19-14046506-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046506
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046506
    reference: chr 19
allele count: 2
allele frequency: 5.221114185767242e-5
allele num: 38306
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+674A>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+674A>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+287A>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+287A>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.515+28A>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.269+28A>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.509+28A>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.305+28A>G
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8472
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32058
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12787
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4683
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4861
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28331
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3075
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2054
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

19-14046511-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046511
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046511
    reference: chr 19
allele count: 2
allele frequency: 4.95785820525533e-5
allele num: 40340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.305+23C>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+282C>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+282C>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+669C>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+669C>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.509+23C>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.515+23C>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.269+23C>A
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12871
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32416
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7327
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2702
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1213
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6746
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29636
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

19-14046521-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046521
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046521
    reference: chr 19
allele count: 1
allele frequency: 2.208578117408013e-5
allele num: 45278
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.305+13C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+659C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+659C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+272C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.509+13C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.515+13C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+272C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.269+13C>G
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5430
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32700
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4762
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4529
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4612
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2032
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum

19-14046522-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046522
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046522
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 45794
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.269+12C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.509+12C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+658C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+658C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+271C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+271C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.305+12C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.515+12C>G
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2306
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12095
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32566
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4457
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1385
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32112
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1251
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

19-14046522-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046522
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046522
    reference: chr 19
allele count: 3
allele frequency: 6.551076560248068e-5
allele num: 45794
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.509+12C>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+271C>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.515+12C>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+658C>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+271C>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+658C>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.305+12C>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.269+12C>A
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12095
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2306
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 32566
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1385
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1251
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2008
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/19-14046533-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046533
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046533
    reference: chr 19
allele count: 25
allele frequency: 4.553734061930783e-4
allele num: 54900
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+260G>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.269+1G>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.305+1G>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+647G>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.509+1G>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+260G>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.515+1G>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+647G>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10578
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 11311
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30081
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3709
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1234
  bin: 9.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 2693
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3827
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 4.25e1
  variant carriers: 0
hgvs: c.515+1G>T
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

19-14046540-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046540
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046540
    reference: chr 19
allele count: 3
allele frequency: 4.920775514221041e-5
allele num: 60966
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+640C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+253C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+640C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.509C>T
  hgvsp: ENSP00000345175.4:p.Ala170Val
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.503C>T
  hgvsp: ENSP00000442553.1:p.Ala168Val
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.263C>T
  hgvsp: ENSP00000254320.3:p.Ala88Val
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.299C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+253C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14485
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9756
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27520
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1214
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3535
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28426
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2193
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13740
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala170Val
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

19-14046542-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046542
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046542
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 63042
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.297G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.507G>A
  hgvsp: ENST00000339560.5:c.507G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.501G>A
  hgvsp: ENST00000538371.2:c.501G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+251G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+638G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.261G>A
  hgvsp: ENST00000254320.3:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+638G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+251G>A
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15493
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26420
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2616
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9574
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2383
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 980
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14513
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2055
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1211
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro169Pro
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum

19-14046543-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046543
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046543
    reference: chr 19
allele count: 3
allele frequency: 4.580292528016123e-5
allele num: 65498
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+250C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+637C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+637C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.500C>T
  hgvsp: ENSP00000442553.1:p.Pro167Leu
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.296C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.260C>T
  hgvsp: ENSP00000254320.3:p.Pro87Leu
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.506C>T
  hgvsp: ENSP00000345175.4:p.Pro169Leu
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+250C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16803
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9166
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25511
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16617
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro169Leu
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

19-14046548-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046548
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046549
    reference: chr 19
allele count: 1
allele frequency: 1.430901754285551e-5
allele num: 69886
alternate allele: CT
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.500dupA
  hgvsp: ENSP00000345175.4:p.Lys168GlufsTer77
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.254dupA
  hgvsp: ENSP00000254320.3:p.Lys86GlufsTer77
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.494dupA
  hgvsp: ENSP00000442553.1:p.Lys166GlufsTer77
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+631dupA
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.290dupA
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+631dupA
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+244dupA
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+244dupA
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8090
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22800
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1614
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23721
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys168GlufsTer77
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

19-14046548-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046548
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046548
    reference: chr 19
allele count: 64
allele frequency: 9.157771227427525e-4
allele num: 69886
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+632G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+245G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.255G>A
  hgvsp: ENST00000254320.3:c.255G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+632G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.291G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.501G>A
  hgvsp: ENST00000339560.5:c.501G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+245G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.495G>A
  hgvsp: ENST00000538371.2:c.495G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: synonymous
filter: VQSRTrancheINDEL99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20206
  bin: 2.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22800
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 1.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8090
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2740
  bin: 2.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 5.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1512
  bin: 3.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 23721
  bin: 2.25e1
  variant carriers: 4
hgvs: p.Glu167Glu
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

19-14046562-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046562
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046562
    reference: chr 19
allele count: 5
allele frequency: 5.680269017540671e-5
allele num: 88024
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.277C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+618C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+618C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+231C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.481C>T
  hgvsp: ENSP00000442553.1:p.Leu161Phe
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.241C>T
  hgvsp: ENSP00000254320.3:p.Leu81Phe
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.487C>T
  hgvsp: ENSP00000345175.4:p.Leu163Phe
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+231C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5619
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28341
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2255
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu163Phe
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

19-14046564-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046564
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046564
    reference: chr 19
allele count: 1
allele frequency: 1.111555733404473e-5
allele num: 89964
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.479C>T
  hgvsp: ENSP00000442553.1:p.Pro160Leu
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+616C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.275C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+616C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.485C>T
  hgvsp: ENSP00000345175.4:p.Pro162Leu
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+229C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.239C>T
  hgvsp: ENSP00000254320.3:p.Pro80Leu
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+229C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14556
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29538
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5846
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1198
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1720
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro162Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ

19-14046565-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046565
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046565
    reference: chr 19
allele count: 1
allele frequency: 1.102754681193622e-5
allele num: 90682
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+228C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.478C>T
  hgvsp: ENSP00000442553.1:p.Pro160Ser
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.238C>T
  hgvsp: ENSP00000254320.3:p.Pro80Ser
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+615C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.484C>T
  hgvsp: ENSP00000345175.4:p.Pro162Ser
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.274C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+615C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+228C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5937
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1635
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro162Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

19-14046572-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046572
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046572
    reference: chr 19
allele count: 5
allele frequency: 5.280834794364293e-5
allele num: 94682
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+221G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.231G>A
  hgvsp: ENST00000254320.3:c.231G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.471G>A
  hgvsp: ENST00000538371.2:c.471G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.477G>A
  hgvsp: ENST00000339560.5:c.477G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+608G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+221G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.267G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+608G>A
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4334
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32335
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6534
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Glu159Glu
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

