22-17688130-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688130
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688130
    reference: chr 22
allele count: 1
allele frequency: 8.241577108195424e-6
allele num: 121336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.373G>A
  hgvsp: ENSP00000262607.2:p.Val125Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.373G>A
  hgvsp: ENSP00000392078.1:p.Val125Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.373G>A
  hgvsp: ENSP00000442482.1:p.Val125Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.373G>A
  hgvsp: ENSP00000382733.1:p.Val125Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.373G>A
  hgvsp: ENSP00000382731.2:p.Val125Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.247G>A
  hgvsp: ENSP00000406443.2:p.Val83Met
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18159
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7890
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1749
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val125Met
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: MQ

22-17688140-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688140
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688140
    reference: chr 22
allele count: 10
allele frequency: 8.24565454005739e-5
allele num: 121276
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.363G>A
  hgvsp: ENSP00000262607.2:p.Met121Ile
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.363G>A
  hgvsp: ENSP00000382731.2:p.Met121Ile
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.363G>A
  hgvsp: ENSP00000392078.1:p.Met121Ile
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.363G>A
  hgvsp: ENSP00000442482.1:p.Met121Ile
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.363G>A
  hgvsp: ENSP00000382733.1:p.Met121Ile
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.237G>A
  hgvsp: ENSP00000406443.2:p.Met79Ile
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18172
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7705
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27831
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1748
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40294
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Met121Ile
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS

22-17688141-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688141
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688141
    reference: chr 22
allele count: 19
allele frequency: 1.566855239069123e-4
allele num: 121262
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.236T>C
  hgvsp: ENSP00000406443.2:p.Met79Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.362T>C
  hgvsp: ENSP00000262607.2:p.Met121Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.362T>C
  hgvsp: ENSP00000392078.1:p.Met121Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.362T>C
  hgvsp: ENSP00000382733.1:p.Met121Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.362T>C
  hgvsp: ENSP00000442482.1:p.Met121Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.362T>C
  hgvsp: ENSP00000382731.2:p.Met121Thr
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27818
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7693
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1747
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7870
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2452
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Met121Thr
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

22-17688142-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688142
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688142
    reference: chr 22
allele count: 1
allele frequency: 8.246606521416436e-6
allele num: 121262
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.361A>G
  hgvsp: ENSP00000442482.1:p.Met121Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.235A>G
  hgvsp: ENSP00000406443.2:p.Met79Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.361A>G
  hgvsp: ENSP00000392078.1:p.Met121Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.361A>G
  hgvsp: ENSP00000262607.2:p.Met121Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.361A>G
  hgvsp: ENSP00000382731.2:p.Met121Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.361A>G
  hgvsp: ENSP00000382733.1:p.Met121Val
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2689
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27818
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7706
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2453
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40309
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3597
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Met121Val
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

22-17688144-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688144
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688144
    reference: chr 22
allele count: 2
allele frequency: 1.649675014022238e-5
allele num: 121236
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.359C>T
  hgvsp: ENSP00000442482.1:p.Thr120Ile
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.359C>T
  hgvsp: ENSP00000392078.1:p.Thr120Ile
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.233C>T
  hgvsp: ENSP00000406443.2:p.Thr78Ile
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.359C>T
  hgvsp: ENSP00000262607.2:p.Thr120Ile
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.359C>T
  hgvsp: ENSP00000382731.2:p.Thr120Ile
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.359C>T
  hgvsp: ENSP00000382733.1:p.Thr120Ile
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7701
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7871
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2798
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3595
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Thr120Ile
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

22-17688145-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688145
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688145
    reference: chr 22
allele count: 1
allele frequency: 8.249327679794096e-6
allele num: 121222
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.358A>C
  hgvsp: ENSP00000382731.2:p.Thr120Pro
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.358A>C
  hgvsp: ENSP00000392078.1:p.Thr120Pro
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.358A>C
  hgvsp: ENSP00000262607.2:p.Thr120Pro
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.358A>C
  hgvsp: ENSP00000382733.1:p.Thr120Pro
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.358A>C
  hgvsp: ENSP00000442482.1:p.Thr120Pro
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.232A>C
  hgvsp: ENSP00000406443.2:p.Thr78Pro
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7701
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27789
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18173
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2798
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40270
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1746
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr120Pro
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/22-17688147-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688147
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688147
    reference: chr 22
allele count: 2
allele frequency: 1.650056101907465e-5
allele num: 121208
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.356T>G
  hgvsp: ENSP00000382731.2:p.Val119Gly
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.356T>G
  hgvsp: ENSP00000392078.1:p.Val119Gly
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.356T>G
  hgvsp: ENSP00000262607.2:p.Val119Gly
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.230T>G
  hgvsp: ENSP00000406443.2:p.Val77Gly
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.356T>G
  hgvsp: ENSP00000382733.1:p.Val119Gly
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.356T>G
  hgvsp: ENSP00000442482.1:p.Val119Gly
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7699
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1746
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2453
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val119Gly
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

22-17688148-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688148
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688148
    reference: chr 22
allele count: 2
allele frequency: 1.650382888830209e-5
allele num: 121184
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.355G>A
  hgvsp: ENSP00000382733.1:p.Val119Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.355G>A
  hgvsp: ENSP00000262607.2:p.Val119Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.355G>A
  hgvsp: ENSP00000392078.1:p.Val119Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.355G>A
  hgvsp: ENSP00000442482.1:p.Val119Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.355G>A
  hgvsp: ENSP00000382731.2:p.Val119Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.229G>A
  hgvsp: ENSP00000406443.2:p.Val77Met
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7701
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40202
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3594
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1745
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val119Met
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ

22-17688149-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688149
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688149
    reference: chr 22
allele count: 5
allele frequency: 4.126433935792688e-5
allele num: 121170
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.354C>T
  hgvsp: ENST00000543038.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.354C>T
  hgvsp: ENST00000262607.3:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.228C>T
  hgvsp: ENST00000449907.2:c.228C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.354C>T
  hgvsp: ENST00000441548.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.354C>T
  hgvsp: ENST00000399839.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.354C>T
  hgvsp: ENST00000399837.2:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2688
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18156
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27741
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7690
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2449
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40192
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ile118Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

22-17688164-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688164
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688164
    reference: chr 22
allele count: 1
allele frequency: 8.286514526259965e-6
allele num: 120678
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.339C>T
  hgvsp: ENST00000262607.3:c.339C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.213C>T
  hgvsp: ENST00000449907.2:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.339C>T
  hgvsp: ENST00000543038.1:c.339C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.339C>T
  hgvsp: ENST00000399839.1:c.339C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.339C>T
  hgvsp: ENST00000399837.2:c.339C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.339C>T
  hgvsp: ENST00000441548.1:c.339C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27300
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17994
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1737
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2425
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7777
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu113Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

22-17688167-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688167
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688167
    reference: chr 22
allele count: 2
allele frequency: 1.659668398254029e-5
allele num: 120506
alternate allele: C
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.336C>G
  hgvsp: ENSP00000392078.1:p.His112Gln
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.336C>G
  hgvsp: ENSP00000442482.1:p.His112Gln
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.336C>G
  hgvsp: ENSP00000382731.2:p.His112Gln
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.336C>G
  hgvsp: ENSP00000382733.1:p.His112Gln
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.210C>G
  hgvsp: ENSP00000406443.2:p.His70Gln
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.336C>G
  hgvsp: ENSP00000262607.2:p.His112Gln
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17902
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27130
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2422
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7747
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
hgvs: p.His112Gln
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD

22-17688168-T-TG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688168
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688169
    reference: chr 22
allele count: 1
allele frequency: 8.298204268596276e-6
allele num: 120508
alternate allele: TG
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.334dupC
  hgvsp: ENSP00000262607.2:p.His112ProfsTer4
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.334dupC
  hgvsp: ENSP00000382733.1:p.His112ProfsTer4
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.334dupC
  hgvsp: ENSP00000442482.1:p.His112ProfsTer4
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.334dupC
  hgvsp: ENSP00000392078.1:p.His112ProfsTer4
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.334dupC
  hgvsp: ENSP00000382731.2:p.His112ProfsTer4
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.208dupC
  hgvsp: ENSP00000406443.2:p.His70ProfsTer4
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27131
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7635
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7751
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 944
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2425
  bin: 7.25e1
  variant carriers: 0
hgvs: p.His112ProfsTer4
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

22-17688169-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688169
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688169
    reference: chr 22
allele count: 1
allele frequency: 8.302475798283047e-6
allele num: 120446
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.334C>T
  hgvsp: ENSP00000442482.1:p.His112Tyr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.334C>T
  hgvsp: ENSP00000262607.2:p.His112Tyr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.334C>T
  hgvsp: ENSP00000382731.2:p.His112Tyr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.334C>T
  hgvsp: ENSP00000392078.1:p.His112Tyr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.334C>T
  hgvsp: ENSP00000382733.1:p.His112Tyr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.208C>T
  hgvsp: ENSP00000406443.2:p.His70Tyr
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7632
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17887
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3588
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 2.25e1
  variant carriers: 0
hgvs: p.His112Tyr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

22-17688173-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688173
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688173
    reference: chr 22
allele count: 1
allele frequency: 8.335556148306214e-6
allele num: 119968
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.330C>G
  hgvsp: ENST00000262607.3:c.330C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.330C>G
  hgvsp: ENST00000543038.1:c.330C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.330C>G
  hgvsp: ENST00000399839.1:c.330C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.204C>G
  hgvsp: ENST00000449907.2:c.204C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.330C>G
  hgvsp: ENST00000399837.2:c.330C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.330C>G
  hgvsp: ENST00000441548.1:c.330C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7588
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17706
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26600
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2671
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1535
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2401
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38607
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala110Ala
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

