19-7605566-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605566
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605566
    reference: chr 19
allele count: 11614
allele frequency: 9.5667215815486e-2
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.648C>T
  hgvsp: ENST00000221249.6:c.648C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.765C>T
  hgvsp: ENST00000600737.1:c.765C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.648C>T
  hgvsp: ENST00000545201.2:c.648C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000032444
  ensembl transcript: ENST00000598462
  gene symbol: PNPLA6
  hgvsc: ENST00000598462.1:n.556C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.287C>T
  hgvsp: ENST00000595264.1:c.287C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.648C>T
  hgvsp: ENST00000450331.3:c.648C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.792C>T
  hgvsp: ENST00000414982.3:c.792C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  clinical significance: likely_benign
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.232C>T
  hgvsp: ENST00000594551.1:c.232C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 6.75e1
  variant carriers: 121
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5939
  bin: 4.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 7.75e1
  variant carriers: 183
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4759
  bin: 5.75e1
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 7.25e1
  variant carriers: 150
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4007
  bin: 3.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 4963
  bin: 3.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 6069
  bin: 4.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 8.25e1
  variant carriers: 202
genotype depth: GenotypeDepth
  all individuals: 11668
  bin: 9.75e1
  variant carriers: 9163
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 9.25e1
  variant carriers: 316
genotype depth: GenotypeDepth
  all individuals: 5639
  bin: 5.25e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 8.75e1
  variant carriers: 257
genotype depth: GenotypeDepth
  all individuals: 3876
  bin: 6.25e1
  variant carriers: 115
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn264Asn
num of homozygotes: 783
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ

19-7605572-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605572
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605572
    reference: chr 19
allele count: 2
allele frequency: 1.647446457990115e-5
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.654T>C
  hgvsp: ENST00000450331.3:c.654T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.798T>C
  hgvsp: ENST00000414982.3:c.798T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.238T>C
  hgvsp: ENST00000594551.1:c.238T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.293T>C
  hgvsp: ENST00000595264.1:c.293T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.654T>C
  hgvsp: ENST00000221249.6:c.654T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000032444
  ensembl transcript: ENST00000598462
  gene symbol: PNPLA6
  hgvsc: ENST00000598462.1:n.562T>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.771T>C
  hgvsp: ENST00000600737.1:c.771T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.654T>C
  hgvsp: ENST00000545201.2:c.654T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6845
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4577
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3587
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5787
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3023
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2435
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1961
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu266Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD

19-7605587-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605587
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605587
    reference: chr 19
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.669T>C
  hgvsp: ENST00000545201.2:c.669T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.253T>C
  hgvsp: ENST00000594551.1:c.253T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000032444
  ensembl transcript: ENST00000598462
  gene symbol: PNPLA6
  hgvsc: ENST00000598462.1:n.577T>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.786T>C
  hgvsp: ENST00000600737.1:c.786T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.813T>C
  hgvsp: ENST00000414982.3:c.813T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.308T>C
  hgvsp: ENST00000595264.1:c.308T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.669T>C
  hgvsp: ENST00000221249.6:c.669T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.669T>C
  hgvsp: ENST00000450331.3:c.669T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4812
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6845
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5786
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3024
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1477
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp271Asp
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

19-7605588-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605588
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605588
    reference: chr 19
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.787G>T
  hgvsp: ENSP00000473211.1:p.Val263Phe
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.670G>T
  hgvsp: ENSP00000394348.2:p.Val224Phe
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.670G>T
  hgvsp: ENSP00000443323.1:p.Val224Phe
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.670G>T
  hgvsp: ENSP00000221249.5:p.Val224Phe
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.254G>T
  hgvsp: ENSP00000470060.1:p.Val86Phe
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.309G>T
  hgvsp: ENSP00000472456.1:p.Val104Phe
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.814G>T
  hgvsp: ENSP00000407509.2:p.Val272Phe
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000032444
  ensembl transcript: ENST00000598462
  gene symbol: PNPLA6
  hgvsc: ENST00000598462.1:n.578G>T
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7002
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4812
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6845
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4575
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3023
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5786
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1959
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val272Phe
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

19-7605596-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605596
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605596
    reference: chr 19
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.317C>G
  hgvsp: ENST00000595264.1:c.317C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.678C>G
  hgvsp: ENST00000221249.6:c.678C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.678C>G
  hgvsp: ENST00000450331.3:c.678C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.262C>G
  hgvsp: ENST00000594551.1:c.262C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.795C>G
  hgvsp: ENST00000600737.1:c.795C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.678C>G
  hgvsp: ENST00000545201.2:c.678C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.822C>G
  hgvsp: ENST00000414982.3:c.822C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6846
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4813
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7000
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4575
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5785
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2794
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3587
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: c.822C>G
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

19-7605599-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605599
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605599
    reference: chr 19
allele count: 13
allele frequency: 1.070840197693575e-4
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.678+3G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.795+3G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.678+3G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.678+3G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.262+3G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.822+3G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.317+3G>A
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6843
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2791
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3587
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5787
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5904
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7000
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3023
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7327
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1953
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1477
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2434
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: c.822+3G>A
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

19-7605607-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605607
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605607
    reference: chr 19
allele count: 3
allele frequency: 2.471210398853358e-5
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.262+11A>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.822+11A>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.317+11A>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.678+11A>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.795+11A>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.678+11A>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.678+11A>G
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3019
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6841
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5904
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4572
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7326
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2166
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2732
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

19-7605619-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605619
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605618
    reference: chr 19
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.678+29delG
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.795+29delG
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.678+29delG
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.262+29delG
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.678+29delG
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.822+29delG
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.317+29delG
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7003
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3019
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6841
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5790
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2732
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2158
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1932
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2430
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: AG
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

19-7605621-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605621
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605621
    reference: chr 19
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.317+25G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.795+25G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.678+25G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.262+25G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.678+25G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.822+25G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.678+25G>T
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5787
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3019
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6841
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4812
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2159
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1474
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP

19-7605624-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605624
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605624
    reference: chr 19
allele count: 2
allele frequency: 1.64766361299677e-5
allele num: 121384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.262+28G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.678+28G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.678+28G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.678+28G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.317+28G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.822+28G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.795+28G>T
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6841
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6997
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5785
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3020
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2428
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

19-7605625-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605625
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605625
    reference: chr 19
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.822+29G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.678+29G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.262+29G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.795+29G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.678+29G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.678+29G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.317+29G>A
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5785
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3020
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4552
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4812
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6996
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6841
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1918
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2739
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

19-7605634-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605634
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605634
    reference: chr 19
allele count: 2
allele frequency: 1.648098094798602e-5
allele num: 121352
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.678+38C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.317+38C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.795+38C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.822+38C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.678+38C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.262+38C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.678+38C>T
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5786
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3020
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6840
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7000
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3586
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2145
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1470
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2728
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2421
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45149
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1882
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

19-7605637-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605637
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605637
    reference: chr 19
allele count: 2912
allele frequency: 2.399986813259268e-2
allele num: 121334
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.262+41G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.795+41G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.317+41G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.678+41G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.822+41G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.678+41G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.678+41G>A
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4875
  bin: 6.25e1
  variant carriers: 335
genotype depth: GenotypeDepth
  all individuals: 3087
  bin: 9.75e1
  variant carriers: 152
genotype depth: GenotypeDepth
  all individuals: 7181
  bin: 4.75e1
  variant carriers: 232
genotype depth: GenotypeDepth
  all individuals: 3710
  bin: 6.75e1
  variant carriers: 301
genotype depth: GenotypeDepth
  all individuals: 4462
  bin: 3.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 6892
  bin: 4.25e1
  variant carriers: 151
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 2.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 8.75e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6732
  bin: 5.25e1
  variant carriers: 289
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2690
  bin: 7.25e1
  variant carriers: 221
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 9.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 5899
  bin: 5.75e1
  variant carriers: 350
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 3.75e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 7.75e1
  variant carriers: 154
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 8.25e1
  variant carriers: 131
genotype quality: GenotypeQuality
  all individuals: 2089
  bin: 7.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1840
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.75e1
  variant carriers: 1
num of homozygotes: 291
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP

19-7605637-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605637
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605637
    reference: chr 19
allele count: 8
allele frequency: 6.59337036609689e-5
allele num: 121334
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.822+41G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.678+41G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.678+41G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.262+41G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.795+41G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.678+41G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.317+41G>T
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6892
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7181
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3087
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4875
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6732
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2690
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3710
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5899
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2089
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2651
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1840
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1797
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

19-7605638-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605638
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605638
    reference: chr 19
allele count: 7
allele frequency: 5.767868031179447e-5
allele num: 121362
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.822+42G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.678+42G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.795+42G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.678+42G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.317+42G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.678+42G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.262+42G>A
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7058
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4507
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5890
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3019
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6801
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5819
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7321
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2438
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1878
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1477
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

19-7605641-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605641
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605641
    reference: chr 19
allele count: 1
allele frequency: 8.241169586787756e-6
allele num: 121342
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.795+45C>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.317+45C>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.678+45C>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.678+45C>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.678+45C>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.262+45C>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.822+45C>G
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6804
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3018
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5810
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4792
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44896
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1871
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1884
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2447
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS

19-7605641-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605641
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605641
    reference: chr 19
allele count: 1
allele frequency: 8.241169586787756e-6
allele num: 121342
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.678+45C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.795+45C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.317+45C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.822+45C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.678+45C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.262+45C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.678+45C>T
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5810
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3018
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5888
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4792
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6804
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2151
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1871
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1463
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-7605642-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605642
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605642
    reference: chr 19
allele count: 8
allele frequency: 6.59326168655634e-5
allele num: 121336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.317+46C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.678+46C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.262+46C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.678+46C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.822+46C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.795+46C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.678+46C>T
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7317
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6806
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4792
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4438
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3018
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5810
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2378
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2795
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2436
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2149
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-7605646-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605646
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605645
    reference: chr 19
allele count: 8
allele frequency: 6.594457358590106e-5
allele num: 121314
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.262+52delA
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.822+52delA
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.678+52delA
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.317+52delA
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.678+52delA
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.795+52delA
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.678+52delA
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4407
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7064
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6806
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7309
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3018
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4789
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5787
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3581
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1870
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
reference allele: CA
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

19-7605647-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605647
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605647
    reference: chr 19
allele count: 2
allele frequency: 1.648532805802836e-5
allele num: 121320
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.678+51A>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.795+51A>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.822+51A>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.317+51A>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.678+51A>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.678+51A>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.262+51A>G
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6809
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7304
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5886
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7061
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4407
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3018
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4788
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2173
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2797
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff

19-7605764-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605764
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605764
    reference: chr 19
allele count: 2
allele frequency: 1.743162445308278e-5
allele num: 114734
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.679-45C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.679-45C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.679-45C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.796-45C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.263-54C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.823-45C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.318-45C>T
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11947
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9379
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2960
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22645
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2572
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1102
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1623
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3671
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

19-7605765-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605765
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605765
    reference: chr 19
allele count: 19
allele frequency: 1.660113586719091e-4
allele num: 114450
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.679-44G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.679-44G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.796-44G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.679-44G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.823-44G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.263-53G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.318-44G>A
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3384
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12007
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9419
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22660
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29756
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2128
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4501
  bin: 9.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 1581
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-7605766-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605766
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605766
    reference: chr 19
allele count: 1
allele frequency: 8.717635777177229e-6
allele num: 114710
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.679-43C>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.679-43C>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.263-52C>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.796-43C>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.823-43C>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.679-43C>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.318-43C>A
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12157
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22810
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9413
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3839
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1007
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 848
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2159
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8735
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1926
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

19-7605774-G-GCCCTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605774
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605779
    reference: chr 19
allele count: 1
allele frequency: 8.738050715646353e-6
allele num: 114442
alternate allele: GCCCTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.679-34_679-30dupCCCTT
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.263-43_263-39dupCCCTT
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.823-34_823-30dupCCCTT
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.318-34_318-30dupCCCTT
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.796-34_796-30dupCCCTT
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.679-34_679-30dupCCCTT
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.679-34_679-30dupCCCTT
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23140
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2786
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3934
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1881
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

19-7605777-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605777
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605777
    reference: chr 19
allele count: 1
allele frequency: 8.75457426505349e-6
allele num: 114226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.679-32C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.263-41C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.823-32C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.679-32C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.796-32C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.679-32C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.318-32C>T
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2741
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2725
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9462
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23164
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13304
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4479
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3905
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2166
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD

19-7605778-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605778
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605778
    reference: chr 19
allele count: 2
allele frequency: 1.750087504375219e-5
allele num: 114280
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.263-40T>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.318-31T>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.796-31T>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.679-31T>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.679-31T>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.679-31T>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.823-31T>A
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13391
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23196
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4480
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

19-7605781-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605781
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605781
    reference: chr 19
allele count: 1
allele frequency: 8.757487651942411e-6
allele num: 114188
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.823-28T>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.679-28T>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.679-28T>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.263-37T>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.796-28T>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.318-28T>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.679-28T>C
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9427
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2758
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23255
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1871
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8861
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

19-7605783-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605783
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605783
    reference: chr 19
allele count: 1
allele frequency: 8.764241893076249e-6
allele num: 114100
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.679-26T>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.796-26T>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.823-26T>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.263-35T>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.679-26T>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.679-26T>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.318-26T>G
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9426
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2749
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33598
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 891
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2166
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum

19-7605792-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605792
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605792
    reference: chr 19
allele count: 1
allele frequency: 8.798169980644026e-6
allele num: 113660
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.679-17G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.796-17G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.318-17G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.679-17G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.823-17G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.263-26G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.679-17G>A
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4476
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-7605793-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605793
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605793
    reference: chr 19
allele count: 8
allele frequency: 7.049203440011279e-5
allele num: 113488
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.318-16C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.263-25C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.679-16C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.679-16C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.796-16C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.679-16C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.823-16C>T
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9439
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13356
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23287
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1107
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3829
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4482
  bin: 9.75e1
  variant carriers: 8
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

19-7605795-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605795
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605795
    reference: chr 19
allele count: 1
allele frequency: 8.813678829543451e-6
allele num: 113460
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.679-14C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.679-14C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.263-23C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.823-14C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.679-14C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.796-14C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.318-14C>T
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9490
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2610
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13413
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1839
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1115
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3906
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

19-7605798-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605798
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605798
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 113346
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.679-11C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.263-20C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.796-11C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.679-11C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.823-11C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.318-11C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.679-11C>T
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23359
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9475
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2856
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33925
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8803
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3954
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1147
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum

19-7605800-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605800
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605800
    reference: chr 19
allele count: 1
allele frequency: 8.832049742104147e-6
allele num: 113224
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.318-9C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.679-9C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.823-9C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.679-9C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.796-9C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.679-9C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.263-18C>T
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2884
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23407
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1155
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4004
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ

19-7605803-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605803
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605803
    reference: chr 19
allele count: 1
allele frequency: 8.841420285754704e-6
allele num: 113104
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.796-6C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.318-6C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.263-15C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.679-6C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.679-6C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.679-6C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.823-6C>T
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13251
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9479
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1998
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34106
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4172
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 4.25e1
  variant carriers: 0
hgvs: c.823-6C>T
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

19-7605806-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605806
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605806
    reference: chr 19
allele count: 1
allele frequency: 8.858180529719195e-6
allele num: 112890
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.679-3C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.318-3C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.679-3C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.823-3C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.679-3C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.796-3C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.263-12C>T
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3000
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23420
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9475
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13048
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1188
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8771
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 8.25e1
  variant carriers: 0
hgvs: c.823-3C>T
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-7605809-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605809
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605809
    reference: chr 19
allele count: 1
allele frequency: 8.863676653075696e-6
allele num: 112820
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.796G>C
  hgvsp: ENSP00000473211.1:p.Gly266Arg
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.679G>C
  hgvsp: ENSP00000221249.5:p.Gly227Arg
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.679G>C
  hgvsp: ENSP00000394348.2:p.Gly227Arg
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.823G>C
  hgvsp: ENSP00000407509.2:p.Gly275Arg
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.679G>C
  hgvsp: ENSP00000443323.1:p.Gly227Arg
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.318G>C
  hgvsp: ENSP00000472456.1:p.Gly107Arg
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.263-9G>C
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3036
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23470
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1740
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8775
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4446
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly275Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

