17-42288256-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42288256
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 42288256
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 41194
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000390669
  ensembl transcript: ENST00000436088
  gene symbol: UBTF
  hgvsc: ENST00000436088.1:c.1263A>G
  hgvsp: ENST00000436088.1:c.1263A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000377231
  ensembl transcript: ENST00000393606
  gene symbol: UBTF
  hgvsc: ENST00000393606.3:c.1152A>G
  hgvsp: ENST00000393606.3:c.1152A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000435708
  ensembl transcript: ENST00000529383
  gene symbol: UBTF
  hgvsc: ENST00000529383.1:c.1263A>G
  hgvsp: ENST00000529383.1:c.1263A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000437180
  ensembl transcript: ENST00000533177
  gene symbol: UBTF
  hgvsc: ENST00000533177.1:c.1152A>G
  hgvsp: ENST00000533177.1:c.1152A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000432925
  ensembl transcript: ENST00000526094
  gene symbol: UBTF
  hgvsc: ENST00000526094.1:c.1152A>G
  hgvsp: ENST00000526094.1:c.1152A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431539
  ensembl transcript: ENST00000527034
  gene symbol: UBTF
  hgvsc: ENST00000527034.1:c.1152A>G
  hgvsp: ENST00000527034.1:c.1152A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000302640
  ensembl transcript: ENST00000302904
  gene symbol: UBTF
  hgvsc: ENST00000302904.4:c.1263A>G
  hgvsp: ENST00000302904.4:c.1263A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267394
  ensembl transcript: ENST00000586560
  gene symbol: CTB-175E5.7
  hgvsc: ENST00000586560.1:n.54-5203T>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000345297
  ensembl transcript: ENST00000343638
  gene symbol: UBTF
  hgvsc: ENST00000343638.5:c.1152A>G
  hgvsp: ENST00000343638.5:c.1152A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431295
  ensembl transcript: ENST00000529373
  gene symbol: UBTF
  hgvsc: ENST00000529373.1:c.24A>G
  hgvsp: ENST00000529373.1:c.24A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 4848
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34783
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3633
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 5.25e1
  variant carriers: 1
hgvs: p.Lys421Lys
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-42288259-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42288259
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 42288259
    reference: chr 17
allele count: 2
allele frequency: 4.631773969430292e-5
allele num: 43180
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000377231
  ensembl transcript: ENST00000393606
  gene symbol: UBTF
  hgvsc: ENST00000393606.3:c.1149G>A
  hgvsp: ENST00000393606.3:c.1149G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000345297
  ensembl transcript: ENST00000343638
  gene symbol: UBTF
  hgvsc: ENST00000343638.5:c.1149G>A
  hgvsp: ENST00000343638.5:c.1149G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000390669
  ensembl transcript: ENST00000436088
  gene symbol: UBTF
  hgvsc: ENST00000436088.1:c.1260G>A
  hgvsp: ENST00000436088.1:c.1260G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000437180
  ensembl transcript: ENST00000533177
  gene symbol: UBTF
  hgvsc: ENST00000533177.1:c.1149G>A
  hgvsp: ENST00000533177.1:c.1149G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431295
  ensembl transcript: ENST00000529373
  gene symbol: UBTF
  hgvsc: ENST00000529373.1:c.21G>A
  hgvsp: ENST00000529373.1:c.21G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267394
  ensembl transcript: ENST00000586560
  gene symbol: CTB-175E5.7
  hgvsc: ENST00000586560.1:n.54-5200C>T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000302640
  ensembl transcript: ENST00000302904
  gene symbol: UBTF
  hgvsc: ENST00000302904.4:c.1260G>A
  hgvsp: ENST00000302904.4:c.1260G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000432925
  ensembl transcript: ENST00000526094
  gene symbol: UBTF
  hgvsc: ENST00000526094.1:c.1149G>A
  hgvsp: ENST00000526094.1:c.1149G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431539
  ensembl transcript: ENST00000527034
  gene symbol: UBTF
  hgvsc: ENST00000527034.1:c.1149G>A
  hgvsp: ENST00000527034.1:c.1149G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000435708
  ensembl transcript: ENST00000529383
  gene symbol: UBTF
  hgvsc: ENST00000529383.1:c.1260G>A
  hgvsp: ENST00000529383.1:c.1260G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4311
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7873
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34301
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7316
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1137
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Glu420Glu
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD

17-42288265-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42288265
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 42288265
    reference: chr 17
allele count: 2
allele frequency: 4.117429077284144e-5
allele num: 48574
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000437180
  ensembl transcript: ENST00000533177
  gene symbol: UBTF
  hgvsc: ENST00000533177.1:c.1143G>A
  hgvsp: ENST00000533177.1:c.1143G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000302640
  ensembl transcript: ENST00000302904
  gene symbol: UBTF
  hgvsc: ENST00000302904.4:c.1254G>A
  hgvsp: ENST00000302904.4:c.1254G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000390669
  ensembl transcript: ENST00000436088
  gene symbol: UBTF
  hgvsc: ENST00000436088.1:c.1254G>A
  hgvsp: ENST00000436088.1:c.1254G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267394
  ensembl transcript: ENST00000586560
  gene symbol: CTB-175E5.7
  hgvsc: ENST00000586560.1:n.54-5194C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000432925
  ensembl transcript: ENST00000526094
  gene symbol: UBTF
  hgvsc: ENST00000526094.1:c.1143G>A
  hgvsp: ENST00000526094.1:c.1143G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431539
  ensembl transcript: ENST00000527034
  gene symbol: UBTF
  hgvsc: ENST00000527034.1:c.1143G>A
  hgvsp: ENST00000527034.1:c.1143G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000345297
  ensembl transcript: ENST00000343638
  gene symbol: UBTF
  hgvsc: ENST00000343638.5:c.1143G>A
  hgvsp: ENST00000343638.5:c.1143G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000377231
  ensembl transcript: ENST00000393606
  gene symbol: UBTF
  hgvsc: ENST00000393606.3:c.1143G>A
  hgvsp: ENST00000393606.3:c.1143G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431295
  ensembl transcript: ENST00000529373
  gene symbol: UBTF
  hgvsc: ENST00000529373.1:c.15G>A
  hgvsp: ENST00000529373.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000435708
  ensembl transcript: ENST00000529383
  gene symbol: UBTF
  hgvsc: ENST00000529383.1:c.1254G>A
  hgvsp: ENST00000529383.1:c.1254G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7450
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2257
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser418Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

17-42288283-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42288283
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 42288283
    reference: chr 17
allele count: 9
allele frequency: 1.33499466002136e-4
allele num: 67416
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000390669
  ensembl transcript: ENST00000436088
  gene symbol: UBTF
  hgvsc: ENST00000436088.1:c.1236G>A
  hgvsp: ENST00000436088.1:c.1236G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000345297
  ensembl transcript: ENST00000343638
  gene symbol: UBTF
  hgvsc: ENST00000343638.5:c.1125G>A
  hgvsp: ENST00000343638.5:c.1125G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000435708
  ensembl transcript: ENST00000529383
  gene symbol: UBTF
  hgvsc: ENST00000529383.1:c.1236G>A
  hgvsp: ENST00000529383.1:c.1236G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267394
  ensembl transcript: ENST00000586560
  gene symbol: CTB-175E5.7
  hgvsc: ENST00000586560.1:n.54-5176C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000432925
  ensembl transcript: ENST00000526094
  gene symbol: UBTF
  hgvsc: ENST00000526094.1:c.1125G>A
  hgvsp: ENST00000526094.1:c.1125G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000437180
  ensembl transcript: ENST00000533177
  gene symbol: UBTF
  hgvsc: ENST00000533177.1:c.1125G>A
  hgvsp: ENST00000533177.1:c.1125G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000302640
  ensembl transcript: ENST00000302904
  gene symbol: UBTF
  hgvsc: ENST00000302904.4:c.1236G>A
  hgvsp: ENST00000302904.4:c.1236G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431295
  ensembl transcript: ENST00000529373
  gene symbol: UBTF
  hgvsc: ENST00000529373.1:c.-4G>A
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000377231
  ensembl transcript: ENST00000393606
  gene symbol: UBTF
  hgvsc: ENST00000393606.3:c.1125G>A
  hgvsp: ENST00000393606.3:c.1125G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431539
  ensembl transcript: ENST00000527034
  gene symbol: UBTF
  hgvsc: ENST00000527034.1:c.1125G>A
  hgvsp: ENST00000527034.1:c.1125G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17676
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 24449
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6956
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1544
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser412Ser
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

17-42288284-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42288284
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 42288284
    reference: chr 17
allele count: 1
allele frequency: 1.424826171207113e-5
allele num: 70184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431539
  ensembl transcript: ENST00000527034
  gene symbol: UBTF
  hgvsc: ENST00000527034.1:c.1124C>T
  hgvsp: ENSP00000431539.1:p.Ser375Leu
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000302640
  ensembl transcript: ENST00000302904
  gene symbol: UBTF
  hgvsc: ENST00000302904.4:c.1235C>T
  hgvsp: ENSP00000302640.4:p.Ser412Leu
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267394
  ensembl transcript: ENST00000586560
  gene symbol: CTB-175E5.7
  hgvsc: ENST00000586560.1:n.54-5175G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000377231
  ensembl transcript: ENST00000393606
  gene symbol: UBTF
  hgvsc: ENST00000393606.3:c.1124C>T
  hgvsp: ENSP00000377231.3:p.Ser375Leu
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000435708
  ensembl transcript: ENST00000529383
  gene symbol: UBTF
  hgvsc: ENST00000529383.1:c.1235C>T
  hgvsp: ENSP00000435708.1:p.Ser412Leu
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000432925
  ensembl transcript: ENST00000526094
  gene symbol: UBTF
  hgvsc: ENST00000526094.1:c.1124C>T
  hgvsp: ENSP00000432925.1:p.Ser375Leu
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000437180
  ensembl transcript: ENST00000533177
  gene symbol: UBTF
  hgvsc: ENST00000533177.1:c.1124C>T
  hgvsp: ENSP00000437180.1:p.Ser375Leu
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431295
  ensembl transcript: ENST00000529373
  gene symbol: UBTF
  hgvsc: ENST00000529373.1:c.-5C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000345297
  ensembl transcript: ENST00000343638
  gene symbol: UBTF
  hgvsc: ENST00000343638.5:c.1124C>T
  hgvsp: ENSP00000345297.5:p.Ser375Leu
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000390669
  ensembl transcript: ENST00000436088
  gene symbol: UBTF
  hgvsc: ENST00000436088.1:c.1235C>T
  hgvsp: ENSP00000390669.1:p.Ser412Leu
  variant of: http://identifiers.org/hgnc/12511
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6706
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2576
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 616
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1934
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser412Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff

17-42288288-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42288288
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 42288288
    reference: chr 17
allele count: 1
allele frequency: 1.327316166710911e-5
allele num: 75340
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000302640
  ensembl transcript: ENST00000302904
  gene symbol: UBTF
  hgvsc: ENST00000302904.4:c.1231G>A
  hgvsp: ENSP00000302640.4:p.Val411Met
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000435708
  ensembl transcript: ENST00000529383
  gene symbol: UBTF
  hgvsc: ENST00000529383.1:c.1231G>A
  hgvsp: ENSP00000435708.1:p.Val411Met
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000432925
  ensembl transcript: ENST00000526094
  gene symbol: UBTF
  hgvsc: ENST00000526094.1:c.1120G>A
  hgvsp: ENSP00000432925.1:p.Val374Met
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000377231
  ensembl transcript: ENST00000393606
  gene symbol: UBTF
  hgvsc: ENST00000393606.3:c.1120G>A
  hgvsp: ENSP00000377231.3:p.Val374Met
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431295
  ensembl transcript: ENST00000529373
  gene symbol: UBTF
  hgvsc: ENST00000529373.1:c.-9G>A
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431539
  ensembl transcript: ENST00000527034
  gene symbol: UBTF
  hgvsc: ENST00000527034.1:c.1120G>A
  hgvsp: ENSP00000431539.1:p.Val374Met
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000390669
  ensembl transcript: ENST00000436088
  gene symbol: UBTF
  hgvsc: ENST00000436088.1:c.1231G>A
  hgvsp: ENSP00000390669.1:p.Val411Met
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267394
  ensembl transcript: ENST00000586560
  gene symbol: CTB-175E5.7
  hgvsc: ENST00000586560.1:n.54-5171C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000345297
  ensembl transcript: ENST00000343638
  gene symbol: UBTF
  hgvsc: ENST00000343638.5:c.1120G>A
  hgvsp: ENSP00000345297.5:p.Val374Met
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000437180
  ensembl transcript: ENST00000533177
  gene symbol: UBTF
  hgvsc: ENST00000533177.1:c.1120G>A
  hgvsp: ENSP00000437180.1:p.Val374Met
  variant of: http://identifiers.org/hgnc/12511
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21343
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20913
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6008
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2775
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1733
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val411Met
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