19-14046576-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046576
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046576
    reference: chr 19
allele count: 1
allele frequency: 1.032353973530444e-5
allele num: 96866
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.263T>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+604T>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.473T>C
  hgvsp: ENSP00000345175.4:p.Met158Thr
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+217T>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.227T>C
  hgvsp: ENSP00000254320.3:p.Met76Thr
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.467T>C
  hgvsp: ENSP00000442553.1:p.Met156Thr
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+217T>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+604T>C
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3983
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 931
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35931
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Met158Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: A
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-14046579-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046579
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046579
    reference: chr 19
allele count: 1
allele frequency: 1.019139438657997e-5
allele num: 98122
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.470T>C
  hgvsp: ENSP00000345175.4:p.Val157Ala
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.464T>C
  hgvsp: ENSP00000442553.1:p.Val155Ala
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+601T>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.224T>C
  hgvsp: ENSP00000254320.3:p.Val75Ala
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+601T>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+214T>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+214T>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.260T>C
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10729
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7157
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 695
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2588
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11994
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val157Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: A
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

19-14046586-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046586
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046586
    reference: chr 19
allele count: 1
allele frequency: 9.962143853357243e-6
allele num: 100380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+594A>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+207A>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.457A>T
  hgvsp: ENSP00000442553.1:p.Asn153Tyr
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.463A>T
  hgvsp: ENSP00000345175.4:p.Asn155Tyr
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+207A>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.217A>T
  hgvsp: ENSP00000254320.3:p.Asn73Tyr
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+594A>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.253A>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3443
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9660
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7684
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2677
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asn155Tyr
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-14046590-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046590
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046590
    reference: chr 19
allele count: 1
allele frequency: 9.861543923316634e-6
allele num: 101404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+203T>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.453T>C
  hgvsp: ENST00000538371.2:c.453T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.249T>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.459T>C
  hgvsp: ENST00000339560.5:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.213T>C
  hgvsp: ENST00000254320.3:c.213T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+590T>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+590T>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+203T>C
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35288
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8049
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2731
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 867
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala153Ala
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

19-14046591-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046591
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046591
    reference: chr 19
allele count: 8
allele frequency: 7.880531147799361e-5
allele num: 101516
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.452C>T
  hgvsp: ENSP00000442553.1:p.Ala151Val
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.458C>T
  hgvsp: ENSP00000345175.4:p.Ala153Val
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.212C>T
  hgvsp: ENSP00000254320.3:p.Ala71Val
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+589C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.248C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+202C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+202C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+589C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3440
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9053
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35090
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8154
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38406
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2680
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala153Val
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

19-14046597-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046597
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046596
    reference: chr 19
allele count: 1
allele frequency: 9.76390868792595e-6
allele num: 102418
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.241delG
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+582delG
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.451delG
  hgvsp: ENSP00000345175.4:p.Asp151IlefsTer7
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+195delG
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+195delG
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.445delG
  hgvsp: ENSP00000442553.1:p.Asp149IlefsTer7
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.205delG
  hgvsp: ENSP00000254320.3:p.Asp69IlefsTer7
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+582delG
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8668
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8545
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp151IlefsTer7
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: TC
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum

19-14046599-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046599
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046599
    reference: chr 19
allele count: 1
allele frequency: 9.769441187964048e-6
allele num: 102360
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.240G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.444G>A
  hgvsp: ENST00000538371.2:c.444G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+581G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+194G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+194G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+581G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.204G>A
  hgvsp: ENST00000254320.3:c.204G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.450G>A
  hgvsp: ENST00000339560.5:c.450G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34766
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8594
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8703
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 867
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38838
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala150Ala
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

19-14046601-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046601
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046601
    reference: chr 19
allele count: 7
allele frequency: 6.832601268911664e-5
allele num: 102450
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+192G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.448G>A
  hgvsp: ENSP00000345175.4:p.Ala150Thr
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+579G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.202G>A
  hgvsp: ENSP00000254320.3:p.Ala68Thr
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+579G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+192G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.442G>A
  hgvsp: ENSP00000442553.1:p.Ala148Thr
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.238G>A
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3848
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8846
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34490
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8575
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38790
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 825
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10869
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1209
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala150Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-14046602-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046602
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046602
    reference: chr 19
allele count: 1
allele frequency: 9.780907668231611e-6
allele num: 102240
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+578C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+191C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.201C>T
  hgvsp: ENST00000254320.3:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+191C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.441C>T
  hgvsp: ENST00000538371.2:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.447C>T
  hgvsp: ENST00000339560.5:c.447C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.237C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+578C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8855
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8669
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33962
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val149Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-14046604-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046604
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046604
    reference: chr 19
allele count: 1
allele frequency: 9.762955441871364e-6
allele num: 102428
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+576G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+189G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.439G>A
  hgvsp: ENSP00000442553.1:p.Val147Ile
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.199G>A
  hgvsp: ENSP00000254320.3:p.Val67Ile
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.445G>A
  hgvsp: ENSP00000345175.4:p.Val149Ile
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.235G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+576G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+189G>A
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8953
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 921
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11096
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38698
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2707
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val149Ile
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

19-14046606-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046606
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046606
    reference: chr 19
allele count: 2
allele frequency: 1.96575652139726e-5
allele num: 101742
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.437G>A
  hgvsp: ENSP00000442553.1:p.Arg146His
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+187G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+574G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.197G>A
  hgvsp: ENSP00000254320.3:p.Arg66His
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.233G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.443G>A
  hgvsp: ENSP00000345175.4:p.Arg148His
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+187G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+574G>A
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33066
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4707
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8819
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8988
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 996
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg148His
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

19-14046607-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046607
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046607
    reference: chr 19
allele count: 3
allele frequency: 2.955432084170706e-5
allele num: 101508
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+186C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+186C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.196C>T
  hgvsp: ENSP00000254320.3:p.Arg66Cys
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.232C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.436C>T
  hgvsp: ENSP00000442553.1:p.Arg146Cys
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+573C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.442C>T
  hgvsp: ENSP00000345175.4:p.Arg148Cys
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+573C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9072
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4899
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8916
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg148Cys
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum

19-14046615-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046615
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046615
    reference: chr 19
allele count: 6
allele frequency: 6.006366748753679e-5
allele num: 99894
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+178G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.434G>A
  hgvsp: ENSP00000345175.4:p.Arg145Gln
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+565G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.188G>A
  hgvsp: ENSP00000254320.3:p.Arg63Gln
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.428G>A
  hgvsp: ENSP00000442553.1:p.Arg143Gln
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+565G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.224G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+178G>A
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9212
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9593
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30291
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 921
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13668
  bin: 2.25e1
  variant carriers: 1
hgvs: p.Arg145Gln
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