22-17688174-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688174
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688174
    reference: chr 22
allele count: 1
allele frequency: 8.336668000533546e-6
allele num: 119952
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.329C>T
  hgvsp: ENSP00000382733.1:p.Ala110Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.329C>T
  hgvsp: ENSP00000442482.1:p.Ala110Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.329C>T
  hgvsp: ENSP00000262607.2:p.Ala110Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.329C>T
  hgvsp: ENSP00000392078.1:p.Ala110Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.329C>T
  hgvsp: ENSP00000382731.2:p.Ala110Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.203C>T
  hgvsp: ENSP00000406443.2:p.Ala68Val
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17701
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26602
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1545
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2401
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38641
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala110Val
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

22-17688188-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688188
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688188
    reference: chr 22
allele count: 1
allele frequency: 8.432271991365354e-6
allele num: 118592
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.323-8C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.323-8C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.323-8C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.323-8C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.323-8C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.197-8C>T
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7438
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1720
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7495
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36795
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2370
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 3.25e1
  variant carriers: 0
hgvs: c.323-8C>T
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

22-17688196-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688196
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688196
    reference: chr 22
allele count: 7
allele frequency: 5.955014121890632e-5
allele num: 117548
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.323-16C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.197-16C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.323-16C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.323-16C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.323-16C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.323-16C>T
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23965
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7283
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 941
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34948
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3583
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3888
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

22-17688213-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688213
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688213
    reference: chr 22
allele count: 4876
allele frequency: 4.22157192083254e-2
allele num: 115502
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.323-33C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.323-33C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.323-33C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.197-33C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.323-33C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.323-33C>T
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 14666
  bin: 2.75e1
  variant carriers: 647
genotype depth: GenotypeDepth
  all individuals: 18301
  bin: 2.25e1
  variant carriers: 419
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 4.75e1
  variant carriers: 397
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 1.75e1
  variant carriers: 230
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 6.25e1
  variant carriers: 119
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.75e1
  variant carriers: 171
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 7.5e0
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 3.75e1
  variant carriers: 696
genotype depth: GenotypeDepth
  all individuals: 5732
  bin: 1.25e1
  variant carriers: 136
genotype depth: GenotypeDepth
  all individuals: 6840
  bin: 3.25e1
  variant carriers: 785
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 1845
  bin: 4.25e1
  variant carriers: 590
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 6.75e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.25e1
  variant carriers: 281
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26545
  bin: 6.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1924
  bin: 7.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 9.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 1655
  bin: 3.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 4.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2221
  bin: 7.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 2272
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1394
  bin: 8.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 1572
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 4.25e1
  variant carriers: 7
num of homozygotes: 124
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum

22-17688214-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688214
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688214
    reference: chr 22
allele count: 2
allele frequency: 1.734274466277033e-5
allele num: 115322
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.197-34C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.323-34C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.323-34C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.323-34C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.323-34C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.323-34C>T
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15450
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6097
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18003
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6901
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4796
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2510
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1926
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3346
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1735
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28023
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

22-17688215-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688215
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688215
    reference: chr 22
allele count: 4
allele frequency: 3.470956769233439e-5
allele num: 115242
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.323-35C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.323-35C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.197-35C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.323-35C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.323-35C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.323-35C>T
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15206
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5324
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6753
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6473
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2129
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2763
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 773
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27504
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1810
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2491
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD

22-17688215-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688215
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688215
    reference: chr 22
allele count: 1
allele frequency: 8.677391923083599e-6
allele num: 115242
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.323-35C>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.323-35C>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.323-35C>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.197-35C>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.323-35C>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.323-35C>G
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5324
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6753
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1810
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2763
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 773
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5423
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2096
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1581
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27504
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 957
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6473
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

22-17688216-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688216
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688216
    reference: chr 22
allele count: 3
allele frequency: 2.609603340292276e-5
allele num: 114960
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.323-36A>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.323-36A>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.323-36A>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.323-36A>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.197-36A>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.323-36A>G
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17076
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2443
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14581
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6671
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6553
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1578
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3345
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2616
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1962
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 907
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3164
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5407
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2077
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum

22-17688220-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688220
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688220
    reference: chr 22
allele count: 1
allele frequency: 8.740341922175995e-6
allele num: 114412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.323-40C>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.323-40C>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.323-40C>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.197-40C>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.323-40C>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.323-40C>G
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8733
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13647
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3662
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1562
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2124
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23360
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5328
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1432
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1463
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3336
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/22-17688223-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688223
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688223
    reference: chr 22
allele count: 1
allele frequency: 8.791208791208792e-6
allele num: 113750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.323-43G>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.323-43G>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.197-43G>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.323-43G>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.323-43G>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.323-43G>T
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10067
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5892
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16374
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2540
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5876
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2130
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2414
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4039
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2560
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1011
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1986
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19852
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

22-17688226-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17688226
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17688226
    reference: chr 22
allele count: 1
allele frequency: 8.854258898530193e-6
allele num: 112940
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.323-46A>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.323-46A>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.197-46A>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.323-46A>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.323-46A>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.323-46A>G
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3227
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5807
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2460
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9966
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18011
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4838
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1059
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1540
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4460
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1050
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4203
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5373
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4493
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15383
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP

22-17690196-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690196
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690196
    reference: chr 22
allele count: 1
allele frequency: 8.870910510254773e-6
allele num: 112728
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.196+50C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.322+50C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.322+50C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.322+50C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.322+50C>T
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.322+50C>T
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4537
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4933
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1977
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10533
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1092
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19678
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

22-17690204-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690204
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690205
    reference: chr 22
allele count: 1
allele frequency: 8.847521809141259e-6
allele num: 113026
alternate allele: CT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.322+41dupA
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.322+41dupA
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.196+41dupA
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.322+41dupA
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.322+41dupA
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.322+41dupA
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6729
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10377
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5792
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4552
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8929
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3925
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2648
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3773
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11998
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2472
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/22-17690222-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690222
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690222
    reference: chr 22
allele count: 3
allele frequency: 2.62118617411666e-5
allele num: 114452
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.322+24T>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.322+24T>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.322+24T>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.196+24T>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.322+24T>G
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.322+24T>G
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8994
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6307
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10632
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11918
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4571
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6766
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3988
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3553
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2969
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13100
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3811
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

22-17690228-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690228
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690228
    reference: chr 22
allele count: 1
allele frequency: 8.674230595746157e-6
allele num: 115284
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.322+18G>A
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.322+18G>A
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.196+18G>A
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.322+18G>A
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.322+18G>A
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.322+18G>A
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12030
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10682
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9002
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6773
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4569
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13724
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2985
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5255
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2519
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

22-17690231-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690231
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690231
    reference: chr 22
allele count: 2
allele frequency: 1.726996407847472e-5
allele num: 115808
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.322+15G>A
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.322+15G>A
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.322+15G>A
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.322+15G>A
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.322+15G>A
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.196+15G>A
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9002
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2637
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6773
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10701
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4571
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5303
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4012
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3001
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13809
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3830
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

22-17690250-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690250
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690250
    reference: chr 22
allele count: 1
allele frequency: 8.36470096194061e-6
allele num: 119550
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.318A>T
  hgvsp: ENST00000262607.3:c.318A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.318A>T
  hgvsp: ENST00000543038.1:c.318A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.318A>T
  hgvsp: ENST00000399839.1:c.318A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.192A>T
  hgvsp: ENST00000449907.2:c.192A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.318A>T
  hgvsp: ENST00000441548.1:c.318A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.318A>T
  hgvsp: ENST00000399837.2:c.318A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12651
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4572
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9026
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10875
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19764
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4144
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5650
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16314
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro106Pro
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

22-17690252-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690252
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690252
    reference: chr 22
allele count: 1
allele frequency: 8.345155637152633e-6
allele num: 119830
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.190C>T
  hgvsp: ENSP00000406443.2:p.Pro64Ser
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.316C>T
  hgvsp: ENSP00000442482.1:p.Pro106Ser
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.316C>T
  hgvsp: ENSP00000392078.1:p.Pro106Ser
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.316C>T
  hgvsp: ENSP00000382733.1:p.Pro106Ser
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.316C>T
  hgvsp: ENSP00000262607.2:p.Pro106Ser
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.316C>T
  hgvsp: ENSP00000382731.2:p.Pro106Ser
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6777
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12717
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4572
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10907
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9587
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16486
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3896
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro106Ser
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

22-17690263-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690263
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690263
    reference: chr 22
allele count: 1
allele frequency: 8.269383434771103e-6
allele num: 120928
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.305T>C
  hgvsp: ENSP00000382731.2:p.Leu102Pro
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.305T>C
  hgvsp: ENSP00000382733.1:p.Leu102Pro
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.179T>C
  hgvsp: ENSP00000406443.2:p.Leu60Pro
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.305T>C
  hgvsp: ENSP00000442482.1:p.Leu102Pro
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.305T>C
  hgvsp: ENSP00000262607.2:p.Leu102Pro
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.305T>C
  hgvsp: ENSP00000392078.1:p.Leu102Pro
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11116
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13020
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9054
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4258
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19786
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu102Pro
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP

22-17690268-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690268
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690268
    reference: chr 22
allele count: 1
allele frequency: 8.256683785524381e-6
allele num: 121114
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.300T>C
  hgvsp: ENST00000399839.1:c.300T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.300T>C
  hgvsp: ENST00000441548.1:c.300T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.300T>C
  hgvsp: ENST00000399837.2:c.300T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.300T>C
  hgvsp: ENST00000262607.3:c.300T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.300T>C
  hgvsp: ENST00000543038.1:c.300T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.174T>C
  hgvsp: ENST00000449907.2:c.174T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9053
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13076
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6791
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4010
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4268
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3207
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5864
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19791
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn100Asn
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff

22-17690276-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690276
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690276
    reference: chr 22
allele count: 1
allele frequency: 8.247014580721778e-6
allele num: 121256
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.292G>A
  hgvsp: ENSP00000382731.2:p.Val98Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.292G>A
  hgvsp: ENSP00000382733.1:p.Val98Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.292G>A
  hgvsp: ENSP00000392078.1:p.Val98Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.292G>A
  hgvsp: ENSP00000442482.1:p.Val98Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.292G>A
  hgvsp: ENSP00000262607.2:p.Val98Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.166G>A
  hgvsp: ENSP00000406443.2:p.Val56Met
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13116
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9933
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9069
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6799
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5887
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4024
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3634
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val98Met
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ

22-17690279-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690279
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690279
    reference: chr 22
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.289C>G
  hgvsp: ENSP00000442482.1:p.Gln97Glu
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.289C>G
  hgvsp: ENSP00000392078.1:p.Gln97Glu
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.289C>G
  hgvsp: ENSP00000382731.2:p.Gln97Glu
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.163C>G
  hgvsp: ENSP00000406443.2:p.Gln55Glu
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.289C>G
  hgvsp: ENSP00000262607.2:p.Gln97Glu
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.289C>G
  hgvsp: ENSP00000382733.1:p.Gln97Glu
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6804
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13131
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9073
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17062
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3231
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3635
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4037
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gln97Glu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

22-17690282-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690282
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690282
    reference: chr 22
allele count: 1
allele frequency: 8.24279991427488e-6
allele num: 121318
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.286A>G
  hgvsp: ENSP00000262607.2:p.Ser96Gly
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.160A>G
  hgvsp: ENSP00000406443.2:p.Ser54Gly
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.286A>G
  hgvsp: ENSP00000442482.1:p.Ser96Gly
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.286A>G
  hgvsp: ENSP00000382731.2:p.Ser96Gly
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.286A>G
  hgvsp: ENSP00000392078.1:p.Ser96Gly
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.286A>G
  hgvsp: ENSP00000382733.1:p.Ser96Gly
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9913
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6810
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2626
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3639
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17066
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser96Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD

22-17690286-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690286
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690286
    reference: chr 22
allele count: 1
allele frequency: 8.241984669908513e-6
allele num: 121330
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.282G>C
  hgvsp: ENSP00000382733.1:p.Glu94Asp
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.282G>C
  hgvsp: ENSP00000382731.2:p.Glu94Asp
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.282G>C
  hgvsp: ENSP00000262607.2:p.Glu94Asp
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.282G>C
  hgvsp: ENSP00000392078.1:p.Glu94Asp
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.156G>C
  hgvsp: ENSP00000406443.2:p.Glu52Asp
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.282G>C
  hgvsp: ENSP00000442482.1:p.Glu94Asp
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13136
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11251
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2627
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5896
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19817
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Glu94Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ

22-17690290-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690290
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690290
    reference: chr 22
allele count: 2
allele frequency: 1.648179585647652e-5
allele num: 121346
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.278T>C
  hgvsp: ENSP00000442482.1:p.Ile93Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.278T>C
  hgvsp: ENSP00000392078.1:p.Ile93Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.152T>C
  hgvsp: ENSP00000406443.2:p.Ile51Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.278T>C
  hgvsp: ENSP00000262607.2:p.Ile93Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.278T>C
  hgvsp: ENSP00000382733.1:p.Ile93Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.278T>C
  hgvsp: ENSP00000382731.2:p.Ile93Thr
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9901
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13134
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4040
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4294
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5896
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile93Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

22-17690296-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690296
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690296
    reference: chr 22
allele count: 9
allele frequency: 7.416196974191635e-5
allele num: 121356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.272A>G
  hgvsp: ENSP00000382731.2:p.His91Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.146A>G
  hgvsp: ENSP00000406443.2:p.His49Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.272A>G
  hgvsp: ENSP00000382733.1:p.His91Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.272A>G
  hgvsp: ENSP00000442482.1:p.His91Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.272A>G
  hgvsp: ENSP00000262607.2:p.His91Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.272A>G
  hgvsp: ENSP00000392078.1:p.His91Arg
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6817
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11267
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4573
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5897
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4040
  bin: 8.25e1
  variant carriers: 0
hgvs: p.His91Arg
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

22-17690298-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690298
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690298
    reference: chr 22
allele count: 3
allele frequency: 2.471861971227527e-5
allele num: 121366
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.270G>A
  hgvsp: ENST00000441548.1:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.270G>A
  hgvsp: ENST00000262607.3:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.144G>A
  hgvsp: ENST00000449907.2:c.144G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.270G>A
  hgvsp: ENST00000399839.1:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.270G>A
  hgvsp: ENST00000543038.1:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.270G>A
  hgvsp: ENST00000399837.2:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13154
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9082
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11268
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2625
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17084
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4299
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Lys90Lys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

22-17690302-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690302
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690302
    reference: chr 22
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.140C>T
  hgvsp: ENSP00000406443.2:p.Ala47Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.266C>T
  hgvsp: ENSP00000442482.1:p.Ala89Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.266C>T
  hgvsp: ENSP00000382733.1:p.Ala89Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.266C>T
  hgvsp: ENSP00000262607.2:p.Ala89Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.266C>T
  hgvsp: ENSP00000392078.1:p.Ala89Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.266C>T
  hgvsp: ENSP00000382731.2:p.Ala89Val
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13156
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9893
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6818
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11267
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4576
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4301
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2625
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5898
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3646
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala89Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

22-17690314-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690314
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690314
    reference: chr 22
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.254A>G
  hgvsp: ENSP00000442482.1:p.His85Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.254A>G
  hgvsp: ENSP00000262607.2:p.His85Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.254A>G
  hgvsp: ENSP00000382731.2:p.His85Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.254A>G
  hgvsp: ENSP00000392078.1:p.His85Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.254A>G
  hgvsp: ENSP00000382733.1:p.His85Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.128A>G
  hgvsp: ENSP00000406443.2:p.His43Arg
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13157
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9868
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11289
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4578
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5896
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3647
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4043
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3234
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19826
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4304
  bin: 7.75e1
  variant carriers: 0
hgvs: p.His85Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

22-17690316-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690316
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690316
    reference: chr 22
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.252G>A
  hgvsp: ENSP00000382731.2:p.Met84Ile
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.252G>A
  hgvsp: ENSP00000382733.1:p.Met84Ile
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.126G>A
  hgvsp: ENSP00000406443.2:p.Met42Ile
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.252G>A
  hgvsp: ENSP00000442482.1:p.Met84Ile
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.252G>A
  hgvsp: ENSP00000262607.2:p.Met84Ile
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.252G>A
  hgvsp: ENSP00000392078.1:p.Met84Ile
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13154
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9084
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6824
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11285
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5894
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2627
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3648
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3231
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4045
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19828
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Met84Ile
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

22-17690318-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690318
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690318
    reference: chr 22
allele count: 19
allele frequency: 1.565203064502842e-4
allele num: 121390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.250A>G
  hgvsp: ENSP00000382731.2:p.Met84Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.250A>G
  hgvsp: ENSP00000442482.1:p.Met84Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.250A>G
  hgvsp: ENSP00000262607.2:p.Met84Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.250A>G
  hgvsp: ENSP00000392078.1:p.Met84Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.124A>G
  hgvsp: ENSP00000406443.2:p.Met42Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.250A>G
  hgvsp: ENSP00000382733.1:p.Met84Val
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9858
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9082
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6824
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4576
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17066
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2627
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19839
  bin: 9.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4297
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Met84Val
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

22-17690320-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690320
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690320
    reference: chr 22
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.248G>C
  hgvsp: ENSP00000262607.2:p.Ser83Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.248G>C
  hgvsp: ENSP00000392078.1:p.Ser83Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.122G>C
  hgvsp: ENSP00000406443.2:p.Ser41Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.248G>C
  hgvsp: ENSP00000442482.1:p.Ser83Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.248G>C
  hgvsp: ENSP00000382733.1:p.Ser83Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.248G>C
  hgvsp: ENSP00000382731.2:p.Ser83Thr
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11289
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9084
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13157
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4578
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6826
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2632
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4047
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19831
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4297
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser83Thr
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

22-17690324-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690324
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690324
    reference: chr 22
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.244C>T
  hgvsp: ENSP00000392078.1:p.Pro82Ser
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.118C>T
  hgvsp: ENSP00000406443.2:p.Pro40Ser
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.244C>T
  hgvsp: ENSP00000382733.1:p.Pro82Ser
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.244C>T
  hgvsp: ENSP00000442482.1:p.Pro82Ser
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.244C>T
  hgvsp: ENSP00000262607.2:p.Pro82Ser
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.244C>T
  hgvsp: ENSP00000382731.2:p.Pro82Ser
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4579
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9847
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9085
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6821
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3227
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3649
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17055
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2629
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro82Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ

22-17690324-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690324
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690324
    reference: chr 22
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.244C>A
  hgvsp: ENSP00000382733.1:p.Pro82Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.244C>A
  hgvsp: ENSP00000442482.1:p.Pro82Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.118C>A
  hgvsp: ENSP00000406443.2:p.Pro40Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.244C>A
  hgvsp: ENSP00000262607.2:p.Pro82Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.244C>A
  hgvsp: ENSP00000382731.2:p.Pro82Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.244C>A
  hgvsp: ENSP00000392078.1:p.Pro82Thr
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4579
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9085
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9847
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4047
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3649
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3227
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro82Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

