http://identifiers.org/exac.variant/14-32619203-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32619203
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32619203
    reference: chr 14
allele count: 1
allele frequency: 8.481908090043937e-6
allele num: 117898
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4039C>A
  hgvsp: ENSP00000371897.1:p.Pro1347Thr
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.244C>A
  hgvsp: ENSP00000379827.2:p.Pro82Thr
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4036C>A
  hgvsp: ENSP00000452222.1:p.Pro1346Thr
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4039C>A
  hgvsp: ENSP00000441692.2:p.Pro1347Thr
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*78C>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4036C>A
  hgvsp: ENSP00000393307.1:p.Pro1346Thr
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.256C>A
  hgvsp: ENSP00000407395.1:p.Pro86Thr
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.256C>A
  hgvsp: ENSP00000451061.1:p.Pro86Thr
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44529
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9241
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1008
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro1347Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

14-32619209-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32619209
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32619209
    reference: chr 14
allele count: 2
allele frequency: 1.68580050236855e-5
allele num: 118638
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4042T>G
  hgvsp: ENSP00000393307.1:p.Ser1348Ala
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.250T>G
  hgvsp: ENSP00000379827.2:p.Ser84Ala
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4045T>G
  hgvsp: ENSP00000371897.1:p.Ser1349Ala
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.262T>G
  hgvsp: ENSP00000407395.1:p.Ser88Ala
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4045T>G
  hgvsp: ENSP00000441692.2:p.Ser1349Ala
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.262T>G
  hgvsp: ENSP00000451061.1:p.Ser88Ala
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4042T>G
  hgvsp: ENSP00000452222.1:p.Ser1348Ala
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*84T>G
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9436
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1690
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser1349Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

14-32619212-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32619212
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32619212
    reference: chr 14
allele count: 1
allele frequency: 8.405904307185366e-6
allele num: 118964
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*87C>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4045C>T
  hgvsp: ENSP00000393307.1:p.Leu1349Phe
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4048C>T
  hgvsp: ENSP00000371897.1:p.Leu1350Phe
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.253C>T
  hgvsp: ENSP00000379827.2:p.Leu85Phe
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4045C>T
  hgvsp: ENSP00000452222.1:p.Leu1349Phe
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.265C>T
  hgvsp: ENSP00000407395.1:p.Leu89Phe
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.265C>T
  hgvsp: ENSP00000451061.1:p.Leu89Phe
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4048C>T
  hgvsp: ENSP00000441692.2:p.Leu1350Phe
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44804
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9540
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu1350Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

14-32619216-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32619216
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32619216
    reference: chr 14
allele count: 2
allele frequency: 1.677233236053806e-5
allele num: 119244
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.269A>T
  hgvsp: ENSP00000451061.1:p.His90Leu
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4052A>T
  hgvsp: ENSP00000371897.1:p.His1351Leu
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.257A>T
  hgvsp: ENSP00000379827.2:p.His86Leu
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4049A>T
  hgvsp: ENSP00000393307.1:p.His1350Leu
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.269A>T
  hgvsp: ENSP00000407395.1:p.His90Leu
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4052A>T
  hgvsp: ENSP00000441692.2:p.His1351Leu
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4049A>T
  hgvsp: ENSP00000452222.1:p.His1350Leu
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*91A>T
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9659
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5220
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 9.75e1
  variant carriers: 2
hgvs: p.His1351Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

14-32619226-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32619226
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32619226
    reference: chr 14
allele count: 1
allele frequency: 8.372825158665037e-6
allele num: 119434
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.279A>G
  hgvsp: ENST00000554090.1:c.279A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4062A>G
  hgvsp: ENST00000539826.2:c.4062A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*101A>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.279A>G
  hgvsp: ENST00000433497.1:c.279A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4059A>G
  hgvsp: ENST00000432921.1:c.4059A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.267A>G
  hgvsp: ENST00000396582.2:c.267A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4062A>G
  hgvsp: ENST00000345122.3:c.4062A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4059A>G
  hgvsp: ENST00000556611.1:c.4059A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1717
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu1354Leu
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

