17-78199725-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78199725
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78199725
    reference: chr 17
allele count: 2
allele frequency: 1.650382888830209e-5
allele num: 121184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.593+10G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.593+10G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.593+10G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+10G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.593+10G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.335+10G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.593+10G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+5430G>A
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8770
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9380
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7168
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3836
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3362
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7009
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9686
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5190
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2511
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD

17-78199731-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78199731
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78199731
    reference: chr 17
allele count: 2
allele frequency: 1.651773178507128e-5
allele num: 121082
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.335+16T>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.593+16T>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.593+16T>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.593+16T>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.593+16T>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+5436T>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.593+16T>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+16T>A
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8766
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3570
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7008
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7103
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2511
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4295
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

17-78199731-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78199731
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78199731
    reference: chr 17
allele count: 2
allele frequency: 1.651773178507128e-5
allele num: 121082
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.335+16T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.593+16T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+5436T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.593+16T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.593+16T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.593+16T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.593+16T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+16T>C
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3570
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7008
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8766
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5175
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13804
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6735
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

17-78199733-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78199733
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78199733
    reference: chr 17
allele count: 1
allele frequency: 8.261185645363822e-6
allele num: 121048
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.593+18C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+5438C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.593+18C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.593+18C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.593+18C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+18C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.335+18C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.593+18C>T
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8769
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9371
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7011
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9651
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

17-78199734-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78199734
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78199734
    reference: chr 17
allele count: 1
allele frequency: 8.262004692818665e-6
allele num: 121036
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.593+19C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.593+19C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.593+19C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.593+19C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.593+19C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.335+19C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+5439C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+19C>G
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7020
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7010
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8766
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9369
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3363
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3361
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6695
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ

17-78199734-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78199734
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78199734
    reference: chr 17
allele count: 1
allele frequency: 8.262004692818665e-6
allele num: 121036
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.335+19C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.593+19C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.593+19C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.593+19C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.593+19C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+5439C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.593+19C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+19C>T
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3361
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8766
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7020
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9369
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3363
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7010
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13483
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4877
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4295
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

17-78199736-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78199736
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78199736
    reference: chr 17
allele count: 2
allele frequency: 1.652947204866277e-5
allele num: 120996
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.593+21C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+5441C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+21C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.593+21C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.593+21C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.593+21C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.593+21C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.335+21C>G
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3359
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8769
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6964
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7009
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9620
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5161
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4871
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP

17-78199736-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78199736
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78199736
    reference: chr 17
allele count: 1
allele frequency: 8.264736024331383e-6
allele num: 120996
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.593+21C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.593+21C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+21C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.593+21C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.335+21C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.593+21C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.593+21C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+5441C>T
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8769
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9620
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7009
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3359
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6964
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2981
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4294
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

17-78199740-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78199740
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78199740
    reference: chr 17
allele count: 1
allele frequency: 8.267879288962381e-6
allele num: 120950
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.593+25C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.593+25C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+25C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.593+25C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.593+25C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+5445C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.593+25C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.335+25C>G
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8761
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7002
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9360
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9570
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3359
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2990
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5145
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4870
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum

17-78199745-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78199745
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78199745
    reference: chr 17
allele count: 4
allele frequency: 3.308683640213741e-5
allele num: 120894
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.593+30A>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.593+30A>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+5450A>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.593+30A>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.593+30A>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.335+30A>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+30A>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.593+30A>G
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6613
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2713
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3357
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7001
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9334
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6570
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5134
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4864
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4292
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD

17-78199747-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78199747
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78199747
    reference: chr 17
allele count: 7
allele frequency: 5.791154425269289e-5
allele num: 120874
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.335+32G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+32G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.593+32G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.593+32G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.593+32G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.593+32G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+5452G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.593+32G>A
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5186
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6517
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6999
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9325
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9421
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5134
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19230
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2507
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

17-78199754-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78199754
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78199754
    reference: chr 17
allele count: 1
allele frequency: 8.283219853221344e-6
allele num: 120726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.593+39C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.593+39C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+39C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.593+39C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+5459C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.335+39C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.593+39C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.593+39C>T
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8732
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5182
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6994
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9067
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5837
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9231
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2502
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10399
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5094
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1207
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP

17-78199754-CCTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78199754
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78199751
    reference: chr 17
allele count: 10
allele frequency: 8.283219853221344e-5
allele num: 120726
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.593+44_593+46delTTC
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.593+44_593+46delTTC
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.335+44_335+46delTTC
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.593+44_593+46delTTC
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.593+44_593+46delTTC
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.593+44_593+46delTTC
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+5464_59+5466delTTC
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+44_402+46delTTC
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5837
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9231
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9067
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8732
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6994
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1207
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6359
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2928
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: CCTT
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

17-78199757-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78199757
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78199757
    reference: chr 17
allele count: 1
allele frequency: 8.287201246395068e-6
allele num: 120668
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.593+42T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.593+42T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.335+42T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.593+42T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.593+42T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+42T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+5462T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.593+42T>C
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8898
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6993
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2351
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8725
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5640
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9189
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1139
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2499
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5079
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1229
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

17-78199757-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78199757
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78199757
    reference: chr 17
allele count: 1
allele frequency: 8.287201246395068e-6
allele num: 120668
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.593+42T>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.593+42T>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.593+42T>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.335+42T>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.593+42T>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.593+42T>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+42T>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+5462T>G
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2351
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8898
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8725
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5640
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6993
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4283
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5079
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2923
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4839
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

17-78199759-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78199759
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78199759
    reference: chr 17
allele count: 1
allele frequency: 8.290499088045101e-6
allele num: 120620
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.593+44T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.593+44T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.593+44T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+44T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+5464T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.593+44T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.593+44T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.335+44T>C
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2810
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5396
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8718
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5180
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8713
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6991
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4282
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2898
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1251
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6180
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/17-78199761-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78199761
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78199761
    reference: chr 17
allele count: 2
allele frequency: 1.659310390601666e-5
allele num: 120532
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+5466C>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+46C>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.593+46C>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.593+46C>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.593+46C>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.593+46C>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.335+46C>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.593+46C>A
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8483
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8690
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9086
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6988
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3351
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1507
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1218
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8882
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5048
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1325
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/17-78199766-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78199766
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78199766
    reference: chr 17
allele count: 1
allele frequency: 8.326256015719971e-6
allele num: 120102
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.593+51C>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+5471C>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.593+51C>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.593+51C>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+51C>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.335+51C>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.593+51C>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.593+51C>A
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6961
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8761
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5628
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2813
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4079
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5169
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7707
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19195
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2485
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4254
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4758
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4469
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4543
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 813
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

17-78199767-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78199767
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78199767
    reference: chr 17
allele count: 1
allele frequency: 8.325285557294615e-6
allele num: 120116
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+5472C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.593+52C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.593+52C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.593+52C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.593+52C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+52C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.593+52C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.335+52C>G
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3353
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7730
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2814
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5630
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6959
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4053
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19196
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1331
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1787
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2782
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

17-78201578-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201578
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201578
    reference: chr 17
allele count: 1
allele frequency: 8.351707088928977e-6
allele num: 119736
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.594-39G>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.594-39G>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7283G>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.336-39G>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.594-39G>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.594-39G>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1863G>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.594-39G>T
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8216
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1312
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4741
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

17-78201580-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201580
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201580
    reference: chr 17
allele count: 2
allele frequency: 1.67022982362373e-5
allele num: 119744
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.594-37C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7285C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.336-37C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.594-37C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.594-37C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.594-37C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.594-37C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1865C>T
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14197
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8371
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 842
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1322
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2570
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4742
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

17-78201581-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201581
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201581
    reference: chr 17
allele count: 242
allele frequency: 2.020033388981636e-3
allele num: 119800
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.594-36G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.594-36G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.594-36G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.594-36G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.336-36G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.594-36G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7286G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1866G>A
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 9.75e1
  variant carriers: 177
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 25984
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3363
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14221
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8621
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2253
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 4
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