22-17690331-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690331
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690331
    reference: chr 22
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.237A>G
  hgvsp: ENSP00000382733.1:p.Ile79Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.237A>G
  hgvsp: ENSP00000262607.2:p.Ile79Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.111A>G
  hgvsp: ENSP00000406443.2:p.Ile37Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.237A>G
  hgvsp: ENSP00000442482.1:p.Ile79Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.237A>G
  hgvsp: ENSP00000382731.2:p.Ile79Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.237A>G
  hgvsp: ENSP00000392078.1:p.Ile79Met
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9825
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4579
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2632
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9088
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11294
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13158
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3227
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5899
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3649
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2629
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17025
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile79Met
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

22-17690336-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690336
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690336
    reference: chr 22
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.232C>T
  hgvsp: ENST00000399837.2:c.232C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.232C>T
  hgvsp: ENST00000441548.1:c.232C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.106C>T
  hgvsp: ENST00000449907.2:c.106C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.232C>T
  hgvsp: ENST00000262607.3:c.232C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.232C>T
  hgvsp: ENST00000543038.1:c.232C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.232C>T
  hgvsp: ENST00000399839.1:c.232C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4581
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6823
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9085
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13158
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5893
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4048
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16967
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3221
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu78Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS

22-17690341-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690341
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690341
    reference: chr 22
allele count: 3
allele frequency: 2.471413978317461e-5
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.227G>A
  hgvsp: ENSP00000442482.1:p.Arg76Lys
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.227G>A
  hgvsp: ENSP00000392078.1:p.Arg76Lys
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.227G>A
  hgvsp: ENSP00000382731.2:p.Arg76Lys
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.227G>A
  hgvsp: ENSP00000262607.2:p.Arg76Lys
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.101G>A
  hgvsp: ENSP00000406443.2:p.Arg34Lys
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.227G>A
  hgvsp: ENSP00000382733.1:p.Arg76Lys
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9088
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2632
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13152
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6824
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9780
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4584
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4296
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3648
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19834
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg76Lys
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

22-17690353-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690353
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690353
    reference: chr 22
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.215A>G
  hgvsp: ENSP00000392078.1:p.Lys72Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.215A>G
  hgvsp: ENSP00000262607.2:p.Lys72Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.215A>G
  hgvsp: ENSP00000382731.2:p.Lys72Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.215A>G
  hgvsp: ENSP00000382733.1:p.Lys72Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.89A>G
  hgvsp: ENSP00000406443.2:p.Lys30Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.215A>G
  hgvsp: ENSP00000442482.1:p.Lys72Arg
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6827
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13144
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4585
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16971
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4044
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3647
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5875
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Lys72Arg
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

22-17690355-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690355
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690355
    reference: chr 22
allele count: 5
allele frequency: 4.119159032491926e-5
allele num: 121384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.213G>A
  hgvsp: ENSP00000382731.2:p.Met71Ile
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.213G>A
  hgvsp: ENSP00000262607.2:p.Met71Ile
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.213G>A
  hgvsp: ENSP00000392078.1:p.Met71Ile
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.213G>A
  hgvsp: ENSP00000382733.1:p.Met71Ile
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.213G>A
  hgvsp: ENSP00000442482.1:p.Met71Ile
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.87G>A
  hgvsp: ENSP00000406443.2:p.Met29Ile
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6825
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13138
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9090
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4587
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9746
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2629
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4297
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16948
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Met71Ile
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum

22-17690363-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690363
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690363
    reference: chr 22
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.205G>A
  hgvsp: ENSP00000262607.2:p.Ala69Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.205G>A
  hgvsp: ENSP00000382731.2:p.Ala69Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.205G>A
  hgvsp: ENSP00000392078.1:p.Ala69Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.205G>A
  hgvsp: ENSP00000382733.1:p.Ala69Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.205G>A
  hgvsp: ENSP00000442482.1:p.Ala69Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.79G>A
  hgvsp: ENSP00000406443.2:p.Ala27Thr
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6826
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9754
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4586
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9088
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13100
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2627
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4039
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5839
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3203
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3645
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala69Thr
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

22-17690374-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690374
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690374
    reference: chr 22
allele count: 56
allele frequency: 4.613838219058448e-4
allele num: 121374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.194C>T
  hgvsp: ENSP00000382731.2:p.Thr65Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.194C>T
  hgvsp: ENSP00000392078.1:p.Thr65Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.68C>T
  hgvsp: ENSP00000406443.2:p.Thr23Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.194C>T
  hgvsp: ENSP00000442482.1:p.Thr65Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.194C>T
  hgvsp: ENSP00000262607.2:p.Thr65Met
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.194C>T
  hgvsp: ENSP00000382733.1:p.Thr65Met
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11281
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6836
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9753
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9082
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4586
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 13048
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3196
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16877
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4041
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr65Met
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD

22-17690378-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690378
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690378
    reference: chr 22
allele count: 6
allele frequency: 4.943316635908252e-5
allele num: 121376
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.190A>G
  hgvsp: ENSP00000262607.2:p.Met64Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.190A>G
  hgvsp: ENSP00000392078.1:p.Met64Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.190A>G
  hgvsp: ENSP00000442482.1:p.Met64Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.190A>G
  hgvsp: ENSP00000382733.1:p.Met64Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.64A>G
  hgvsp: ENSP00000406443.2:p.Met22Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.190A>G
  hgvsp: ENSP00000382731.2:p.Met64Val
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4581
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6835
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9078
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13040
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11284
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4295
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5813
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4050
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Met64Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP

22-17690393-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690393
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690393
    reference: chr 22
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.175G>A
  hgvsp: ENSP00000442482.1:p.Ala59Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.175G>A
  hgvsp: ENSP00000382731.2:p.Ala59Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.175G>A
  hgvsp: ENSP00000392078.1:p.Ala59Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.49G>A
  hgvsp: ENSP00000406443.2:p.Ala17Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.175G>A
  hgvsp: ENSP00000262607.2:p.Ala59Thr
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.175G>A
  hgvsp: ENSP00000382733.1:p.Ala59Thr
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12956
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4585
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6845
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9688
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19865
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4284
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala59Thr
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum

22-17690404-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690404
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690404
    reference: chr 22
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.164A>G
  hgvsp: ENSP00000382731.2:p.Lys55Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.164A>G
  hgvsp: ENSP00000382733.1:p.Lys55Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.38A>G
  hgvsp: ENSP00000406443.2:p.Lys13Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.164A>G
  hgvsp: ENSP00000262607.2:p.Lys55Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.164A>G
  hgvsp: ENSP00000392078.1:p.Lys55Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.164A>G
  hgvsp: ENSP00000442482.1:p.Lys55Arg
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4583
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6850
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12906
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9086
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11254
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3649
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16578
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Lys55Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

22-17690409-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690409
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690409
    reference: chr 22
allele count: 52626
allele frequency: 4.341004701806483e-1
allele num: 121230
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.159C>T
  hgvsp: ENST00000262607.3:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.159C>T
  hgvsp: ENST00000441548.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.159C>T
  hgvsp: ENST00000399837.2:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.159C>T
  hgvsp: ENST00000399839.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.159C>T
  hgvsp: ENST00000543038.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.33C>T
  hgvsp: ENST00000449907.2:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 3.75e1
  variant carriers: 3729
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.25e1
  variant carriers: 260
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.75e1
  variant carriers: 155
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 3141
  bin: 6.25e1
  variant carriers: 3009
genotype depth: GenotypeDepth
  all individuals: 6420
  bin: 4.75e1
  variant carriers: 5464
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8122
  bin: 2.75e1
  variant carriers: 1196
genotype depth: GenotypeDepth
  all individuals: 6406
  bin: 4.25e1
  variant carriers: 4924
genotype depth: GenotypeDepth
  all individuals: 4211
  bin: 5.75e1
  variant carriers: 3936
genotype depth: GenotypeDepth
  all individuals: 5289
  bin: 5.25e1
  variant carriers: 4795
genotype depth: GenotypeDepth
  all individuals: 6136
  bin: 3.25e1
  variant carriers: 2467
genotype depth: GenotypeDepth
  all individuals: 4648
  bin: 2.25e1
  variant carriers: 503
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 7.25e1
  variant carriers: 1284
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 7.75e1
  variant carriers: 848
genotype depth: GenotypeDepth
  all individuals: 4587
  bin: 9.75e1
  variant carriers: 4559
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 6.75e1
  variant carriers: 2020
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 8.75e1
  variant carriers: 319
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 547
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 1272
  bin: 7.75e1
  variant carriers: 125
genotype quality: GenotypeQuality
  all individuals: 1097
  bin: 7.25e1
  variant carriers: 94
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.75e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2600
  bin: 6.75e1
  variant carriers: 136
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 5
hgvs: p.Asn53Asn
num of homozygotes: 12584
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

22-17690414-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690414
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690414
    reference: chr 22
allele count: 3
allele frequency: 2.473818751546137e-5
allele num: 121270
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.154C>G
  hgvsp: ENSP00000442482.1:p.Leu52Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.28C>G
  hgvsp: ENSP00000406443.2:p.Leu10Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.154C>G
  hgvsp: ENSP00000392078.1:p.Leu52Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.154C>G
  hgvsp: ENSP00000382731.2:p.Leu52Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.154C>G
  hgvsp: ENSP00000262607.2:p.Leu52Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.154C>G
  hgvsp: ENSP00000382733.1:p.Leu52Val
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10703
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24604
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4324
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10891
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9045
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1960
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7849
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2532
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu52Val
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