14-32619227-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32619227
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32619227
    reference: chr 14
allele count: 31
allele frequency: 2.596053997923157e-4
allele num: 119412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.280T>C
  hgvsp: ENST00000554090.1:c.280T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4060T>C
  hgvsp: ENST00000432921.1:c.4060T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4060T>C
  hgvsp: ENST00000556611.1:c.4060T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4063T>C
  hgvsp: ENST00000345122.3:c.4063T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4063T>C
  hgvsp: ENST00000539826.2:c.4063T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.268T>C
  hgvsp: ENST00000396582.2:c.268T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.280T>C
  hgvsp: ENST00000433497.1:c.280T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*102T>C
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44324
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9786
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu1355Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

14-32619229-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32619229
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32619229
    reference: chr 14
allele count: 1
allele frequency: 8.377875705836028e-6
allele num: 119362
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4065G>A
  hgvsp: ENST00000345122.3:c.4065G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*104G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.282G>A
  hgvsp: ENST00000433497.1:c.282G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.270G>A
  hgvsp: ENST00000396582.2:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.282G>A
  hgvsp: ENST00000554090.1:c.282G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4065G>A
  hgvsp: ENST00000539826.2:c.4065G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4062G>A
  hgvsp: ENST00000432921.1:c.4062G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4062G>A
  hgvsp: ENST00000556611.1:c.4062G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44173
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9822
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1395
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1513
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu1355Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum

14-32619246-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32619246
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32619246
    reference: chr 14
allele count: 1
allele frequency: 8.417933565668301e-6
allele num: 118794
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4072+7A>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*114+7A>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.292+7A>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4075+7A>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4075+7A>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.292+7A>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4072+7A>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.280+7A>G
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9721
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2360
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1494
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1703
  bin: 7.75e1
  variant carriers: 0
hgvs: c.4075+7A>G
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

14-32619250-ACCT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32619250
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32619247
    reference: chr 14
allele count: 1
allele frequency: 8.430139434506248e-6
allele num: 118622
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.280+15_280+17delCCT
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4075+15_4075+17delCCT
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4072+15_4072+17delCCT
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4072+15_4072+17delCCT
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4075+15_4075+17delCCT
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.292+15_292+17delCCT
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*114+15_*114+17delCCT
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.292+15_292+17delCCT
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2622
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: ACCT
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

14-32619269-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32619269
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32619269
    reference: chr 14
allele count: 2
allele frequency: 1.69618020218468e-5
allele num: 117912
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*114+30G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.280+30G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4072+30G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4075+30G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4072+30G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4075+30G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.292+30G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.292+30G>A
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9495
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3865
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1031
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

14-32619269-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32619269
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32619269
    reference: chr 14
allele count: 1
allele frequency: 8.480901010923401e-6
allele num: 117912
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4072+30G>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4075+30G>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4075+30G>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4072+30G>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*114+30G>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.292+30G>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.280+30G>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.292+30G>T
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9495
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3865
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1681
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1678
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

14-32619279-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32619279
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32619279
    reference: chr 14
allele count: 1
allele frequency: 8.523695874531197e-6
allele num: 117320
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4075+40G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4075+40G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4072+40G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.292+40G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*114+40G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4072+40G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.292+40G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.280+40G>A
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3860
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9326
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1309
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 967
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-32619287-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32619287
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32619287
    reference: chr 14
allele count: 1
allele frequency: 8.563256777817739e-6
allele num: 116778
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*114+48T>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4075+48T>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4075+48T>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.292+48T>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.280+48T>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4072+48T>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4072+48T>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.292+48T>G
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9307
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3726
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35628
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1499
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4762
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2833
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

14-32619288-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32619288
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32619288
    reference: chr 14
allele count: 1
allele frequency: 8.569274011105779e-6
allele num: 116696
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*114+49G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4075+49G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.292+49G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4072+49G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4075+49G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.292+49G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.280+49G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4072+49G>A
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3731
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35513
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9377
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1488
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1693
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1318
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2369
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32482
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

14-32619290-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32619290
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32619290
    reference: chr 14
allele count: 1
allele frequency: 8.583248931385508e-6
allele num: 116506
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.292+51A>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.280+51A>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4075+51A>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.292+51A>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*114+51A>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4072+51A>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4072+51A>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4075+51A>T
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34824
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9941
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3713
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3089
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2662
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1519
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1709
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