17-78201581-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201581
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201581
    reference: chr 17
allele count: 771
allele frequency: 6.435726210350584e-3
allele num: 119800
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.336-36G>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.594-36G>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.594-36G>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.594-36G>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7286G>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1866G>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.594-36G>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.594-36G>T
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3363
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 25984
  bin: 2.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 9.75e1
  variant carriers: 655
genotype depth: GenotypeDepth
  all individuals: 8621
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 14221
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 8906
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 828
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2583
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36868
  bin: 6.25e1
  variant carriers: 1
num of homozygotes: 2
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

17-78201584-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201584
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201584
    reference: chr 17
allele count: 1
allele frequency: 8.344041519950603e-6
allele num: 119846
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.594-33C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.336-33C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.594-33C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.594-33C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7289C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.594-33C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.594-33C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1869C>G
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14500
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37837
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

17-78201585-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201585
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201584
    reference: chr 17
allele count: 1
allele frequency: 8.338197281747686e-6
allele num: 119930
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.336-29delG
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.594-29delG
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.594-29delG
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.594-29delG
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.594-29delG
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7293delG
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.594-29delG
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1873delG
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14519
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9180
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26521
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38090
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: TG
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

17-78201586-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201586
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201586
    reference: chr 17
allele count: 1
allele frequency: 8.337641114575865e-6
allele num: 119938
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.594-31G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7291G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.594-31G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.594-31G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.336-31G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.594-31G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.594-31G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1871G>A
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2314
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

17-78201592-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201592
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201592
    reference: chr 17
allele count: 1
allele frequency: 8.3301401129567e-6
allele num: 120046
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.594-25T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.594-25T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.594-25T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.336-25T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.594-25T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7297T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.594-25T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1877T>C
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9384
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14567
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26694
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38319
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3914
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1371
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2323
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-78201593-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201593
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201593
    reference: chr 17
allele count: 1
allele frequency: 8.328752519447637e-6
allele num: 120066
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.594-24G>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.594-24G>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.336-24G>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1878G>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.594-24G>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7298G>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.594-24G>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.594-24G>C
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26722
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2324
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3913
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

17-78201597-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201597
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201597
    reference: chr 17
allele count: 5
allele frequency: 4.160633747732454e-5
allele num: 120174
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.594-20A>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.336-20A>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1882A>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.594-20A>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7302A>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.594-20A>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.594-20A>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.594-20A>G
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3914
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2331
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9201
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ

17-78201609-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201609
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201609
    reference: chr 17
allele count: 1
allele frequency: 8.307441806370146e-6
allele num: 120374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7314G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.336-8G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1894G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.594-8G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.594-8G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.594-8G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.594-8G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.594-8G>A
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27011
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14650
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38758
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
hgvs: c.594-8G>A
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

17-78201609-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201609
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201609
    reference: chr 17
allele count: 2
allele frequency: 1.661488361274029e-5
allele num: 120374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.336-8G>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.594-8G>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1894G>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7314G>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.594-8G>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.594-8G>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.594-8G>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.594-8G>C
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14650
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27011
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1386
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2336
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2697
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 8.75e1
  variant carriers: 0
hgvs: c.594-8G>C
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP

17-78201626-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201626
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201626
    reference: chr 17
allele count: 2
allele frequency: 1.660881263598465e-5
allele num: 120418
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.603C>T
  hgvsp: ENST00000546047.2:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.603C>T
  hgvsp: ENST00000411502.3:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.603C>T
  hgvsp: ENST00000361193.3:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.603C>T
  hgvsp: ENST00000572725.1:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7331C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.345C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.603C>T
  hgvsp: ENST00000571176.1:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1911C>T
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2696
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9252
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp201Asp
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD

17-78201627-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201627
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201627
    reference: chr 17
allele count: 1
allele frequency: 8.302889405513118e-6
allele num: 120440
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7332G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.604G>A
  hgvsp: ENSP00000459470.1:p.Ala202Thr
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.604G>A
  hgvsp: ENSP00000458831.1:p.Ala202Thr
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.604G>A
  hgvsp: ENSP00000355384.3:p.Ala202Thr
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.604G>A
  hgvsp: ENSP00000403998.3:p.Ala202Thr
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.346G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.604G>A
  hgvsp: ENSP00000440724.2:p.Ala202Thr
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1912G>A
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27156
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14672
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9384
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38684
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1384
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala202Thr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP

17-78201629-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201629
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201629
    reference: chr 17
allele count: 6
allele frequency: 4.981154631643615e-5
allele num: 120454
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1914C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.606C>T
  hgvsp: ENST00000411502.3:c.606C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.606C>T
  hgvsp: ENST00000361193.3:c.606C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7334C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.606C>T
  hgvsp: ENST00000571176.1:c.606C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.348C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.606C>T
  hgvsp: ENST00000572725.1:c.606C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.606C>T
  hgvsp: ENST00000546047.2:c.606C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27177
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14679
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9389
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3440
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3909
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala202Ala
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

17-78201630-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201630
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201630
    reference: chr 17
allele count: 7
allele frequency: 5.811347070250884e-5
allele num: 120454
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.607G>A
  hgvsp: ENSP00000459470.1:p.Val203Ile
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1915G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.607G>A
  hgvsp: ENSP00000458831.1:p.Val203Ile
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.607G>A
  hgvsp: ENSP00000355384.3:p.Val203Ile
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.607G>A
  hgvsp: ENSP00000440724.2:p.Val203Ile
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7335G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.607G>A
  hgvsp: ENSP00000403998.3:p.Val203Ile
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.349G>A
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3438
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1383
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2345
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2698
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val203Ile
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

17-78201632-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201632
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201632
    reference: chr 17
allele count: 2
allele frequency: 1.66024704476026e-5
allele num: 120464
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.609C>G
  hgvsp: ENST00000411502.3:c.609C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.351C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.609C>G
  hgvsp: ENST00000572725.1:c.609C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7337C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1917C>G
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.609C>G
  hgvsp: ENST00000361193.3:c.609C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.609C>G
  hgvsp: ENST00000571176.1:c.609C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.609C>G
  hgvsp: ENST00000546047.2:c.609C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9390
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14678
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3439
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3903
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2701
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9269
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val203Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

17-78201633-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201633
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201633
    reference: chr 17
allele count: 1
allele frequency: 8.301924386072691e-6
allele num: 120454
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.610C>T
  hgvsp: ENST00000546047.2:c.610C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.610C>T
  hgvsp: ENST00000571176.1:c.610C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1918C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.610C>T
  hgvsp: ENST00000411502.3:c.610C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.610C>T
  hgvsp: ENST00000361193.3:c.610C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.352C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7338C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.610C>T
  hgvsp: ENST00000572725.1:c.610C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27204
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3440
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14673
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2351
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu204Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

17-78201639-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201639
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201639
    reference: chr 17
allele count: 2
allele frequency: 1.659999004000598e-5
allele num: 120482
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.358C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.616C>T
  hgvsp: ENST00000572725.1:c.616C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7344C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.616C>T
  hgvsp: ENST00000361193.3:c.616C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1924C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.616C>T
  hgvsp: ENST00000546047.2:c.616C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.616C>T
  hgvsp: ENST00000571176.1:c.616C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.616C>T
  hgvsp: ENST00000411502.3:c.616C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27242
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1377
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3902
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 9268
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu206Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

17-78201648-A-ATGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201648
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201651
    reference: chr 17
allele count: 1
allele frequency: 8.307717869901138e-6
allele num: 120370
alternate allele: ATGC
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.626_628dupTGC
  hgvsp: ENSP00000458831.1:p.Leu210dup
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7365_59+7367dupCTG
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.637_639dupCTG
  hgvsp: ENSP00000459470.1:p.Leu213dup
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.637_639dupCTG
  hgvsp: ENSP00000440724.2:p.Leu213dup
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1945_402+1947dupCTG
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.637_639dupCTG
  hgvsp: ENSP00000403998.3:p.Leu213dup
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.379_381dupCTG
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.10_12dupCTG
  hgvsp: ENSP00000458234.1:p.Leu4dup
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.637_639dupCTG
  hgvsp: ENSP00000355384.3:p.Leu213dup
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3443
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9335
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2686
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu213dup
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