19-7605818-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605818
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605818
    reference: chr 19
allele count: 1
allele frequency: 8.907098957869422e-6
allele num: 112270
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.688C>T
  hgvsp: ENSP00000221249.5:p.His230Tyr
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.688C>T
  hgvsp: ENSP00000394348.2:p.His230Tyr
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.832C>T
  hgvsp: ENSP00000407509.2:p.His278Tyr
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.805C>T
  hgvsp: ENSP00000473211.1:p.His269Tyr
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.263C>T
  hgvsp: ENSP00000470060.1:p.His89Tyr
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.327C>T
  hgvsp: ENSP00000472456.1:p.His110Tyr
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.688C>T
  hgvsp: ENSP00000443323.1:p.His230Tyr
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11960
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9366
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1365
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33238
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
hgvs: p.His278Tyr
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

19-7605822-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605822
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605822
    reference: chr 19
allele count: 1
allele frequency: 8.956079386687684e-6
allele num: 111656
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.692C>T
  hgvsp: ENSP00000221249.5:p.Pro231Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.836C>T
  hgvsp: ENSP00000407509.2:p.Pro279Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.809C>T
  hgvsp: ENSP00000473211.1:p.Pro270Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.331C>T
  hgvsp: ENSP00000472456.1:p.Pro111Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.267C>T
  hgvsp: ENSP00000470060.1:p.Pro90Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.692C>T
  hgvsp: ENSP00000443323.1:p.Pro231Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.692C>T
  hgvsp: ENSP00000394348.2:p.Pro231Leu
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3359
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23137
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11129
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1971
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1635
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5628
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32010
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro279Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum

19-7605828-G-GGACCGTGTCTGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605828
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605840
    reference: chr 19
allele count: 1
allele frequency: 9.006899284852197e-6
allele num: 111026
alternate allele: GGACCGTGTCTGC
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsp: ENSP00000221249.5:p.Thr234_Ala237dup
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsp: ENSP00000394348.2:p.Thr234_Ala237dup
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsp: ENSP00000472456.1:p.Thr114_Ala117dup
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsp: ENSP00000473211.1:p.Thr273_Ala276dup
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsp: ENSP00000443323.1:p.Thr234_Ala237dup
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsp: ENSP00000407509.2:p.Thr282_Ala285dup
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsp: ENSP00000470060.1:p.Thr93_Ala96dup
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22738
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10545
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3622
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6429
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1217
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1504
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4456
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8316
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr282_Ala285dup
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

19-7605851-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605851
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605851
    reference: chr 19
allele count: 1
allele frequency: 9.7431700378035e-6
allele num: 102636
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.360C>T
  hgvsp: ENSP00000472456.1:p.Arg121Trp
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.865C>T
  hgvsp: ENSP00000407509.2:p.Arg289Trp
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.721C>T
  hgvsp: ENSP00000394348.2:p.Arg241Trp
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.721C>T
  hgvsp: ENSP00000221249.5:p.Arg241Trp
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.838C>T
  hgvsp: ENSP00000473211.1:p.Arg280Trp
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.296C>T
  hgvsp: ENSP00000470060.1:p.Arg100Trp
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.721C>T
  hgvsp: ENSP00000443323.1:p.Arg241Trp
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4474
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14959
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7933
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6568
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8788
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3238
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1138
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11990
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1326
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19023
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3505
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg289Trp
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

19-7605855-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605855
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605855
    reference: chr 19
allele count: 1
allele frequency: 9.765052828935805e-6
allele num: 102406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.725A>G
  hgvsp: ENSP00000394348.2:p.Asp242Gly
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.725A>G
  hgvsp: ENSP00000443323.1:p.Asp242Gly
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.869A>G
  hgvsp: ENSP00000407509.2:p.Asp290Gly
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.725A>G
  hgvsp: ENSP00000221249.5:p.Asp242Gly
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.364A>G
  hgvsp: ENSP00000472456.1:p.Asp122Gly
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.300A>G
  hgvsp: ENSP00000470060.1:p.Asp101Gly
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.842A>G
  hgvsp: ENSP00000473211.1:p.Asp281Gly
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6952
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3927
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8337
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10326
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9171
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1336
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 695
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2762
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12800
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3338
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp290Gly
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum

19-7605861-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605861
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605861
    reference: chr 19
allele count: 1
allele frequency: 1.004621257785815e-5
allele num: 99540
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.370C>G
  hgvsp: ENSP00000472456.1:p.Thr124Arg
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.731C>G
  hgvsp: ENSP00000443323.1:p.Thr244Arg
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.731C>G
  hgvsp: ENSP00000394348.2:p.Thr244Arg
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.848C>G
  hgvsp: ENSP00000473211.1:p.Thr283Arg
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.306C>G
  hgvsp: ENSP00000470060.1:p.Thr103Arg
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.731C>G
  hgvsp: ENSP00000221249.5:p.Thr244Arg
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.875C>G
  hgvsp: ENSP00000407509.2:p.Thr292Arg
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10367
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10602
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7926
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10008
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11303
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4319
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2751
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3635
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1186
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14618
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr292Arg
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-7605862-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605862
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605862
    reference: chr 19
allele count: 1
allele frequency: 1.002807862013638e-5
allele num: 99720
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.849G>A
  hgvsp: ENST00000600737.1:c.849G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.732G>A
  hgvsp: ENST00000221249.6:c.732G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.371G>A
  hgvsp: ENST00000595264.1:c.371G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.876G>A
  hgvsp: ENST00000414982.3:c.876G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.732G>A
  hgvsp: ENST00000450331.3:c.732G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.732G>A
  hgvsp: ENST00000545201.2:c.732G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.307G>A
  hgvsp: ENST00000594551.1:c.307G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9867
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10573
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10555
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8052
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4433
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 843
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16330
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13250
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3627
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr292Thr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP

19-7605868-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605868
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605868
    reference: chr 19
allele count: 1
allele frequency: 1.028383381324558e-5
allele num: 97240
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.738G>A
  hgvsp: ENST00000450331.3:c.738G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.738G>A
  hgvsp: ENST00000545201.2:c.738G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.738G>A
  hgvsp: ENST00000221249.6:c.738G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.313G>A
  hgvsp: ENST00000594551.1:c.313G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.377G>A
  hgvsp: ENST00000595264.1:c.377G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.855G>A
  hgvsp: ENST00000600737.1:c.855G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.882G>A
  hgvsp: ENST00000414982.3:c.882G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12591
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8715
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9915
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10702
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1138
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12595
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2629
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2936
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1780
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu294Leu
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP

19-7605870-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605870
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605870
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 93568
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.740G>C
  hgvsp: ENSP00000443323.1:p.Arg247Pro
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.884G>C
  hgvsp: ENSP00000407509.2:p.Arg295Pro
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.315G>C
  hgvsp: ENSP00000470060.1:p.Arg106Pro
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.740G>C
  hgvsp: ENSP00000221249.5:p.Arg247Pro
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.740G>C
  hgvsp: ENSP00000394348.2:p.Arg247Pro
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.857G>C
  hgvsp: ENSP00000473211.1:p.Arg286Pro
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.379G>C
  hgvsp: ENSP00000472456.1:p.Arg127Pro
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10735
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9888
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9388
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13054
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1214
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3323
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 960
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1958
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3924
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12754
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1324
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1961
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4423
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Arg295Pro
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