22-17690421-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690421
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690421
    reference: chr 22
allele count: 7
allele frequency: 5.772910206505245e-5
allele num: 121256
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.21G>A
  hgvsp: ENST00000449907.2:c.21G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.147G>A
  hgvsp: ENST00000399837.2:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.147G>A
  hgvsp: ENST00000543038.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.147G>A
  hgvsp: ENST00000441548.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.147G>A
  hgvsp: ENST00000262607.3:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.147G>A
  hgvsp: ENST00000399839.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4216
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10803
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32545
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9013
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7770
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg49Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

22-17690423-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690423
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690423
    reference: chr 22
allele count: 10
allele frequency: 8.264189613566494e-5
allele num: 121004
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.145C>T
  hgvsp: ENSP00000382731.2:p.Arg49Trp
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.145C>T
  hgvsp: ENSP00000382733.1:p.Arg49Trp
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.19C>T
  hgvsp: ENSP00000406443.2:p.Arg7Trp
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.145C>T
  hgvsp: ENSP00000392078.1:p.Arg49Trp
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.145C>T
  hgvsp: ENSP00000262607.2:p.Arg49Trp
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.145C>T
  hgvsp: ENSP00000442482.1:p.Arg49Trp
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10805
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32022
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 966
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1451
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2443
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg49Trp
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

22-17690423-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690423
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690424
    reference: chr 22
allele count: 29
allele frequency: 2.396614987934283e-4
allele num: 121004
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.144dupG
  hgvsp: ENSP00000392078.1:p.Arg49AlafsTer13
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.144dupG
  hgvsp: ENSP00000262607.2:p.Arg49AlafsTer13
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.18dupG
  hgvsp: ENSP00000406443.2:p.Arg7AlafsTer13
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.144dupG
  hgvsp: ENSP00000442482.1:p.Arg49AlafsTer13
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.144dupG
  hgvsp: ENSP00000382733.1:p.Arg49AlafsTer13
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.144dupG
  hgvsp: ENSP00000382731.2:p.Arg49AlafsTer13
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 10795
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 24833
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10805
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2443
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2753
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7600
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg49AlafsTer13
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD

22-17690423-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690423
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690422
    reference: chr 22
allele count: 6
allele frequency: 4.958513768139896e-5
allele num: 121004
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.18delG
  hgvsp: ENSP00000406443.2:p.Arg7GlyfsTer4
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.144delG
  hgvsp: ENSP00000262607.2:p.Arg49GlyfsTer4
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.144delG
  hgvsp: ENSP00000442482.1:p.Arg49GlyfsTer4
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.144delG
  hgvsp: ENSP00000382733.1:p.Arg49GlyfsTer4
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.144delG
  hgvsp: ENSP00000382731.2:p.Arg49GlyfsTer4
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.144delG
  hgvsp: ENSP00000392078.1:p.Arg49GlyfsTer4
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10805
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2753
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7600
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1882
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1451
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg49GlyfsTer4
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: GC
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/22-17690425-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690425
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690425
    reference: chr 22
allele count: 6
allele frequency: 4.948453608247422e-5
allele num: 121250
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.143G>T
  hgvsp: ENSP00000382733.1:p.Gly48Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.143G>T
  hgvsp: ENSP00000392078.1:p.Gly48Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.17G>T
  hgvsp: ENSP00000406443.2:p.Gly6Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.143G>T
  hgvsp: ENSP00000262607.2:p.Gly48Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.143G>T
  hgvsp: ENSP00000442482.1:p.Gly48Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.143G>T
  hgvsp: ENSP00000382731.2:p.Gly48Val
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10764
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4159
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1977
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10837
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25249
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2855
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1456
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33053
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2475
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly48Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ

22-17690425-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690425
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690425
    reference: chr 22
allele count: 4
allele frequency: 3.298969072164949e-5
allele num: 121250
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.143G>A
  hgvsp: ENSP00000382733.1:p.Gly48Glu
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.143G>A
  hgvsp: ENSP00000382731.2:p.Gly48Glu
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.143G>A
  hgvsp: ENSP00000262607.2:p.Gly48Glu
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.17G>A
  hgvsp: ENSP00000406443.2:p.Gly6Glu
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.143G>A
  hgvsp: ENSP00000442482.1:p.Gly48Glu
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.143G>A
  hgvsp: ENSP00000392078.1:p.Gly48Glu
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25249
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10764
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1977
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10837
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2807
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly48Glu
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS

http://identifiers.org/exac.variant/22-17690427-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690427
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690427
    reference: chr 22
allele count: 1
allele frequency: 8.244838730954422e-6
allele num: 121288
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.141G>T
  hgvsp: ENST00000262607.3:c.141G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.141G>T
  hgvsp: ENST00000441548.1:c.141G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.141G>T
  hgvsp: ENST00000399839.1:c.141G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.141G>T
  hgvsp: ENST00000399837.2:c.141G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.15G>T
  hgvsp: ENST00000449907.2:c.15G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.141G>T
  hgvsp: ENST00000543038.1:c.141G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25348
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1458
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7856
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1911
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2487
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly47Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/22-17690428-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690428
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690428
    reference: chr 22
allele count: 8
allele frequency: 6.595870984763538e-5
allele num: 121288
alternate allele: A
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.140G>T
  hgvsp: ENSP00000382731.2:p.Gly47Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.140G>T
  hgvsp: ENSP00000262607.2:p.Gly47Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.14G>T
  hgvsp: ENSP00000406443.2:p.Gly5Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.140G>T
  hgvsp: ENSP00000392078.1:p.Gly47Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.140G>T
  hgvsp: ENSP00000442482.1:p.Gly47Val
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.140G>T
  hgvsp: ENSP00000382733.1:p.Gly47Val
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4128
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10825
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7855
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1455
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2835
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly47Val
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

22-17690428-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690428
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690428
    reference: chr 22
allele count: 2
allele frequency: 1.648967746190884e-5
allele num: 121288
alternate allele: G
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.140G>C
  hgvsp: ENSP00000392078.1:p.Gly47Ala
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.140G>C
  hgvsp: ENSP00000382733.1:p.Gly47Ala
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.140G>C
  hgvsp: ENSP00000262607.2:p.Gly47Ala
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.14G>C
  hgvsp: ENSP00000406443.2:p.Gly5Ala
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.140G>C
  hgvsp: ENSP00000442482.1:p.Gly47Ala
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.140G>C
  hgvsp: ENSP00000382731.2:p.Gly47Ala
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10825
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10801
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4128
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8840
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 978
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2835
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2486
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly47Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/22-17690429-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690429
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690429
    reference: chr 22
allele count: 1
allele frequency: 8.247286642694553e-6
allele num: 121252
alternate allele: A
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.13G>T
  hgvsp: ENSP00000406443.2:p.Gly5Trp
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.139G>T
  hgvsp: ENSP00000442482.1:p.Gly47Trp
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.139G>T
  hgvsp: ENSP00000382733.1:p.Gly47Trp
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.139G>T
  hgvsp: ENSP00000382731.2:p.Gly47Trp
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.139G>T
  hgvsp: ENSP00000262607.2:p.Gly47Trp
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.139G>T
  hgvsp: ENSP00000392078.1:p.Gly47Trp
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25369
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4125
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10811
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33201
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8823
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1452
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly47Trp
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

22-17690429-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690429
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690429
    reference: chr 22
allele count: 9
allele frequency: 7.422557978425098e-5
allele num: 121252
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.139G>A
  hgvsp: ENSP00000392078.1:p.Gly47Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.139G>A
  hgvsp: ENSP00000382731.2:p.Gly47Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.139G>A
  hgvsp: ENSP00000262607.2:p.Gly47Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.139G>A
  hgvsp: ENSP00000382733.1:p.Gly47Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.139G>A
  hgvsp: ENSP00000442482.1:p.Gly47Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.13G>A
  hgvsp: ENSP00000406443.2:p.Gly5Arg
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10811
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25369
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4125
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1452
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1911
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly47Arg
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

22-17690429-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690429
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690429
    reference: chr 22
allele count: 2
allele frequency: 1.649457328538911e-5
allele num: 121252
alternate allele: G
annotation: Annotation
  canonical: true
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.139G>C
  hgvsp: ENSP00000382733.1:p.Gly47Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.139G>C
  hgvsp: ENSP00000392078.1:p.Gly47Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.139G>C
  hgvsp: ENSP00000382731.2:p.Gly47Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.139G>C
  hgvsp: ENSP00000262607.2:p.Gly47Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.13G>C
  hgvsp: ENSP00000406443.2:p.Gly5Arg
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.139G>C
  hgvsp: ENSP00000442482.1:p.Gly47Arg
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10811
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25369
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4125
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33201
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2482
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly47Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/22-17690430-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17690430
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 17690430
    reference: chr 22
allele count: 1
allele frequency: 8.25082508250825e-6
allele num: 121200
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382731
  ensembl transcript: ENST00000399837
  gene symbol: CECR1
  hgvsc: ENST00000399837.2:c.138G>T
  hgvsp: ENST00000399837.2:c.138G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000262607
  ensembl transcript: ENST00000262607
  gene symbol: CECR1
  hgvsc: ENST00000262607.3:c.138G>T
  hgvsp: ENST00000262607.3:c.138G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000392078
  ensembl transcript: ENST00000441548
  gene symbol: CECR1
  hgvsc: ENST00000441548.1:c.138G>T
  hgvsp: ENST00000441548.1:c.138G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000406443
  ensembl transcript: ENST00000449907
  gene symbol: CECR1
  hgvsc: ENST00000449907.2:c.12G>T
  hgvsp: ENST00000449907.2:c.12G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000382733
  ensembl transcript: ENST00000399839
  gene symbol: CECR1
  hgvsc: ENST00000399839.1:c.138G>T
  hgvsp: ENST00000399839.1:c.138G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000093072
  ensembl protein: ENSP00000442482
  ensembl transcript: ENST00000543038
  gene symbol: CECR1
  hgvsc: ENST00000543038.1:c.138G>T
  hgvsp: ENST00000543038.1:c.138G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2112
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9079
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23893
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu46Leu
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 948
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2818
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3610
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 40309
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2457
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.409e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.724e0