14-32621582-T-TATA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32621582
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32621585
    reference: chr 14
allele count: 2
allele frequency: 1.700420003740924e-5
allele num: 117618
alternate allele: TATA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*115-46_*115-45insTAA
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4076-46_4076-45insTAA
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4073-46_4073-45insTAA
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.293-46_293-45insTAA
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4076-46_4076-45insTAA
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.281-46_281-45insTAA
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4073-46_4073-45insTAA
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.293-46_293-45insTAA
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4876
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18190
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7408
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15584
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7087
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1921
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28845
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1378
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1041
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6592
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-32621586-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32621586
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32621586
    reference: chr 14
allele count: 1
allele frequency: 8.475725522104692e-6
allele num: 117984
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.293-43T>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.281-43T>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4076-43T>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*115-43T>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4073-43T>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4076-43T>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4073-43T>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.293-43T>G
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18692
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7092
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4530
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1258
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1897
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1906
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1740
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6754
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

14-32621587-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32621587
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32621587
    reference: chr 14
allele count: 3
allele frequency: 2.543795682330795e-5
allele num: 117934
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4076-42G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.293-42G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.293-42G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4076-42G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.281-42G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4073-42G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*115-42G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4073-42G>A
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4325
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3619
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18700
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1512
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1846
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1713
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3348
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 34428
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2292
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

14-32621588-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32621588
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32621588
    reference: chr 14
allele count: 1
allele frequency: 8.471417437565653e-6
allele num: 118044
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.293-41T>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4076-41T>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.281-41T>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4073-41T>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4076-41T>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*115-41T>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.293-41T>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4073-41T>G
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3094
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18829
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2114
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6798
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1514
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3346
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1719
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

14-32621589-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32621589
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32621589
    reference: chr 14
allele count: 538
allele frequency: 4.557545363671789e-3
allele num: 118046
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4073-40G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4073-40G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4076-40G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*115-40G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.281-40G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.293-40G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.293-40G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4076-40G>A
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3866
  bin: 1.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 3.75e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 18922
  bin: 2.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 1.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 9.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 4.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 20433
  bin: 2.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 7189
  bin: 3.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 5.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.75e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1930
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35730
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1693
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 9
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD

14-32621600-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32621600
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32621600
    reference: chr 14
allele count: 3
allele frequency: 2.521389790052277e-5
allele num: 118982
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.281-29A>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*115-29A>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4073-29A>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.293-29A>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4073-29A>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4076-29A>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4076-29A>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.293-29A>T
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24451
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7388
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19891
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 41176
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-32621600-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32621600
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32621600
    reference: chr 14
allele count: 1
allele frequency: 8.40463263350759e-6
allele num: 118982
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4073-29A>C
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*115-29A>C
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.293-29A>C
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.293-29A>C
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4076-29A>C
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.281-29A>C
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4073-29A>C
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4076-29A>C
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24451
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19891
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7388
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41176
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

14-32621603-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32621603
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32621603
    reference: chr 14
allele count: 1
allele frequency: 8.384619254439656e-6
allele num: 119266
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4076-26G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*115-26G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.293-26G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.281-26G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4073-26G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4076-26G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4073-26G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.293-26G>A
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24854
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7450
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1001
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD

14-32621604-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32621604
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32621604
    reference: chr 14
allele count: 1
allele frequency: 8.376612497905846e-6
allele num: 119380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.293-25A>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*115-25A>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4076-25A>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4076-25A>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.281-25A>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4073-25A>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4073-25A>G
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.293-25A>G
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7436
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20174
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1888
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP

14-32621610-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32621610
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32621610
    reference: chr 14
allele count: 13
allele frequency: 1.085395584944728e-4
allele num: 119772
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.281-19C>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.293-19C>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4076-19C>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*115-19C>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.293-19C>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4076-19C>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4073-19C>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4073-19C>T
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25387
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20416
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7493
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1757
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 773
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42655
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7250
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

14-32621612-CTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32621612
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32621610
    reference: chr 14
allele count: 1
allele frequency: 8.337085021593051e-6
allele num: 119946
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4073-15_4073-14delGT
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4073-15_4073-14delGT
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.293-15_293-14delGT
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.293-15_293-14delGT
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4076-15_4076-14delGT
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4076-15_4076-14delGT
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*115-15_*115-14delGT
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.281-15_281-14delGT
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7519
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 996
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42892
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7282
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1888
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: CTG
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