19-14046616-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046616
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046616
    reference: chr 19
allele count: 2
allele frequency: 2.008233758409479e-5
allele num: 99590
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+564C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.427C>T
  hgvsp: ENSP00000442553.1:p.Arg143Trp
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.433C>T
  hgvsp: ENSP00000345175.4:p.Arg145Trp
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.223C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+177C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+564C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.187C>T
  hgvsp: ENSP00000254320.3:p.Arg63Trp
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+177C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29907
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9746
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1246
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14126
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 999
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg145Trp
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: DP

19-14046618-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046618
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046618
    reference: chr 19
allele count: 3
allele frequency: 3.043954705953975e-5
allele num: 98556
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+175C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.221C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+562C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+562C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+175C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.431C>T
  hgvsp: ENSP00000345175.4:p.Pro144Leu
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.185C>T
  hgvsp: ENSP00000254320.3:p.Pro62Leu
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.425C>T
  hgvsp: ENSP00000442553.1:p.Pro142Leu
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8852
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28566
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1732
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2297
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15329
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33543
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro144Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

19-14046619-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046619
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046619
    reference: chr 19
allele count: 1
allele frequency: 1.015867855909303e-5
allele num: 98438
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+561C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+174C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.220C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.184C>T
  hgvsp: ENSP00000254320.3:p.Pro62Ser
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+174C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.424C>T
  hgvsp: ENSP00000442553.1:p.Pro142Ser
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.430C>T
  hgvsp: ENSP00000345175.4:p.Pro144Ser
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+561C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7459
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8885
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1201
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro144Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff

19-14046620-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046620
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046620
    reference: chr 19
allele count: 5
allele frequency: 5.094243504839531e-5
allele num: 98150
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.423G>A
  hgvsp: ENST00000538371.2:c.423G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.183G>A
  hgvsp: ENST00000254320.3:c.183G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+560G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.219G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.429G>A
  hgvsp: ENST00000339560.5:c.429G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+173G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+173G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+560G>A
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7811
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10422
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28059
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2227
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1452
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu143Leu
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

19-14046631-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046631
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046631
    reference: chr 19
allele count: 42
allele frequency: 4.548014033871876e-4
allele num: 92348
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.412C>G
  hgvsp: ENSP00000442553.1:p.Pro138Ala
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+162C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.172C>G
  hgvsp: ENSP00000254320.3:p.Pro58Ala
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.208C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+549C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.418C>G
  hgvsp: ENSP00000345175.4:p.Pro140Ala
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+549C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+162C>G
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21453
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12865
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2660
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 7147
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 12437
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21721
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2226
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1787
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 9.75e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 980
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro140Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

19-14046648-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046648
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046648
    reference: chr 19
allele count: 1
allele frequency: 1.212033064261993e-5
allele num: 82506
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.406-5C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+145C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+532C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-5C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-5C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+532C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.400-5C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+145C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4557
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1190
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29868
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2788
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 2.5e0
  variant carriers: 0
hgvs: c.406-5C>T
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff

19-14046652-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046652
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046652
    reference: chr 19
allele count: 1
allele frequency: 1.273398701133325e-5
allele num: 78530
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+141T>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-9T>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.400-9T>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.406-9T>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+528T>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+141T>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-9T>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+528T>C
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21421
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3907
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17441
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3507
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8490
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31310
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3953
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3731
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum

19-14046653-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046653
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046653
    reference: chr 19
allele count: 1
allele frequency: 1.334543319276144e-5
allele num: 74932
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.406-10G>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.400-10G>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+527G>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-10G>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+140G>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+140G>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+527G>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-10G>C
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17914
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3983
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21870
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4077
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1090
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3516
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4065
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30439
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP

19-14046658-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046658
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046658
    reference: chr 19
allele count: 1
allele frequency: 1.350621285791464e-5
allele num: 74040
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.406-15G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.400-15G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-15G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+135G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+135G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+522G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+522G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-15G>A
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3696
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4272
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21935
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6790
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2988
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3369
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8029
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1157
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1331
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

19-14046666-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046666
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046666
    reference: chr 19
allele count: 1
allele frequency: 1.487077298277965e-5
allele num: 67246
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+514G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+514G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.406-23G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+127G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.400-23G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+127G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-23G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-23G>A
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21129
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6382
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19670
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1727
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1340
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6969
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6156
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1808
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-14046667-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046667
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046667
    reference: chr 19
allele count: 7
allele frequency: 1.051745898190997e-4
allele num: 66556
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+126C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+126C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+513C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.406-24C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-24C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.400-24C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-24C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+513C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3144
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6412
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5241
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21107
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19817
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7049
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1228
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1729
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

19-14046682-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046682
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046682
    reference: chr 19
allele count: 2
allele frequency: 4.039914353815699e-5
allele num: 49506
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+111G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-39G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.406-39G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-39G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+111G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+498G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.400-39G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+498G>A
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3733
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3381
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9927
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14500
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24620
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1206
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1208
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20385
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3473
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11116
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-14046683-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046683
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046683
    reference: chr 19
allele count: 1
allele frequency: 2.022735547554513e-5
allele num: 49438
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+110C>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+110C>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+497C>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+497C>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-40C>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.406-40C>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.400-40C>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-40C>A
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14431
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9979
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24743
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3760
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3603
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4885
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20829
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3442
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

19-14046683-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046683
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046683
    reference: chr 19
allele count: 1
allele frequency: 2.022735547554513e-5
allele num: 49438
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-40C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.400-40C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+110C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+110C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+497C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-40C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.406-40C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+497C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14431
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24743
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9979
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3760
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11182
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3603
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ

19-14046687-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046687
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046687
    reference: chr 19
allele count: 2
allele frequency: 4.209462872537464e-5
allele num: 47512
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.400-44A>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+106A>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-44A>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+106A>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-44A>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.406-44A>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+493A>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+493A>G
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13335
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3784
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25794
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3567
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3762
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1051
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5688
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 763
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11340
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD

19-14046695-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046695
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046695
    reference: chr 19
allele count: 1
allele frequency: 2.26490306214894e-5
allele num: 44152
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.400-52G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-52G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.406-52G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+485G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+98G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-52G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+98G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+485G>A
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26671
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12470
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3504
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1837
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10709
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9877
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

19-14046749-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046749
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046749
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 20638
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.399+44C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+431C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+44C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+44C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-106C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.405+44C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+431C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-106C>G
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33314
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12425
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3288
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2856
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4113
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7565
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3174
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ

19-14046765-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046765
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046765
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 19652
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+28G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+415G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.399+28G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+28G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.405+28G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-122G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-122G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+415G>A
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34178
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10745
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6471
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2898
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4644
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31037
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

19-14046766-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046766
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046766
    reference: chr 19
allele count: 1
allele frequency: 5.08646998982706e-5
allele num: 19660
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+27C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+27C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-123C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.405+27C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.399+27C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+414C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+414C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-123C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34274
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3419
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10726
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6792
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4785
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2930
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31427
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

19-14046767-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046767
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046767
    reference: chr 19
allele count: 1
allele frequency: 5.104645227156713e-5
allele num: 19590
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+413C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.405+26C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+26C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.399+26C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-124C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-124C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+26C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+413C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3419
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34304
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10632
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3130
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2789
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6493
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

19-14046772-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046772
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046772
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 19458
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.405+21G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+408G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.399+21G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+21G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+408G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+21G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-129G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-129G>A
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34211
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10820
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4973
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31718
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1660
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2364
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2781
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

19-14046773-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046773
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046773
    reference: chr 19
allele count: 13
allele frequency: 6.73714759535655e-4
allele num: 19296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+20C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.405+20C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.399+20C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+20C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-130C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+407C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+407C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-130C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10565
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34197
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2287
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3256
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2418
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4935
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP

19-14046774-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046774
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046774
    reference: chr 19
allele count: 1
allele frequency: 5.159426271798576e-5
allele num: 19382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-131C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+406C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+406C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.399+19C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+19C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+19C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.405+19C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-131C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34179
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3513
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10644
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2287
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31381
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6840
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2052
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2997
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD

19-14046787-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046787
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046787
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 19384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.50+6C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-144C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-144C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.399+6C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+393C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.405+6C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.399+6C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+393C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33921
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11098
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5320
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1811
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8015
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
hgvs: c.405+6C>T
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum

19-14046793-CTTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046793
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046790
    reference: chr 19
allele count: 1
allele frequency: 5.139274334463974e-5
allele num: 19458
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: splice_region_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.47_49delCAA
  hgvsp: ENSP00000464972.1:p.Asn16del
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-153_160-151delCAA
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: splice_region_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.396_398delCAA
  hgvsp: ENSP00000442553.1:p.Asn132del
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  consequence: splice_region_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.402_404delCAA
  hgvsp: ENSP00000345175.4:p.Asn134del
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: splice_region_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.396_398delCAA
  hgvsp: ENSP00000440080.1:p.Asn132del
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+384_334+386delCAA
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+384_159+386delCAA
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-153_196-151delCAA
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33770
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11393
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8625
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31672
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asn134del
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: CTTG
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

19-14046804-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046804
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046804
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 19594
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.388G>A
  hgvsp: ENSP00000440080.1:p.Ala130Thr
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.39G>A
  hgvsp: ENSP00000464972.1:p.Ala14Thr
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+376G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.388G>A
  hgvsp: ENSP00000442553.1:p.Ala130Thr
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-161G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-161G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.394G>A
  hgvsp: ENSP00000345175.4:p.Ala132Thr
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+376G>A
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33364
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11655
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5831
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1326
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2279
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala132Thr
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum

19-14046820-C-CAGCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046820
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046824
    reference: chr 19
allele count: 4
allele frequency: 2.01999798000202e-4
allele num: 19802
alternate allele: CAGCT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.368_371dupAGCT
  hgvsp: ENSP00000442553.1:p.Gln125AlafsTer119
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.368_371dupAGCT
  hgvsp: ENSP00000440080.1:p.Gln125AlafsTer30
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.19_22dupAGCT
  hgvsp: ENSP00000464972.1:p.Gln9AlafsTer74
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-181_196-178dupAGCT
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.374_377dupAGCT
  hgvsp: ENSP00000345175.4:p.Gln127AlafsTer119
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+356_334+359dupAGCT
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-181_160-178dupAGCT
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+356_159+359dupAGCT
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33228
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11586
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31960
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1357
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 820
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln127AlafsTer119
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

19-14046824-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046824
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046824
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 19822
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+356A>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-181A>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.19A>G
  hgvsp: ENSP00000464972.1:p.Gln7Arg
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.368A>G
  hgvsp: ENSP00000442553.1:p.Gln123Arg
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-181A>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.368A>G
  hgvsp: ENSP00000440080.1:p.Gln123Arg
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+356A>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.374A>G
  hgvsp: ENSP00000345175.4:p.Gln125Arg
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3019
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11238
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33416
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1123
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9588
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln125Arg
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

19-14046838-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046838
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046838
    reference: chr 19
allele count: 1
allele frequency: 5.11561285041948e-5
allele num: 19548
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.360C>T
  hgvsp: ENST00000339560.5:c.360C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+342C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.354C>T
  hgvsp: ENST00000538371.2:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.5C>T
  hgvsp: ENST00000588764.1:c.5C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-195C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.354C>T
  hgvsp: ENST00000538517.2:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-195C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+342C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34351
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8699
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32877
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2051
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Phe120Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

19-14046838-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046838
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046838
    reference: chr 19
allele count: 3
allele frequency: 1.534683855125844e-4
allele num: 19548
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+342C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.354C>G
  hgvsp: ENSP00000442553.1:p.Phe118Leu
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.5C>G
  hgvsp: ENSP00000464972.1:p.Phe2Leu
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.360C>G
  hgvsp: ENSP00000345175.4:p.Phe120Leu
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-195C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+342C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-195C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.354C>G
  hgvsp: ENSP00000440080.1:p.Phe118Leu
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34351
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8699
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7072
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5743
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2051
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Phe120Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS

19-14046842-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046842
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046842
    reference: chr 19
allele count: 1
allele frequency: 5.195344970906068e-5
allele num: 19248
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000464972
  ensembl transcript: ENST00000588764
  gene symbol: PODNL1
  hgvsc: ENST00000588764.1:c.1C>G
  hgvsp: ENST00000588764.1:c.1C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-199C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-199C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+338C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.350C>G
  hgvsp: ENSP00000442553.1:p.Ala117Gly
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+338C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.350C>G
  hgvsp: ENSP00000440080.1:p.Ala117Gly
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.356C>G
  hgvsp: ENSP00000345175.4:p.Ala119Gly
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34497
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7657
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5800
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32501
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1312
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala119Gly
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

19-14046846-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046846
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046846
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 19220
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+334G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.346G>A
  hgvsp: ENSP00000440080.1:p.Glu116Lys
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-203G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-203G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.352G>A
  hgvsp: ENSP00000345175.4:p.Glu118Lys
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.346G>A
  hgvsp: ENSP00000442553.1:p.Glu116Lys
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+334G>A
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7387
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2535
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34604
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2373
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1274
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5623
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 944
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32796
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu118Lys
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