17-78201648-ATGC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201648
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201645
    reference: chr 17
allele count: 5
allele frequency: 4.153858934950569e-5
allele num: 120370
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.637_639delCTG
  hgvsp: ENSP00000459470.1:p.Leu213del
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.637_639delCTG
  hgvsp: ENSP00000355384.3:p.Leu213del
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1945_402+1947delCTG
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.637_639delCTG
  hgvsp: ENSP00000403998.3:p.Leu213del
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7365_59+7367delCTG
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.379_381delCTG
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.637_639delCTG
  hgvsp: ENSP00000440724.2:p.Leu213del
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.626_628delTGC
  hgvsp: ENSP00000458831.1:p.Leu210del
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: coding_sequence_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9335
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27225
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14660
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3443
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9239
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu213del
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: ATGC
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

17-78201650-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201650
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201650
    reference: chr 17
allele count: 1
allele frequency: 8.313381218409152e-6
allele num: 120288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.627G>T
  hgvsp: ENSP00000440724.2:p.Met209Ile
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1935G>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7355G>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.627G>T
  hgvsp: ENSP00000355384.3:p.Met209Ile
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.627G>T
  hgvsp: ENSP00000459470.1:p.Met209Ile
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.627G>T
  hgvsp: ENSP00000403998.3:p.Met209Ile
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.369G>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458831
  ensembl transcript: ENST00000571176
  gene symbol: SLC26A11
  hgvsc: ENST00000571176.1:c.627G>T
  hgvsp: ENSP00000458831.1:p.Met209Ile
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14641
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27195
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9215
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1371
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Met209Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

17-78201657-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201657
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201656
    reference: chr 17
allele count: 2
allele frequency: 1.661267547138467e-5
allele num: 120390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.635delT
  hgvsp: ENSP00000459470.1:p.Leu212ArgfsTer4
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.8delT
  hgvsp: ENSP00000458234.1:p.Leu3ArgfsTer4
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.377delT
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1943delT
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.635delT
  hgvsp: ENSP00000355384.3:p.Leu212ArgfsTer4
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.635delT
  hgvsp: ENSP00000403998.3:p.Leu212ArgfsTer4
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.635delT
  hgvsp: ENSP00000440724.2:p.Leu212ArgfsTer4
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7363delT
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9381
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14634
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27223
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38864
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2676
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu212ArgfsTer4
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: CT
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

17-78201667-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201667
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201667
    reference: chr 17
allele count: 1
allele frequency: 8.311722853913159e-6
allele num: 120312
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.644T>C
  hgvsp: ENSP00000459470.1:p.Leu215Pro
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.644T>C
  hgvsp: ENSP00000403998.3:p.Leu215Pro
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.644T>C
  hgvsp: ENSP00000355384.3:p.Leu215Pro
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7372T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.386T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.644T>C
  hgvsp: ENSP00000440724.2:p.Leu215Pro
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1952T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.17T>C
  hgvsp: ENSP00000458234.1:p.Leu6Pro
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27161
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9215
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2666
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2331
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu215Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ

17-78201674-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201674
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201674
    reference: chr 17
allele count: 55
allele frequency: 4.574717615158119e-4
allele num: 120226
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1959G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.651G>A
  hgvsp: ENST00000411502.3:c.651G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.393G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.651G>A
  hgvsp: ENST00000572725.1:c.651G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.24G>A
  hgvsp: ENST00000571215.1:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.651G>A
  hgvsp: ENST00000546047.2:c.651G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.651G>A
  hgvsp: ENST00000361193.3:c.651G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7379G>A
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14604
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27107
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9258
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 9.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2326
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu217Leu
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/17-78201678-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201678
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201678
    reference: chr 17
allele count: 1
allele frequency: 8.324038157390913e-6
allele num: 120134
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1963C>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.655C>A
  hgvsp: ENST00000572725.1:c.655C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.655C>A
  hgvsp: ENST00000546047.2:c.655C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.28C>A
  hgvsp: ENST00000571215.1:c.28C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.397C>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7383C>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.655C>A
  hgvsp: ENST00000411502.3:c.655C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.655C>A
  hgvsp: ENST00000361193.3:c.655C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9194
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27084
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9171
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2661
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg219Arg
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

17-78201678-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201678
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201678
    reference: chr 17
allele count: 3
allele frequency: 2.497211447217274e-5
allele num: 120134
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.655C>T
  hgvsp: ENSP00000440724.2:p.Arg219Trp
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.397C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.655C>T
  hgvsp: ENSP00000355384.3:p.Arg219Trp
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7383C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.655C>T
  hgvsp: ENSP00000403998.3:p.Arg219Trp
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.28C>T
  hgvsp: ENSP00000458234.1:p.Arg10Trp
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1963C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.655C>T
  hgvsp: ENSP00000459470.1:p.Arg219Trp
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9194
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27084
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2661
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9171
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg219Trp
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

17-78201679-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201679
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201679
    reference: chr 17
allele count: 3
allele frequency: 2.49820961644155e-5
allele num: 120086
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7384G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.656G>A
  hgvsp: ENSP00000355384.3:p.Arg219Gln
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.656G>A
  hgvsp: ENSP00000403998.3:p.Arg219Gln
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.29G>A
  hgvsp: ENSP00000458234.1:p.Arg10Gln
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.398G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.656G>A
  hgvsp: ENSP00000440724.2:p.Arg219Gln
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1964G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.656G>A
  hgvsp: ENSP00000459470.1:p.Arg219Gln
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14594
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27056
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9203
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9166
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38565
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2318
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg219Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

17-78201686-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201686
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201686
    reference: chr 17
allele count: 2865
allele frequency: 2.388256281155699e-2
allele num: 119962
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.36C>T
  hgvsp: ENST00000571215.1:c.36C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.405C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.663C>T
  hgvsp: ENST00000411502.3:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7391C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1971C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.663C>T
  hgvsp: ENST00000546047.2:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.663C>T
  hgvsp: ENST00000572725.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.663C>T
  hgvsp: ENST00000361193.3:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14528
  bin: 3.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 8.25e1
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 4.25e1
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 1.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.25e1
  variant carriers: 140
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 3.75e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.75e1
  variant carriers: 158
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 5.25e1
  variant carriers: 122
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.75e1
  variant carriers: 178
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.25e1
  variant carriers: 166
genotype depth: GenotypeDepth
  all individuals: 9006
  bin: 2.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 4.75e1
  variant carriers: 117
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 164
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 9.75e1
  variant carriers: 781
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 201
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.75e1
  variant carriers: 155
genotype depth: GenotypeDepth
  all individuals: 26862
  bin: 2.75e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2282
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2598
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 38166
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 9.25e1
  variant carriers: 4
hgvs: p.His221His
num of homozygotes: 166
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum

17-78201687-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201687
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201687
    reference: chr 17
allele count: 81
allele frequency: 6.755066299724793e-4
allele num: 119910
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.37G>A
  hgvsp: ENSP00000458234.1:p.Val13Met
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1972G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.664G>A
  hgvsp: ENSP00000440724.2:p.Val222Met
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.406G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7392G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.664G>A
  hgvsp: ENSP00000403998.3:p.Val222Met
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.664G>A
  hgvsp: ENSP00000355384.3:p.Val222Met
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.664G>A
  hgvsp: ENSP00000459470.1:p.Val222Met
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9226
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28016
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.75e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39896
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1814
  bin: 9.75e1
  variant carriers: 82
genotype quality: GenotypeQuality
  all individuals: 9481
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val222Met
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum

17-78201689-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201689
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201689
    reference: chr 17
allele count: 1
allele frequency: 8.342231713828083e-6
allele num: 119872
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7394G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.666G>A
  hgvsp: ENST00000361193.3:c.666G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.666G>A
  hgvsp: ENST00000572725.1:c.666G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.408G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.39G>A
  hgvsp: ENST00000571215.1:c.39G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.666G>A
  hgvsp: ENST00000411502.3:c.666G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1974G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.666G>A
  hgvsp: ENST00000546047.2:c.666G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3570
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28053
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15231
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2734
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val222Val
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