14-32621635-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32621635
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32621635
    reference: chr 14
allele count: 25
allele frequency: 2.071285356841041e-4
allele num: 120698
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.299C>T
  hgvsp: ENSP00000451061.1:p.Pro100Leu
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4079C>T
  hgvsp: ENSP00000393307.1:p.Pro1360Leu
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.299C>T
  hgvsp: ENSP00000407395.1:p.Pro100Leu
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*121C>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.287C>T
  hgvsp: ENSP00000379827.2:p.Pro96Leu
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4079C>T
  hgvsp: ENSP00000452222.1:p.Pro1360Leu
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4082C>T
  hgvsp: ENSP00000371897.1:p.Pro1361Leu
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4082C>T
  hgvsp: ENSP00000441692.2:p.Pro1361Leu
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7582
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20880
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7397
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3232
  bin: 9.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro1361Leu
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

14-32621636-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32621636
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32621636
    reference: chr 14
allele count: 4
allele frequency: 3.313397723695764e-5
allele num: 120722
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4083G>A
  hgvsp: ENST00000539826.2:c.4083G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*122G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.300G>A
  hgvsp: ENST00000433497.1:c.300G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.300G>A
  hgvsp: ENST00000554090.1:c.300G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4080G>A
  hgvsp: ENST00000556611.1:c.4080G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4083G>A
  hgvsp: ENST00000345122.3:c.4083G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.288G>A
  hgvsp: ENST00000396582.2:c.288G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4080G>A
  hgvsp: ENST00000432921.1:c.4080G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7588
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20924
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro1361Pro
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum

14-32621636-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32621636
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32621636
    reference: chr 14
allele count: 1
allele frequency: 8.28349430923941e-6
allele num: 120722
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4080G>T
  hgvsp: ENST00000432921.1:c.4080G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4083G>T
  hgvsp: ENST00000539826.2:c.4083G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.288G>T
  hgvsp: ENST00000396582.2:c.288G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.300G>T
  hgvsp: ENST00000433497.1:c.300G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.300G>T
  hgvsp: ENST00000554090.1:c.300G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4080G>T
  hgvsp: ENST00000556611.1:c.4080G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*122G>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4083G>T
  hgvsp: ENST00000345122.3:c.4083G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7588
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20924
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3213
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1891
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro1361Pro
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/14-32621649-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32621649
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32621649
    reference: chr 14
allele count: 1
allele frequency: 8.27348843366317e-6
allele num: 120868
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*135C>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4096C>A
  hgvsp: ENSP00000371897.1:p.Arg1366Ser
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4093C>A
  hgvsp: ENSP00000452222.1:p.Arg1365Ser
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.301C>A
  hgvsp: ENSP00000379827.2:p.Arg101Ser
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4093C>A
  hgvsp: ENSP00000393307.1:p.Arg1365Ser
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4096C>A
  hgvsp: ENSP00000441692.2:p.Arg1366Ser
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.313C>A
  hgvsp: ENSP00000407395.1:p.Arg105Ser
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.313C>A
  hgvsp: ENSP00000451061.1:p.Arg105Ser
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1781
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg1366Ser
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

14-32621649-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32621649
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32621649
    reference: chr 14
allele count: 1
allele frequency: 8.27348843366317e-6
allele num: 120868
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4096C>T
  hgvsp: ENSP00000371897.1:p.Arg1366Cys
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4093C>T
  hgvsp: ENSP00000452222.1:p.Arg1365Cys
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.301C>T
  hgvsp: ENSP00000379827.2:p.Arg101Cys
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.313C>T
  hgvsp: ENSP00000451061.1:p.Arg105Cys
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*135C>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4096C>T
  hgvsp: ENSP00000441692.2:p.Arg1366Cys
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4093C>T
  hgvsp: ENSP00000393307.1:p.Arg1365Cys
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.313C>T
  hgvsp: ENSP00000407395.1:p.Arg105Cys
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21015
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3208
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Arg1366Cys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

14-32621650-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32621650
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32621650
    reference: chr 14
allele count: 13
allele frequency: 1.075464517943712e-4
allele num: 120878
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4094G>A
  hgvsp: ENSP00000393307.1:p.Arg1365His
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4097G>A
  hgvsp: ENSP00000371897.1:p.Arg1366His
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.314G>A
  hgvsp: ENSP00000407395.1:p.Arg105His
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4097G>A
  hgvsp: ENSP00000441692.2:p.Arg1366His
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.314G>A
  hgvsp: ENSP00000451061.1:p.Arg105His
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*136G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.302G>A
  hgvsp: ENSP00000379827.2:p.Arg101His
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4094G>A
  hgvsp: ENSP00000452222.1:p.Arg1365His
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21028
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25862
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 43875
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 990
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg1366His
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