19-7605876-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605876
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605876
    reference: chr 19
allele count: 1
allele frequency: 1.000680462714646e-5
allele num: 99932
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.863C>T
  hgvsp: ENSP00000473211.1:p.Pro288Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.385C>T
  hgvsp: ENSP00000472456.1:p.Pro129Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.746C>T
  hgvsp: ENSP00000443323.1:p.Pro249Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.746C>T
  hgvsp: ENSP00000221249.5:p.Pro249Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.321C>T
  hgvsp: ENSP00000470060.1:p.Pro108Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.746C>T
  hgvsp: ENSP00000394348.2:p.Pro249Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.890C>T
  hgvsp: ENSP00000407509.2:p.Pro297Leu
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11387
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5508
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10029
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8985
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2939
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4436
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3098
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro297Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

19-7605877-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605877
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605877
    reference: chr 19
allele count: 4
allele frequency: 4.015096763832008e-5
allele num: 99624
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.747G>A
  hgvsp: ENST00000450331.3:c.747G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.891G>A
  hgvsp: ENST00000414982.3:c.891G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.747G>A
  hgvsp: ENST00000221249.6:c.747G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.747G>A
  hgvsp: ENST00000545201.2:c.747G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.322G>A
  hgvsp: ENST00000594551.1:c.322G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.386G>A
  hgvsp: ENST00000595264.1:c.386G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.864G>A
  hgvsp: ENST00000600737.1:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9070
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9950
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16600
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23606
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14753
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1503
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2990
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2779
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1967
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro297Pro
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ

19-7605884-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605884
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605884
    reference: chr 19
allele count: 1
allele frequency: 1.015310888193965e-5
allele num: 98492
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.898G>A
  hgvsp: ENSP00000407509.2:p.Ala300Thr
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.329G>A
  hgvsp: ENSP00000470060.1:p.Ala111Thr
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.754G>A
  hgvsp: ENSP00000221249.5:p.Ala252Thr
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.871G>A
  hgvsp: ENSP00000473211.1:p.Ala291Thr
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.754G>A
  hgvsp: ENSP00000443323.1:p.Ala252Thr
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.393G>A
  hgvsp: ENSP00000472456.1:p.Ala132Thr
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.754G>A
  hgvsp: ENSP00000394348.2:p.Ala252Thr
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9782
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10687
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10728
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2964
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1314
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2587
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20778
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4432
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ala300Thr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum

19-7605887-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605887
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605887
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 98232
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.757T>C
  hgvsp: ENSP00000443323.1:p.Phe253Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.901T>C
  hgvsp: ENSP00000407509.2:p.Phe301Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.332T>C
  hgvsp: ENSP00000470060.1:p.Phe112Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.874T>C
  hgvsp: ENSP00000473211.1:p.Phe292Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.757T>C
  hgvsp: ENSP00000221249.5:p.Phe253Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.757T>C
  hgvsp: ENSP00000394348.2:p.Phe253Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.396T>C
  hgvsp: ENSP00000472456.1:p.Phe133Leu
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 9993
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10943
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10498
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3027
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1456
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1979
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1473
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15982
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1942
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Phe301Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/19-7605889-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605889
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605889
    reference: chr 19
allele count: 1
allele frequency: 1.021513065152103e-5
allele num: 97894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.876C>A
  hgvsp: ENSP00000473211.1:p.Phe292Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.903C>A
  hgvsp: ENSP00000407509.2:p.Phe301Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.334C>A
  hgvsp: ENSP00000470060.1:p.Phe112Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.759C>A
  hgvsp: ENSP00000221249.5:p.Phe253Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.759C>A
  hgvsp: ENSP00000443323.1:p.Phe253Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.759C>A
  hgvsp: ENSP00000394348.2:p.Phe253Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.398C>A
  hgvsp: ENSP00000472456.1:p.Phe133Leu
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5344
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10075
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10304
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11030
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15674
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1535
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1483
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19870
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2165
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16054
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3054
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 848
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Phe301Leu
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

19-7605892-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605892
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605892
    reference: chr 19
allele count: 3
allele frequency: 3.080841275057509e-5
allele num: 97376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.762C>T
  hgvsp: ENST00000545201.2:c.762C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.762C>T
  hgvsp: ENST00000221249.6:c.762C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.337C>T
  hgvsp: ENST00000594551.1:c.337C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.879C>T
  hgvsp: ENST00000600737.1:c.879C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.762C>T
  hgvsp: ENST00000450331.3:c.762C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.906C>T
  hgvsp: ENST00000414982.3:c.906C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.401C>T
  hgvsp: ENST00000595264.1:c.401C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10077
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10943
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16019
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16172
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1894
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1783
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser302Ser
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

19-7605893-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605893
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605893
    reference: chr 19
allele count: 1
allele frequency: 1.027749229188078e-5
allele num: 97300
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.763G>A
  hgvsp: ENSP00000221249.5:p.Ala255Thr
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.338G>A
  hgvsp: ENSP00000470060.1:p.Ala114Thr
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.402G>A
  hgvsp: ENSP00000472456.1:p.Ala135Thr
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.907G>A
  hgvsp: ENSP00000407509.2:p.Ala303Thr
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.763G>A
  hgvsp: ENSP00000394348.2:p.Ala255Thr
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.763G>A
  hgvsp: ENSP00000443323.1:p.Ala255Thr
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.880G>A
  hgvsp: ENSP00000473211.1:p.Ala294Thr
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9937
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10944
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5015
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4431
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21174
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1490
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1842
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala303Thr
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

19-7605894-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605894
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605894
    reference: chr 19
allele count: 4
allele frequency: 4.123371268349002e-5
allele num: 97008
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.764C>T
  hgvsp: ENSP00000221249.5:p.Ala255Val
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.339C>T
  hgvsp: ENSP00000470060.1:p.Ala114Val
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.908C>T
  hgvsp: ENSP00000407509.2:p.Ala303Val
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.403C>T
  hgvsp: ENSP00000472456.1:p.Ala135Val
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.881C>T
  hgvsp: ENSP00000473211.1:p.Ala294Val
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.764C>T
  hgvsp: ENSP00000394348.2:p.Ala255Val
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.764C>T
  hgvsp: ENSP00000443323.1:p.Ala255Val
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5003
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16278
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10463
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11034
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9716
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1449
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20433
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16288
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1614
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2995
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala303Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

19-7605903-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605903
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605903
    reference: chr 19
allele count: 1
allele frequency: 1.045718827121763e-5
allele num: 95628
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.773C>G
  hgvsp: ENSP00000443323.1:p.Thr258Ser
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.917C>G
  hgvsp: ENSP00000407509.2:p.Thr306Ser
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.348C>G
  hgvsp: ENSP00000470060.1:p.Thr117Ser
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.890C>G
  hgvsp: ENSP00000473211.1:p.Thr297Ser
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.412C>G
  hgvsp: ENSP00000472456.1:p.Thr138Ser
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.773C>G
  hgvsp: ENSP00000221249.5:p.Thr258Ser
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.773C>G
  hgvsp: ENSP00000394348.2:p.Thr258Ser
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4257
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11474
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9195
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2820
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1632
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr306Ser
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

19-7605912-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605912
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605912
    reference: chr 19
allele count: 1
allele frequency: 1.064758619221023e-5
allele num: 93918
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.926C>T
  hgvsp: ENSP00000407509.2:p.Pro309Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.357C>T
  hgvsp: ENSP00000470060.1:p.Pro120Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.782C>T
  hgvsp: ENSP00000443323.1:p.Pro261Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.782C>T
  hgvsp: ENSP00000394348.2:p.Pro261Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.782C>T
  hgvsp: ENSP00000221249.5:p.Pro261Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.899C>T
  hgvsp: ENSP00000473211.1:p.Pro300Leu
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.421C>T
  hgvsp: ENSP00000472456.1:p.Pro141Leu
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8737
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16212
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11839
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12003
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4430
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1567
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21409
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2735
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro309Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

19-7605913-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605913
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605913
    reference: chr 19
allele count: 1
allele frequency: 1.071627587980625e-5
allele num: 93316
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.900G>A
  hgvsp: ENST00000600737.1:c.900G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.783G>A
  hgvsp: ENST00000221249.6:c.783G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.783G>A
  hgvsp: ENST00000545201.2:c.783G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.783G>A
  hgvsp: ENST00000450331.3:c.783G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.358G>A
  hgvsp: ENST00000594551.1:c.358G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.422G>A
  hgvsp: ENST00000595264.1:c.422G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.927G>A
  hgvsp: ENST00000414982.3:c.927G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3851
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12065
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3025
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18636
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2782
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1637
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro309Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