17-78201689-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201689
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201689
    reference: chr 17
allele count: 1
allele frequency: 8.342231713828083e-6
allele num: 119872
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.666G>C
  hgvsp: ENST00000546047.2:c.666G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1974G>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.408G>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.666G>C
  hgvsp: ENST00000411502.3:c.666G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.666G>C
  hgvsp: ENST00000572725.1:c.666G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.666G>C
  hgvsp: ENST00000361193.3:c.666G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.39G>C
  hgvsp: ENST00000571215.1:c.39G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7394G>C
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3570
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15231
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28053
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1401
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val222Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ

17-78201691-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201691
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201691
    reference: chr 17
allele count: 3
allele frequency: 2.502920073418989e-5
allele num: 119860
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.41C>T
  hgvsp: ENSP00000458234.1:p.Pro14Leu
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1976C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7396C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.668C>T
  hgvsp: ENSP00000459470.1:p.Pro223Leu
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.668C>T
  hgvsp: ENSP00000355384.3:p.Pro223Leu
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.668C>T
  hgvsp: ENSP00000440724.2:p.Pro223Leu
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.668C>T
  hgvsp: ENSP00000403998.3:p.Pro223Leu
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.410C>T
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15230
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27994
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9203
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2394
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1078
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro223Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD

17-78201693-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201693
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201693
    reference: chr 17
allele count: 3
allele frequency: 2.506014434643144e-5
allele num: 119712
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.670C>T
  hgvsp: ENSP00000355384.3:p.Pro224Ser
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.670C>T
  hgvsp: ENSP00000403998.3:p.Pro224Ser
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.670C>T
  hgvsp: ENSP00000459470.1:p.Pro224Ser
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7398C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.670C>T
  hgvsp: ENSP00000440724.2:p.Pro224Ser
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.412C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.43C>T
  hgvsp: ENSP00000458234.1:p.Pro15Ser
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1978C>T
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9098
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3568
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39520
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro224Ser
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD

17-78201695-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201695
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201695
    reference: chr 17
allele count: 8
allele frequency: 6.68471539824192e-5
allele num: 119676
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.672C>T
  hgvsp: ENST00000411502.3:c.672C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.672C>T
  hgvsp: ENST00000361193.3:c.672C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7400C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.414C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.672C>T
  hgvsp: ENST00000572725.1:c.672C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.672C>T
  hgvsp: ENST00000546047.2:c.672C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.45C>T
  hgvsp: ENST00000571215.1:c.45C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1980C>T
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9125
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3559
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1175
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2713
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro224Pro
num of homozygotes: 1
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-78201702-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201702
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201702
    reference: chr 17
allele count: 1
allele frequency: 8.368480953337351e-6
allele num: 119496
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1987C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7407C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.679C>T
  hgvsp: ENSP00000355384.3:p.Pro227Ser
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.679C>T
  hgvsp: ENSP00000403998.3:p.Pro227Ser
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.679C>T
  hgvsp: ENSP00000459470.1:p.Pro227Ser
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.421C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.52C>T
  hgvsp: ENSP00000458234.1:p.Pro18Ser
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.679C>T
  hgvsp: ENSP00000440724.2:p.Pro227Ser
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9141
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1332
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9360
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1674
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Pro227Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

17-78201704-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201704
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201704
    reference: chr 17
allele count: 2
allele frequency: 1.674088458834165e-5
allele num: 119468
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.681C>T
  hgvsp: ENST00000361193.3:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.423C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1989C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7409C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.681C>T
  hgvsp: ENST00000411502.3:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.54C>T
  hgvsp: ENST00000571215.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.681C>T
  hgvsp: ENST00000546047.2:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.681C>T
  hgvsp: ENST00000572725.1:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15104
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27788
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1368
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2690
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1666
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9354
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro227Pro
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/17-78201711-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201711
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201711
    reference: chr 17
allele count: 1
allele frequency: 8.38321345338095e-6
allele num: 119286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.688C>A
  hgvsp: ENSP00000459470.1:p.Pro230Thr
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7416C>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1996C>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.61C>A
  hgvsp: ENSP00000458234.1:p.Pro21Thr
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.688C>A
  hgvsp: ENSP00000403998.3:p.Pro230Thr
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.688C>A
  hgvsp: ENSP00000355384.3:p.Pro230Thr
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.430C>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.688C>A
  hgvsp: ENSP00000440724.2:p.Pro230Thr
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9139
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15003
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27680
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1561
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1351
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2336
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro230Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

17-78201712-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201712
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201712
    reference: chr 17
allele count: 1
allele frequency: 8.385603595746822e-6
allele num: 119252
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.689C>T
  hgvsp: ENSP00000459470.1:p.Pro230Leu
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.689C>T
  hgvsp: ENSP00000403998.3:p.Pro230Leu
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+1997C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.689C>T
  hgvsp: ENSP00000355384.3:p.Pro230Leu
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7417C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.689C>T
  hgvsp: ENSP00000440724.2:p.Pro230Leu
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.431C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.62C>T
  hgvsp: ENSP00000458234.1:p.Pro21Leu
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14987
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9095
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9294
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1350
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2667
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1614
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro230Leu
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

17-78201723-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201723
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201723
    reference: chr 17
allele count: 2
allele frequency: 1.685516357936254e-5
allele num: 118658
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7428C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.73C>T
  hgvsp: ENSP00000458234.1:p.Arg25Trp
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.700C>T
  hgvsp: ENSP00000355384.3:p.Arg234Trp
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.700C>T
  hgvsp: ENSP00000440724.2:p.Arg234Trp
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.700C>T
  hgvsp: ENSP00000403998.3:p.Arg234Trp
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.700C>T
  hgvsp: ENSP00000459470.1:p.Arg234Trp
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+2008C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.442C>T
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8977
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14655
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27049
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9069
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38223
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1324
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg234Trp
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

17-78201724-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201724
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201724
    reference: chr 17
allele count: 2
allele frequency: 1.685630004214075e-5
allele num: 118650
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.701G>A
  hgvsp: ENSP00000459470.1:p.Arg234Gln
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.701G>A
  hgvsp: ENSP00000440724.2:p.Arg234Gln
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.701G>A
  hgvsp: ENSP00000403998.3:p.Arg234Gln
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7429G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.74G>A
  hgvsp: ENSP00000458234.1:p.Arg25Gln
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.443G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.701G>A
  hgvsp: ENSP00000355384.3:p.Arg234Gln
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+2009G>A
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27090
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14613
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3386
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2161
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1323
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg234Gln
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

17-78201726-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201726
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201726
    reference: chr 17
allele count: 1
allele frequency: 8.43497477942541e-6
allele num: 118554
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.703C>T
  hgvsp: ENSP00000355384.3:p.Leu235Phe
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7431C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.445C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+2011C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.703C>T
  hgvsp: ENSP00000440724.2:p.Leu235Phe
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.703C>T
  hgvsp: ENSP00000403998.3:p.Leu235Phe
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.703C>T
  hgvsp: ENSP00000459470.1:p.Leu235Phe
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.76C>T
  hgvsp: ENSP00000458234.1:p.Leu26Phe
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27024
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3359
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38268
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1623
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Leu235Phe
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: C
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

17-78201732-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201732
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201732
    reference: chr 17
allele count: 1
allele frequency: 8.459664320519762e-6
allele num: 118208
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7437C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.709C>T
  hgvsp: ENSP00000459470.1:p.Arg237Cys
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.82C>T
  hgvsp: ENSP00000458234.1:p.Arg28Cys
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.709C>T
  hgvsp: ENSP00000440724.2:p.Arg237Cys
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+2017C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.709C>T
  hgvsp: ENSP00000403998.3:p.Arg237Cys
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.451C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.709C>T
  hgvsp: ENSP00000355384.3:p.Arg237Cys
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26758
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3275
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1608
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2538
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1292
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg237Cys
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