MQRankSum
type: SiteQuality
SIO_000300: 3.22e0

VQSLOD
type: SiteQuality
SIO_000300: -2.494e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 1.536e0

QD
type: SiteQuality
SIO_000300: 1.192e1

DP
type: SiteQuality
SIO_000300: 1.660851e6

MQ
type: SiteQuality
SIO_000300: 5.984e1

GenotypeQuality
all individuals: 7874
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2805
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3613
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 946
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2453
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66676
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 8.637070305752289e-4
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.660069e6

MQ
type: SiteQuality
SIO_000300: 5.932e1

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.5e-3

QD
type: SiteQuality
SIO_000300: 1.14e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.593e0

MQRankSum
type: SiteQuality
SIO_000300: 3.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.71e-1

FS
type: SiteQuality
SIO_000300: 6.08e-1

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2802
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40291
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3615
bin: 9.75e1
variant carriers: 19

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.249752527222006e-4
allele num: 66674
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.89e0

DP
type: SiteQuality
SIO_000300: 1.659973e6

MQRankSum
type: SiteQuality
SIO_000300: 3.24e-1

FS
type: SiteQuality
SIO_000300: 1.334e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.79e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

QD
type: SiteQuality
SIO_000300: 1.333e1

VQSLOD
type: SiteQuality
SIO_000300: 4.21e0

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7870
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2801
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1747
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.7e0

VQSLOD
type: SiteQuality
SIO_000300: 1.06e-1

DP
type: SiteQuality
SIO_000300: 1.658638e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.414e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.26e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.41e-1

FS
type: SiteQuality
SIO_000300: 9.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.59e-1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2453
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40287
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1746
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500105007350515e-5
allele num: 66662
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.541e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

QD
type: SiteQuality
SIO_000300: 1.355e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.09e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

DP
type: SiteQuality
SIO_000300: 1.658145e6

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2454
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3595
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7871
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.427e1

VQSLOD
type: SiteQuality
SIO_000300: -2.942e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.85e0

FS
type: SiteQuality
SIO_000300: 2.199e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.29e-2

MQ
type: SiteQuality
SIO_000300: 5.971e1

MQRankSum
type: SiteQuality
SIO_000300: -1.467e0

DP
type: SiteQuality
SIO_000300: 1.657808e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3594
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 40241
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2799
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7862
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.34e-1

QD
type: SiteQuality
SIO_000300: 1.342e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

DP
type: SiteQuality
SIO_000300: 1.657288e6

FS
type: SiteQuality
SIO_000300: 2.069e0

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.45e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.34e-1

MQ
type: SiteQuality
SIO_000300: 6.051e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.91e0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2797
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2450
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7854
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.101281269066504e-5
allele num: 16390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.891e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.106e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.23e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.41e0

VQSLOD
type: SiteQuality
SIO_000300: -2.398e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.21e-1

DP
type: SiteQuality
SIO_000300: 1.657107e6

QD
type: SiteQuality
SIO_000300: 2.079e1

MQRankSum
type: SiteQuality
SIO_000300: 5.05e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1744
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2796
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3597
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7848
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66640
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.442598925256473e-4
allele num: 16376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.265e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.476e0

VQSLOD
type: SiteQuality
SIO_000300: 2.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.43e-1

FS
type: SiteQuality
SIO_000300: 2.411e0

DP
type: SiteQuality
SIO_000300: 1.656832e6

MQ
type: SiteQuality
SIO_000300: 5.919e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.62e-1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 945
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2773
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39575
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3591
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.2266500622665e-5
allele num: 16060
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.262e1

VQSLOD
type: SiteQuality
SIO_000300: 3.67e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.84e-1

FS
type: SiteQuality
SIO_000300: 1.179e0

DP
type: SiteQuality
SIO_000300: 1.647926e6

MQRankSum
type: SiteQuality
SIO_000300: -1.129e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.541e0

GenotypeQuality
all individuals: 3590
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 71
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39321
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1737
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2769
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505162708088744e-5
allele num: 66438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15936
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.267e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.49e-1

DP
type: SiteQuality
SIO_000300: 1.644451e6

QD
type: SiteQuality
SIO_000300: 1.737e1

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2767
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39367
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 945
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3589
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1735
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15940
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66436
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.644456e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.429999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.27e-1

QD
type: SiteQuality
SIO_000300: 1.299e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.07e0

FS
type: SiteQuality
SIO_000300: 5.362e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.032e1

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2765
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1735
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7735
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39294
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2423
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.292474200855777e-5
allele num: 15892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.321e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.229e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.64352e6

MQRankSum
type: SiteQuality
SIO_000300: -1.424e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -6.29e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.100000000000001e-1

GenotypeQuality
all individuals: 122
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2753
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7651
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3587
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1733
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66316
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15540
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.073e0

VQSLOD
type: SiteQuality
SIO_000300: 9.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.79e-1

DP
type: SiteQuality
SIO_000300: 1.634447e6

FS
type: SiteQuality
SIO_000300: 4.129e0

MQRankSum
type: SiteQuality
SIO_000300: -2.87e-1

QD
type: SiteQuality
SIO_000300: 1.251e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.269e0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1734
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3587
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 708
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7640
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2751
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66316
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.214e0

QD
type: SiteQuality
SIO_000300: 1.09e1

DP
type: SiteQuality
SIO_000300: 1.63432e6

FS
type: SiteQuality
SIO_000300: 1.455e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

MQ
type: SiteQuality
SIO_000300: 5.281e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.343e0

MQRankSum
type: SiteQuality
SIO_000300: 5.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2721
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3582
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 945
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2982
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14652
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.673026886383348e-5
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65904
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.18e-1

QD
type: SiteQuality
SIO_000300: 1.558e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.14e0

MQRankSum
type: SiteQuality
SIO_000300: -7.05e-1

FS
type: SiteQuality
SIO_000300: 3.525e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.05e-1

DP
type: SiteQuality
SIO_000300: 1.606603e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 113
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1691
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2664
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7126
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2265
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 393
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 5.003573981415296e-4
allele num: 13990
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65616
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 3.973e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.564e0

DP
type: SiteQuality
SIO_000300: 1.580681e6

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.71e-1

QD
type: SiteQuality
SIO_000300: 1.309e1

GenotypeQuality
all individuals: 277
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 376
bin: 5.25e1
variant carriers: 11

GenotypeQuality
all individuals: 659
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 5939
bin: 6.75e1
variant carriers: 11

GenotypeQuality
all individuals: 608
bin: 8.75e1
variant carriers: 16

GenotypeQuality
all individuals: 7589
bin: 9.75e1
variant carriers: 4685

GenotypeQuality
all individuals: 4965
bin: 2.25e1
variant carriers: 2

South Asian
type: Population
allele count: 202
allele frequency: 1.56832298136646e-2
allele num: 12880
num of homozygotes: 9

East Asian
type: Population
allele count: 2
allele frequency: 2.337540906965872e-4
allele num: 8556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 313
allele frequency: 4.748179611650485e-2
allele num: 6592
num of homozygotes: 6

Other
type: Population
allele count: 38
allele frequency: 4.491725768321513e-2
allele num: 846
num of homozygotes: 1

African
type: Population
allele count: 339
allele frequency: 3.295741784950418e-2
allele num: 10286
num of homozygotes: 5

European (Non-Finnish)
type: Population
allele count: 3706
allele frequency: 5.708916137778051e-2
allele num: 64916
num of homozygotes: 99

Latino
type: Population
allele count: 276
allele frequency: 2.41554349728689e-2
allele num: 11426
num of homozygotes: 4

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.82e0

MQRankSum
type: SiteQuality
SIO_000300: 5.9e-2

QD
type: SiteQuality
SIO_000300: 1.6e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

DP
type: SiteQuality
SIO_000300: 1.552611e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e-2

GenotypeQuality
all individuals: 2602
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5363
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 957
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6518
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1585
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2115
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.566170712607674e-4
allele num: 12770
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.37e0

QD
type: SiteQuality
SIO_000300: 1.481e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.3e-2

DP
type: SiteQuality
SIO_000300: 1.502278e6

GenotypeQuality
all individuals: 2096
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3345
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 641
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1581
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5423
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 957
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.748906386701662e-5
allele num: 11430
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.503035964502569e-4
allele num: 8564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64846
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12688
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.98e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.37e-1

FS
type: SiteQuality
SIO_000300: 9.025e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.742e0

DP
type: SiteQuality
SIO_000300: 1.494875e6

QD
type: SiteQuality
SIO_000300: 1.322e1

GenotypeQuality
all individuals: 641
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2491
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2129
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3345
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 335
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 1.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.542115165160534e-5
allele num: 64846
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12688
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

DP
type: SiteQuality
SIO_000300: 1.494875e6

VQSLOD
type: SiteQuality
SIO_000300: 7.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.742e0

FS
type: SiteQuality
SIO_000300: 9.025e0

MQRankSum
type: SiteQuality
SIO_000300: -3.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.37e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.322e1

GenotypeQuality
all individuals: 1014
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 695
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6264
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2473
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25629
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12542
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.506311360448808e-4
allele num: 8556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64746
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.296e1

VQSLOD
type: SiteQuality
SIO_000300: -1.53e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

DP
type: SiteQuality
SIO_000300: 1.479973e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.16e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.416e0