19-7605920-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605920
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605920
    reference: chr 19
allele count: 6
allele frequency: 6.52968831621104e-5
allele num: 91888
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.429T>C
  hgvsp: ENST00000595264.1:c.429T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.790T>C
  hgvsp: ENST00000545201.2:c.790T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.907T>C
  hgvsp: ENST00000600737.1:c.907T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.790T>C
  hgvsp: ENST00000450331.3:c.790T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.365T>C
  hgvsp: ENST00000594551.1:c.365T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.790T>C
  hgvsp: ENST00000221249.6:c.790T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.934T>C
  hgvsp: ENST00000414982.3:c.934T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12790
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7854
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14147
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3971
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13650
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19953
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3364
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3052
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1784
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu312Leu
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ

19-7605922-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605922
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605922
    reference: chr 19
allele count: 1
allele frequency: 1.096731739416539e-5
allele num: 91180
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.792G>A
  hgvsp: ENST00000545201.2:c.792G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.936G>A
  hgvsp: ENST00000414982.3:c.936G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.792G>A
  hgvsp: ENST00000221249.6:c.792G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.431G>A
  hgvsp: ENST00000595264.1:c.431G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.909G>A
  hgvsp: ENST00000600737.1:c.909G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.367G>A
  hgvsp: ENST00000594551.1:c.367G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.792G>A
  hgvsp: ENST00000450331.3:c.792G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14064
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12987
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13595
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7568
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1012
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1886
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3504
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1939
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu312Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/19-7605947-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605947
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605947
    reference: chr 19
allele count: 7
allele frequency: 8.244023083264634e-5
allele num: 84910
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.924+10C>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.807+10C>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.807+10C>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.382+10C>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.807+10C>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.951+10C>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.446+10C>A
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5086
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14645
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18898
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8864
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3789
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 725
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4513
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11204
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3264
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

19-7605948-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605948
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605948
    reference: chr 19
allele count: 1
allele frequency: 1.179300910420303e-5
allele num: 84796
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.951+11C>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.446+11C>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.807+11C>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.807+11C>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.924+11C>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.382+11C>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.807+11C>G
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18878
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14691
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5048
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11572
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24200
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4214
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4512
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1806
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3290
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum

19-7605956-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605956
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605956
    reference: chr 19
allele count: 1
allele frequency: 1.224799745241653e-5
allele num: 81646
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.807+19C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.924+19C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.951+19C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.807+19C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.807+19C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.446+19C>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.382+19C>T
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4771
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14916
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3823
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4206
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7014
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2400
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1767
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4429
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum

19-7605966-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605966
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605966
    reference: chr 19
allele count: 2
allele frequency: 2.547835613646208e-5
allele num: 78498
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.807+29C>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.807+29C>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.951+29C>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.382+29C>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.924+29C>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.807+29C>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.446+29C>G
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5213
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21653
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3381
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1748
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4800
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6036
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23545
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD

19-7605973-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605973
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605973
    reference: chr 19
allele count: 1
allele frequency: 1.316655694535879e-5
allele num: 75950
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.924+36G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.446+36G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.807+36G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.382+36G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.951+36G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.807+36G>T
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.807+36G>T
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21063
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5762
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7243
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3480
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1914
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 941
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5451
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22304
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3476
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/19-7605979-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7605979
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7605979
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 71248
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.446+42A>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.924+42A>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.951+42A>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.807+42A>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.807+42A>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.382+42A>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.807+42A>C
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19609
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8024
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17685
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5977
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1179
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6871
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19177
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5256
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3343
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3555
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

19-7606191-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606191
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7606191
    reference: chr 19
allele count: 1
allele frequency: 9.825306058283716e-6
allele num: 101778
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.925-49T>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.447-49T>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.383-49T>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.808-49T>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.952-49T>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.808-49T>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.808-49T>C
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8422
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17623
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13329
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4531
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6701
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1612
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3171
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3518
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4806
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8044
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

19-7606192-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606192
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7606192
    reference: chr 19
allele count: 20
allele frequency: 1.96811651249754e-4
allele num: 101620
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.925-48G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.952-48G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.447-48G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.808-48G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.808-48G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.808-48G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.383-48G>A
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17599
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9640
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8412
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12854
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4631
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3044
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2284
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6656
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7257
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11069
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4706
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3053
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

19-7606204-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606204
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7606204
    reference: chr 19
allele count: 1
allele frequency: 9.724599346506924e-6
allele num: 102832
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.952-36G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.808-36G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.808-36G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.447-36G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.808-36G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.383-36G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.925-36G>A
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5729
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17058
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15765
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7961
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6850
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6643
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3143
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2485
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP

19-7606204-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606204
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7606203
    reference: chr 19
allele count: 1
allele frequency: 9.724599346506924e-6
allele num: 102832
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.383-32delC
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.925-32delC
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.808-32delC
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.808-32delC
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.447-32delC
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.952-32delC
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.808-32delC
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17058
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5729
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6850
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15765
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7961
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3143
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5478
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4308
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19419
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2485
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6643
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: GC
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

19-7606209-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606209
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7606209
    reference: chr 19
allele count: 1
allele frequency: 9.5565749235474e-6
allele num: 104640
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.952-31A>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.808-31A>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.447-31A>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.925-31A>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.383-31A>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.808-31A>G
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.808-31A>G
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7688
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21925
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4481
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6276
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1401
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8677
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3847
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3139
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-7606215-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606215
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7606215
    reference: chr 19
allele count: 5
allele frequency: 4.728042968454497e-5
allele num: 105752
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.925-25T>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.447-25T>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.808-25T>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.808-25T>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.808-25T>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.952-25T>C
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.383-25T>C
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25229
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10748
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6903
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1088
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8242
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

19-7606215-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606215
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7606214
    reference: chr 19
allele count: 1
allele frequency: 9.456085936908994e-6
allele num: 105752
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.383-23delG
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.808-23delG
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.808-23delG
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.447-23delG
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.925-23delG
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.952-23delG
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.808-23delG
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10748
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6903
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25229
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2799
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4703
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1067
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3144
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3137
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3435
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: TG
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff

19-7606217-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7606217
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 7606217
    reference: chr 19
allele count: 3
allele frequency: 2.827574506588249e-5
allele num: 106098
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000221249
  ensembl transcript: ENST00000221249
  gene symbol: PNPLA6
  hgvsc: ENST00000221249.6:c.808-23G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000443323
  ensembl transcript: ENST00000545201
  gene symbol: PNPLA6
  hgvsc: ENST00000545201.2:c.808-23G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000472456
  ensembl transcript: ENST00000595264
  gene symbol: PNPLA6
  hgvsc: ENST00000595264.1:c.447-23G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000407509
  ensembl transcript: ENST00000414982
  gene symbol: PNPLA6
  hgvsc: ENST00000414982.3:c.952-23G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000470060
  ensembl transcript: ENST00000594551
  gene symbol: PNPLA6
  hgvsc: ENST00000594551.1:c.383-23G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000473211
  ensembl transcript: ENST00000600737
  gene symbol: PNPLA6
  hgvsc: ENST00000600737.1:c.925-23G>A
  variant of: http://identifiers.org/hgnc/16268
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000032444
  ensembl protein: ENSP00000394348
  ensembl transcript: ENST00000450331
  gene symbol: PNPLA6
  hgvsc: ENST00000450331.3:c.808-23G>A
  variant of: http://identifiers.org/hgnc/16268
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3237
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7298
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7057
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 1629
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2211
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2038
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1258
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2462
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1821
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1575
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47690
bin: 9.75e1
variant carriers: 10823

European (Non-Finnish)
type: Population
allele count: 6122
allele frequency: 9.174009470718696e-2
allele num: 66732
num of homozygotes: 298