17-78201733-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201733
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201733
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 118168
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.710G>A
  hgvsp: ENSP00000403998.3:p.Arg237His
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.83G>A
  hgvsp: ENSP00000458234.1:p.Arg28His
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.710G>A
  hgvsp: ENSP00000355384.3:p.Arg237His
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+2018G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.452G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.710G>A
  hgvsp: ENSP00000459470.1:p.Arg237His
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7438G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.710G>A
  hgvsp: ENSP00000440724.2:p.Arg237His
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9168
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3267
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2520
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1603
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1273
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg237His
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

17-78201734-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201734
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201734
    reference: chr 17
allele count: 15
allele frequency: 1.276508833441127e-4
allele num: 117508
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.84T>C
  hgvsp: ENST00000571215.1:c.84T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.453T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.711T>C
  hgvsp: ENST00000411502.3:c.711T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.711T>C
  hgvsp: ENST00000361193.3:c.711T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7439T>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.711T>C
  hgvsp: ENST00000572725.1:c.711T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.711T>C
  hgvsp: ENST00000546047.2:c.711T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+2019T>C
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3135
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26224
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9290
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2846
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 837
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1152
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2223
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg237Arg
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

17-78201740-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201740
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201740
    reference: chr 17
allele count: 1
allele frequency: 8.498198381943028e-6
allele num: 117672
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.459G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.717G>A
  hgvsp: ENST00000411502.3:c.717G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7445G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.717G>A
  hgvsp: ENST00000361193.3:c.717G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.90G>A
  hgvsp: ENST00000571215.1:c.90G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.717G>A
  hgvsp: ENST00000572725.1:c.717G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.717G>A
  hgvsp: ENST00000546047.2:c.717G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+2025G>A
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26465
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13240
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9701
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1890
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2176
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu239Leu
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

17-78201746-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201746
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201746
    reference: chr 17
allele count: 1
allele frequency: 8.522533578782301e-6
allele num: 117336
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.465G>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.96G>C
  hgvsp: ENSP00000458234.1:p.Trp32Cys
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.723G>C
  hgvsp: ENSP00000459470.1:p.Trp241Cys
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+2031G>C
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.723G>C
  hgvsp: ENSP00000440724.2:p.Trp241Cys
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.723G>C
  hgvsp: ENSP00000403998.3:p.Trp241Cys
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.723G>C
  hgvsp: ENSP00000355384.3:p.Trp241Cys
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7451G>C
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9598
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12799
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37288
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2112
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7861
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Trp241Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

17-78201750-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201750
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201750
    reference: chr 17
allele count: 2
allele frequency: 1.710249525405757e-5
allele num: 116942
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.469G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.727G>A
  hgvsp: ENSP00000355384.3:p.Ala243Thr
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.100G>A
  hgvsp: ENSP00000458234.1:p.Ala34Thr
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7455G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.727G>A
  hgvsp: ENSP00000440724.2:p.Ala243Thr
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.727G>A
  hgvsp: ENSP00000459470.1:p.Ala243Thr
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.727G>A
  hgvsp: ENSP00000403998.3:p.Ala243Thr
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+2035G>A
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25065
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4653
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1563
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4799
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2034
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1076
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala243Thr
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

17-78201752-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201752
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201752
    reference: chr 17
allele count: 3
allele frequency: 2.567745690466816e-5
allele num: 116834
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.729C>T
  hgvsp: ENST00000546047.2:c.729C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.729C>T
  hgvsp: ENST00000411502.3:c.729C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.102C>T
  hgvsp: ENST00000571215.1:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.729C>T
  hgvsp: ENST00000361193.3:c.729C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.729C>T
  hgvsp: ENST00000572725.1:c.729C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7457C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.471C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+2037C>T
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9491
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12086
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24830
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2788
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1337
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1301
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala243Ala
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

17-78201754-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201754
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201754
    reference: chr 17
allele count: 3
allele frequency: 2.571751877378871e-5
allele num: 116652
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7459C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.731C>T
  hgvsp: ENSP00000403998.3:p.Thr244Met
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.731C>T
  hgvsp: ENSP00000459470.1:p.Thr244Met
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.731C>T
  hgvsp: ENSP00000440724.2:p.Thr244Met
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.104C>T
  hgvsp: ENSP00000458234.1:p.Thr35Met
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+2039C>T
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.731C>T
  hgvsp: ENSP00000355384.3:p.Thr244Met
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.473C>T
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 11787
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2257
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9433
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1640
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7300
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr244Met
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS

17-78201755-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201755
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201755
    reference: chr 17
allele count: 2
allele frequency: 1.717298346241693e-5
allele num: 116462
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.732G>A
  hgvsp: ENST00000572725.1:c.732G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.105G>A
  hgvsp: ENST00000571215.1:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.732G>A
  hgvsp: ENST00000411502.3:c.732G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.474G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.732G>A
  hgvsp: ENST00000361193.3:c.732G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7460G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.732G>A
  hgvsp: ENST00000546047.2:c.732G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+2040G>A
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2713
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11463
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6008
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9353
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1625
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1803
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34226
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5937
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr244Thr
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD

17-78201759-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 78201759
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 78201759
    reference: chr 17
allele count: 1
allele frequency: 8.611780916293489e-6
allele num: 116120
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000403998
  ensembl transcript: ENST00000411502
  gene symbol: SLC26A11
  hgvsc: ENST00000411502.3:c.736G>A
  hgvsp: ENSP00000403998.3:p.Ala246Thr
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000440724
  ensembl transcript: ENST00000546047
  gene symbol: SLC26A11
  hgvsc: ENST00000546047.2:c.736G>A
  hgvsp: ENSP00000440724.2:p.Ala246Thr
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000459470
  ensembl transcript: ENST00000572725
  gene symbol: SLC26A11
  hgvsc: ENST00000572725.1:c.736G>A
  hgvsp: ENSP00000459470.1:p.Ala246Thr
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000355384
  ensembl transcript: ENST00000361193
  gene symbol: SLC26A11
  hgvsc: ENST00000361193.3:c.736G>A
  hgvsp: ENSP00000355384.3:p.Ala246Thr
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571564
  gene symbol: SLC26A11
  hgvsc: ENST00000571564.1:n.402+2044G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000181045
  ensembl protein: ENSP00000458234
  ensembl transcript: ENST00000571215
  gene symbol: SLC26A11
  hgvsc: ENST00000571215.1:c.109G>A
  hgvsp: ENSP00000458234.1:p.Ala37Thr
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571072
  gene symbol: SLC26A11
  hgvsc: ENST00000571072.1:n.478G>A
  variant of: http://identifiers.org/hgnc/14471
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000181045
  ensembl transcript: ENST00000571888
  gene symbol: SLC26A11
  hgvsc: ENST00000571888.1:n.59+7464G>A
  variant of: http://identifiers.org/hgnc/14471
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6865
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22532
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala246Thr
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 3003
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19261
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4884
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14117
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5190
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6790
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728907330567082e-4
allele num: 11568
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.014e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.520765e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.9e0

FS
type: SiteQuality
SIO_000300: 2.74e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

QD
type: SiteQuality
SIO_000300: 2.924e1

GenotypeQuality
all individuals: 170
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13804
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6735
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4878
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5175
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2990
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19247
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.221001221001221e-4
allele num: 16380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.91e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.0e-1

DP
type: SiteQuality
SIO_000300: 2.515969e6

VQSLOD
type: SiteQuality
SIO_000300: 6.38e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.88e-1

FS
type: SiteQuality
SIO_000300: 6.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.174e1

GenotypeQuality
all individuals: 19247
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4878
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2990
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2511
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00336376741951e-5
allele num: 66592
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 6.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.38e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e0

QD
type: SiteQuality
SIO_000300: 1.174e1

DP
type: SiteQuality
SIO_000300: 2.515969e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.91e0

GenotypeQuality
all individuals: 2987
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19246
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 574
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13599
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5169
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4877
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2511
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6701
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.113216774666829e-5
allele num: 16358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.513881e6

VQSLOD
type: SiteQuality
SIO_000300: -2.547e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 5.268e0