17-42288289-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42288289
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 42288289
    reference: chr 17
allele count: 2
allele frequency: 2.588058697171252e-5
allele num: 77278
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000377231
  ensembl transcript: ENST00000393606
  gene symbol: UBTF
  hgvsc: ENST00000393606.3:c.1119C>T
  hgvsp: ENST00000393606.3:c.1119C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000345297
  ensembl transcript: ENST00000343638
  gene symbol: UBTF
  hgvsc: ENST00000343638.5:c.1119C>T
  hgvsp: ENST00000343638.5:c.1119C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000302640
  ensembl transcript: ENST00000302904
  gene symbol: UBTF
  hgvsc: ENST00000302904.4:c.1230C>T
  hgvsp: ENST00000302904.4:c.1230C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431295
  ensembl transcript: ENST00000529373
  gene symbol: UBTF
  hgvsc: ENST00000529373.1:c.-10C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267394
  ensembl transcript: ENST00000586560
  gene symbol: CTB-175E5.7
  hgvsc: ENST00000586560.1:n.54-5170G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000435708
  ensembl transcript: ENST00000529383
  gene symbol: UBTF
  hgvsc: ENST00000529383.1:c.1230C>T
  hgvsp: ENST00000529383.1:c.1230C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000432925
  ensembl transcript: ENST00000526094
  gene symbol: UBTF
  hgvsc: ENST00000526094.1:c.1119C>T
  hgvsp: ENST00000526094.1:c.1119C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000437180
  ensembl transcript: ENST00000533177
  gene symbol: UBTF
  hgvsc: ENST00000533177.1:c.1119C>T
  hgvsp: ENST00000533177.1:c.1119C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000390669
  ensembl transcript: ENST00000436088
  gene symbol: UBTF
  hgvsc: ENST00000436088.1:c.1230C>T
  hgvsp: ENST00000436088.1:c.1230C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431539
  ensembl transcript: ENST00000527034
  gene symbol: UBTF
  hgvsc: ENST00000527034.1:c.1119C>T
  hgvsp: ENST00000527034.1:c.1119C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19949
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22303
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6146
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro410Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD

17-42288294-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42288294
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 42288294
    reference: chr 17
allele count: 1
allele frequency: 1.17799505242078e-5
allele num: 84890
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000302640
  ensembl transcript: ENST00000302904
  gene symbol: UBTF
  hgvsc: ENST00000302904.4:c.1225C>T
  hgvsp: ENSP00000302640.4:p.Arg409Trp
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431539
  ensembl transcript: ENST00000527034
  gene symbol: UBTF
  hgvsc: ENST00000527034.1:c.1114C>T
  hgvsp: ENSP00000431539.1:p.Arg372Trp
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000377231
  ensembl transcript: ENST00000393606
  gene symbol: UBTF
  hgvsc: ENST00000393606.3:c.1114C>T
  hgvsp: ENSP00000377231.3:p.Arg372Trp
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267394
  ensembl transcript: ENST00000586560
  gene symbol: CTB-175E5.7
  hgvsc: ENST00000586560.1:n.54-5165G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000390669
  ensembl transcript: ENST00000436088
  gene symbol: UBTF
  hgvsc: ENST00000436088.1:c.1225C>T
  hgvsp: ENSP00000390669.1:p.Arg409Trp
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431295
  ensembl transcript: ENST00000529373
  gene symbol: UBTF
  hgvsc: ENST00000529373.1:c.-15C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000345297
  ensembl transcript: ENST00000343638
  gene symbol: UBTF
  hgvsc: ENST00000343638.5:c.1114C>T
  hgvsp: ENSP00000345297.5:p.Arg372Trp
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000437180
  ensembl transcript: ENST00000533177
  gene symbol: UBTF
  hgvsc: ENST00000533177.1:c.1114C>T
  hgvsp: ENSP00000437180.1:p.Arg372Trp
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000432925
  ensembl transcript: ENST00000526094
  gene symbol: UBTF
  hgvsc: ENST00000526094.1:c.1114C>T
  hgvsp: ENSP00000432925.1:p.Arg372Trp
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000435708
  ensembl transcript: ENST00000529383
  gene symbol: UBTF
  hgvsc: ENST00000529383.1:c.1225C>T
  hgvsp: ENSP00000435708.1:p.Arg409Trp
  variant of: http://identifiers.org/hgnc/12511
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16413
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5514
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1477
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17849
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg409Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD

17-42288294-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42288294
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 42288294
    reference: chr 17
allele count: 2
allele frequency: 2.35599010484156e-5
allele num: 84890
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000390669
  ensembl transcript: ENST00000436088
  gene symbol: UBTF
  hgvsc: ENST00000436088.1:c.1225C>A
  hgvsp: ENST00000436088.1:c.1225C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431295
  ensembl transcript: ENST00000529373
  gene symbol: UBTF
  hgvsc: ENST00000529373.1:c.-15C>A
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431539
  ensembl transcript: ENST00000527034
  gene symbol: UBTF
  hgvsc: ENST00000527034.1:c.1114C>A
  hgvsp: ENST00000527034.1:c.1114C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000435708
  ensembl transcript: ENST00000529383
  gene symbol: UBTF
  hgvsc: ENST00000529383.1:c.1225C>A
  hgvsp: ENST00000529383.1:c.1225C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267394
  ensembl transcript: ENST00000586560
  gene symbol: CTB-175E5.7
  hgvsc: ENST00000586560.1:n.54-5165G>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000377231
  ensembl transcript: ENST00000393606
  gene symbol: UBTF
  hgvsc: ENST00000393606.3:c.1114C>A
  hgvsp: ENST00000393606.3:c.1114C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000345297
  ensembl transcript: ENST00000343638
  gene symbol: UBTF
  hgvsc: ENST00000343638.5:c.1114C>A
  hgvsp: ENST00000343638.5:c.1114C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000302640
  ensembl transcript: ENST00000302904
  gene symbol: UBTF
  hgvsc: ENST00000302904.4:c.1225C>A
  hgvsp: ENST00000302904.4:c.1225C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000437180
  ensembl transcript: ENST00000533177
  gene symbol: UBTF
  hgvsc: ENST00000533177.1:c.1114C>A
  hgvsp: ENST00000533177.1:c.1114C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000432925
  ensembl transcript: ENST00000526094
  gene symbol: UBTF
  hgvsc: ENST00000526094.1:c.1114C>A
  hgvsp: ENST00000526094.1:c.1114C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16413
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26074
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5514
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6862
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg409Arg
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

17-42288298-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42288298
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 42288298
    reference: chr 17
allele count: 1
allele frequency: 1.121478557329984e-5
allele num: 89168
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000345297
  ensembl transcript: ENST00000343638
  gene symbol: UBTF
  hgvsc: ENST00000343638.5:c.1110C>T
  hgvsp: ENST00000343638.5:c.1110C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431295
  ensembl transcript: ENST00000529373
  gene symbol: UBTF
  hgvsc: ENST00000529373.1:c.-19C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431539
  ensembl transcript: ENST00000527034
  gene symbol: UBTF
  hgvsc: ENST00000527034.1:c.1110C>T
  hgvsp: ENST00000527034.1:c.1110C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000377231
  ensembl transcript: ENST00000393606
  gene symbol: UBTF
  hgvsc: ENST00000393606.3:c.1110C>T
  hgvsp: ENST00000393606.3:c.1110C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000435708
  ensembl transcript: ENST00000529383
  gene symbol: UBTF
  hgvsc: ENST00000529383.1:c.1221C>T
  hgvsp: ENST00000529383.1:c.1221C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000302640
  ensembl transcript: ENST00000302904
  gene symbol: UBTF
  hgvsc: ENST00000302904.4:c.1221C>T
  hgvsp: ENST00000302904.4:c.1221C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000432925
  ensembl transcript: ENST00000526094
  gene symbol: UBTF
  hgvsc: ENST00000526094.1:c.1110C>T
  hgvsp: ENST00000526094.1:c.1110C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000390669
  ensembl transcript: ENST00000436088
  gene symbol: UBTF
  hgvsc: ENST00000436088.1:c.1221C>T
  hgvsp: ENST00000436088.1:c.1221C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267394
  ensembl transcript: ENST00000586560
  gene symbol: CTB-175E5.7
  hgvsc: ENST00000586560.1:n.54-5161G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000437180
  ensembl transcript: ENST00000533177
  gene symbol: UBTF
  hgvsc: ENST00000533177.1:c.1110C>T
  hgvsp: ENST00000533177.1:c.1110C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6948
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14515
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1357
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro407Pro
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

17-42288306-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42288306
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 42288306
    reference: chr 17
allele count: 2
allele frequency: 2.127795391195183e-5
allele num: 93994
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431295
  ensembl transcript: ENST00000529373
  gene symbol: UBTF
  hgvsc: ENST00000529373.1:c.-27G>A
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000432925
  ensembl transcript: ENST00000526094
  gene symbol: UBTF
  hgvsc: ENST00000526094.1:c.1102G>A
  hgvsp: ENSP00000432925.1:p.Glu368Lys
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000390669
  ensembl transcript: ENST00000436088
  gene symbol: UBTF
  hgvsc: ENST00000436088.1:c.1213G>A
  hgvsp: ENSP00000390669.1:p.Glu405Lys
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000302640
  ensembl transcript: ENST00000302904
  gene symbol: UBTF
  hgvsc: ENST00000302904.4:c.1213G>A
  hgvsp: ENSP00000302640.4:p.Glu405Lys
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000377231
  ensembl transcript: ENST00000393606
  gene symbol: UBTF
  hgvsc: ENST00000393606.3:c.1102G>A
  hgvsp: ENSP00000377231.3:p.Glu368Lys
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000437180
  ensembl transcript: ENST00000533177
  gene symbol: UBTF
  hgvsc: ENST00000533177.1:c.1102G>A
  hgvsp: ENSP00000437180.1:p.Glu368Lys
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431539
  ensembl transcript: ENST00000527034
  gene symbol: UBTF
  hgvsc: ENST00000527034.1:c.1102G>A
  hgvsp: ENSP00000431539.1:p.Glu368Lys
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000345297
  ensembl transcript: ENST00000343638
  gene symbol: UBTF
  hgvsc: ENST00000343638.5:c.1102G>A
  hgvsp: ENSP00000345297.5:p.Glu368Lys
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267394
  ensembl transcript: ENST00000586560
  gene symbol: CTB-175E5.7
  hgvsc: ENST00000586560.1:n.54-5153C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000435708
  ensembl transcript: ENST00000529383
  gene symbol: UBTF
  hgvsc: ENST00000529383.1:c.1213G>A
  hgvsp: ENSP00000435708.1:p.Glu405Lys
  variant of: http://identifiers.org/hgnc/12511
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5041
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7724
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12086
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1371
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu405Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