19-14046847-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046847
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046847
    reference: chr 19
allele count: 2
allele frequency: 1.042426769519441e-4
allele num: 19186
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.345C>T
  hgvsp: ENST00000538371.2:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+333C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.351C>T
  hgvsp: ENST00000339560.5:c.351C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.345C>T
  hgvsp: ENST00000538517.2:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-204C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+333C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-204C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34682
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3727
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2355
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 882
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1276
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32869
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5835
  bin: 2.25e1
  variant carriers: 1
hgvs: p.Asp117Asp
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

19-14046860-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046860
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046860
    reference: chr 19
allele count: 1
allele frequency: 5.403068943159715e-5
allele num: 18508
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-217C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+320C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-217C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.335-3C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.341-3C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+320C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.335-3C>G
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 34436
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5011
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1218
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3146
  bin: 2.5e0
  variant carriers: 0
hgvs: c.341-3C>G
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: FS

19-14046866-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046866
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046866
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 18424
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+314C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.335-9C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+314C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.341-9C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-223C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.335-9C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-223C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4425
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34256
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3475
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1207
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31704
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

19-14046874-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046874
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046874
    reference: chr 19
allele count: 1
allele frequency: 5.515719801434087e-5
allele num: 18130
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.341-17C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+306C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+306C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.335-17C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-231C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.335-17C>G
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-231C>G
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3572
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4516
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2988
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29780
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3815
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

19-14046890-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046890
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046890
    reference: chr 19
allele count: 3
allele frequency: 1.723741668581935e-4
allele num: 17404
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.341-33T>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-247T>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+290T>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+290T>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-247T>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.335-33T>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.335-33T>A
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31427
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26045
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 954
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2330
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 897
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

19-14046903-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14046903
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14046903
    reference: chr 19
allele count: 1
allele frequency: 5.924872615238772e-5
allele num: 16878
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.341-46C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.335-46C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.335-46C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.196-260C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+277C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+277C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.160-260C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3073
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30902
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23363
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

19-14047132-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14047132
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14047132
    reference: chr 19
allele count: 3
allele frequency: 2.502126807786619e-5
allele num: 119898
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+48G>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.159+48G>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+48G>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.340+48G>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.195+48G>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.334+48G>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.334+48G>C
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8150
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1913
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19872
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9094
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

19-14047132-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14047132
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14047132
    reference: chr 19
allele count: 2
allele frequency: 1.668084538524412e-5
allele num: 119898
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.334+48G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.195+48G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.334+48G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+48G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.340+48G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.159+48G>A
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+48G>A
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8150
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3604
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5271
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19872
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

19-14047133-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14047133
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14047133
    reference: chr 19
allele count: 1
allele frequency: 8.335556148306214e-6
allele num: 119968
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.195+47C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.334+47C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+47C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.159+47C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.334+47C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.340+47C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+47C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4395
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16419
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5268
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4091
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1402
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

19-14047134-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14047134
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14047134
    reference: chr 19
allele count: 5
allele frequency: 4.166041760402606e-5
allele num: 120018
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.195+46C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.334+46C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+46C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.340+46C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.334+46C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+46C>T
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.159+46C>T
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4494
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16429
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20344
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 759
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

19-14047140-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 14047140
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 14047140
    reference: chr 19
allele count: 1
allele frequency: 8.333472224537076e-6
allele num: 119998
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl transcript: ENST00000587288
  gene symbol: PODNL1
  hgvsc: ENST00000587288.1:n.195+40G>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000466659
  ensembl transcript: ENST00000585607
  gene symbol: PODNL1
  hgvsc: ENST00000585607.1:c.334+40G>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000254320
  ensembl transcript: ENST00000254320
  gene symbol: PODNL1
  hgvsc: ENST00000254320.3:c.159+40G>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000442553
  ensembl transcript: ENST00000538371
  gene symbol: PODNL1
  hgvsc: ENST00000538371.2:c.334+40G>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000440080
  ensembl transcript: ENST00000538517
  gene symbol: PODNL1
  hgvsc: ENST00000538517.2:c.334+40G>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000345175
  ensembl transcript: ENST00000339560
  gene symbol: PODNL1
  hgvsc: ENST00000339560.5:c.340+40G>C
  variant of: http://identifiers.org/hgnc/26275
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132000
  ensembl protein: ENSP00000468151
  ensembl transcript: ENST00000586075
  gene symbol: PODNL1
  hgvsc: ENST00000586075.1:c.159+40G>C
  variant of: http://identifiers.org/hgnc/26275
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8163
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3598
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17041
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11015
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20842
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3531
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1909
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 102
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3013
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7598
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 919
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2364
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1212
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 8.920606601248885e-5
allele num: 22420
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3256
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3418
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

DP
type: SiteQuality
SIO_000300: 6.16245e5

VQSLOD
type: SiteQuality
SIO_000300: 2.63e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.77e-2

QD
type: SiteQuality
SIO_000300: 1.296e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.5e-1

GenotypeQuality
all individuals: 527
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4688
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4938
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2432
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2070
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2958
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.71591526344378e-4
allele num: 3682
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1734
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.241241835609467e-5
allele num: 23578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3024
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3476
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.773e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.464e0

MQRankSum
type: SiteQuality
SIO_000300: -1.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.49e-2

QD
type: SiteQuality
SIO_000300: 4.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.02e0

DP
type: SiteQuality
SIO_000300: 6.33709e5

GenotypeQuality
all individuals: 573
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1450
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32134
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4540
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1211
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5487
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.787018101946527e-5
allele num: 26406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1944
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4228
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.893e0

FS
type: SiteQuality
SIO_000300: 2.52e0

MQRankSum
type: SiteQuality
SIO_000300: 3.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.194e0

VQSLOD
type: SiteQuality
SIO_000300: 9.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.05e-2

QD
type: SiteQuality
SIO_000300: 1.296e1

DP
type: SiteQuality
SIO_000300: 6.87447e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

GenotypeQuality
all individuals: 4477
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1960
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3690
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4932
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4248
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3926
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-2

QD
type: SiteQuality
SIO_000300: 7.98e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.04e0

FS
type: SiteQuality
SIO_000300: 3.424e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e-1

DP
type: SiteQuality
SIO_000300: 6.93972e5

GenotypeQuality
all individuals: 4479
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 8.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26724
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4932
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 8.130081300813008e-4
allele num: 3690
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1960
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3926
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 314
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.93972e5

VQSLOD
type: SiteQuality
SIO_000300: -5.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.424e0

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.04e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e-1

QD
type: SiteQuality
SIO_000300: 7.98e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-2