MQRankSum
type: SiteQuality
SIO_000300: -1.031e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.204e0

QD
type: SiteQuality
SIO_000300: 2.818e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e0

GenotypeQuality
all individuals: 226
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2512
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13483
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4295
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19247
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5165
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2984
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4877
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.116956202593589e-5
allele num: 16348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66592
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.465e0

QD
type: SiteQuality
SIO_000300: 6.57e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.505e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

MQRankSum
type: SiteQuality
SIO_000300: -1.863e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

DP
type: SiteQuality
SIO_000300: 2.512645e6

MQ
type: SiteQuality
SIO_000300: 5.855e1

GenotypeQuality
all individuals: 5165
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6695
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19247
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2512
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2984
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.116956202593589e-5
allele num: 16348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66592
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.863e0

QD
type: SiteQuality
SIO_000300: 6.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

DP
type: SiteQuality
SIO_000300: 2.512645e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 2.465e0

MQ
type: SiteQuality
SIO_000300: 5.855e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.505e0

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4294
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2981
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6673
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13285
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2513
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19242
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.004356316659156e-5
allele num: 66570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.62e-1

FS
type: SiteQuality
SIO_000300: 6.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.31e-1

MQ
type: SiteQuality
SIO_000300: 5.946e1

QD
type: SiteQuality
SIO_000300: 1.301e1

DP
type: SiteQuality
SIO_000300: 2.510194e6

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2513
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5161
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13285
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19242
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4871
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6673
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502178158329578e-5
allele num: 66570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.29e-1

DP
type: SiteQuality
SIO_000300: 2.510194e6

VQSLOD
type: SiteQuality
SIO_000300: 7.7e-1

MQ
type: SiteQuality
SIO_000300: 5.946e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.26e-1

QD
type: SiteQuality
SIO_000300: 1.301e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.62e-1

GenotypeQuality
all individuals: 341
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19234
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12923
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4293
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6636
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2511
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2977
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16322
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66548
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.549e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.889e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.053e0

MQRankSum
type: SiteQuality
SIO_000300: 4.9e-2

DP
type: SiteQuality
SIO_000300: 2.504866e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.5e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.597e0

GenotypeQuality
all individuals: 2965
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2509
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.454590083456063e-4
allele num: 16296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.497104e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.07e0

FS
type: SiteQuality
SIO_000300: 3.819e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

QD
type: SiteQuality
SIO_000300: 1.542e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.26e-1

GenotypeQuality
all individuals: 466
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4861
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12045
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 82
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variant carriers: 0

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 79
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variant carriers: 0

GenotypeQuality
all individuals: 507
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variant carriers: 0

GenotypeQuality
all individuals: 2955
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4289
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66520
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.747638326585695e-4
allele num: 10374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.13e-1

DP
type: SiteQuality
SIO_000300: 2.493856e6

MQ
type: SiteQuality
SIO_000300: 5.91e1

FS
type: SiteQuality
SIO_000300: 1.627e0

MQRankSum
type: SiteQuality
SIO_000300: 5.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.350000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.03e-1

QD
type: SiteQuality
SIO_000300: 1.347e1

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2928
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4845
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 968
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6359
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variant carriers: 0

GenotypeQuality
all individuals: 1060
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4285
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
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variant carriers: 0

GenotypeQuality
all individuals: 150
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variant carriers: 0

GenotypeQuality
all individuals: 19232
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160362032954282e-4
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66460
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.395e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.51e0

MQ
type: SiteQuality
SIO_000300: 5.639e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 2.285e0

QD
type: SiteQuality
SIO_000300: 1.785e1

DP
type: SiteQuality
SIO_000300: 2.476484e6

GenotypeQuality
all individuals: 968
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5094
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19232
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4285
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1060
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4845
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10399
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2502
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.641342074816814e-5
allele num: 10372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.354198013842913e-4
allele num: 66460
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16220
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.285e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.61e-1

DP
type: SiteQuality
SIO_000300: 2.476484e6

MQ
type: SiteQuality
SIO_000300: 5.639e1

VQSLOD
type: SiteQuality
SIO_000300: 2.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.395e0

QD
type: SiteQuality
SIO_000300: 1.785e1

GenotypeQuality
all individuals: 2923
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4283
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6310
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10040
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 19219
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1142
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4839
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variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16204
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505343971097396e-5
allele num: 66430
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.614e1

MQRankSum
type: SiteQuality
SIO_000300: -4.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.4e-2

DP
type: SiteQuality
SIO_000300: 2.47107e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

FS
type: SiteQuality
SIO_000300: 3.952e0

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.17e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

GenotypeQuality
all individuals: 2499
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1142
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1139
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 7.5e0
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GenotypeQuality
all individuals: 6310
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 769
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variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10040
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19219
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1229
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66430
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.645061728395061e-5
allele num: 10368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16204
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.952e1

MQRankSum
type: SiteQuality
SIO_000300: -4.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.4e-2

FS
type: SiteQuality
SIO_000300: 3.952e0

QD
type: SiteQuality
SIO_000300: 1.614e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

DP
type: SiteQuality
SIO_000300: 2.47107e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.17e0

GenotypeQuality
all individuals: 60
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
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GenotypeQuality
all individuals: 550
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variant carriers: 0

GenotypeQuality
all individuals: 2492
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variant carriers: 0

GenotypeQuality
all individuals: 9534
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16168
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160631383472609e-4
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66422
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e0

MQ
type: SiteQuality
SIO_000300: 5.855e1

QD
type: SiteQuality
SIO_000300: 6.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e0

VQSLOD
type: SiteQuality
SIO_000300: -2.597e0

DP
type: SiteQuality
SIO_000300: 2.466534e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 7.204e0

MQRankSum
type: SiteQuality
SIO_000300: -2.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.345e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4817
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 892
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19217
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 79
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2874
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variant carriers: 0

GenotypeQuality
all individuals: 6046
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4279
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2491
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.733102253032929e-4
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66380
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16136
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.15e-1

QD
type: SiteQuality
SIO_000300: 9.18e0

DP
type: SiteQuality
SIO_000300: 2.461405e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.139999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.931e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1790
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1628
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.279829188646068e-5
allele num: 15924
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.683e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.457e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.51e-1

FS
type: SiteQuality
SIO_000300: 8.563000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

DP
type: SiteQuality
SIO_000300: 2.446849e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.02e0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
all individuals: 296
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15956
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509844184080203e-5
allele num: 66232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.471e1

FS
type: SiteQuality
SIO_000300: 2.122e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: -6.32e-1

DP
type: SiteQuality
SIO_000300: 2.447068e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.18e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.833e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 397
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GenotypeQuality
all individuals: 36328
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16064
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518372304889159e-5
allele num: 65860
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.383e0

QD
type: SiteQuality
SIO_000300: 9.119999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: 3.72e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 1.962943e6

GenotypeQuality
all individuals: 575
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
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variant carriers: 0

GenotypeQuality
all individuals: 337
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 8858
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 47
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variant carriers: 0

GenotypeQuality
all individuals: 2244
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16070
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.734304543877905e-4
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65868
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.637e0

QD
type: SiteQuality
SIO_000300: 1.199e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.58e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.7e0

DP
type: SiteQuality
SIO_000300: 1.96661e6

VQSLOD
type: SiteQuality
SIO_000300: -1.018e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.97e1

GenotypeQuality
all individuals: 457
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2583
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 235

GenotypeQuality
all individuals: 8906
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1325
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.108297659167502e-5
allele num: 65874
num of homozygotes: 0

African
type: Population
allele count: 220
allele frequency: 2.148017965241164e-2
allele num: 10242
num of homozygotes: 4

Other
type: Population
allele count: 1
allele frequency: 1.118568232662192e-3
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

Latino
type: Population
allele count: 14
allele frequency: 1.213802670365875e-3
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.207324643078833e-5
allele num: 16110
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.254e1

VQSLOD
type: SiteQuality
SIO_000300: 6.04e0

DP
type: SiteQuality
SIO_000300: 1.993368e6

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 767

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2253
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 20
allele frequency: 3.02571860816944e-3
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 21
allele frequency: 2.050380785002929e-3
allele num: 10242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