17-42288307-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42288307
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 42288307
    reference: chr 17
allele count: 2
allele frequency: 2.085766727849157e-5
allele num: 95888
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431539
  ensembl transcript: ENST00000527034
  gene symbol: UBTF
  hgvsc: ENST00000527034.1:c.1101C>G
  hgvsp: ENST00000527034.1:c.1101C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000345297
  ensembl transcript: ENST00000343638
  gene symbol: UBTF
  hgvsc: ENST00000343638.5:c.1101C>G
  hgvsp: ENST00000343638.5:c.1101C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000432925
  ensembl transcript: ENST00000526094
  gene symbol: UBTF
  hgvsc: ENST00000526094.1:c.1101C>G
  hgvsp: ENST00000526094.1:c.1101C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000377231
  ensembl transcript: ENST00000393606
  gene symbol: UBTF
  hgvsc: ENST00000393606.3:c.1101C>G
  hgvsp: ENST00000393606.3:c.1101C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000390669
  ensembl transcript: ENST00000436088
  gene symbol: UBTF
  hgvsc: ENST00000436088.1:c.1212C>G
  hgvsp: ENST00000436088.1:c.1212C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431295
  ensembl transcript: ENST00000529373
  gene symbol: UBTF
  hgvsc: ENST00000529373.1:c.-28C>G
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267394
  ensembl transcript: ENST00000586560
  gene symbol: CTB-175E5.7
  hgvsc: ENST00000586560.1:n.54-5152G>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000437180
  ensembl transcript: ENST00000533177
  gene symbol: UBTF
  hgvsc: ENST00000533177.1:c.1101C>G
  hgvsp: ENST00000533177.1:c.1101C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000302640
  ensembl transcript: ENST00000302904
  gene symbol: UBTF
  hgvsc: ENST00000302904.4:c.1212C>G
  hgvsp: ENST00000302904.4:c.1212C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000435708
  ensembl transcript: ENST00000529383
  gene symbol: UBTF
  hgvsc: ENST00000529383.1:c.1212C>G
  hgvsp: ENST00000529383.1:c.1212C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8034
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4827
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser404Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

17-42288313-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42288313
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 42288313
    reference: chr 17
allele count: 2
allele frequency: 1.972814614610665e-5
allele num: 101378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000435708
  ensembl transcript: ENST00000529383
  gene symbol: UBTF
  hgvsc: ENST00000529383.1:c.1206C>T
  hgvsp: ENST00000529383.1:c.1206C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267394
  ensembl transcript: ENST00000586560
  gene symbol: CTB-175E5.7
  hgvsc: ENST00000586560.1:n.54-5146G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000432925
  ensembl transcript: ENST00000526094
  gene symbol: UBTF
  hgvsc: ENST00000526094.1:c.1095C>T
  hgvsp: ENST00000526094.1:c.1095C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000345297
  ensembl transcript: ENST00000343638
  gene symbol: UBTF
  hgvsc: ENST00000343638.5:c.1095C>T
  hgvsp: ENST00000343638.5:c.1095C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000390669
  ensembl transcript: ENST00000436088
  gene symbol: UBTF
  hgvsc: ENST00000436088.1:c.1206C>T
  hgvsp: ENST00000436088.1:c.1206C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000302640
  ensembl transcript: ENST00000302904
  gene symbol: UBTF
  hgvsc: ENST00000302904.4:c.1206C>T
  hgvsp: ENST00000302904.4:c.1206C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000377231
  ensembl transcript: ENST00000393606
  gene symbol: UBTF
  hgvsc: ENST00000393606.3:c.1095C>T
  hgvsp: ENST00000393606.3:c.1095C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431295
  ensembl transcript: ENST00000529373
  gene symbol: UBTF
  hgvsc: ENST00000529373.1:c.-34C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000437180
  ensembl transcript: ENST00000533177
  gene symbol: UBTF
  hgvsc: ENST00000533177.1:c.1095C>T
  hgvsp: ENST00000533177.1:c.1095C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431539
  ensembl transcript: ENST00000527034
  gene symbol: UBTF
  hgvsc: ENST00000527034.1:c.1095C>T
  hgvsp: ENST00000527034.1:c.1095C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/12511
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33101
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8819
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2445
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8646
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1206C>T
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

17-42288323-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42288323
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 42288323
    reference: chr 17
allele count: 1
allele frequency: 9.369612472828123e-6
allele num: 106728
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000432925
  ensembl transcript: ENST00000526094
  gene symbol: UBTF
  hgvsc: ENST00000526094.1:c.1093-8C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431539
  ensembl transcript: ENST00000527034
  gene symbol: UBTF
  hgvsc: ENST00000527034.1:c.1093-8C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431295
  ensembl transcript: ENST00000529373
  gene symbol: UBTF
  hgvsc: ENST00000529373.1:c.-44C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000390669
  ensembl transcript: ENST00000436088
  gene symbol: UBTF
  hgvsc: ENST00000436088.1:c.1204-8C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000435708
  ensembl transcript: ENST00000529383
  gene symbol: UBTF
  hgvsc: ENST00000529383.1:c.1204-8C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000345297
  ensembl transcript: ENST00000343638
  gene symbol: UBTF
  hgvsc: ENST00000343638.5:c.1093-8C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000437180
  ensembl transcript: ENST00000533177
  gene symbol: UBTF
  hgvsc: ENST00000533177.1:c.1093-8C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000377231
  ensembl transcript: ENST00000393606
  gene symbol: UBTF
  hgvsc: ENST00000393606.3:c.1093-8C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267394
  ensembl transcript: ENST00000586560
  gene symbol: CTB-175E5.7
  hgvsc: ENST00000586560.1:n.54-5136G>A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000302640
  ensembl transcript: ENST00000302904
  gene symbol: UBTF
  hgvsc: ENST00000302904.4:c.1204-8C>T
  variant of: http://identifiers.org/hgnc/12511
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34803
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3885
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9475
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 817
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
hgvs: c.1204-8C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

17-42288326-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42288326
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 42288326
    reference: chr 17
allele count: 4
allele frequency: 3.720653346727685e-5
allele num: 107508
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267394
  ensembl transcript: ENST00000586560
  gene symbol: CTB-175E5.7
  hgvsc: ENST00000586560.1:n.54-5133G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000432925
  ensembl transcript: ENST00000526094
  gene symbol: UBTF
  hgvsc: ENST00000526094.1:c.1093-11C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431295
  ensembl transcript: ENST00000529373
  gene symbol: UBTF
  hgvsc: ENST00000529373.1:c.-47C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431539
  ensembl transcript: ENST00000527034
  gene symbol: UBTF
  hgvsc: ENST00000527034.1:c.1093-11C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000435708
  ensembl transcript: ENST00000529383
  gene symbol: UBTF
  hgvsc: ENST00000529383.1:c.1204-11C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000345297
  ensembl transcript: ENST00000343638
  gene symbol: UBTF
  hgvsc: ENST00000343638.5:c.1093-11C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000377231
  ensembl transcript: ENST00000393606
  gene symbol: UBTF
  hgvsc: ENST00000393606.3:c.1093-11C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000302640
  ensembl transcript: ENST00000302904
  gene symbol: UBTF
  hgvsc: ENST00000302904.4:c.1204-11C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000437180
  ensembl transcript: ENST00000533177
  gene symbol: UBTF
  hgvsc: ENST00000533177.1:c.1093-11C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000390669
  ensembl transcript: ENST00000436088
  gene symbol: UBTF
  hgvsc: ENST00000436088.1:c.1204-11C>T
  variant of: http://identifiers.org/hgnc/12511
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3199
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9674
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3887
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34708
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5837
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1273
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-42288329-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42288329
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 42288329
    reference: chr 17
allele count: 1
allele frequency: 9.217779252622458e-6
allele num: 108486
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000435708
  ensembl transcript: ENST00000529383
  gene symbol: UBTF
  hgvsc: ENST00000529383.1:c.1204-14C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000432925
  ensembl transcript: ENST00000526094
  gene symbol: UBTF
  hgvsc: ENST00000526094.1:c.1093-14C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000345297
  ensembl transcript: ENST00000343638
  gene symbol: UBTF
  hgvsc: ENST00000343638.5:c.1093-14C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267394
  ensembl transcript: ENST00000586560
  gene symbol: CTB-175E5.7
  hgvsc: ENST00000586560.1:n.54-5130G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000390669
  ensembl transcript: ENST00000436088
  gene symbol: UBTF
  hgvsc: ENST00000436088.1:c.1204-14C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431295
  ensembl transcript: ENST00000529373
  gene symbol: UBTF
  hgvsc: ENST00000529373.1:c.-50C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000302640
  ensembl transcript: ENST00000302904
  gene symbol: UBTF
  hgvsc: ENST00000302904.4:c.1204-14C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000377231
  ensembl transcript: ENST00000393606
  gene symbol: UBTF
  hgvsc: ENST00000393606.3:c.1093-14C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000437180
  ensembl transcript: ENST00000533177
  gene symbol: UBTF
  hgvsc: ENST00000533177.1:c.1093-14C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431539
  ensembl transcript: ENST00000527034
  gene symbol: UBTF
  hgvsc: ENST00000527034.1:c.1093-14C>T
  variant of: http://identifiers.org/hgnc/12511
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3804
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

17-42288332-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42288332
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 42288332
    reference: chr 17
allele count: 1
allele frequency: 9.152312789441891e-6
allele num: 109262
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000345297
  ensembl transcript: ENST00000343638
  gene symbol: UBTF
  hgvsc: ENST00000343638.5:c.1093-17C>G
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000432925
  ensembl transcript: ENST00000526094
  gene symbol: UBTF
  hgvsc: ENST00000526094.1:c.1093-17C>G
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000377231
  ensembl transcript: ENST00000393606
  gene symbol: UBTF
  hgvsc: ENST00000393606.3:c.1093-17C>G
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000302640
  ensembl transcript: ENST00000302904
  gene symbol: UBTF
  hgvsc: ENST00000302904.4:c.1204-17C>G
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267394
  ensembl transcript: ENST00000586560
  gene symbol: CTB-175E5.7
  hgvsc: ENST00000586560.1:n.54-5127G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000435708
  ensembl transcript: ENST00000529383
  gene symbol: UBTF
  hgvsc: ENST00000529383.1:c.1204-17C>G
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431295
  ensembl transcript: ENST00000529373
  gene symbol: UBTF
  hgvsc: ENST00000529373.1:c.-53C>G
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000390669
  ensembl transcript: ENST00000436088
  gene symbol: UBTF
  hgvsc: ENST00000436088.1:c.1204-17C>G
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431539
  ensembl transcript: ENST00000527034
  gene symbol: UBTF
  hgvsc: ENST00000527034.1:c.1093-17C>G
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000437180
  ensembl transcript: ENST00000533177
  gene symbol: UBTF
  hgvsc: ENST00000533177.1:c.1093-17C>G
  variant of: http://identifiers.org/hgnc/12511
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5030
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1896
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34979
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3424
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10135
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2229
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD

17-42288333-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 42288333
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 42288333
    reference: chr 17
allele count: 1
allele frequency: 9.150302875025163e-6
allele num: 109286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431295
  ensembl transcript: ENST00000529373
  gene symbol: UBTF
  hgvsc: ENST00000529373.1:c.-54C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000435708
  ensembl transcript: ENST00000529383
  gene symbol: UBTF
  hgvsc: ENST00000529383.1:c.1204-18C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000431539
  ensembl transcript: ENST00000527034
  gene symbol: UBTF
  hgvsc: ENST00000527034.1:c.1093-18C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000437180
  ensembl transcript: ENST00000533177
  gene symbol: UBTF
  hgvsc: ENST00000533177.1:c.1093-18C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000302640
  ensembl transcript: ENST00000302904
  gene symbol: UBTF
  hgvsc: ENST00000302904.4:c.1204-18C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000432925
  ensembl transcript: ENST00000526094
  gene symbol: UBTF
  hgvsc: ENST00000526094.1:c.1093-18C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000267394
  ensembl transcript: ENST00000586560
  gene symbol: CTB-175E5.7
  hgvsc: ENST00000586560.1:n.54-5126G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000345297
  ensembl transcript: ENST00000343638
  gene symbol: UBTF
  hgvsc: ENST00000343638.5:c.1093-18C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000377231
  ensembl transcript: ENST00000393606
  gene symbol: UBTF
  hgvsc: ENST00000393606.3:c.1093-18C>T
  variant of: http://identifiers.org/hgnc/12511
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108312
  ensembl protein: ENSP00000390669
  ensembl transcript: ENST00000436088
  gene symbol: UBTF
  hgvsc: ENST00000436088.1:c.1204-18C>T
  variant of: http://identifiers.org/hgnc/12511
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10064
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4960
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3795
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1261
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