GenotypeQuality
all individuals: 659
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 8.25e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11182
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 6.75e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 1.817520901490367e-4
allele num: 5502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 24
allele frequency: 7.472445357743321e-4
allele num: 32118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2306
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4812
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5210
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4562
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.056e0

FS
type: SiteQuality
SIO_000300: 2.421e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.200000000000001e-3

QD
type: SiteQuality
SIO_000300: 1.15e1

DP
type: SiteQuality
SIO_000300: 7.84036e5

ClippingRankSum
type: SiteQuality
SIO_000300: 4.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.26e0

GenotypeQuality
all individuals: 333
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3481
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 164
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variant carriers: 0

GenotypeQuality
all individuals: 876
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.703577512776831e-4
allele num: 5870
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5098
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5938
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.611357387352e-5
allele num: 35642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 406
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.395e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

MQ
type: SiteQuality
SIO_000300: 5.896e1

FS
type: SiteQuality
SIO_000300: 3.796e0

VQSLOD
type: SiteQuality
SIO_000300: -4.458e-1

DP
type: SiteQuality
SIO_000300: 8.42883e5

QD
type: SiteQuality
SIO_000300: 9.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.72e-1

GenotypeQuality
all individuals: 525
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 883
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variant carriers: 0

GenotypeQuality
all individuals: 102
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variant carriers: 0

GenotypeQuality
all individuals: 230
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GenotypeQuality
all individuals: 694
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variant carriers: 0

GenotypeQuality
all individuals: 172
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GenotypeQuality
all individuals: 1815
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3410
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27328
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6014
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36826
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6190
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5754
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5254
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

FS
type: SiteQuality
SIO_000300: 3.724e0

DP
type: SiteQuality
SIO_000300: 8.65663e5

ClippingRankSum
type: SiteQuality
SIO_000300: 5.31e-1

QD
type: SiteQuality
SIO_000300: 1.634e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5446
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.244646333549643e-4
allele num: 6164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.617252931323283e-5
allele num: 38208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2656
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6036
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

DP
type: SiteQuality
SIO_000300: 8.87471e5

QD
type: SiteQuality
SIO_000300: 1.273e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.53e0

VQSLOD
type: SiteQuality
SIO_000300: 9.370000000000001e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5932
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.460993256878476e-5
allele num: 40634
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.500000000000001e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.238e0

QD
type: SiteQuality
SIO_000300: 8.8e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.081e1

DP
type: SiteQuality
SIO_000300: 9.46777e5

FS
type: SiteQuality
SIO_000300: 9.6122e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.156e0

MQ
type: SiteQuality
SIO_000300: 5.799e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1008
bin: 5.25e1
variant carriers: 4

GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
variant carriers: 2

GenotypeQuality
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bin: 1.75e1
variant carriers: 4

GenotypeQuality
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bin: 6.75e1
variant carriers: 5

GenotypeQuality
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bin: 4.25e1
variant carriers: 9

GenotypeQuality
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bin: 3.25e1
variant carriers: 8

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 8

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 106
bin: 9.25e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5932
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6738
num of homozygotes: 0

African
type: Population
allele count: 21
allele frequency: 3.36e-3
allele num: 6250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 37
allele frequency: 9.105675050450362e-4
allele num: 40634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 2.302379125095933e-3
allele num: 2606
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.799e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.238e0

FS
type: SiteQuality
SIO_000300: 9.6122e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.500000000000001e-3

DP
type: SiteQuality
SIO_000300: 9.46777e5

VQSLOD
type: SiteQuality
SIO_000300: -1.081e1

QD
type: SiteQuality
SIO_000300: 8.8e-1

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -2.86e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.25e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 494
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GenotypeQuality
all individuals: 1852
bin: 2.75e1
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GenotypeQuality
all individuals: 1200
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 524
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 596
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 4.667444574095683e-4
allele num: 8570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.980982567353407e-5
allele num: 50480
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7210
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7430
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10012
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.71e-1

QD
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SIO_000300: 1.135e1

MQRankSum
type: SiteQuality
SIO_000300: 2.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.65e-1

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.118e0

DP
type: SiteQuality
SIO_000300: 1.101375e6

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3818
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7346
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8770
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 9.635767970707265e-5
allele num: 10378
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-2

MQRankSum
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BaseQRankSum
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VQSLOD
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QD
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SIO_000300: 1.004e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.11e-1

DP
type: SiteQuality
SIO_000300: 1.119408e6

FS
type: SiteQuality
SIO_000300: 3.998e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3864
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.928417155199013e-5
allele num: 51856
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10532
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 7612
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8826
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.389e0

VQSLOD
type: SiteQuality
SIO_000300: 1.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-1

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.126429e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.84e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.54841997961264e-4
allele num: 7848
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
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European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.716090672612412e-5
allele num: 53820
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.084128360797918e-4
allele num: 9224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 650
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4088
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.282e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

DP
type: SiteQuality
SIO_000300: 1.168385e6

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.973e0

QD
type: SiteQuality
SIO_000300: 9.99e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.305647840531562e-5
allele num: 12040
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7700
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54842
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7980
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4194
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.35e0

VQSLOD
type: SiteQuality
SIO_000300: -2.092e0

DP
type: SiteQuality
SIO_000300: 1.190127e6

MQRankSum
type: SiteQuality
SIO_000300: -9.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.896e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.515e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4250
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 676
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.805510417795111e-5
allele num: 55386
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South Asian
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allele count: 0
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African
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allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -4.29e-1

VQSLOD
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BaseQRankSum
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FS
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 56400
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South Asian
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African
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allele frequency: 1.215362177929023e-4
allele num: 8228
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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InbreedingCoeff
type: SiteQuality
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MQ
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QD
type: SiteQuality
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VQSLOD
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BaseQRankSum
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DP
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4420
num of homozygotes: 0

African
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allele frequency: 1.203948952564411e-4
allele num: 8306
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East Asian
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allele frequency: 0.0e0
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Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 2.38e-1

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
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DP
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InbreedingCoeff
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QD
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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allele num: 56914
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African
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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Other
type: Population
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Latino
type: Population
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allele frequency: 0.0e0
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DP
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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VQSLOD
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 9888
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.744044089434581e-5
allele num: 57338
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.06e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
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ClippingRankSum
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.248205e6

MQ
type: SiteQuality
SIO_000300: 6.067e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4404
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.745992946188497e-5
allele num: 57274
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.09e0

ClippingRankSum
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SIO_000300: 1.53e-1

ReadPosRankSum
type: SiteQuality
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DP
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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VQSLOD
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QD
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.491742030098816e-5
allele num: 57278
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 7962
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13936
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9856
num of homozygotes: 0

African
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allele count: 5
allele frequency: 6.011060351045924e-4
allele num: 8318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4404
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.68e-1