Latino
type: Population
allele count: 31
allele frequency: 2.687705912953009e-3
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.118568232662192e-3
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 697
allele frequency: 1.058080578073291e-2
allele num: 65874
num of homozygotes: 2

South Asian
type: Population
allele count: 1
allele frequency: 6.207324643078833e-5
allele num: 16110
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.95e-1

DP
type: SiteQuality
SIO_000300: 1.993368e6

VQSLOD
type: SiteQuality
SIO_000300: 6.04e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

QD
type: SiteQuality
SIO_000300: 1.254e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.5e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 573
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GenotypeQuality
all individuals: 142
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16138
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517680983457277e-5
allele num: 65890
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.107e0

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

QD
type: SiteQuality
SIO_000300: 1.063e1

MQRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.867332e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.6e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9126
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.177415369409439e-5
allele num: 16188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10236
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65914
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.71e0

DP
type: SiteQuality
SIO_000300: 1.869057e6

MQ
type: SiteQuality
SIO_000300: 6.039e1

QD
type: SiteQuality
SIO_000300: 1.245e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.355e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

GenotypeQuality
all individuals: 109
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 576
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GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517036317849449e-5
allele num: 65918
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10234
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16194
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.153e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

QD
type: SiteQuality
SIO_000300: 1.164e1

FS
type: SiteQuality
SIO_000300: 2.301e0

MQRankSum
type: SiteQuality
SIO_000300: 8.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.06e-1

DP
type: SiteQuality
SIO_000300: 1.870198e6

GenotypeQuality
all individuals: 85
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 5.25e1
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GenotypeQuality
all individuals: 578
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516116316443798e-5
allele num: 65958
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16252
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.874186e6

MQ
type: SiteQuality
SIO_000300: 5.857e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.15e-1

QD
type: SiteQuality
SIO_000300: 9.91e0

FS
type: SiteQuality
SIO_000300: 1.781e0

VQSLOD
type: SiteQuality
SIO_000300: -1.592e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.070000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.51e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516024377671993e-5
allele num: 65962
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10236
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.7957e1

MQRankSum
type: SiteQuality
SIO_000300: -9.99e-1

QD
type: SiteQuality
SIO_000300: 1.006e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQ
type: SiteQuality
SIO_000300: 5.799e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e-1

DP
type: SiteQuality
SIO_000300: 1.874963e6

VQSLOD
type: SiteQuality
SIO_000300: -2.654e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.0e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 5
allele frequency: 4.883766360617308e-4
allele num: 10238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65992
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.8778e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.245e0

VQSLOD
type: SiteQuality
SIO_000300: 3.97e0

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-2

QD
type: SiteQuality
SIO_000300: 1.285e1

FS
type: SiteQuality
SIO_000300: 1.107e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.49e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513683700653911e-5
allele num: 66064
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.37e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 7.18e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.912e0

DP
type: SiteQuality
SIO_000300: 1.882165e6

FS
type: SiteQuality
SIO_000300: 6.162e0

MQRankSum
type: SiteQuality
SIO_000300: -1.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3911
bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66064
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.214771622934888e-4
allele num: 16464
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.162e0

MQRankSum
type: SiteQuality
SIO_000300: -1.39e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.37e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.912e0

DP
type: SiteQuality
SIO_000300: 1.882165e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.026542780182198e-5
allele num: 66082
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-2

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.883928e6

QD
type: SiteQuality
SIO_000300: 1.098e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.44e-1

FS
type: SiteQuality
SIO_000300: 5.018e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.759906304899473e-5
allele num: 10246
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66104
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.08e-1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 1.646e0

QD
type: SiteQuality
SIO_000300: 1.13e1

VQSLOD
type: SiteQuality
SIO_000300: 7.04e-1

DP
type: SiteQuality
SIO_000300: 1.883992e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
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allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.879953152449736e-4
allele num: 10246
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66120
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
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Latino
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allele count: 1
allele frequency: 8.665511265164645e-5
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-2

QD
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
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SIO_000300: 1.884146e6

MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 556
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.733102253032929e-4
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.024986387561256e-5
allele num: 66116
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
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allele count: 3
allele frequency: 1.818622696411251e-4
allele num: 16496
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

FS
type: SiteQuality
SIO_000300: 5.28e-1

DP
type: SiteQuality
SIO_000300: 1.883938e6

VQSLOD
type: SiteQuality
SIO_000300: 2.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.2e-2

MQ
type: SiteQuality
SIO_000300: 5.953e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.171e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.151e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66126
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.95160031225605e-4
allele num: 10248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.883495e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.304e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.19e0

FS
type: SiteQuality
SIO_000300: 3.378e0

VQSLOD
type: SiteQuality
SIO_000300: 2.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.46e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.761811792268645e-5
allele num: 10244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66120
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.08e-1

QD
type: SiteQuality
SIO_000300: 1.059e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.638e0

FS
type: SiteQuality
SIO_000300: 5.17e0

MQRankSum
type: SiteQuality
SIO_000300: 7.92e-1

DP
type: SiteQuality
SIO_000300: 1.883246e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.982e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.023523009010099e-5
allele num: 66148
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.396e0

FS
type: SiteQuality
SIO_000300: 8.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.237e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

DP
type: SiteQuality
SIO_000300: 1.883531e6

VQSLOD
type: SiteQuality
SIO_000300: 1.25e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66108
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.100000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.013e0

MQ
type: SiteQuality
SIO_000300: 5.92e1

FS
type: SiteQuality
SIO_000300: 9.856e0

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

DP
type: SiteQuality
SIO_000300: 1.884256e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.86e-1

QD
type: SiteQuality
SIO_000300: 3.67e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.02535245356084e-5
allele num: 66108
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.819725827975252e-4
allele num: 16486
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -8.100000000000001e-1

QD
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.92e1

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.86e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66080
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.070908207867897e-5
allele num: 16472
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.883895e6

VQSLOD
type: SiteQuality
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ClippingRankSum
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QD
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FS
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

South Asian
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allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.169043722235212e-4
allele num: 8554
num of homozygotes: 0

Other
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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FS
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.512630464377553e-5
allele num: 66110
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African
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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FS
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VQSLOD
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DP
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
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BaseQRankSum
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MQ
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GenotypeQuality
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variant carriers: 55

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 38727
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 50
allele frequency: 4.890453834115806e-3
allele num: 10224
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66082
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.343293954134816e-4
allele num: 11512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.972e1

DP
type: SiteQuality
SIO_000300: 1.87726e6

VQSLOD
type: SiteQuality
SIO_000300: 4.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.54e-1

FS
type: SiteQuality
SIO_000300: 1.288e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.571e0

QD
type: SiteQuality
SIO_000300: 1.297e1

GenotypeQuality
all individuals: 3859
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 577
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1367
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2322
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38585
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10216
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514600751241973e-5
allele num: 66024
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.872898e6

FS
type: SiteQuality
SIO_000300: 4.148e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.278e0

QD
type: SiteQuality
SIO_000300: 1.107e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.056e0

VQSLOD
type: SiteQuality
SIO_000300: 6.81e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

MQ
type: SiteQuality
SIO_000300: 5.934e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
all individuals: 3859
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2322
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1367
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38585
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.683570684265369e-5
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514600751241973e-5
allele num: 66024
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10216
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.056e0

FS
type: SiteQuality
SIO_000300: 4.148e0

MQRankSum
type: SiteQuality
SIO_000300: 2.01e-1

QD
type: SiteQuality
SIO_000300: 1.107e1

DP
type: SiteQuality
SIO_000300: 1.872898e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

VQSLOD
type: SiteQuality
SIO_000300: 6.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.278e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2659
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1366
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3856
bin: 9.75e1
variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66002
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.518648838845883e-4
allele num: 8526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10204
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.947e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.35e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.291e0

FS
type: SiteQuality
SIO_000300: 5.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.69e-1