19-6924879-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924879
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924879
    reference: chr 19
allele count: 1
allele frequency: 8.29393713195654e-6
allele num: 120570
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1826A>G
  hgvsp: ENSP00000370811.4:p.Asn609Ser
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1451A>G
  hgvsp: ENSP00000405974.2:p.Asn484Ser
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1498A>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1982A>G
  hgvsp: ENSP00000311545.3:p.Asn661Ser
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1559A>G
  hgvsp: ENSP00000370814.4:p.Asn520Ser
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13263
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4456
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23079
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9488
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5132
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32840
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asn661Ser
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

19-6924882-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924882
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924882
    reference: chr 19
allele count: 15
allele frequency: 1.245019920318725e-4
allele num: 120480
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1454A>T
  hgvsp: ENSP00000405974.2:p.Lys485Met
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1562A>T
  hgvsp: ENSP00000370814.4:p.Lys521Met
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1829A>T
  hgvsp: ENSP00000370811.4:p.Lys610Met
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1985A>T
  hgvsp: ENSP00000311545.3:p.Lys662Met
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1495A>T
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13089
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23022
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4452
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9462
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32749
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2327
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys662Met
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-6924890-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924890
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924890
    reference: chr 19
allele count: 11
allele frequency: 9.185190133435763e-5
allele num: 119758
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1487A>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+7A>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+7A>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+7A>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+7A>C
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11970
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2446
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11988
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4414
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2079
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9126
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5127
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 3176
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2217
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3526
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
hgvs: c.1986+7A>C
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

19-6924892-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924892
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924892
    reference: chr 19
allele count: 3
allele frequency: 2.508528998595224e-5
allele num: 119592
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+9C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1485C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+9C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+9C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+9C>T
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11823
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11758
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2469
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3511
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1223
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 849
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5119
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3167
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

19-6924893-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924893
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924893
    reference: chr 19
allele count: 2
allele frequency: 1.67319211591875e-5
allele num: 119532
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+10G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+10G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1484G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+10G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+10G>A
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21675
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5116
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29384
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2304
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3501
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1223
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum

19-6924893-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924893
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924893
    reference: chr 19
allele count: 1
allele frequency: 8.365960579593749e-6
allele num: 119532
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+10G>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+10G>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+10G>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+10G>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1484G>C
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21675
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2304
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3157
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29384
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2584
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5116
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

19-6924893-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924893
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924893
    reference: chr 19
allele count: 1
allele frequency: 8.365960579593749e-6
allele num: 119532
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+10G>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+10G>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+10G>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+10G>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1484G>T
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21675
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2584
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2304
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3501
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29384
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1223
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8988
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

19-6924896-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924896
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924896
    reference: chr 19
allele count: 3
allele frequency: 2.514837541494819e-5
allele num: 119292
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1481C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+13C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+13C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+13C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+13C>T
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4350
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21270
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11512
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8787
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1029
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28329
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2863
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1223
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3479
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2298
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1151
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD

19-6924897-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924897
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924897
    reference: chr 19
allele count: 7
allele frequency: 5.868249417366665e-5
allele num: 119286
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+14G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+14G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1480G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+14G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+14G>A
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11427
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11586
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4336
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2899
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8757
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3119
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1222
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1074
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28767
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2292
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/19-6924900-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924900
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924900
    reference: chr 19
allele count: 1
allele frequency: 8.399126490844953e-6
allele num: 119060
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+17C>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+17C>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+17C>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+17C>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1477C>A
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20851
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3864
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3441
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2279
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1216
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3091
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3163
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1024
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5106
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1220
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1346
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ

19-6924900-CTGTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924900
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924896
    reference: chr 19
allele count: 2
allele frequency: 1.679825298168991e-5
allele num: 119060
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+19_1830+22delGTGT
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+19_1455+22delGTGT
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+19_1563+22delGTGT
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+19_1986+22delGTGT
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1475_1792-1472delGTGT
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3864
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20851
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3163
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1024
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1220
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3441
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1216
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8677
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1346
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: CTGTG
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

19-6924905-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924905
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924905
    reference: chr 19
allele count: 1
allele frequency: 8.425309630128907e-6
allele num: 118690
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+22T>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1472T>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+22T>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+22T>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+22T>A
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2959
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4945
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10922
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4273
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3750
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2238
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3349
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3006
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1959
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8432
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1211
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

19-6924905-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924905
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924905
    reference: chr 19
allele count: 1
allele frequency: 8.425309630128907e-6
allele num: 118690
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+22T>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+22T>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+22T>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+22T>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1472T>G
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2959
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4945
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10922
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4273
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3750
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25601
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8432
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3006
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5089
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/19-6924906-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924906
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924906
    reference: chr 19
allele count: 1
allele frequency: 8.439958137807636e-6
allele num: 118484
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+23C>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1471C>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+23C>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+23C>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+23C>A
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4078
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5628
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10762
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4254
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18953
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9786
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2206
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4078
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5087
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3173
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2774
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1354
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2488
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1735
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1379
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

19-6924907-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924907
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924907
    reference: chr 19
allele count: 1
allele frequency: 8.443806467955754e-6
allele num: 118430
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+24C>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+24C>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+24C>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+24C>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1470C>G
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4038
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5646
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9882
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10613
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7465
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1874
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1201
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23718
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1723
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2760
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1003
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 879
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5086
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-6924913-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924913
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924913
    reference: chr 19
allele count: 17
allele frequency: 1.437729402412002e-4
allele num: 118242
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+30A>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+30A>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1464A>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+30A>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+30A>C
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4512
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9905
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4102
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6011
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18749
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10088
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3088
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2004
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1865
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2662
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25023
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4394
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-6924913-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924913
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924913
    reference: chr 19
allele count: 1
allele frequency: 8.457231778894133e-6
allele num: 118242
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+30A>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+30A>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+30A>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1464A>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+30A>T
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9905
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4512
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6011
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10088
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4102
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2692
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5084
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2662
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 985
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3088
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2004
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4394
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1865
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum

19-6924915-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924915
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924915
    reference: chr 19
allele count: 1
allele frequency: 8.473427331887202e-6
allele num: 118016
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1462G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+32G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+32G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+32G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+32G>A
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5531
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9891
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9547
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18052
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2254
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2143
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2968
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7173
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3068
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2655
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

19-6924915-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924915
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924915
    reference: chr 19
allele count: 17
allele frequency: 1.440482646420824e-4
allele num: 118016
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+32G>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+32G>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+32G>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+32G>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1462G>T
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18052
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5531
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9891
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9547
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7173
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2655
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2968
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2254
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4506
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3068
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5082
  bin: 9.75e1
  variant carriers: 17
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

19-6924917-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924917
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924917
    reference: chr 19
allele count: 1
allele frequency: 8.493867427717188e-6
allele num: 117732
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+34C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1460C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+34C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+34C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+34C>T
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9366
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16562
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7778
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20560
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2428
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3561
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5065
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1147
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2596
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3064
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1237
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4589
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/19-6924919-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924919
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924919
    reference: chr 19
allele count: 7
allele frequency: 5.951773628541305e-5
allele num: 117612
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+36C>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1458C>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+36C>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+36C>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+36C>A
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9231
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3994
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7747
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16557
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6389
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4634
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3561
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2438
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3008
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1230
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1187
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3060
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2142
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

19-6924921-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924921
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924921
    reference: chr 19
allele count: 81
allele frequency: 6.890919299678424e-4
allele num: 117546
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+38T>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+38T>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+38T>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+38T>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1456T>C
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16204
  bin: 2.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8218
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6425
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3954
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 9226
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9093
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2487
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3682
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1341
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5131
  bin: 9.75e1
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 4692
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6583
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3218
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1180
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2132
  bin: 8.25e1
  variant carriers: 1
num of homozygotes: 1
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

19-6924922-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924922
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924922
    reference: chr 19
allele count: 54
allele frequency: 4.604993860008187e-4
allele num: 117264
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+39C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+39C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+39C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1455C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+39C>T
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6398
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15216
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8852
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1971
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9264
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9375
  bin: 2.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 1805
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4641
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2519
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6372
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1688
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2972
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3907
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5103
  bin: 9.75e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3661
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

19-6924928-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924928
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924928
    reference: chr 19
allele count: 1
allele frequency: 8.571624494274155e-6
allele num: 116664
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1449C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+45C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+45C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+45C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+45C>T
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6328
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11371
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3862
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13169
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9984
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8105
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2713
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2470
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4226
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4542
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1174
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15520
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3399
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2945
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5058
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5736
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

19-6924929-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924929
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924929
    reference: chr 19
allele count: 3
allele frequency: 2.578959132094287e-5
allele num: 116326
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+46C>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+46C>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1448C>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+46C>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+46C>G
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3847
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6259
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12436
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7835
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12381
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9967
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5516
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2400
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2480
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2101
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4173
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4605
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13177
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2748
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4353
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

19-6924930-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924930
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924930
    reference: chr 19
allele count: 1
allele frequency: 8.624555835374478e-6
allele num: 115948
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+47C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+47C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1447C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+47C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+47C>T
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2069
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6234
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9938
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12137
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3819
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2910
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4191
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4341
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5360
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4546
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2786
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 944
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 759
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2385
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4676
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3351
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-6924931-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6924931
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6924931
    reference: chr 19
allele count: 17
allele frequency: 1.494742025111666e-4
allele num: 113732
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-1446A>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1986+48A>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1455+48A>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1830+48A>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1563+48A>C
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11982
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9986
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7424
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13142
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6250
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1971
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2207
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4351
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4780
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2757
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1052
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2707
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1967
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4956
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 4855
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1278
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3734
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

19-6926326-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926326
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926326
    reference: chr 19
allele count: 3
allele frequency: 2.741177975548692e-5
allele num: 109442
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1987-51C>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-51C>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1456-51C>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1564-51C>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1831-51C>G
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11181
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14966
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11947
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4556
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7016
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2305
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4957
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3435
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5218
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6431
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2209
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1348
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9651
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4908
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4450
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD

19-6926326-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926326
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926326
    reference: chr 19
allele count: 4112
allele frequency: 3.757241278485408e-2
allele num: 109442
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1564-51C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-51C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1456-51C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1831-51C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1987-51C>T
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11947
  bin: 1.25e1
  variant carriers: 943
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 14966
  bin: 1.75e1
  variant carriers: 1178
genotype depth: GenotypeDepth
  all individuals: 7016
  bin: 2.75e1
  variant carriers: 387
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 5.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 5.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 4.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3453
  bin: 3.25e1
  variant carriers: 195
genotype depth: GenotypeDepth
  all individuals: 4556
  bin: 7.5e0
  variant carriers: 264
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 4.25e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 2.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 9.75e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 3.75e1
  variant carriers: 140
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 11181
  bin: 2.25e1
  variant carriers: 724
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 1348
  bin: 1.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 8.75e1
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 3909
  bin: 6.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 6431
  bin: 6.25e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 4450
  bin: 3.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 2305
  bin: 5.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 7.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2209
  bin: 7.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 1.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 2.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 2444
  bin: 2.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 7.25e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 2915
  bin: 4.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 8.25e1
  variant carriers: 54
genotype quality: GenotypeQuality
  all individuals: 4957
  bin: 3.75e1
  variant carriers: 20
num of homozygotes: 153
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP

19-6926327-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926327
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926327
    reference: chr 19
allele count: 1
allele frequency: 9.088926052497636e-6
allele num: 110024
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1564-50G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1831-50G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1987-50G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-50G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1456-50G>A
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11839
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12312
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4494
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13768
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4051
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 775
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3148
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4362
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6408
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4435
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4734
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2594
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5536
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1647
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP

19-6926330-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926330
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926330
    reference: chr 19
allele count: 19
allele frequency: 1.715730540003612e-4
allele num: 110740
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-47T>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1456-47T>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1987-47T>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1831-47T>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1564-47T>C
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14940
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11730
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7373
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11013
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12385
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4825
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4421
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5258
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2613
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2537
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4659
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1894
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1707
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

19-6926336-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926336
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926336
    reference: chr 19
allele count: 1
allele frequency: 9.017620430320846e-6
allele num: 110894
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1987-41C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1564-41C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1831-41C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1456-41C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-41C>T
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10648
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4538
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3842
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7970
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 936
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4750
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17858
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4569
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 828
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4357
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1779
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2232
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2551
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2425
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-6926340-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926340
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926340
    reference: chr 19
allele count: 15
allele frequency: 1.347345728914039e-4
allele num: 111330
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-37G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1831-37G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1564-37G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1456-37G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1987-37G>A
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4476
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8662
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9019
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23011
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2117
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3627
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2772
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1928
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2230
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3892
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1531
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1067
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6473
  bin: 9.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 5311
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum

19-6926341-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926341
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926341
    reference: chr 19
allele count: 3
allele frequency: 2.690679486259597e-5
allele num: 111496
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1831-36G>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1987-36G>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1564-36G>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-36G>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1456-36G>C
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23606
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3784
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8608
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8792
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4167
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2164
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5381
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2163
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4694
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3420
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1368
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

19-6926355-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926355
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926355
    reference: chr 19
allele count: 32115
allele frequency: 2.749195315710177e-1
allele num: 116816
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1987-22T>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1456-22T>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1564-22T>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1831-22T>C
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-22T>C
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 1.75e1
  variant carriers: 1899
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 5.75e1
  variant carriers: 740
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 1.25e1
  variant carriers: 661
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.75e1
  variant carriers: 153
genotype depth: GenotypeDepth
  all individuals: 19990
  bin: 2.25e1
  variant carriers: 3530
genotype depth: GenotypeDepth
  all individuals: 4407
  bin: 3.75e1
  variant carriers: 3297
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.75e1
  variant carriers: 219
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 9.75e1
  variant carriers: 1460
genotype depth: GenotypeDepth
  all individuals: 11212
  bin: 2.75e1
  variant carriers: 4664
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 7.25e1
  variant carriers: 276
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 7.5e0
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.75e1
  variant carriers: 368
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 5.25e1
  variant carriers: 912
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 4.75e1
  variant carriers: 1500
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.25e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 2884
  bin: 4.25e1
  variant carriers: 2275
genotype depth: GenotypeDepth
  all individuals: 7505
  bin: 3.25e1
  variant carriers: 4285
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 6.25e1
  variant carriers: 500
genotype quality: GenotypeQuality
  all individuals: 16123
  bin: 6.25e1
  variant carriers: 262
genotype quality: GenotypeQuality
  all individuals: 1547
  bin: 8.25e1
  variant carriers: 326
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 3.25e1
  variant carriers: 62
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 4.75e1
  variant carriers: 132
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 4.25e1
  variant carriers: 96
genotype quality: GenotypeQuality
  all individuals: 1651
  bin: 7.25e1
  variant carriers: 159
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.25e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 3.75e1
  variant carriers: 95
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 27386
  bin: 9.75e1
  variant carriers: 24408
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 2.5e0
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 1949
  bin: 2.25e1
  variant carriers: 51
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 7.5e0
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 5.75e1
  variant carriers: 130
genotype quality: GenotypeQuality
  all individuals: 3989
  bin: 6.75e1
  variant carriers: 275
num of homozygotes: 5167
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

19-6926355-TGC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926355
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926353
    reference: chr 19
allele count: 1
allele frequency: 8.560471168333105e-6
allele num: 116816
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1831-19_1831-18delGC
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1564-19_1564-18delGC
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-19_1792-18delGC
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1456-19_1456-18delGC
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1987-19_1987-18delGC
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4407
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2884
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11212
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3989
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 948
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16123
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1949
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: TGC
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

19-6926356-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926356
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926356
    reference: chr 19
allele count: 1
allele frequency: 8.489685032685287e-6
allele num: 117790
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-21G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1987-21G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1831-21G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1456-21G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1564-21G>A
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7639
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11184
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3339
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2796
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15684
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3910
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2484
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18066
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 846
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/19-6926357-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926357
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926357
    reference: chr 19
allele count: 1
allele frequency: 8.481188723411473e-6
allele num: 117908
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1564-20C>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-20C>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1456-20C>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1987-20C>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1831-20C>A
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4554
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20078
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11310
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5737
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1755
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18241
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15693
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 528
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ

19-6926357-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926357
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926357
    reference: chr 19
allele count: 8
allele frequency: 6.784950978729179e-5
allele num: 117908
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1564-20C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1831-20C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1456-20C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1987-20C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-20C>T
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4554
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11310
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7709
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20078
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1710
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18241
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2813
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3907
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1755
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

19-6926358-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926358
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926358
    reference: chr 19
allele count: 2585
allele frequency: 2.187378361454755e-2
allele num: 118178
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1831-19G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1456-19G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1564-19G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1987-19G>A
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-19G>A
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 5.25e1
  variant carriers: 121
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 7.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 1.75e1
  variant carriers: 125
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 3019
  bin: 4.25e1
  variant carriers: 249
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 1.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 7892
  bin: 3.25e1
  variant carriers: 369
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 9.75e1
  variant carriers: 190
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 3.75e1
  variant carriers: 313
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.75e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 11442
  bin: 2.75e1
  variant carriers: 342
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 6.25e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 4.75e1
  variant carriers: 191
genotype depth: GenotypeDepth
  all individuals: 20020
  bin: 2.25e1
  variant carriers: 251
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1650
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3747
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2337
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2740
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1565
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18231
  bin: 6.25e1
  variant carriers: 3
num of homozygotes: 58
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

19-6926358-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926358
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926358
    reference: chr 19
allele count: 16
allele frequency: 1.353889894904297e-4
allele num: 118178
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1456-19G>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1564-19G>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1987-19G>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1831-19G>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-19G>T
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11442
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 20020
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7892
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3019
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2337
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18231
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5656
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3204
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1565
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2740
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3747
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

19-6926359-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926359
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926359
    reference: chr 19
allele count: 1
allele frequency: 8.436967416431838e-6
allele num: 118526
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1831-18C>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1987-18C>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1456-18C>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1564-18C>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-18C>G
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20236
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11485
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2546
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1469
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3428
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1781
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2882
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5953
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18585
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff

19-6926363-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926363
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926363
    reference: chr 19
allele count: 1
allele frequency: 8.39066957543212e-6
allele num: 119180
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1987-14C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1456-14C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1564-14C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1831-14C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-14C>T
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21078
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11692
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3027
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2564
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3487
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6071
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19482
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1797
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum

19-6926370-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926370
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926370
    reference: chr 19
allele count: 1
allele frequency: 8.331250520703158e-6
allele num: 120030
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1831-7C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1564-7C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-7C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1987-7C>T
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1456-7C>T
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12086
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8365
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1834
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2990
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20765
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6289
  bin: 6.75e1
  variant carriers: 0
hgvs: c.1987-7C>T
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

19-6926373-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926373
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926373
    reference: chr 19
allele count: 7
allele frequency: 5.818109280715461e-5
allele num: 120314
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1456-4C>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1831-4C>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1564-4C>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1792-4C>G
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1987-4C>G
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8420
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12188
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4752
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22043
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3604
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3019
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6335
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 2.75e1
  variant carriers: 0
hgvs: c.1987-4C>G
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

19-6926378-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926378
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926378
    reference: chr 19
allele count: 33369
allele frequency: 2.767741614412262e-1
allele num: 120564
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1565T>C
  hgvsp: ENSP00000370814.4:p.Met522Thr
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1793T>C
  hgvsp: ENSP00000250572.7:p.Met598Thr
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1988T>C
  hgvsp: ENSP00000311545.3:p.Met663Thr
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1832T>C
  hgvsp: ENSP00000370811.4:p.Met611Thr
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1457T>C
  hgvsp: ENSP00000405974.2:p.Met486Thr
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.75e1
  variant carriers: 256
genotype depth: GenotypeDepth
  all individuals: 8821
  bin: 2.75e1
  variant carriers: 1374
genotype depth: GenotypeDepth
  all individuals: 3012
  bin: 9.75e1
  variant carriers: 2726
genotype depth: GenotypeDepth
  all individuals: 4318
  bin: 3.75e1
  variant carriers: 3060
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 7.25e1
  variant carriers: 894
genotype depth: GenotypeDepth
  all individuals: 6153
  bin: 3.25e1
  variant carriers: 2266
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 6.75e1
  variant carriers: 1146
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 8.25e1
  variant carriers: 540
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 17744
  bin: 2.25e1
  variant carriers: 627
genotype depth: GenotypeDepth
  all individuals: 3862
  bin: 4.75e1
  variant carriers: 3444
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 5.75e1
  variant carriers: 2201
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 3106
  bin: 5.25e1
  variant carriers: 2829
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 9.25e1
  variant carriers: 337
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 6.25e1
  variant carriers: 1591
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.75e1
  variant carriers: 655
genotype depth: GenotypeDepth
  all individuals: 4194
  bin: 4.25e1
  variant carriers: 3463
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.75e1
  variant carriers: 403
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.5e0
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 17544
  bin: 6.25e1
  variant carriers: 51
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 2286
  bin: 7.75e1
  variant carriers: 118
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 4352
  bin: 6.75e1
  variant carriers: 81
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 5.25e1
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 6
hgvs: p.Met663Thr
num of homozygotes: 5534
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

19-6926379-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926379
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926379
    reference: chr 19
allele count: 2
allele frequency: 1.654423929587718e-5
allele num: 120888
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1458G>A
  hgvsp: ENSP00000405974.2:p.Met486Ile
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1833G>A
  hgvsp: ENSP00000370811.4:p.Met611Ile
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1794G>A
  hgvsp: ENSP00000250572.7:p.Met598Ile
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1989G>A
  hgvsp: ENSP00000311545.3:p.Met663Ile
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1566G>A
  hgvsp: ENSP00000370814.4:p.Met522Ile
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18173
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11996
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9255
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1885
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6747
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21913
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2727
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Met663Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum

http://identifiers.org/exac.variant/19-6926385-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926385
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926385
    reference: chr 19
allele count: 1
allele frequency: 8.260776182530111e-6
allele num: 121054
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1572C>A
  hgvsp: ENSP00000370814.4:p.Cys524Ter
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1839C>A
  hgvsp: ENSP00000370811.4:p.Cys613Ter
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1995C>A
  hgvsp: ENSP00000311545.3:p.Cys665Ter
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1464C>A
  hgvsp: ENSP00000405974.2:p.Cys488Ter
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1800C>A
  hgvsp: ENSP00000250572.7:p.Cys600Ter
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12118
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5891
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18217
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22148
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1884
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3223
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3609
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4380
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6777
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Cys665Ter
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum

19-6926385-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926385
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926385
    reference: chr 19
allele count: 1
allele frequency: 8.260776182530111e-6
allele num: 121054
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1464C>G
  hgvsp: ENSP00000405974.2:p.Cys488Trp
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1572C>G
  hgvsp: ENSP00000370814.4:p.Cys524Trp
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1995C>G
  hgvsp: ENSP00000311545.3:p.Cys665Trp
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1800C>G
  hgvsp: ENSP00000250572.7:p.Cys600Trp
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1839C>G
  hgvsp: ENSP00000370811.4:p.Cys613Trp
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5891
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12118
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18217
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6777
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3223
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2724
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22148
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Cys665Trp
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

19-6926385-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926385
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926385
    reference: chr 19
allele count: 1
allele frequency: 8.260776182530111e-6
allele num: 121054
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1464C>T
  hgvsp: ENST00000450315.3:c.1464C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1800C>T
  hgvsp: ENST00000250572.8:c.1800C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1839C>T
  hgvsp: ENST00000381404.4:c.1839C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1572C>T
  hgvsp: ENST00000381407.5:c.1572C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1995C>T
  hgvsp: ENST00000312053.4:c.1995C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12118
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5891
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18217
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2724
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4380
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22148
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6777
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3609
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Cys665Cys
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

19-6926386-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926386
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926386
    reference: chr 19
allele count: 1
allele frequency: 8.256274768824306e-6
allele num: 121120
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1840G>A
  hgvsp: ENSP00000370811.4:p.Ala614Thr
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1573G>A
  hgvsp: ENSP00000370814.4:p.Ala525Thr
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1801G>A
  hgvsp: ENSP00000250572.7:p.Ala601Thr
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1465G>A
  hgvsp: ENSP00000405974.2:p.Ala489Thr
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.1996G>A
  hgvsp: ENSP00000311545.3:p.Ala666Thr
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18236
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4336
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5889
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12136
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1887
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3612
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3228
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22273
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4383
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2725
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6802
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala666Thr
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-6926394-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926394
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926394
    reference: chr 19
allele count: 2
allele frequency: 1.649647800194658e-5
allele num: 121238
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.2004C>T
  hgvsp: ENST00000312053.4:c.2004C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1581C>T
  hgvsp: ENST00000381407.5:c.1581C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1473C>T
  hgvsp: ENST00000450315.3:c.1473C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1848C>T
  hgvsp: ENST00000381404.4:c.1848C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1809C>T
  hgvsp: ENST00000250572.8:c.1809C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5896
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18276
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9381
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2725
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3615
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15209
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Ile668Ile
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