GenotypeQuality
all individuals: 3401
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2042
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6115
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2446
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 952
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12294
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.54933068914229e-5
allele num: 64544
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.761e0

DP
type: SiteQuality
SIO_000300: 1.457681e6

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -9.431e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.76e0

QD
type: SiteQuality
SIO_000300: 1.401e1

GenotypeQuality
all individuals: 4287
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5043
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1552
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2238
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3331
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 955
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11994
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.554726368159204e-5
allele num: 64320
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.41e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.17e-1

QD
type: SiteQuality
SIO_000300: 1.744e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

DP
type: SiteQuality
SIO_000300: 1.438364e6

MQRankSum
type: SiteQuality
SIO_000300: 1.68e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.61e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.704e0

GenotypeQuality
all individuals: 2727
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2468
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1914
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3333
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 944
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2375
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2285
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11298
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11718
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10110
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.563330519338399e-5
allele num: 63966
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.13e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.84e-1

QD
type: SiteQuality
SIO_000300: 1.06e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.620000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.53e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.423299e6

GenotypeQuality
all individuals: 2845
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2446
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3910
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3506
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3717
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10762
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64346
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10136
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.163061177017911e-4
allele num: 8598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.297e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

DP
type: SiteQuality
SIO_000300: 2.003017e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

MQRankSum
type: SiteQuality
SIO_000300: -8.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.453e0

VQSLOD
type: SiteQuality
SIO_000300: 2.26e-1

GenotypeQuality
all individuals: 427
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2913
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19700
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 544
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5026
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3517
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.850275807722617e-5
allele num: 10152
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10882
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.79e-1

DP
type: SiteQuality
SIO_000300: 2.012421e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.37e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.127e1

VQSLOD
type: SiteQuality
SIO_000300: 3.47e0

GenotypeQuality
all individuals: 760
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2515
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19751
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3173
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5196
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.628343978524484e-5
allele num: 64818
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.276e1

VQSLOD
type: SiteQuality
SIO_000300: 8.4e-1

FS
type: SiteQuality
SIO_000300: 5.18e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

DP
type: SiteQuality
SIO_000300: 2.036054e6

MQ
type: SiteQuality
SIO_000300: 5.972e1

GenotypeQuality
all individuals: 3823
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2982
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3559
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4008
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19754
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.677542519958348e-5
allele num: 11524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65042
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12382
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.811e0

VQSLOD
type: SiteQuality
SIO_000300: -1.896e0

QD
type: SiteQuality
SIO_000300: 1.21e1

MQ
type: SiteQuality
SIO_000300: 5.786e1

MQRankSum
type: SiteQuality
SIO_000300: 1.57e0

DP
type: SiteQuality
SIO_000300: 2.04664e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

GenotypeQuality
all individuals: 151
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3560
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19756
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2755
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2521
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12776
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65148
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.316423442205235e-4
allele num: 8634
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.17e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.43e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.899e0

DP
type: SiteQuality
SIO_000300: 2.051941e6

MQRankSum
type: SiteQuality
SIO_000300: -2.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.95e-1

GenotypeQuality
all individuals: 999
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2555
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3881
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3127
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3589
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66072
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.676795045480937e-5
allele num: 10334
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.45e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.78e-1

FS
type: SiteQuality
SIO_000300: 3.467e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.511e0

QD
type: SiteQuality
SIO_000300: 1.195e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.211e-1

DP
type: SiteQuality
SIO_000300: 2.093904e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2561
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19764
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4166
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 839
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3135
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5683
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3592
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447535e-5
allele num: 66140
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-1

QD
type: SiteQuality
SIO_000300: 8.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.09739e6

MQ
type: SiteQuality
SIO_000300: 5.896e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.839e0

VQSLOD
type: SiteQuality
SIO_000300: -2.112e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e0

GenotypeQuality
all individuals: 257
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5829
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2600
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3194
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16904
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4007
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3623
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503668952243474e-5
allele num: 66504
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e0

FS
type: SiteQuality
SIO_000300: 3.087e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.64e-1

QD
type: SiteQuality
SIO_000300: 1.196e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.953e1

VQSLOD
type: SiteQuality
SIO_000300: 1.75e-1

DP
type: SiteQuality
SIO_000300: 2.112542e6

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2606
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3628
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17034
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502403846153846e-5
allele num: 66560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.712e1

MQRankSum
type: SiteQuality
SIO_000300: -4.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.379e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.32e0

DP
type: SiteQuality
SIO_000300: 2.115032e6

VQSLOD
type: SiteQuality
SIO_000300: 3.7e-2

FS
type: SiteQuality
SIO_000300: 4.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4286
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2613
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3225
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17041
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19801
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.13e0

DP
type: SiteQuality
SIO_000300: 2.117656e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.612e0

QD
type: SiteQuality
SIO_000300: 1.269e1

MQ
type: SiteQuality
SIO_000300: 5.935e1

GenotypeQuality
all individuals: 5892
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19804
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2619
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4290
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500285054160291e-5
allele num: 66654
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

MQ
type: SiteQuality
SIO_000300: 5.944e1

MQRankSum
type: SiteQuality
SIO_000300: 4.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.54e-1

FS
type: SiteQuality
SIO_000300: 7.326e0

DP
type: SiteQuality
SIO_000300: 2.118412e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.266e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.7e-1

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3230
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4295
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19814
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5892
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4035
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66664
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e0

MQ
type: SiteQuality
SIO_000300: 5.634e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.568e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.892e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.119022e6

QD
type: SiteQuality
SIO_000300: 1.205e1

GenotypeQuality
all individuals: 3641
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3230
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4293
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4037
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17069
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.942e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 3.707e0

QD
type: SiteQuality
SIO_000300: 1.106e1

VQSLOD
type: SiteQuality
SIO_000300: 5.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.52e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e0

DP
type: SiteQuality
SIO_000300: 2.119425e6

MQRankSum
type: SiteQuality
SIO_000300: -3.15e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3230
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17073
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19822
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2630
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3644
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.119751e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-2

QD
type: SiteQuality
SIO_000300: 1.325e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.37e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.75e-1

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3230
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19828
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3644
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4298
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17083
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2626
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998770504093322e-5
allele num: 66694
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 7
allele frequency: 7.72626931567329e-3
allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.95e-2

DP
type: SiteQuality
SIO_000300: 2.120391e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e-2

QD
type: SiteQuality
SIO_000300: 1.315e1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4038
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19827
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3231
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5899
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3644
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.816860465116279e-4
allele num: 16512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.51e-1

FS
type: SiteQuality
SIO_000300: 1.567e0

DP
type: SiteQuality
SIO_000300: 2.120298e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.545e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.179999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.49e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.77e-1

QD
type: SiteQuality
SIO_000300: 1.2e1

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4039
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19826
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3230
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17087
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.962e0

QD
type: SiteQuality
SIO_000300: 1.268e1

MQ
type: SiteQuality
SIO_000300: 5.941e1

VQSLOD
type: SiteQuality
SIO_000300: -1.729e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.72e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.399e0

MQRankSum
type: SiteQuality
SIO_000300: 1.92e0

DP
type: SiteQuality
SIO_000300: 2.120387e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.834e0

GenotypeQuality
all individuals: 17073
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2626
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

QD
type: SiteQuality
SIO_000300: 1.608e1

MQRankSum
type: SiteQuality
SIO_000300: -2.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.47e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.978e1

DP
type: SiteQuality
SIO_000300: 2.120893e6

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4302
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17075
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.205e0

MQ
type: SiteQuality
SIO_000300: 5.869e1

VQSLOD
type: SiteQuality
SIO_000300: -2.285e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.77e-1

QD
type: SiteQuality
SIO_000300: 1.239e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.134e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.594e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.34e0

DP
type: SiteQuality
SIO_000300: 2.120969e6

GenotypeQuality
all individuals: 17
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3233
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3647
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4045
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5893
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

African
type: Population
allele count: 18
allele frequency: 1.730103806228374e-3
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.56e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.340000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.88e-1

DP
type: SiteQuality
SIO_000300: 2.121518e6

QD
type: SiteQuality
SIO_000300: 1.249e1

GenotypeQuality
all individuals: 17053
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3231
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2628
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3648
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5897
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.108e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.068e0

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.93e-1

DP
type: SiteQuality
SIO_000300: 2.121143e6

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4297
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4047
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5899
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19832
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.407e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.27e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.84e-1

DP
type: SiteQuality
SIO_000300: 2.121131e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.48e-1

FS
type: SiteQuality
SIO_000300: 3.283e0

MQ
type: SiteQuality
SIO_000300: 5.915e1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19832
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2629
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4297
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5899
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17055
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.283e0

DP
type: SiteQuality
SIO_000300: 2.121131e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.56e-1

QD
type: SiteQuality
SIO_000300: 1.407e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.48e-1

MQ
type: SiteQuality
SIO_000300: 5.915e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.27e-1

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19831
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4049
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4295
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 5.655e0

DP
type: SiteQuality
SIO_000300: 2.121096e6

MQ
type: SiteQuality
SIO_000300: 5.933e1

MQRankSum
type: SiteQuality
SIO_000300: -2.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.21e-1

QD
type: SiteQuality
SIO_000300: 1.154e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

GenotypeQuality
all individuals: 2626
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19829
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3648
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4294
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.37e-1

QD
type: SiteQuality
SIO_000300: 1.325e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.248e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e0

MQRankSum
type: SiteQuality
SIO_000300: 6.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.478e0

DP
type: SiteQuality
SIO_000300: 2.121312e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 9.15e-1

GenotypeQuality
all individuals: 2625
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3220
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16966
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5888
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4047
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.816860465116279e-4
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.09e-1

