0

FS
type: SiteQuality
SIO_000300: 1.864e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.94e-1

DP
type: SiteQuality
SIO_000300: 3.388439e6

GenotypeQuality
all individuals: 350
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 928
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516898246465627e-5
allele num: 65924
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.71e-1

FS
type: SiteQuality
SIO_000300: 2.99e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQ
type: SiteQuality
SIO_000300: 5.978e1

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.620000000000001e-1

DP
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SIO_000300: 3.388699e6

MQRankSum
type: SiteQuality
SIO_000300: -1.68e-1

QD
type: SiteQuality
SIO_000300: 1.296e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.289e0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 28

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65944
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

Latino
type: Population
allele count: 28
allele frequency: 2.426763737216155e-3
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

QD
type: SiteQuality
SIO_000300: 1.335e1

FS
type: SiteQuality
SIO_000300: 5.42e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.63e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

VQSLOD
type: SiteQuality
SIO_000300: 8.29e-1

DP
type: SiteQuality
SIO_000300: 3.391586e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 7

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9590
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.061603324334981e-4
allele num: 65938
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.107e0

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.961e1

DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.343e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.33e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.580581582218988e-5
allele num: 65958
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.042100875364735e-4
allele num: 9596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.069434328720563e-5
allele num: 16476
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.962e1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.811e0

BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 1.19e1

VQSLOD
type: SiteQuality
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DP
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.56e-1