19-6926395-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926395
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926395
    reference: chr 19
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1474G>A
  hgvsp: ENSP00000405974.2:p.Ala492Thr
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1849G>A
  hgvsp: ENSP00000370811.4:p.Ala617Thr
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.2005G>A
  hgvsp: ENSP00000311545.3:p.Ala669Thr
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1582G>A
  hgvsp: ENSP00000370814.4:p.Ala528Thr
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1810G>A
  hgvsp: ENSP00000250572.7:p.Ala604Thr
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5897
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3255
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2724
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15208
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala669Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

19-6926395-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926395
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926395
    reference: chr 19
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1582G>T
  hgvsp: ENSP00000370814.4:p.Ala528Ser
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1810G>T
  hgvsp: ENSP00000250572.7:p.Ala604Ser
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1474G>T
  hgvsp: ENSP00000405974.2:p.Ala492Ser
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1849G>T
  hgvsp: ENSP00000370811.4:p.Ala617Ser
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.2005G>T
  hgvsp: ENSP00000311545.3:p.Ala669Ser
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5897
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1889
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3255
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4410
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22497
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala669Ser
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

19-6926396-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6926396
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 6926396
    reference: chr 19
allele count: 204
allele frequency: 1.682113526171708e-3
allele num: 121276
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370814
  ensembl transcript: ENST00000381407
  gene symbol: EMR1
  hgvsc: ENST00000381407.5:c.1583C>T
  hgvsp: ENSP00000370814.4:p.Ala528Val
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000405974
  ensembl transcript: ENST00000450315
  gene symbol: EMR1
  hgvsc: ENST00000450315.3:c.1475C>T
  hgvsp: ENSP00000405974.2:p.Ala492Val
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000311545
  ensembl transcript: ENST00000312053
  gene symbol: EMR1
  hgvsc: ENST00000312053.4:c.2006C>T
  hgvsp: ENSP00000311545.3:p.Ala669Val
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000370811
  ensembl transcript: ENST00000381404
  gene symbol: EMR1
  hgvsc: ENST00000381404.4:c.1850C>T
  hgvsp: ENSP00000370811.4:p.Ala617Val
  variant of: http://identifiers.org/hgnc/3336
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174837
  ensembl protein: ENSP00000250572
  ensembl transcript: ENST00000250572
  gene symbol: EMR1
  hgvsc: ENST00000250572.8:c.1811C>T
  hgvsp: ENSP00000250572.7:p.Ala604Val
  variant of: http://identifiers.org/hgnc/3336
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 5.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 4.75e1
  variant carriers: 15
hgvs: p.Ala669Val
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 288
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1474
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1253
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4880
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1119
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9316
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2195
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2293
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34896
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1092
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2686
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10418
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2542
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.33e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.24e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.38e0

DP
type: SiteQuality
SIO_000300: 6.82487e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

VQSLOD
type: SiteQuality
SIO_000300: -1.696e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e0

GenotypeQuality
all individuals: 340
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2289
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1194
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 5.714285714285715e-4
allele num: 3500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2874
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 21982
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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ClippingRankSum
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SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.15e-2

BaseQRankSum
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SIO_000300: -1.849e0

FS
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SIO_000300: 0.0e0

MQ
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 8.52e-1

VQSLOD
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DP
type: SiteQuality
SIO_000300: 6.99429e5

MQRankSum
type: SiteQuality
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QD
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SIO_000300: 1.48e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 11062
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 3418
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3910
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 25218
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1500
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 6.506180871828237e-4
allele num: 3074
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MQRankSum
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SIO_000300: 3.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.2871e1

BaseQRankSum
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SIO_000300: -3.65e-1

VQSLOD
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DP
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.134e0

InbreedingCoeff
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SIO_000300: 9.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 522
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 9
allele frequency: 2.467105263157895e-4
allele num: 36480
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 5516
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.514e0

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

DP
type: SiteQuality
SIO_000300: 8.95937e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.75e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 5808
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.622882022766616e-5
allele num: 38126
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 534
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5400
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2742
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.55e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.806e0

QD
type: SiteQuality
SIO_000300: 3.68e0

DP
type: SiteQuality
SIO_000300: 9.21564e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.134e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.9e-3

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5766
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.431788337143135e-5
allele num: 41122
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3096
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.81e0

FS
type: SiteQuality
SIO_000300: 4.901e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e0

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.817e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.2e-3

VQSLOD
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -4.37e-1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 1
allele frequency: 1.492537313432836e-4
allele num: 6700
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 42272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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MQRankSum
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SIO_000300: -7.02e-1

VQSLOD
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BaseQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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ReadPosRankSum
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MQ
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 46624
num of homozygotes: 0

African
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East Asian
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South Asian
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allele frequency: 7.305669199298655e-5
allele num: 13688
num of homozygotes: 0

Latino
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num of homozygotes: 0

European (Finnish)
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Other
type: Population
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InbreedingCoeff
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MQ
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DP
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
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allele frequency: 4.289636238846946e-5
allele num: 46624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7672
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
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allele num: 634
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VQSLOD
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SIO_000300: 8.139999999999999e-1

InbreedingCoeff
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SIO_000300: 5.3e-3

MQ
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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SIO_000300: -9.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e0

QD
type: SiteQuality
SIO_000300: 1.54e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

DP
type: SiteQuality
SIO_000300: 1.049188e6

GenotypeQuality
all individuals: 3600
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1132
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6780
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.550387596899225e-4
allele num: 6450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4012
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8256
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13856
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49178
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.761e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.911e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.91e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.93e-1

QD
type: SiteQuality
SIO_000300: 7.92e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

DP
type: SiteQuality
SIO_000300: 1.079219e6

GenotypeQuality
all individuals: 1268
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.860258637328701e-5
allele num: 51810
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7152
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14030
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8978
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4470
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.167e0

VQSLOD
type: SiteQuality
SIO_000300: -2.994e-1

QD
type: SiteQuality
SIO_000300: 3.009e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

DP
type: SiteQuality
SIO_000300: 1.123743e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

GenotypeQuality
all individuals: 326
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1514
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4060
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variant carriers: 0

GenotypeQuality
all individuals: 1673
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6984
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.163097555699762e-4
allele num: 9246
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52888
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.062e0

MQRankSum
type: SiteQuality
SIO_000300: -2.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.98e-1

DP
type: SiteQuality
SIO_000300: 1.143115e6

QD
type: SiteQuality
SIO_000300: 2.242e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.259e0

GenotypeQuality
all individuals: 1090
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 296
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variant carriers: 0

GenotypeQuality
all individuals: 129
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GenotypeQuality
all individuals: 736
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 621
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GenotypeQuality
all individuals: 230
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5036
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14456
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.029220779220779e-4
allele num: 9856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55984
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.376e0

DP
type: SiteQuality
SIO_000300: 1.199336e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

FS
type: SiteQuality
SIO_000300: 7.549e0

QD
type: SiteQuality
SIO_000300: 2.319e1

VQSLOD
type: SiteQuality
SIO_000300: -8.011e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 825
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1937
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variant carriers: 0

GenotypeQuality
all individuals: 1333
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.696928559307653e-5
allele num: 58930
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.71e-1

FS
type: SiteQuality
SIO_000300: 3.421e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.67e-1

DP
type: SiteQuality
SIO_000300: 1.251122e6

VQSLOD
type: SiteQuality
SIO_000300: 7.73e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.58e-1

QD
type: SiteQuality
SIO_000300: 1.502e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.61e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5612
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.546099290780142e-4
allele num: 8460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.685147113342995e-5
allele num: 59342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7952
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.658e0

FS
type: SiteQuality
SIO_000300: 7.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

DP
type: SiteQuality
SIO_000300: 1.260255e6

QD
type: SiteQuality
SIO_000300: 9.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.52e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 515
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8030
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.671011296036361e-5
allele num: 59844
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14756
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -7.79e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.821e0

DP
type: SiteQuality
SIO_000300: 1.271238e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

QD
type: SiteQuality
SIO_000300: 1.648e1

GenotypeQuality
all individuals: 1985
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 395
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GenotypeQuality
all individuals: 626
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8082
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.659310390601666e-5
allele num: 60266
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14766
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8738
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5794
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.280012e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.082e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.88e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.149999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.515e-1

FS
type: SiteQuality
SIO_000300: 2.863e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 6.68e0

GenotypeQuality
all individuals: 375
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6350
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34489
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2248
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5529
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2002
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1356
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 909
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1325
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10824
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8082
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.793478260869565e-5
allele num: 14720
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5800
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8744
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60298
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.556e0

MQRankSum
type: SiteQuality
SIO_000300: -2.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

QD
type: SiteQuality
SIO_000300: 1.077e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

FS
type: SiteQuality
SIO_000300: 1.582e0

DP
type: SiteQuality
SIO_000300: 1.27977e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.53e-1

GenotypeQuality
all individuals: 3247
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3558
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2331
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16204
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66426
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.667440061871617e-5
allele num: 10344
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e0

MQ
type: SiteQuality
SIO_000300: 5.872e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.12e0

QD
type: SiteQuality
SIO_000300: 1.684e1

VQSLOD
type: SiteQuality
SIO_000300: -2.11e0

DP
type: SiteQuality
SIO_000300: 1.86753e6

MQRankSum
type: SiteQuality
SIO_000300: 9.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 1.7933e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.052e0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3231
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5138
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 1044
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3552
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.669309611293753e-5
allele num: 10342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.108560756672089e-4
allele num: 66396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16148
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.1e-2

DP
type: SiteQuality
SIO_000300: 1.865057e6

MQRankSum
type: SiteQuality
SIO_000300: 1.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.18e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.241e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.07e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.176e0

GenotypeQuality
all individuals: 1037
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2314
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1227
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
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variant carriers: 0

GenotypeQuality
all individuals: 30432
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 10
allele frequency: 9.691800736576856e-4
allele num: 10318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15786
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511532996765319e-5
allele num: 66158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.987e1

VQSLOD
type: SiteQuality
SIO_000300: 5.26e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.03e0

DP
type: SiteQuality
SIO_000300: 1.832595e6

QD
type: SiteQuality
SIO_000300: 1.375e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.41e-1

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29680
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variant carriers: 0

GenotypeQuality
all individuals: 295
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variant carriers: 0

GenotypeQuality
all individuals: 9018
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variant carriers: 0

GenotypeQuality
all individuals: 2307
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512721991952319e-5
allele num: 66106
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.697164724299878e-5
allele num: 11498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15702
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.121076233183856e-3
allele num: 892
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

MQRankSum
type: SiteQuality
SIO_000300: -6.14e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.823651e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.37e0

QD
type: SiteQuality
SIO_000300: 1.189e1

GenotypeQuality
all individuals: 3157
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8988
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 314
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variant carriers: 0

GenotypeQuality
all individuals: 2584
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.382435537401073e-5
allele num: 15668
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158211721102618e-4
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66092
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.819215e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.02e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

QD
type: SiteQuality
SIO_000300: 1.093e1

MQ
type: SiteQuality
SIO_000300: 5.948e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.421e0

MQRankSum
type: SiteQuality
SIO_000300: 5.93e-1

GenotypeQuality
all individuals: 1033
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3501
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GenotypeQuality
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GenotypeQuality
all individuals: 965
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GenotypeQuality
all individuals: 1223
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513042425709617e-5
allele num: 66092
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15668
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.421e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.02e0

MQRankSum
type: SiteQuality
SIO_000300: 5.93e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

QD
type: SiteQuality
SIO_000300: 1.093e1

DP
type: SiteQuality
SIO_000300: 1.819215e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.44e-1

GenotypeQuality
all individuals: 570
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
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GenotypeQuality
all individuals: 3157
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GenotypeQuality
all individuals: 5116
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.703220191470844e-5
allele num: 11490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66092
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.02e0