DP
type: SiteQuality
SIO_000300: 1.871756e6

QD
type: SiteQuality
SIO_000300: 1.287e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.66e-1

GenotypeQuality
all individuals: 95
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 954
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 455
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9073
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 95
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 103
bin: 3.75e1
variant carriers: 3

GenotypeQuality
all individuals: 204
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1329
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 42
bin: 1.75e1
variant carriers: 3

GenotypeQuality
all individuals: 162
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4340
bin: 9.75e1
variant carriers: 2675

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

Other
type: Population
allele count: 16
allele frequency: 1.79372197309417e-2
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 884
allele frequency: 1.340165549862042e-2
allele num: 65962
num of homozygotes: 12

African
type: Population
allele count: 1741
allele frequency: 1.705525078369906e-1
allele num: 10208
num of homozygotes: 151

Latino
type: Population
allele count: 105
allele frequency: 9.125673561620024e-3
allele num: 11506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 85
allele frequency: 1.328540168802751e-2
allele num: 6398
num of homozygotes: 1

South Asian
type: Population
allele count: 34
allele frequency: 2.062606163552536e-3
allele num: 16484
num of homozygotes: 2

MQRankSum
type: SiteQuality
SIO_000300: 9.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.07e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.64e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

DP
type: SiteQuality
SIO_000300: 1.886208e6

QD
type: SiteQuality
SIO_000300: 1.493e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.29e-1

GenotypeQuality
all individuals: 1028
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1402
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2392
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2732
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 80
allele frequency: 9.402914903620122e-3
allele num: 8508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10176
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516438189979376e-5
allele num: 65944
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.807e0

MQRankSum
type: SiteQuality
SIO_000300: 2.52e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

VQSLOD
type: SiteQuality
SIO_000300: 6.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

QD
type: SiteQuality
SIO_000300: 1.287e1

DP
type: SiteQuality
SIO_000300: 1.751441e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.21e-1

GenotypeQuality
all individuals: 9499
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2394
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39978
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1401
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1731
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65930
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.697164724299878e-5
allele num: 11498
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.077e1

DP
type: SiteQuality
SIO_000300: 1.746418e6

MQRankSum
type: SiteQuality
SIO_000300: 9.16e-1

FS
type: SiteQuality
SIO_000300: 2.581e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.198e0

VQSLOD
type: SiteQuality
SIO_000300: 3.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.53e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

GenotypeQuality
all individuals: 45
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2394
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39978
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1731
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 569
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9499
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2734
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65930
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.066488716330988e-5
allele num: 16484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6388
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.581e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.198e0

MQRankSum
type: SiteQuality
SIO_000300: 9.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.53e0

VQSLOD
type: SiteQuality
SIO_000300: 3.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.92e0

DP
type: SiteQuality
SIO_000300: 1.746418e6

QD
type: SiteQuality
SIO_000300: 1.077e1

MQ
type: SiteQuality
SIO_000300: 5.954e1

GenotypeQuality
all individuals: 118
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9497
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1401
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39906
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1729
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2733
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10170
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.55055668476777e-5
allele num: 65926
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.734e0

MQ
type: SiteQuality
SIO_000300: 5.984e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.28e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e-1

QD
type: SiteQuality
SIO_000300: 1.593e1

DP
type: SiteQuality
SIO_000300: 1.744948e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

FS
type: SiteQuality
SIO_000300: 6.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.92e0

GenotypeQuality
all individuals: 1165
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2719
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.55497859160062e-5
allele num: 65862
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10134
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6350
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.532e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 4.61e-1

DP
type: SiteQuality
SIO_000300: 1.741754e6

QD
type: SiteQuality
SIO_000300: 1.73e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.974723538704581e-4
allele num: 10128
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.640334910811795e-4
allele num: 16482
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65842
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.89e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.569e1

DP
type: SiteQuality
SIO_000300: 1.741259e6

VQSLOD
type: SiteQuality
SIO_000300: 3.35e0

BaseQRankSum
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SIO_000300: 2.07e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.42e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.84e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10096
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65772
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.715356458079135e-5
allele num: 11474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.3e-2

FS
type: SiteQuality
SIO_000300: 2.458e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.351e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e0

DP
type: SiteQuality
SIO_000300: 1.734227e6

VQSLOD
type: SiteQuality
SIO_000300: 7.86e-1

QD
type: SiteQuality
SIO_000300: 1.266e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10092
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.716875871687587e-5
allele num: 11472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6286
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65754
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.069434328720563e-5
allele num: 16476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.79e0

QD
type: SiteQuality
SIO_000300: 1.274e1

MQ
type: SiteQuality
SIO_000300: 5.929e1

FS
type: SiteQuality
SIO_000300: 2.144e0

VQSLOD
type: SiteQuality
SIO_000300: 9.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.02e-1

DP
type: SiteQuality
SIO_000300: 1.733768e6

GenotypeQuality
all individuals: 39526
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 139
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GenotypeQuality
all individuals: 78
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6228
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.936406995230525e-5
allele num: 10064
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65670
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.24e0

FS
type: SiteQuality
SIO_000300: 1.692e0

VQSLOD
type: SiteQuality
SIO_000300: -1.958e0

MQRankSum
type: SiteQuality
SIO_000300: -7.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.728119e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.355e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.17e-1

QD
type: SiteQuality
SIO_000300: 2.97e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.938382031405287e-5
allele num: 10062
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6212
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.151e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.35e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.726742e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.583e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.25e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6088
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.082725060827251e-5
allele num: 16440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10002
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529847321237341e-5
allele num: 65366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

FS
type: SiteQuality
SIO_000300: 1.163e1

MQ
type: SiteQuality
SIO_000300: 5.944e1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.706845e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.3e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.180358829084042e-4
allele num: 8472
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.76731544800982e-5
allele num: 11406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6092
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65364
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9998
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VQSLOD
type: SiteQuality
SIO_000300: 7.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 9.85e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.706055e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.4e-1

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531065315246348e-5
allele num: 65314
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
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allele num: 8464
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QD
type: SiteQuality
SIO_000300: 1.19e1

DP
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9944
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65126
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.094588005850804e-5
allele num: 16408
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
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FS
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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SIO_000300: 9.389999999999999e-1

InbreedingCoeff
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SIO_000300: -8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-2

DP
type: SiteQuality
SIO_000300: 1.689285e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 9940
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65118
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5994
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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FS
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5906
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 15
allele frequency: 2.31724649323364e-4
allele num: 64732
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16376
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11342
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.15e-1

InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
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BaseQRankSum
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.665625e6

QD
type: SiteQuality
SIO_000300: 1.158e1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.76e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9902
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.542115165160534e-5
allele num: 64846
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11350
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-2

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.731e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.518e0

MQRankSum
type: SiteQuality
SIO_000300: 3.03e-1

DP
type: SiteQuality
SIO_000300: 1.658589e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

QD
type: SiteQuality
SIO_000300: 1.445e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9872
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5828
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8408
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64700
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Latino
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allele count: 1
allele frequency: 8.833922261484099e-5
allele num: 11320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 2.85e-1

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.637079e6

ClippingRankSum
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SIO_000300: -2.186e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8396
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16314
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5780
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European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.102121851346321e-5
allele num: 64472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.3e0

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 2.62e-1

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16300
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5760
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8390
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9848
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European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.658819144640805e-5
allele num: 64394
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Other
type: Population
allele count: 0
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QD
type: SiteQuality
SIO_000300: 1.059e1

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.5e-2

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.603015e6

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 2
allele frequency: 1.775568181818182e-4
allele num: 11264
num of homozygotes: 0

African
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5740
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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South Asian
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allele num: 16294
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Other
type: Population
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QD
type: SiteQuality
SIO_000300: 3.196e1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
type: Population
allele count: 0
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allele num: 9810
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Other
type: Population
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East Asian
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South Asian
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allele frequency: 6.141751627564181e-5
allele num: 16282
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Latino
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European (Non-Finnish)
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allele count: 1
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allele num: 64174
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European (Finnish)
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DP
type: SiteQuality
SIO_000300: 1.572377e6

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.46e-1