Latino
type: Population
allele count: 2585
allele frequency: 2.232682674036967e-1
allele num: 11578
num of homozygotes: 306

South Asian
type: Population
allele count: 1825
allele frequency: 1.105256782945736e-1
allele num: 16512
num of homozygotes: 121

Other
type: Population
allele count: 96
allele frequency: 1.05726872246696e-1
allele num: 908
num of homozygotes: 8

East Asian
type: Population
allele count: 54
allele frequency: 6.23988906863878e-3
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 177
allele frequency: 1.701268742791234e-2
allele num: 10404
num of homozygotes: 3

European (Finnish)
type: Population
allele count: 755
allele frequency: 1.141863278886872e-1
allele num: 6612
num of homozygotes: 47

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.79e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.208097e6

QD
type: SiteQuality
SIO_000300: 1.284e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.867e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1479
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45173
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2878
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2169
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2734
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
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Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.975e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.13e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.03e-1

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.028e0

InbreedingCoeff
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SIO_000300: 0.0e0

VQSLOD
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SIO_000300: -7.907e-1

MQRankSum
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SIO_000300: -4.98e-1

DP
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SIO_000300: 3.295306e6

QD
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SIO_000300: 1.137e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
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allele count: 2
allele frequency: 1.922337562475971e-4
allele num: 10404
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

FS
type: SiteQuality
SIO_000300: 5.669999999999999e-1

MQRankSum
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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QD
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DP
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MQ
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
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FS
type: SiteQuality
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DP
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SIO_000300: 3.295068e6

VQSLOD
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BaseQRankSum
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SIO_000300: -4.219e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

ReadPosRankSum
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MQRankSum
type: SiteQuality
SIO_000300: -9.47e-1

InbreedingCoeff
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SIO_000300: 0.0e0

QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66730
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South Asian
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allele num: 16512
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African
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allele frequency: 0.0e0
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Other
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.2e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.294962e6

MQ
type: SiteQuality
SIO_000300: 5.932e1

QD
type: SiteQuality
SIO_000300: 9.25e0

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 2.025e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.69e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
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African
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allele count: 13
allele frequency: 1.249279261964251e-3
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.95e1

MQRankSum
type: SiteQuality
SIO_000300: -1.48e-1

FS
type: SiteQuality
SIO_000300: 6.29e-1

BaseQRankSum
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SIO_000300: -3.83e0

QD
type: SiteQuality
SIO_000300: 1.274e1

DP
type: SiteQuality
SIO_000300: 3.294982e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.65e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.495863805299125e-5
allele num: 66728
num of homozygotes: 0

Latino
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South Asian
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allele count: 0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.766999999999999e0

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
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VQSLOD
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DP
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MQRankSum
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QD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
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East Asian
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Other
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.498935755613514e-5
allele num: 66714
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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DP
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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QD
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
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Other
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Latino
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South Asian
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African
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European (Finnish)
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allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
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ClippingRankSum
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QD
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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MQ
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DP
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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allele num: 16512
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Latino
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African
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East Asian
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Other
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ClippingRankSum
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QD
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FS
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VQSLOD
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BaseQRankSum
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DP
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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Other
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East Asian
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Latino
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African
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South Asian
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FS
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ReadPosRankSum
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ClippingRankSum
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QD
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MQRankSum
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BaseQRankSum
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SIO_000300: -4.536e0

VQSLOD
type: SiteQuality
SIO_000300: 1.42e-1

DP
type: SiteQuality
SIO_000300: 3.292641e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.899e1

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1849
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2600
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998410842253606e-5
allele num: 66702
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.24e-1

FS
type: SiteQuality
SIO_000300: 8.74e-1

DP
type: SiteQuality
SIO_000300: 3.291329e6

QD
type: SiteQuality
SIO_000300: 1.371e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.612e0

MQRankSum
type: SiteQuality
SIO_000300: 3.29e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.56e0

GenotypeQuality
all individuals: 2550
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 58
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1447
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1797
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2354
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 45435
bin: 9.75e1
variant carriers: 2596

GenotypeQuality
all individuals: 2651
bin: 9.25e1
variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 42
allele frequency: 6.295718911140425e-4
allele num: 66712
num of homozygotes: 1

Latino
type: Population
allele count: 2498
allele frequency: 2.164644714038128e-1
allele num: 11540
num of homozygotes: 276

East Asian
type: Population
allele count: 293
allele frequency: 3.387283236994219e-2
allele num: 8650
num of homozygotes: 12

Other
type: Population
allele count: 15
allele frequency: 1.655629139072848e-2
allele num: 906
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 6
allele frequency: 9.074410163339383e-4
allele num: 6612
num of homozygotes: 1

African
type: Population
allele count: 27
allele frequency: 2.595654681791963e-3
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 31
allele frequency: 1.877422480620155e-3
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.709e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.93e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.952e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-1

QD
type: SiteQuality
SIO_000300: 1.762e1

DP
type: SiteQuality
SIO_000300: 3.312671e6

GenotypeQuality
all individuals: 58
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2354
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1447
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45435
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 2550
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.844961240310077e-4
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.93e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

DP
type: SiteQuality
SIO_000300: 3.312671e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.709e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-1

QD
type: SiteQuality
SIO_000300: 1.762e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.952e0

GenotypeQuality
all individuals: 2163
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44911
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 2800
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1908
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2592
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.494678778067572e-5
allele num: 66714
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.975e1

DP
type: SiteQuality
SIO_000300: 3.288662e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.094e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-2

QD
type: SiteQuality
SIO_000300: 1.461e1

GenotypeQuality
all individuals: 1463
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2794
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2151
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2438
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.58e-1

QD
type: SiteQuality
SIO_000300: 1.492e1

VQSLOD
type: SiteQuality
SIO_000300: -1.892e-1

MQ
type: SiteQuality
SIO_000300: 5.868e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.4e-2

DP
type: SiteQuality
SIO_000300: 3.287778e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.07e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2447
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1884
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44896
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2794
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2438
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.287778e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.868e1

VQSLOD
type: SiteQuality
SIO_000300: -1.892e-1

QD
type: SiteQuality
SIO_000300: 1.492e1

MQRankSum
type: SiteQuality
SIO_000300: 6.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.07e-1

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44890
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 59
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1886
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1868
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1467
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729206294310911e-4
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66686
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.768121515093252e-4
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.013e0

DP
type: SiteQuality
SIO_000300: 3.287589e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 4.073e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

QD
type: SiteQuality
SIO_000300: 1.159e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.149999999999999e-1

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2128
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1827
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2164
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44895
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 2441
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2795
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1476
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.19997600047999e-4
allele num: 66668
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.5e-1

QD
type: SiteQuality
SIO_000300: 1.88e1

DP
type: SiteQuality
SIO_000300: 3.286947e6

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 2.445e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.96e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.96e-1

GenotypeQuality
all individuals: 1870
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2044
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2442
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44885
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 319
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1831
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499790029395885e-5
allele num: 66676
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.26e-1

MQ
type: SiteQuality
SIO_000300: 5.908e1

QD
type: SiteQuality
SIO_000300: 1.434e1

VQSLOD
type: SiteQuality
SIO_000300: 3.63e-1

DP
type: SiteQuality
SIO_000300: 3.286309e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.45e0

FS
type: SiteQuality
SIO_000300: 3.638e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

GenotypeQuality
all individuals: 409
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4495
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8665
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29781
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 941
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1989
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.130456105934282e-5
allele num: 16312
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.58856235107228e-5
allele num: 62950
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11316
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9028
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5812
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.97e0

VQSLOD
type: SiteQuality
SIO_000300: 4.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.664074e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.887e0

QD
type: SiteQuality
SIO_000300: 1.09e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 343
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 8.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.229228368523295e-4
allele num: 62802
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.541076487252125e-4
allele num: 11296
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5770
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.112099644128114e-4
allele num: 8992
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8464
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.09e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.37e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

DP
type: SiteQuality
SIO_000300: 1.664776e6

MQ
type: SiteQuality
SIO_000300: 5.946e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