MQRankSum
type: SiteQuality
SIO_000300: 5.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.44e-1

DP
type: SiteQuality
SIO_000300: 1.819215e6

MQ
type: SiteQuality
SIO_000300: 5.948e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

QD
type: SiteQuality
SIO_000300: 1.093e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.421e0

GenotypeQuality
all individuals: 3139
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
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GenotypeQuality
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GenotypeQuality
all individuals: 711
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GenotypeQuality
all individuals: 5113
bin: 9.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.611420612813371e-4
allele num: 11488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66008
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6432
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

FS
type: SiteQuality
SIO_000300: 2.371e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

MQ
type: SiteQuality
SIO_000300: 5.937e1

DP
type: SiteQuality
SIO_000300: 1.807412e6

QD
type: SiteQuality
SIO_000300: 1.316e1

GenotypeQuality
all individuals: 1027
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
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variant carriers: 0

GenotypeQuality
all individuals: 3468
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variant carriers: 0

GenotypeQuality
all individuals: 1148
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GenotypeQuality
all individuals: 5112
bin: 9.75e1
variant carriers: 7

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.555209953343701e-4
allele num: 6430
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10290
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.089807296085323e-5
allele num: 66008
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.371e0

FS
type: SiteQuality
SIO_000300: 6.594e0

MQRankSum
type: SiteQuality
SIO_000300: -5.56e-1

DP
type: SiteQuality
SIO_000300: 1.805988e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.551e1

GenotypeQuality
all individuals: 297
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
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GenotypeQuality
all individuals: 8677
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GenotypeQuality
all individuals: 832
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variant carriers: 0

GenotypeQuality
all individuals: 28001
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65924
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.476683937823834e-5
allele num: 15440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6416
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

FS
type: SiteQuality
SIO_000300: 5.096e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

QD
type: SiteQuality
SIO_000300: 1.562e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.261e0

DP
type: SiteQuality
SIO_000300: 1.794542e6

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-2

MQ
type: SiteQuality
SIO_000300: 5.756e1

GenotypeQuality
all individuals: 76
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2279
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5106
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 28001
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.033796492931254e-5
allele num: 65924
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15440
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

MQ
type: SiteQuality
SIO_000300: 5.756e1

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e-1

FS
type: SiteQuality
SIO_000300: 5.096e0

QD
type: SiteQuality
SIO_000300: 1.562e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.261e0

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-2

DP
type: SiteQuality
SIO_000300: 1.794542e6

GenotypeQuality
all individuals: 1288
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 120
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25601
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15294
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.746588693957115e-5
allele num: 10260
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65822
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.949e1

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

VQSLOD
type: SiteQuality
SIO_000300: 6.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

DP
type: SiteQuality
SIO_000300: 1.767252e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.79e-1

FS
type: SiteQuality
SIO_000300: 2.006e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.99e-1

QD
type: SiteQuality
SIO_000300: 1.389e1

GenotypeQuality
all individuals: 1959
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2238
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519248883352071e-5
allele num: 65822
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6362
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.006e0

QD
type: SiteQuality
SIO_000300: 1.389e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e0

DP
type: SiteQuality
SIO_000300: 1.767252e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.5e-1

GenotypeQuality
all individuals: 1887
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1203
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65776
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.6006600660066e-5
allele num: 15150
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.406e0

DP
type: SiteQuality
SIO_000300: 1.747497e6

QD
type: SiteQuality
SIO_000300: 1.152e1

VQSLOD
type: SiteQuality
SIO_000300: 7.85e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.779e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

FS
type: SiteQuality
SIO_000300: 4.576e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1234
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4113
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2200
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variant carriers: 0

GenotypeQuality
all individuals: 3161
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.75609756097561e-5
allele num: 10250
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15142
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6368
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.66e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.47e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.441e0

DP
type: SiteQuality
SIO_000300: 1.74543e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.773e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

GenotypeQuality
all individuals: 985
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variant carriers: 0

GenotypeQuality
all individuals: 5084
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variant carriers: 17

GenotypeQuality
all individuals: 2692
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variant carriers: 0

GenotypeQuality
all individuals: 619
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GenotypeQuality
all individuals: 7287
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15030
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.623753716984433e-4
allele num: 11434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.761811792268645e-5
allele num: 10244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.978630787495053e-4
allele num: 65702
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.728095e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.03e0

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 9.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.23e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.54e-1

QD
type: SiteQuality
SIO_000300: 1.779e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15030
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522023682688503e-5
allele num: 65702
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6346
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.23e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

DP
type: SiteQuality
SIO_000300: 1.728095e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.24e-1

FS
type: SiteQuality
SIO_000300: 9.8e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

QD
type: SiteQuality
SIO_000300: 1.779e1

MQRankSum
type: SiteQuality
SIO_000300: 1.54e-1

GenotypeQuality
all individuals: 4506
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 653
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variant carriers: 0

GenotypeQuality
all individuals: 2163
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GenotypeQuality
all individuals: 23659
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GenotypeQuality
all individuals: 5082
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.698821007502679e-5
allele num: 14928
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65624
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.862e1

MQRankSum
type: SiteQuality
SIO_000300: -6.8e-2

DP
type: SiteQuality
SIO_000300: 1.714237e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.11e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

VQSLOD
type: SiteQuality
SIO_000300: 3.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.481e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 983
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.773260359655981e-5
allele num: 10232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6340
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.628351147713334e-4
allele num: 11414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14928
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.980982567353407e-4
allele num: 65624
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.11e-2

MQ
type: SiteQuality
SIO_000300: 5.975e1

MQRankSum
type: SiteQuality
SIO_000300: -6.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.481e0

VQSLOD
type: SiteQuality
SIO_000300: 3.82e0

DP
type: SiteQuality
SIO_000300: 1.714237e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.87e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.862e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6712
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2154
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GenotypeQuality
all individuals: 935
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6324
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.164144353899884e-4
allele num: 8590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65542
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

DP
type: SiteQuality
SIO_000300: 1.685686e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.81e-1

FS
type: SiteQuality
SIO_000300: 3.103e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.393e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.52e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2565
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6624
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GenotypeQuality
all individuals: 5070
bin: 9.75e1
variant carriers: 7

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.168567807351077e-4
allele num: 6312
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11406
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.635686142756788e-5
allele num: 65482
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.3678e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.281e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.04e-1

DP
type: SiteQuality
SIO_000300: 1.683517e6

QD
type: SiteQuality
SIO_000300: 1.618e1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1272
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variant carriers: 0

GenotypeQuality
all individuals: 2985
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2550
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20965
bin: 6.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 36
allele frequency: 5.498365763509179e-4
allele num: 65474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10218
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11380
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14712
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.309468822170901e-3
allele num: 866
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 43
allele frequency: 6.814580031695721e-3
allele num: 6310
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.71e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

QD
type: SiteQuality
SIO_000300: 1.423e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

DP
type: SiteQuality
SIO_000300: 1.676138e6

GenotypeQuality
all individuals: 2600
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1177
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2124
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 981
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18885
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.769475357710652e-4
allele num: 6290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 51
allele frequency: 7.798403620905838e-4
allele num: 65398
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.72e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.662622e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.203e0

MQRankSum
type: SiteQuality
SIO_000300: 2.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e-1

QD
type: SiteQuality
SIO_000300: 1.269e1

GenotypeQuality
all individuals: 2111
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 976
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4434
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1501
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2425
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6266
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.844861135680169e-5
allele num: 11306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65156
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14330
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.635398e6

VQSLOD
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 2.079e0

MQRankSum
type: SiteQuality
SIO_000300: -1.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.598e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.499e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.75e-1

GenotypeQuality
all individuals: 2921
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5060
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 4306
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2705
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6244
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14190
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11284
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.613255420575119e-5
allele num: 65030
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10184
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.29e-1

FS
type: SiteQuality
SIO_000300: 4.367e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

QD
type: SiteQuality
SIO_000300: 1.131e1

VQSLOD
type: SiteQuality
SIO_000300: 8.090000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.628153e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.5e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 5059
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 977
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2099
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2808
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11404
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11262
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.129616426636246e-5
allele num: 14026
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6220
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.623175e6

QD
type: SiteQuality
SIO_000300: 4.14e0

MQRankSum
type: SiteQuality
SIO_000300: -1.81e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.404e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.717e0

GenotypeQuality
all individuals: 4064
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3027
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4776
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10358
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1114
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.183431952662722e-4
allele num: 8450
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11100
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.255453375600264e-4
allele num: 63722
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 1.023541453428864e-3
allele num: 5862
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.016535591853196e-4
allele num: 9918
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.118e0

FS
type: SiteQuality
SIO_000300: 1.9802e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e0

VQSLOD
type: SiteQuality
SIO_000300: -3.983e0

DP
type: SiteQuality
SIO_000300: 1.621478e6

MQ
type: SiteQuality
SIO_000300: 5.898e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.09e-1

QD
type: SiteQuality
SIO_000300: 1.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.376e0

GenotypeQuality
all individuals: 2915
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1715
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1554
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2444
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3909
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.298697014679201e-5
allele num: 60630
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.046462955211386e-4
allele num: 9556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5778
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.533e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.57e-2

DP
type: SiteQuality
SIO_000300: 1.41484e6

QD
type: SiteQuality
SIO_000300: 1.512e1

GenotypeQuality
all individuals: 3435
bin: 2.25e1
variant carriers: 11

GenotypeQuality
all individuals: 4908
bin: 5.25e1
variant carriers: 27

GenotypeQuality
all individuals: 953
bin: 9.25e1
variant carriers: 48

GenotypeQuality
all individuals: 9651
bin: 9.75e1
variant carriers: 3806

GenotypeQuality
all individuals: 5218
bin: 4.75e1
variant carriers: 32

African
type: Population
allele count: 1222
allele frequency: 1.278777731268313e-1
allele num: 9556
num of homozygotes: 89

East Asian
type: Population
allele count: 204
allele frequency: 2.715654952076677e-2
allele num: 7512
num of homozygotes: 8

European (Non-Finnish)
type: Population
allele count: 1230
allele frequency: 2.028698664027709e-2
allele num: 60630
num of homozygotes: 7

Latino
type: Population
allele count: 914
allele frequency: 9.473466003316749e-2
allele num: 9648
num of homozygotes: 38

South Asian
type: Population
allele count: 362
allele frequency: 2.334881320949432e-2
allele num: 15504
num of homozygotes: 8

European (Finnish)
type: Population
allele count: 141
allele frequency: 2.440290758047767e-2
allele num: 5778
num of homozygotes: 0

Other
type: Population
allele count: 39
allele frequency: 4.791154791154791e-2
allele num: 814
num of homozygotes: 3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.57e-2

QD
type: SiteQuality
SIO_000300: 1.512e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.533e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

DP
type: SiteQuality
SIO_000300: 1.41484e6

GenotypeQuality
all individuals: 5352
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2353
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9327
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 893
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5792
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.016880211511084e-4
allele num: 9834
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7576
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.8e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.047e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.48e0

MQRankSum
type: SiteQuality
SIO_000300: -1.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.46e0

QD
type: SiteQuality
SIO_000300: 1.389e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.424585e6

GenotypeQuality
all individuals: 6437
bin: 9.75e1
variant carriers: 19

GenotypeQuality
all individuals: 4704
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2444
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3003
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.265839320705422e-5
allele num: 61240
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5828
num of homozygotes: 0

African
type: Population
allele count: 16
allele frequency: 1.653234139284976e-3
allele num: 9678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.007049345417925e-4
allele num: 9930
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

FS
type: SiteQuality
SIO_000300: 1.706e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.37e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.41e0

QD
type: SiteQuality
SIO_000300: 2.06e1

DP
type: SiteQuality
SIO_000300: 1.438796e6

GenotypeQuality
all individuals: 100
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6434
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1980
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2567
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5001
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9948
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9696
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5848
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.630842493232004e-5
allele num: 61318
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15630
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.421e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

DP
type: SiteQuality
SIO_000300: 1.479509e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.3e0

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.13e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.69e-1

GenotypeQuality
all individuals: 697
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1523
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4708
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20813
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5860
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10018
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61562
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.409638554216868e-3
allele num: 830
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15680
num of homozygotes: 0