QD
type: SiteQuality
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VQSLOD
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DP
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8280
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4372
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9810
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 1
allele frequency: 1.258494840171155e-4
allele num: 7946
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 57146
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.233e0

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.244352e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.71e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.47e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14066
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.747457449411107e-5
allele num: 57226
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9824
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8288
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7952
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
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FS
type: SiteQuality
SIO_000300: 7.415e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.69e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.87e-1

QD
type: SiteQuality
SIO_000300: 1.056e1

VQSLOD
type: SiteQuality
SIO_000300: -5.686e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.03e0

DP
type: SiteQuality
SIO_000300: 1.246899e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9710
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7882
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8226
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4308
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.759572072072072e-5
allele num: 56832
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 696
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South Asian
type: Population
allele count: 1
allele frequency: 7.098239636570131e-5
allele num: 14088
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MQRankSum
type: SiteQuality
SIO_000300: 8.090000000000001e-1

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
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QD
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

DP
type: SiteQuality
SIO_000300: 1.237594e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4290
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Other
type: Population
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South Asian
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allele frequency: 7.084159818645509e-5
allele num: 14116
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African
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allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.765162748005366e-5
allele num: 56652
num of homozygotes: 0

East Asian
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allele frequency: 1.270971021860702e-4
allele num: 7868
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
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BaseQRankSum
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MQRankSum
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

QD
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.22e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
type: Population
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African
type: Population
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 1.055743243243243e-4
allele num: 9472
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South Asian
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allele count: 4
allele frequency: 2.838087129274869e-4
allele num: 14094
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.79752660339373e-5
allele num: 55632
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

DP
type: SiteQuality
SIO_000300: 1.21243e6

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.58e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

East Asian
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allele count: 0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.803491559659501e-5
allele num: 55448
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African
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South Asian
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allele num: 14062
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Other
type: Population
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4162
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Latino
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e0

VQSLOD
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4100
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9310
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8020
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 54866
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 676
num of homozygotes: 0

South Asian
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allele count: 3
allele frequency: 2.144695453245639e-4
allele num: 13988
num of homozygotes: 0

InbreedingCoeff
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QD
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MQRankSum
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MQ
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FS
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
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SIO_000300: 1.06e0

BaseQRankSum
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SIO_000300: 8.9e-2

DP
type: SiteQuality
SIO_000300: 1.184131e6

VQSLOD
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SIO_000300: -7.858000000000001e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 9300
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 13986
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7596
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.825617058565795e-5
allele num: 54776
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4094
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 8008
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.184765e6

ClippingRankSum
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VQSLOD
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MQRankSum
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BaseQRankSum
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MQ
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QD
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FS
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ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 54586
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7574
num of homozygotes: 0

South Asian
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allele count: 5
allele frequency: 3.579610538373425e-4
allele num: 13968
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7992
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4076
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.45e-1

MQRankSum
type: SiteQuality
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DP
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SIO_000300: 1.176511e6

VQSLOD
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MQ
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SIO_000300: 6.0e1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

ReadPosRankSum
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SIO_000300: 3.12e-1

QD
type: SiteQuality
SIO_000300: 8.24e0

BaseQRankSum
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SIO_000300: -2.103e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 51258
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3740
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 2.359046945034206e-4
allele num: 8478
num of homozygotes: 0

African
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allele count: 40
allele frequency: 5.252100840336135e-3
allele num: 7616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.96e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.095e1

MQRankSum
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SIO_000300: 1.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.6e-2

DP
type: SiteQuality
SIO_000300: 1.074942e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3224
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45484
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.443834825295986e-4
allele num: 6926
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 568
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.477e1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
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ClippingRankSum
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.368e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.7e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2978
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 542
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.31728229132873e-5
allele num: 43154
num of homozygotes: 0

MQ
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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DP
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QD
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FS
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 514
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.437716347325825e-5
allele num: 41022
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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Latino
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MQ
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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MQRankSum
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VQSLOD
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QD
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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Other
type: Population
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Latino
type: Population
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allele frequency: 0.0e0
allele num: 6304
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European (Finnish)
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South Asian
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East Asian
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allele num: 5492
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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FS
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InbreedingCoeff
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MQRankSum
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QD
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MQ
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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African
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European (Finnish)
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South Asian
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East Asian
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Other
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QD
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MQ
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VQSLOD
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MQRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.040731791508457e-4
allele num: 11588
num of homozygotes: 0

DP
type: SiteQuality
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MQ
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FS
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QD
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 7.610929294466855e-5
allele num: 26278
num of homozygotes: 0

BaseQRankSum
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InbreedingCoeff
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QD
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MQ
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FS
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VQSLOD
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MQRankSum
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DP
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 3.812137846904544e-5
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
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BaseQRankSum
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VQSLOD
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FS
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MQRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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SIO_000300: 0.0e0

QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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East Asian
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allele frequency: 3.075030750307503e-4
allele num: 3252
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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QD
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MQRankSum
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DP
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SIO_000300: 6.61111e5

ClippingRankSum
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SIO_000300: 0.0e0

MQ
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SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1388
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 7.975117632985087e-5
allele num: 25078
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.41e-2

BaseQRankSum
type: SiteQuality
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MQ
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MQRankSum
type: SiteQuality
SIO_000300: 9.29e-1

VQSLOD
type: SiteQuality
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DP
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 23132
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2400
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South Asian
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allele count: 1
allele frequency: 1.001001001001001e-4
allele num: 9990
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.53e-1

InbreedingCoeff
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SIO_000300: -2.6e-2

BaseQRankSum
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DP
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MQ
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ClippingRankSum
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QD
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FS
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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East Asian
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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DP
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VQSLOD
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ClippingRankSum
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MQRankSum
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FS
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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African
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European (Non-Finnish)
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South Asian
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Other
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East Asian
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European (Finnish)
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FS
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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DP
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MQ
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BaseQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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European (Finnish)
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African
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Other
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South Asian
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East Asian
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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FS
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MQ
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MQRankSum
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BaseQRankSum
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VQSLOD
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7858
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.252252252252252e-3
allele num: 444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8060
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 90
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.933e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.73e-2

MQ
type: SiteQuality
SIO_000300: 5.855e1

MQRankSum
type: SiteQuality
SIO_000300: -7.93e-1

DP
type: SiteQuality
SIO_000300: 4.04641e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.926e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.71e1

VQSLOD
type: SiteQuality
SIO_000300: -3.494e0

GenotypeQuality
all individuals: 81
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7852
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7988
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 84
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.07e0

DP
type: SiteQuality
SIO_000300: 4.07083e5

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.68e-2

QD
type: SiteQuality
SIO_000300: 1.589e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 2294
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 72
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7890
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