FS
type: SiteQuality
SIO_000300: 2.564e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.65e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62950
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.10692937790569e-4
allele num: 9034
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5784
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.665773e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.241e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.64e-1

FS
type: SiteQuality
SIO_000300: 1.653e0

VQSLOD
type: SiteQuality
SIO_000300: -1.294e-1

QD
type: SiteQuality
SIO_000300: 7.75e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5927624872579e-5
allele num: 62784
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5780
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11312
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16300
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8956
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.99e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.79e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

DP
type: SiteQuality
SIO_000300: 1.672746e6

MQ
type: SiteQuality
SIO_000300: 5.079e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

QD
type: SiteQuality
SIO_000300: 7.14e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16286
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8912
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.846426043878273e-5
allele num: 11304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5772
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62648
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.222e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

DP
type: SiteQuality
SIO_000300: 1.673334e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.95e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.765e0

VQSLOD
type: SiteQuality
SIO_000300: -3.407e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.58e0

QD
type: SiteQuality
SIO_000300: 5.22e0

GenotypeQuality
all individuals: 1869
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8836
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8920
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5768
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.360717658168083e-4
allele num: 8472
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62690
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.673773e6

MQRankSum
type: SiteQuality
SIO_000300: -1.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.55e-1

QD
type: SiteQuality
SIO_000300: 8.92e0

FS
type: SiteQuality
SIO_000300: 4.088e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.18e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.400000000000001e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5768
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11300
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.596729897170594e-5
allele num: 62628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.461e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.47e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

DP
type: SiteQuality
SIO_000300: 1.673505e6

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5760
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62574
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.144015728680265e-5
allele num: 16276
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.02e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.132e0

QD
type: SiteQuality
SIO_000300: 1.104e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.672759e6

MQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16256
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8796
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.604878831648211e-5
allele num: 62310
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

QD
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

European (Non-Finnish)
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allele count: 8
allele frequency: 1.28571887756742e-4
allele num: 62222
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16244
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5722
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8446
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11286
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

VQSLOD
type: SiteQuality
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MQRankSum
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FS
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BaseQRankSum
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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African
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allele frequency: 1.143118427069044e-4
allele num: 8748
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
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VQSLOD
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QD
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DP
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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FS
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SIO_000300: 0.0e0

ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 5716
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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DP
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ClippingRankSum
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InbreedingCoeff
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MQ
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FS
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QD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 62090
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African
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allele frequency: 1.153668666359022e-4
allele num: 8668
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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QD
type: SiteQuality
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ClippingRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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SIO_000300: -9.78e-1

MQRankSum
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.706e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

South Asian
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allele frequency: 6.16294835449279e-5
allele num: 16226
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5700
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11254
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62036
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African
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allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.517e0

DP
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -2.4e-3

MQRankSum
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.69e-1

BaseQRankSum
type: SiteQuality
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QD
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MQ
type: SiteQuality
SIO_000300: 5.952e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.37e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5684
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61904
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.892050506846879e-5
allele num: 11246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.13e-1

QD
type: SiteQuality
SIO_000300: 1.881e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.3e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.664049e6

FS
type: SiteQuality
SIO_000300: 1.586e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.1e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61880
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5680
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8586
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16204
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Latino
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allele frequency: 8.906305664410402e-5
allele num: 11228
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.220000000000001e0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 16144
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.623534759879209e-5
allele num: 61594
num of homozygotes: 0

East Asian
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DP
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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InbreedingCoeff
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MQ
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MQRankSum
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ReadPosRankSum
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QD
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BaseQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 5578
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East Asian
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allele num: 8376
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Latino
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num of homozygotes: 0

African
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Other
type: Population
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South Asian
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61238
num of homozygotes: 0

MQ
type: SiteQuality
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ReadPosRankSum
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QD
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ClippingRankSum
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InbreedingCoeff
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FS
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VQSLOD
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 60866
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African
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South Asian
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East Asian
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Latino
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European (Finnish)
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Other
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QD
type: SiteQuality
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MQ
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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FS
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ReadPosRankSum
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DP
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.776009661492559e-5
allele num: 56306
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Latino
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South Asian
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African
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European (Finnish)
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East Asian
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MQRankSum
type: SiteQuality
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ClippingRankSum
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SIO_000300: 8.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.11e-1

FS
type: SiteQuality
SIO_000300: 2.999e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

DP
type: SiteQuality
SIO_000300: 1.369204e6

QD
type: SiteQuality
SIO_000300: 1.139e1

VQSLOD
type: SiteQuality
SIO_000300: 3.85e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.5e-3

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20332
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56212
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15268
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7838
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.311647429171039e-4
allele num: 7624
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.0e-3

FS
type: SiteQuality
SIO_000300: 2.128e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.51e-1

DP
type: SiteQuality
SIO_000300: 1.349288e6

MQ
type: SiteQuality
SIO_000300: 5.906e1

VQSLOD
type: SiteQuality
SIO_000300: -3.037e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQRankSum
type: SiteQuality
SIO_000300: -6.34e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4166
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 658
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.827618977995468e-5
allele num: 54716
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15060
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.36e-1

DP
type: SiteQuality
SIO_000300: 1.29255e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.661e1

FS
type: SiteQuality
SIO_000300: 1.6952e1

VQSLOD
type: SiteQuality
SIO_000300: -2.198e0

MQRankSum
type: SiteQuality
SIO_000300: 9.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.48e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4242
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.825350467289719e-5
allele num: 54784
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7658
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7372
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15060
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9942
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.276e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.07e0

MQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.419e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

QD
type: SiteQuality
SIO_000300: 2.744e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.290847e6

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 494
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7196
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9726
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.869997756002693e-5
allele num: 53476
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.584e0

MQRankSum
type: SiteQuality
SIO_000300: -1.584e0

VQSLOD
type: SiteQuality
SIO_000300: -7.697000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.99e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.027e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.25986e6

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 291
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7304
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9426
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14694
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3220
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 584
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.267671e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.849e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.87e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.7241e1

MQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.73e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.213e0

QD
type: SiteQuality
SIO_000300: 1.37e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7688
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7670
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.81646443362639e-5
allele num: 55052
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

FS
type: SiteQuality
SIO_000300: 6.314e0

VQSLOD
type: SiteQuality
SIO_000300: 2.96e-1

DP
type: SiteQuality
SIO_000300: 1.315154e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.041e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.526e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.2e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.311303435615001e-4
allele num: 7626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9738
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7658
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14764
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.642721841760163e-5
allele num: 54904
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 2.344116268166901e-4
allele num: 4266
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.36e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.387e0

QD
type: SiteQuality
SIO_000300: 1.393e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.7e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.7e-2

DP
type: SiteQuality
SIO_000300: 1.315648e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4136
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 670
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7608
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.04384133611691e-4
allele num: 9580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54270
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.468e0

VQSLOD
type: SiteQuality
SIO_000300: -1.916e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.27e-1

QD
type: SiteQuality
SIO_000300: 9.42e0

DP
type: SiteQuality
SIO_000300: 1.290884e6

MQ
type: SiteQuality
SIO_000300: 5.907e1

FS
type: SiteQuality
SIO_000300: 9.132e0

MQRankSum
type: SiteQuality
SIO_000300: -8.6e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54120
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 670
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4112
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.82e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -9.565e-1

DP
type: SiteQuality
SIO_000300: 1.283666e6

BaseQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

MQ
type: SiteQuality
SIO_000300: 5.705e1

GenotypeQuality
all individuals: 193
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variant carriers: 0

GenotypeQuality
all individuals: 1967
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 631
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2491
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4430
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 312
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.88041832943443e-5
allele num: 14534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53910
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4082
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9514
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.280644e6

QD
type: SiteQuality
SIO_000300: 9.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e-1

MQ
type: SiteQuality
SIO_000300: 5.987e1

FS
type: SiteQuality
SIO_000300: 5.234e0

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.875e0

GenotypeQuality
all individuals: 826
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3002
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 1530
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2420
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4044
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.595553400231283e-5
allele num: 53614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.3e-2

FS
type: SiteQuality
SIO_000300: 1.987e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