East Asian
type: Population
allele count: 13
allele frequency: 1.699346405228758e-3
allele num: 7650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9730
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.66e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.86e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.466e1

MQRankSum
type: SiteQuality
SIO_000300: -1.28e-1

DP
type: SiteQuality
SIO_000300: 1.514985e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.546e0

GenotypeQuality
all individuals: 21287
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3730
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6472
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2827
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1968
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.964129135113592e-5
allele num: 10036
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9754
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5860
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15688
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.242857606122515e-5
allele num: 61674
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.311e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

DP
type: SiteQuality
SIO_000300: 1.522038e6

GenotypeQuality
all individuals: 466
bin: 5.25e1
variant carriers: 198

GenotypeQuality
all individuals: 724
bin: 8.75e1
variant carriers: 182

GenotypeQuality
all individuals: 948
bin: 9.25e1
variant carriers: 297

GenotypeQuality
all individuals: 2170
bin: 7.75e1
variant carriers: 320

GenotypeQuality
all individuals: 637
bin: 2.75e1
variant carriers: 48

East Asian
type: Population
allele count: 252
allele frequency: 3.165033911077619e-2
allele num: 7962
num of homozygotes: 10

Other
type: Population
allele count: 228
allele frequency: 2.638888888888889e-1
allele num: 864
num of homozygotes: 36

European (Non-Finnish)
type: Population
allele count: 17421
allele frequency: 2.698002168189562e-1
allele num: 64570
num of homozygotes: 2247

European (Finnish)
type: Population
allele count: 1342
allele frequency: 2.179278986683988e-1
allele num: 6158
num of homozygotes: 138

Latino
type: Population
allele count: 3697
allele frequency: 3.402355972759065e-1
allele num: 10866
num of homozygotes: 609

South Asian
type: Population
allele count: 3063
allele frequency: 1.901303538175046e-1
allele num: 16110
num of homozygotes: 324

African
type: Population
allele count: 6112
allele frequency: 5.942057165078748e-1
allele num: 10286
num of homozygotes: 1803

MQRankSum
type: SiteQuality
SIO_000300: 1.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.5e0

QD
type: SiteQuality
SIO_000300: 2.126e1

DP
type: SiteQuality
SIO_000300: 1.982069e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.09e-2

GenotypeQuality
all individuals: 1547
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1651
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27386
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2170
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6158
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16110
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10866
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.721952167995334e-5
allele num: 10286
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7962
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.46e-1

QD
type: SiteQuality
SIO_000300: 2.126e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.09e-2

DP
type: SiteQuality
SIO_000300: 1.982069e6

VQSLOD
type: SiteQuality
SIO_000300: 4.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

GenotypeQuality
all individuals: 561
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1710
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5714
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11078
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16154
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.671179883945841e-5
allele num: 10340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65108
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8028
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6210
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.484e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.25e0

QD
type: SiteQuality
SIO_000300: 1.418e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.58e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.58e-1

FS
type: SiteQuality
SIO_000300: 1.135e0

DP
type: SiteQuality
SIO_000300: 2.001562e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.36e0

MQ
type: SiteQuality
SIO_000300: 5.732e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

GenotypeQuality
all individuals: 3907
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3336
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2477
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1710
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2813
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6216
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11104
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8048
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.189650903689032e-5
allele num: 16156
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65162
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.53e-1

FS
type: SiteQuality
SIO_000300: 1.487e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

QD
type: SiteQuality
SIO_000300: 1.361e1

DP
type: SiteQuality
SIO_000300: 2.006497e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.081e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

GenotypeQuality
all individuals: 15693
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 733
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3336
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2477
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65162
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11104
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 7.455268389662028e-4
allele num: 8048
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6216
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.237930180737806e-4
allele num: 16156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.361e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.53e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.81e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

DP
type: SiteQuality
SIO_000300: 2.006497e6

FS
type: SiteQuality
SIO_000300: 1.487e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.081e0

GenotypeQuality
all individuals: 3204
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 5656
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 780
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 17165
bin: 9.75e1
variant carriers: 2511

European (Non-Finnish)
type: Population
allele count: 1146
allele frequency: 1.754117430967979e-2
allele num: 65332
num of homozygotes: 15

African
type: Population
allele count: 816
allele frequency: 7.896264757112445e-2
allele num: 10334
num of homozygotes: 29

East Asian
type: Population
allele count: 1
allele frequency: 1.237930180737806e-4
allele num: 8078
num of homozygotes: 0

Other
type: Population
allele count: 15
allele frequency: 1.704545454545454e-2
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 37
allele frequency: 5.937098844672657e-3
allele num: 6232
num of homozygotes: 0

Latino
type: Population
allele count: 170
allele frequency: 1.528227256382596e-2
allele num: 11124
num of homozygotes: 3

South Asian
type: Population
allele count: 400
allele frequency: 2.469440671687863e-2
allele num: 16198
num of homozygotes: 11

BaseQRankSum
type: SiteQuality
SIO_000300: 3.29e0

DP
type: SiteQuality
SIO_000300: 2.031562e6

MQRankSum
type: SiteQuality
SIO_000300: -2.32e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.717e1

VQSLOD
type: SiteQuality
SIO_000300: 3.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.54e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.07e-1

MQ
type: SiteQuality
SIO_000300: 5.883e1

GenotypeQuality
all individuals: 17165
bin: 9.75e1
variant carriers: 16

GenotypeQuality
all individuals: 1650
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 700
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 7.5e0
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8078
num of homozygotes: 0

African
type: Population
allele count: 15
allele frequency: 1.45151925682214e-3
allele num: 10334
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16198
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.989572096368213e-5
allele num: 11124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6232
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.05e-1

MQ
type: SiteQuality
SIO_000300: 5.883e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.54e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.29e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.07e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.32e-1

QD
type: SiteQuality
SIO_000300: 1.717e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.8e-2

DP
type: SiteQuality
SIO_000300: 2.031562e6

GenotypeQuality
all individuals: 4007
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16138
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 28
bin: 7.5e0
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6248
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.941344778254649e-5
allele num: 11184
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8142
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16222
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

QD
type: SiteQuality
SIO_000300: 1.441e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.21e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

DP
type: SiteQuality
SIO_000300: 2.037247e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4069
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16162
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 331
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2922
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6298
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11276
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8264
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.652509652509652e-5
allele num: 10360
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16282
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65814
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.697000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.18e-1

MQ
type: SiteQuality
SIO_000300: 5.873e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.2e-2

DP
type: SiteQuality
SIO_000300: 2.050962e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 1.384e0

QD
type: SiteQuality
SIO_000300: 1.614e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

GenotypeQuality
all individuals: 16180
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3579
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2604
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4162
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.796622097114708e-5
allele num: 11368
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66218
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.05e-1

MQ
type: SiteQuality
SIO_000300: 5.897e1

MQRankSum
type: SiteQuality
SIO_000300: 5.37e-1

QD
type: SiteQuality
SIO_000300: 3.328e1

VQSLOD
type: SiteQuality
SIO_000300: -1.972e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.1e-2

DP
type: SiteQuality
SIO_000300: 2.069518e6

GenotypeQuality
all individuals: 4184
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2620
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21073
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1849
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16191
bin: 9.75e1
variant carriers: 7

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.780346820809249e-4
allele num: 10380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6392
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.121076233183856e-3
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.97e-1

MQ
type: SiteQuality
SIO_000300: 5.895e1

QD
type: SiteQuality
SIO_000300: 1.69e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e0

DP
type: SiteQuality
SIO_000300: 2.074813e6

FS
type: SiteQuality
SIO_000300: 1.205e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 141
bin: 4.75e1
variant carriers: 30

GenotypeQuality
all individuals: 151
bin: 5.75e1
variant carriers: 40

GenotypeQuality
all individuals: 761
bin: 8.75e1
variant carriers: 89

GenotypeQuality
all individuals: 931
bin: 9.25e1
variant carriers: 174

GenotypeQuality
all individuals: 88
bin: 4.25e1
variant carriers: 18

GenotypeQuality
all individuals: 1666
bin: 8.25e1
variant carriers: 147

GenotypeQuality
all individuals: 1882
bin: 7.25e1
variant carriers: 63

GenotypeQuality
all individuals: 29928
bin: 9.75e1
variant carriers: 26928

European (Non-Finnish)
type: Population
allele count: 18248
allele frequency: 2.747282526873626e-1
allele num: 66422
num of homozygotes: 2476

African
type: Population
allele count: 6245
allele frequency: 6.016377649325626e-1
allele num: 10380
num of homozygotes: 1880

Other
type: Population
allele count: 235
allele frequency: 2.640449438202247e-1
allele num: 890
num of homozygotes: 37

Latino
type: Population
allele count: 3829
allele frequency: 3.351129004025906e-1
allele num: 11426
num of homozygotes: 655

South Asian
type: Population
allele count: 3184
allele frequency: 1.936033077952086e-1
allele num: 16446
num of homozygotes: 334

European (Finnish)
type: Population
allele count: 1373
allele frequency: 2.127362875735978e-1
allele num: 6454
num of homozygotes: 142

East Asian
type: Population
allele count: 255
allele frequency: 2.983852094547157e-2
allele num: 8546
num of homozygotes: 10

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.190000000000001e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

DP
type: SiteQuality
SIO_000300: 2.555546e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.13e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e-1

QD
type: SiteQuality
SIO_000300: 1.981e1

GenotypeQuality
all individuals: 82
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3205
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3614
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4383
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15211
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 172
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.739432944859976e-4
allele num: 11498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66584
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.529e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.3e-1

MQ
type: SiteQuality
SIO_000300: 5.923e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.71e-1

DP
type: SiteQuality
SIO_000300: 2.098609e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.76e-1

FS
type: SiteQuality
SIO_000300: 2.085e0

QD
type: SiteQuality
SIO_000300: 2.265e1

MQRankSum
type: SiteQuality
SIO_000300: 2.54e-1

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15203
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 100
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 2724
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.068697657482704e-5
allele num: 16478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e-1

FS
type: SiteQuality
SIO_000300: 1.171e0

DP
type: SiteQuality
SIO_000300: 2.102054e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.956e1

QD
type: SiteQuality
SIO_000300: 1.333e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.394e0

GenotypeQuality
all individuals: 100
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4380
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3609
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1884
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15203
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500555205426008e-5
allele num: 66642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.333e1

MQRankSum
type: SiteQuality
SIO_000300: 4.84e-1

FS
type: SiteQuality
SIO_000300: 1.171e0

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.956e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.394e0

DP
type: SiteQuality
SIO_000300: 2.102054e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.2e-2

GenotypeQuality
all individuals: 3223
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1884
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15203
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 73
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500555205426008e-5
allele num: 66642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.2e-2

DP
type: SiteQuality
SIO_000300: 2.102054e6

FS
type: SiteQuality
SIO_000300: 1.171e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.394e0

QD
type: SiteQuality
SIO_000300: 1.333e1

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15203
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 71
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160362032954282e-4
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66664
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.429e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.102998e6

QD
type: SiteQuality
SIO_000300: 2.451e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.52e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.55e-1

GenotypeQuality
all individuals: 3251
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
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variant carriers: 0

GenotypeQuality
all individuals: 1887
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GenotypeQuality
all individuals: 4404
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6815
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22452
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499250374812594e-5
allele num: 66700
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 2.105719e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.536e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -6.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-1

FS
type: SiteQuality
SIO_000300: 8.03e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.249e0

QD
type: SiteQuality
SIO_000300: 2.336e1

GenotypeQuality
all individuals: 3616
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 25
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GenotypeQuality
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GenotypeQuality
all individuals: 22497
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GenotypeQuality
all individuals: 1889
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

FS
type: SiteQuality
SIO_000300: 1.14e0

MQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.4e-2

QD
type: SiteQuality
SIO_000300: 1.303e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 2.106356e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.44e0

GenotypeQuality
all individuals: 3616
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 2724
bin: 9.25e1
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GenotypeQuality
all individuals: 6814
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GenotypeQuality
all individuals: 15208
bin: 9.75e1
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GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

FS
type: SiteQuality
SIO_000300: 1.14e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.44e0

QD
type: SiteQuality
SIO_000300: 1.303e1

DP
type: SiteQuality
SIO_000300: 2.106356e6