MQ
type: SiteQuality
SIO_000300: 5.89e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.59e-1

QD
type: SiteQuality
SIO_000300: 1.471e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-1

DP
type: SiteQuality
SIO_000300: 2.12126e6

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2629
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4295
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19840
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3212
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.16e0

DP
type: SiteQuality
SIO_000300: 2.1213e6

FS
type: SiteQuality
SIO_000300: 4.561e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.3e-2

QD
type: SiteQuality
SIO_000300: 1.689e1

MQRankSum
type: SiteQuality
SIO_000300: 4.9e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.412e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.32e0

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4044
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19841
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 3210
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3646
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5871
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.493555542233679e-5
allele num: 66724
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.614e0

QD
type: SiteQuality
SIO_000300: 1.502e1

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.58e-1

DP
type: SiteQuality
SIO_000300: 2.121348e6

FS
type: SiteQuality
SIO_000300: 4.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-2

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4294
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19836
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16870
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.966e1

FS
type: SiteQuality
SIO_000300: 1.113e0

MQRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.120786e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.276e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.92e-1

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5798
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2626
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4284
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3636
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19867
bin: 9.75e1
variant carriers: 56

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 55
allele frequency: 8.243652387661501e-4
allele num: 66718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.99e-1

FS
type: SiteQuality
SIO_000300: 5.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

DP
type: SiteQuality
SIO_000300: 2.123398e6

QD
type: SiteQuality
SIO_000300: 2.832e1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19862
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 38
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2626
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3212
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3644
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16870
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.634161114476075e-4
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.0e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 8.29e-1

QD
type: SiteQuality
SIO_000300: 1.29e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.47e-1

FS
type: SiteQuality
SIO_000300: 6.091e0

DP
type: SiteQuality
SIO_000300: 2.122694e6

GenotypeQuality
all individuals: 53
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5779
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3195
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4051
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3649
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2630
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16664
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.9e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.42e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.244e0

DP
type: SiteQuality
SIO_000300: 2.12203e6

FS
type: SiteQuality
SIO_000300: 7.42e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

QD
type: SiteQuality
SIO_000300: 2.965e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.33e-1

GenotypeQuality
all individuals: 4067
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4274
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3192
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5760
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19879
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 110
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2629
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.094e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.6e-1

FS
type: SiteQuality
SIO_000300: 1.0538e1

MQRankSum
type: SiteQuality
SIO_000300: 5.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.121375e6

QD
type: SiteQuality
SIO_000300: 1.58e1

GenotypeQuality
all individuals: 744
bin: 8.75e1
variant carriers: 183

GenotypeQuality
all individuals: 75
bin: 3.25e1
variant carriers: 16

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 8

GenotypeQuality
all individuals: 117
bin: 5.25e1
variant carriers: 46

GenotypeQuality
all individuals: 1100
bin: 8.25e1
variant carriers: 184

GenotypeQuality
all individuals: 9766
bin: 6.25e1
variant carriers: 84

GenotypeQuality
all individuals: 42212
bin: 9.75e1
variant carriers: 38754

GenotypeQuality
all individuals: 114
bin: 4.75e1
variant carriers: 33

GenotypeQuality
all individuals: 1097
bin: 9.25e1
variant carriers: 292

African
type: Population
allele count: 3138
allele frequency: 3.020211742059673e-1
allele num: 10390
num of homozygotes: 492

Latino
type: Population
allele count: 3245
allele frequency: 2.810984060984061e-1
allele num: 11544
num of homozygotes: 505

East Asian
type: Population
allele count: 578
allele frequency: 6.688266604952557e-2
allele num: 8642
num of homozygotes: 13

Other
type: Population
allele count: 419
allele frequency: 4.624724061810154e-1
allele num: 906
num of homozygotes: 105

European (Non-Finnish)
type: Population
allele count: 35184
allele frequency: 5.280028813254097e-1
allele num: 66636
num of homozygotes: 9241

European (Finnish)
type: Population
allele count: 3068
allele frequency: 4.645669291338583e-1
allele num: 6604
num of homozygotes: 716

South Asian
type: Population
allele count: 6994
allele frequency: 4.236733704870366e-1
allele num: 16508
num of homozygotes: 1512

DP
type: SiteQuality
SIO_000300: 3.215269e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.38e-2

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 5.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.607e0

VQSLOD
type: SiteQuality
SIO_000300: 5.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.42e-1

QD
type: SiteQuality
SIO_000300: 1.895e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.64e-1

GenotypeQuality
all individuals: 372
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1513
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2882
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1011
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32074
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.500990217847926e-5
allele num: 66652
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.669e1

FS
type: SiteQuality
SIO_000300: 3.827e0

MQRankSum
type: SiteQuality
SIO_000300: -2.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.922e1

DP
type: SiteQuality
SIO_000300: 2.015737e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.354e0

VQSLOD
type: SiteQuality
SIO_000300: -1.605e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.61e-1

GenotypeQuality
all individuals: 2500
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1492
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1928
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2818
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.05032560093629e-4
allele num: 66646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.98e0

QD
type: SiteQuality
SIO_000300: 1.297e1

VQSLOD
type: SiteQuality
SIO_000300: 1.4e0

FS
type: SiteQuality
SIO_000300: 6.113e0

DP
type: SiteQuality
SIO_000300: 2.011051e6

MQ
type: SiteQuality
SIO_000300: 5.945e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e-1

GenotypeQuality
all individuals: 504
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2753
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7600
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1882
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8830
bin: 9.75e1
variant carriers: 10

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.01630418433956e-5
allele num: 66486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.464403256539061e-4
allele num: 11546
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 2.010761e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.5e-2

FS
type: SiteQuality
SIO_000300: 7.52e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

VQSLOD
type: SiteQuality
SIO_000300: 8.080000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.32e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.18e-1

GenotypeQuality
all individuals: 286
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1882
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1451
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 504
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 434
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 32022
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8830
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 966
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 5
allele frequency: 4.330504070673827e-4
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.875968992248062e-4
allele num: 10320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 3.00815209216978e-4
allele num: 66486
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.080000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.32e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.37e-1

FS
type: SiteQuality
SIO_000300: 7.52e-1

DP
type: SiteQuality
SIO_000300: 2.010761e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.5e-2

QD
type: SiteQuality
SIO_000300: 1.34e0

GenotypeQuality
all individuals: 966
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32022
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8830
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 504
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2443
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.689922480620155e-5
allele num: 10320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.52038023042445e-5
allele num: 66486
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.080000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.010761e6

MQRankSum
type: SiteQuality
SIO_000300: 3.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 7.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.18e-1

QD
type: SiteQuality
SIO_000300: 1.34e0

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2807
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8838
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 7825
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1905
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.501650363079878e-5
allele num: 66652
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.999999999999999e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.99e-1

FS
type: SiteQuality
SIO_000300: 9.31e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.469e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.324e1

DP
type: SiteQuality
SIO_000300: 2.004771e6

MQ
type: SiteQuality
SIO_000300: 5.942e1

GenotypeQuality
all individuals: 7825
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1456
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33053
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1905
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8838
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 218
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2475
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.862495171881035e-4
allele num: 10356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.004771e6

MQ
type: SiteQuality
SIO_000300: 5.942e1

MQRankSum
type: SiteQuality
SIO_000300: -8.999999999999999e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-2

QD
type: SiteQuality
SIO_000300: 1.324e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.469e0

VQSLOD
type: SiteQuality
SIO_000300: 4.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 9.31e0

GenotypeQuality
all individuals: 977
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2829
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8836
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 163
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33291
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499880009599232e-5
allele num: 66672
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.038e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.643e0

QD
type: SiteQuality
SIO_000300: 1.259e1

VQSLOD
type: SiteQuality
SIO_000300: 2.49e0

DP
type: SiteQuality
SIO_000300: 2.003942e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.052e0

MQRankSum
type: SiteQuality
SIO_000300: 4.46e-1

GenotypeQuality
all individuals: 113
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33319
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1914
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8840
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 2486
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.028100775193798e-4
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.499505054444011e-5
allele num: 66674
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

DP
type: SiteQuality
SIO_000300: 2.004113e6

MQ
type: SiteQuality
SIO_000300: 5.943e1

FS
type: SiteQuality
SIO_000300: 1.75e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.164e0

QD
type: SiteQuality
SIO_000300: 1.172e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1455
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7855
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1914
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33319
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999670036296008e-5
allele num: 66674
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.75e0

MQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

DP
type: SiteQuality
SIO_000300: 2.004113e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.164e0

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-2

MQ
type: SiteQuality
SIO_000300: 5.943e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.172e1

GenotypeQuality
all individuals: 114
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2820
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7844
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2482
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1911
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66658
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.948e1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

QD
type: SiteQuality
SIO_000300: 1.385e1

DP
type: SiteQuality
SIO_000300: 2.003861e6

VQSLOD
type: SiteQuality
SIO_000300: 2.97e0

FS
type: SiteQuality
SIO_000300: 1.115e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.521e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

GenotypeQuality
all individuals: 198
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8823
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2820
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2482
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7844
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33201
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.450581395348837e-4
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66658
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.003861e6

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.97e0

FS
type: SiteQuality
SIO_000300: 1.115e0

QD
type: SiteQuality
SIO_000300: 1.385e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.521e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.948e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e-1

GenotypeQuality
all individuals: 7844
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2820
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1452
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1911
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8823
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 176
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66658
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.115e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.97e0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.521e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

QD
type: SiteQuality
SIO_000300: 1.385e1

DP
type: SiteQuality
SIO_000300: 2.003861e6