DP
type: SiteQuality
SIO_000300: 1.278949e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.023e1

GenotypeQuality
all individuals: 1489
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1427
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2926
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2408
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14470
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.865880509012203e-5
allele num: 53594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4020
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.79e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.909999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.198e0

FS
type: SiteQuality
SIO_000300: 6.094e0

QD
type: SiteQuality
SIO_000300: 1.277e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.29e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.277369e6

GenotypeQuality
all individuals: 789
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1884
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variant carriers: 0

GenotypeQuality
all individuals: 698
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variant carriers: 0

GenotypeQuality
all individuals: 4433
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 495
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variant carriers: 0

GenotypeQuality
all individuals: 2918
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2373
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.064282673478076e-4
allele num: 9396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.612302166348636e-5
allele num: 53454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14428
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4002
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.65e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.606e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e-1

DP
type: SiteQuality
SIO_000300: 1.273021e6

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

MQ
type: SiteQuality
SIO_000300: 5.896e1

GenotypeQuality
all individuals: 21224
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2293
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2878
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17357
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4430
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1325
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.899479542605326e-5
allele num: 52646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9262
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7460
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.41e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.94e-2

DP
type: SiteQuality
SIO_000300: 1.256765e6

FS
type: SiteQuality
SIO_000300: 6.094e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.94e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

GenotypeQuality
all individuals: 354
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18322
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
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variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1512
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2955
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2172
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.933413247747573e-5
allele num: 51722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7340
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14096
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3740
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.649999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.206e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.419999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

FS
type: SiteQuality
SIO_000300: 2.075e0

DP
type: SiteQuality
SIO_000300: 1.239871e6

GenotypeQuality
all individuals: 378
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1007
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 867
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variant carriers: 0

GenotypeQuality
all individuals: 815
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variant carriers: 0

GenotypeQuality
all individuals: 189
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variant carriers: 0

GenotypeQuality
all individuals: 1558
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variant carriers: 0

GenotypeQuality
all individuals: 2120
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GenotypeQuality
all individuals: 20339
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variant carriers: 0

GenotypeQuality
all individuals: 4430
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 457
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14032
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3700
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.37324910738808e-4
allele num: 7282
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8992
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.230755e6

FS
type: SiteQuality
SIO_000300: 1.05e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.686e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

QD
type: SiteQuality
SIO_000300: 2.645e1

GenotypeQuality
all individuals: 1631
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 442
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variant carriers: 0

GenotypeQuality
all individuals: 96
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GenotypeQuality
all individuals: 18098
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
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GenotypeQuality
all individuals: 4435
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2025
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1255
bin: 5.25e1
variant carriers: 1

Latino
type: Population
allele count: 6
allele frequency: 6.787330316742081e-4
allele num: 8840
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7202
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.5e-3

DP
type: SiteQuality
SIO_000300: 1.197293e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

FS
type: SiteQuality
SIO_000300: 3.408e0

MQRankSum
type: SiteQuality
SIO_000300: 3.98e-1

QD
type: SiteQuality
SIO_000300: 1.231e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 149
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3151
bin: 3.25e1
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GenotypeQuality
all individuals: 289
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20211
bin: 2.25e1
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GenotypeQuality
all individuals: 1472
bin: 5.25e1
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GenotypeQuality
all individuals: 17076
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4430
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 428
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50210
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7130
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7134
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.236937328122738e-5
allele num: 13818
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8770
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

DP
type: SiteQuality
SIO_000300: 1.186497e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.77e-1

QD
type: SiteQuality
SIO_000300: 1.637e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.6e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.74e-1

GenotypeQuality
all individuals: 23992
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1834
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 4.25e1
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GenotypeQuality
all individuals: 1090
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 2.5e0
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GenotypeQuality
all individuals: 260
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1341
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4434
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 4232
bin: 3.25e1
variant carriers: 1

African
type: Population
allele count: 7
allele frequency: 1.062860613422411e-3
allele num: 6586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8068
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3044
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13220
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6658
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46780
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.01e-1

DP
type: SiteQuality
SIO_000300: 1.070334e6

FS
type: SiteQuality
SIO_000300: 5.69e0

MQRankSum
type: SiteQuality
SIO_000300: 3.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.399999999999999e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -6.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

QD
type: SiteQuality
SIO_000300: 1.105e1

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1335
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8074
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3022
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13222
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.140777530399041e-5
allele num: 46712
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.615e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.98e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.500000000000001e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.49e-1

DP
type: SiteQuality
SIO_000300: 1.069759e6

QD
type: SiteQuality
SIO_000300: 6.33e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.11e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6176
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.225981657911139e-5
allele num: 44924
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7750
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2826
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12970
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.976e0

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.12e-2

QD
type: SiteQuality
SIO_000300: 3.34e1

DP
type: SiteQuality
SIO_000300: 1.006445e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.35e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6266
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12702
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.642094513044285e-5
allele num: 43084
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.042e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.179999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.32e-2

DP
type: SiteQuality
SIO_000300: 9.56633e5

VQSLOD
type: SiteQuality
SIO_000300: 3.89e0

QD
type: SiteQuality
SIO_000300: 1.557e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41670
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12518
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6102
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.394311210262131e-4
allele num: 7172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 498
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.62e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.076e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.83e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.899e1

VQSLOD
type: SiteQuality
SIO_000300: -1.381e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.51e-2

DP
type: SiteQuality
SIO_000300: 9.27529e5

GenotypeQuality
all individuals: 1103
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2021
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GenotypeQuality
all individuals: 259
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5762
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6724
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38912
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2122
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12196
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5068
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 464
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.422e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

QD
type: SiteQuality
SIO_000300: 3.67e0

VQSLOD
type: SiteQuality
SIO_000300: -3.368e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

FS
type: SiteQuality
SIO_000300: 3.332e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.84e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.001e0

DP
type: SiteQuality
SIO_000300: 9.01798e5

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7266
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7336
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9422
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.772483959020171e-5
allele num: 56418
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.96e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.128759e6

VQSLOD
type: SiteQuality
SIO_000300: -1.424e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -6.96e-1

QD
type: SiteQuality
SIO_000300: 5.97e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.855e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3185
bin: 9.75e1
variant carriers: 20

African
type: Population
allele count: 19
allele frequency: 2.266762109281794e-3
allele num: 8382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14730
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7332
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.062925170068027e-4
allele num: 9408
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4700
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

FS
type: SiteQuality
SIO_000300: 2.086e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

QD
type: SiteQuality
SIO_000300: 1.282e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.13111e6

VQSLOD
type: SiteQuality
SIO_000300: 3.18e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.898e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5478
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7458
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.754940156540662e-5
allele num: 56982
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.093e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

VQSLOD
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.193914e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 764
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.176747469992939e-4
allele num: 8498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56982
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4784
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9540
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

DP
type: SiteQuality
SIO_000300: 1.193914e6

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e0

FS
type: SiteQuality
SIO_000300: 2.093e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 9.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.1e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 801
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GenotypeQuality
all individuals: 4072
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9764
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14932
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.723662437948152e-5
allele num: 58016
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4864
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.347e1

MQRankSum
type: SiteQuality
SIO_000300: -1.63e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.355e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.985e-1

DP
type: SiteQuality
SIO_000300: 1.240298e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.53e-1

GenotypeQuality
all individuals: 2799
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1067
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3435
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4703
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27691
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3144
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 3137
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7720
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.11892980240931e-5
allele num: 58606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4954
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8744
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9916
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.332267519317879e-4
allele num: 15012
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 9.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.06e0

QD
type: SiteQuality
SIO_000300: 1.351e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

DP
type: SiteQuality
SIO_000300: 1.280803e6

GenotypeQuality
all individuals: 567
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1088
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1000
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27691
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8242
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8744
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.706309934136436e-5
allele num: 58606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9916
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4954
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15012
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.06e0

DP
type: SiteQuality
SIO_000300: 1.280803e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.19e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.351e1

VQSLOD
type: SiteQuality
SIO_000300: 4.13e0

MQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3