South Asian
type: Population
allele count: 13
allele frequency: 1.653102746693795e-3
allele num: 7864
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.82e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.75e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-1

FS
type: SiteQuality
SIO_000300: 1.914e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

VQSLOD
type: SiteQuality
SIO_000300: 5.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.69e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

QD
type: SiteQuality
SIO_000300: 1.36e1

DP
type: SiteQuality
SIO_000300: 4.0374e5

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 113
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7858
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 664
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.257229067136032e-4
allele num: 7954
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.81e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.72e-2

FS
type: SiteQuality
SIO_000300: 1.394e0

DP
type: SiteQuality
SIO_000300: 4.04175e5

QD
type: SiteQuality
SIO_000300: 1.227e1

GenotypeQuality
all individuals: 31494
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 50
bin: 4.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7932
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2246
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.261e0

DP
type: SiteQuality
SIO_000300: 4.0751e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.660000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2280
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.256281407035176e-4
allele num: 7960
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.37e0

FS
type: SiteQuality
SIO_000300: 1.824e0

MQ
type: SiteQuality
SIO_000300: 5.445e1

MQRankSum
type: SiteQuality
SIO_000300: -7.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.84e-1

DP
type: SiteQuality
SIO_000300: 4.11235e5

VQSLOD
type: SiteQuality
SIO_000300: 8.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.58e-2

QD
type: SiteQuality
SIO_000300: 7.63e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.67e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7906
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 68
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8056
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 4.15296e5

VQSLOD
type: SiteQuality
SIO_000300: -1.109e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 6.41e0

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2364
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 5.031446540880503e-4
allele num: 7950
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8124
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 436
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 666
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 70
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.49e-2

DP
type: SiteQuality
SIO_000300: 4.19173e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

MQ
type: SiteQuality
SIO_000300: 5.728e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.97e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.128e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7942
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 8142
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.54e-2

DP
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.664e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.1e-2

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 8.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 395
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7958
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 4.317789291882556e-4
allele num: 2316
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7934
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.23e-1

DP
type: SiteQuality
SIO_000300: 3.96137e5

FS
type: SiteQuality
SIO_000300: 1.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.39e-1

QD
type: SiteQuality
SIO_000300: 9.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-2

MQ
type: SiteQuality
SIO_000300: 5.975e1

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32877
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1299
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 171
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 2.358490566037736e-3
allele num: 424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7958
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.520796571716663e-4
allele num: 7934
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2316
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.39e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

VQSLOD
type: SiteQuality
SIO_000300: 6.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 3.96137e5

QD
type: SiteQuality
SIO_000300: 9.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.15e-1

FS
type: SiteQuality
SIO_000300: 1.43e0

GenotypeQuality
all individuals: 2522
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5563
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.572327044025157e-3
allele num: 636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 414
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2254
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7910
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7794
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.85223e5

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.325e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

VQSLOD
type: SiteQuality
SIO_000300: -8.565e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.290000000000001e-2

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5916
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7806
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2232
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.183e0

MQRankSum
type: SiteQuality
SIO_000300: -9.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.3e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

QD
type: SiteQuality
SIO_000300: 7.54e0

DP
type: SiteQuality
SIO_000300: 3.82593e5

GenotypeQuality
all individuals: 222
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 88
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5593
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 108
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2226
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 414
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.284356537374775e-4
allele num: 7786
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.266143327424664e-4
allele num: 7898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.71e0

QD
type: SiteQuality
SIO_000300: 1.074e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.32e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.99e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

DP
type: SiteQuality
SIO_000300: 3.80829e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 245
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31852
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3600
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.273885350318471e-4
allele num: 7850
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2030
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.933e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.727e0

DP
type: SiteQuality
SIO_000300: 3.52065e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.770000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: -6.860000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e0

VQSLOD
type: SiteQuality
SIO_000300: -2.919e0

QD
type: SiteQuality
SIO_000300: 9.33e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.294e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 221
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3050
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4952
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1982
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7408
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.46341e5

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.246e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.770000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.16e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 106
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 719
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7802
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 5.230125523012552e-4
allele num: 1912
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 576
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.78e-1

DP
type: SiteQuality
SIO_000300: 3.29272e5

MQ
type: SiteQuality
SIO_000300: 5.518e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.98e-2

MQRankSum
type: SiteQuality
SIO_000300: 9.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-2

QD
type: SiteQuality
SIO_000300: 4.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

GenotypeQuality
all individuals: 217
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 5723
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3202
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7710
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1712
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.377006127808579e-4
allele num: 6854
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

FS
type: SiteQuality
SIO_000300: 3.094e0

QD
type: SiteQuality
SIO_000300: 1.705e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

DP
type: SiteQuality
SIO_000300: 2.97347e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.27e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.46e-1

GenotypeQuality
all individuals: 7854
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 796
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1103
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1977
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2108
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 532
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.307873397855088e-4
allele num: 7646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 172
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.1e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

VQSLOD
type: SiteQuality
SIO_000300: 8.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.71e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.793e0

MQRankSum
type: SiteQuality
SIO_000300: 1.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.429999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.391e1

DP
type: SiteQuality
SIO_000300: 2.81737e5

GenotypeQuality
all individuals: 5271
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10919
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4093
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1406
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3539
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15910
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.549452549209912e-5
allele num: 65942
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.71e-1

DP
type: SiteQuality
SIO_000300: 2.125821e6

MQRankSum
type: SiteQuality
SIO_000300: 6.29e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

QD
type: SiteQuality
SIO_000300: 1.304e1

GenotypeQuality
all individuals: 9094
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 577
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1913
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3539
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10919
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1406
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4093
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.732201628269531e-4
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65942
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15910
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.125821e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

QD
type: SiteQuality
SIO_000300: 1.304e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.56e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

GenotypeQuality
all individuals: 393
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10955
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1916
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3543
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9087
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20201
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15958
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65954
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.676e0

QD
type: SiteQuality
SIO_000300: 1.912e1

MQRankSum
type: SiteQuality
SIO_000300: -1.131e0

FS
type: SiteQuality
SIO_000300: 1.9789e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

DP
type: SiteQuality
SIO_000300: 2.126589e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 8.73e-1

GenotypeQuality
all individuals: 4095
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3541
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10976
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5270
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9085
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1912
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1403
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.329004329004329e-4
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15994
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65968
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.41e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.36e0

FS
type: SiteQuality
SIO_000300: 7.62e-1

QD
type: SiteQuality
SIO_000300: 1.409e1

VQSLOD
type: SiteQuality
SIO_000300: 1.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.126913e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.093e0

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1400
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5255
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9082
bin: 9.75e1
variant carriers: 1