14-32621652-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32621652
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32621652
    reference: chr 14
allele count: 1
allele frequency: 8.271161767381846e-6
allele num: 120902
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4096C>T
  hgvsp: ENSP00000452222.1:p.Leu1366Phe
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*138C>T
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.304C>T
  hgvsp: ENSP00000379827.2:p.Leu102Phe
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4099C>T
  hgvsp: ENSP00000371897.1:p.Leu1367Phe
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.316C>T
  hgvsp: ENSP00000451061.1:p.Leu106Phe
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4099C>T
  hgvsp: ENSP00000441692.2:p.Leu1367Phe
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.316C>T
  hgvsp: ENSP00000407395.1:p.Leu106Phe
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4096C>T
  hgvsp: ENSP00000393307.1:p.Leu1366Phe
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21036
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu1367Phe
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/14-32621656-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32621656
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32621656
    reference: chr 14
allele count: 1
allele frequency: 8.270477702792114e-6
allele num: 120912
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4103A>C
  hgvsp: ENSP00000441692.2:p.His1368Pro
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.308A>C
  hgvsp: ENSP00000379827.2:p.His103Pro
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4103A>C
  hgvsp: ENSP00000371897.1:p.His1368Pro
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.320A>C
  hgvsp: ENSP00000451061.1:p.His107Pro
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4100A>C
  hgvsp: ENSP00000393307.1:p.His1367Pro
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*142A>C
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4100A>C
  hgvsp: ENSP00000452222.1:p.His1367Pro
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.320A>C
  hgvsp: ENSP00000407395.1:p.His107Pro
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7581
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25874
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21049
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7434
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43873
  bin: 6.25e1
  variant carriers: 0
hgvs: p.His1368Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD

14-32621658-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32621658
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 32621658
    reference: chr 14
allele count: 7
allele frequency: 5.789621689577027e-5
allele num: 120906
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000371897
  ensembl transcript: ENST00000345122
  gene symbol: ARHGAP5
  hgvsc: ENST00000345122.3:c.4105G>A
  hgvsp: ENSP00000371897.1:p.Ala1369Thr
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000393307
  ensembl transcript: ENST00000432921
  gene symbol: ARHGAP5
  hgvsc: ENST00000432921.1:c.4102G>A
  hgvsp: ENSP00000393307.1:p.Ala1368Thr
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000451061
  ensembl transcript: ENST00000554090
  gene symbol: ARHGAP5
  hgvsc: ENST00000554090.1:c.322G>A
  hgvsp: ENSP00000451061.1:p.Ala108Thr
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452606
  ensembl transcript: ENST00000557643
  gene symbol: ARHGAP5
  hgvsc: ENST00000557643.1:c.*144G>A
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000379827
  ensembl transcript: ENST00000396582
  gene symbol: ARHGAP5
  hgvsc: ENST00000396582.2:c.310G>A
  hgvsp: ENSP00000379827.2:p.Ala104Thr
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000452222
  ensembl transcript: ENST00000556611
  gene symbol: ARHGAP5
  hgvsc: ENST00000556611.1:c.4102G>A
  hgvsp: ENSP00000452222.1:p.Ala1368Thr
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000441692
  ensembl transcript: ENST00000539826
  gene symbol: ARHGAP5
  hgvsc: ENST00000539826.2:c.4105G>A
  hgvsp: ENSP00000441692.2:p.Ala1369Thr
  variant of: http://identifiers.org/hgnc/675
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100852
  ensembl protein: ENSP00000407395
  ensembl transcript: ENST00000433497
  gene symbol: ARHGAP5
  hgvsc: ENST00000433497.1:c.322G>A
  hgvsp: ENSP00000407395.1:p.Ala108Thr
  variant of: http://identifiers.org/hgnc/675
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21052
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7587
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala1369Thr
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ

19-55330024-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55330024
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55330024
    reference: chr 19
allele count: 10
allele frequency: 9.04339018611297e-5
allele num: 110578
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.325C>G
  hgvsp: ENSP00000375608.4:p.Pro109Ala
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.325C>G
  hgvsp: ENSP00000326868.7:p.Pro109Ala
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.70+1000C>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.325C>G
  hgvsp: ENSP00000443350.1:p.Pro109Ala
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.325C>G
  hgvsp: ENSP00000384528.2:p.Pro109Ala
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.325C>G
  hgvsp: ENSP00000442355.1:p.Pro109Ala
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8782
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3034
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6088
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3914
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11871
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1178
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro109Ala
num of homozygotes: 1
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

19-55330024-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55330024
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55330024
    reference: chr 19
allele count: 1
allele frequency: 9.043390186112971e-6
allele num: 110578
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.325C>T
  hgvsp: ENSP00000384528.2:p.Pro109Ser
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.70+1000C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.325C>T
  hgvsp: ENSP00000442355.1:p.Pro109Ser
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.325C>T
  hgvsp: ENSP00000326868.7:p.Pro109Ser
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.325C>T
  hgvsp: ENSP00000375608.4:p.Pro109Ser
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.325C>T
  hgvsp: ENSP00000443350.1:p.Pro109Ser
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6088
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8782
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3034
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1893
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11871
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3914
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29507
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro109Ser
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

19-55330032-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55330032
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55330032
    reference: chr 19
allele count: 1
allele frequency: 9.066511931529702e-6
allele num: 110296
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.333C>T
  hgvsp: ENST00000402254.2:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.333C>T
  hgvsp: ENST00000538269.1:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.333C>T
  hgvsp: ENST00000391728.4:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.333C>T
  hgvsp: ENST00000326542.7:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.70+1008C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.333C>T
  hgvsp: ENST00000541392.1:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3032
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6931
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6054
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2869
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29499
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2239
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1226
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asn111Asn
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum

19-55330035-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55330035
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55330035
    reference: chr 19
allele count: 2
allele frequency: 1.815573993718114e-5
allele num: 110158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.70+1011C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.336C>T
  hgvsp: ENST00000402254.2:c.336C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.336C>T
  hgvsp: ENST00000541392.1:c.336C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.336C>T
  hgvsp: ENST00000538269.1:c.336C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.336C>T
  hgvsp: ENST00000326542.7:c.336C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.336C>T
  hgvsp: ENST00000391728.4:c.336C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3032
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6831
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3439
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8699
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1258
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11590
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2292
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2366
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro112Pro
num of homozygotes: 1
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

19-55330036-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55330036
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55330036
    reference: chr 19
allele count: 24
allele frequency: 2.179440610243371e-4
allele num: 110120
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.337G>A
  hgvsp: ENSP00000326868.7:p.Val113Met
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.337G>A
  hgvsp: ENSP00000442355.1:p.Val113Met
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.337G>A
  hgvsp: ENSP00000443350.1:p.Val113Met
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.337G>A
  hgvsp: ENSP00000375608.4:p.Val113Met
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.337G>A
  hgvsp: ENSP00000384528.2:p.Val113Met
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.70+1012G>A
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8664
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6789
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3438
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6044
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3289
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2059
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1261
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11538
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3856
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1590
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 1
hgvs: p.Val113Met
num of homozygotes: 2
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

19-55330036-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55330036
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55330036
    reference: chr 19
allele count: 4
allele frequency: 3.632401017072285e-5
allele num: 110120
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.337G>C
  hgvsp: ENSP00000326868.7:p.Val113Leu
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.337G>C
  hgvsp: ENSP00000384528.2:p.Val113Leu
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.337G>C
  hgvsp: ENSP00000375608.4:p.Val113Leu
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.337G>C
  hgvsp: ENSP00000443350.1:p.Val113Leu
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.337G>C
  hgvsp: ENSP00000442355.1:p.Val113Leu
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.70+1012G>C
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6044
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6789
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1623
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2293
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1590
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2440
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val113Leu
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum

19-55330047-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55330047
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55330047
    reference: chr 19
allele count: 1
allele frequency: 9.184591928580613e-6
allele num: 108878
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.348G>T
  hgvsp: ENSP00000443350.1:p.Met116Ile
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.348G>T
  hgvsp: ENSP00000326868.7:p.Met116Ile
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.348G>T
  hgvsp: ENSP00000442355.1:p.Met116Ile
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.70+1023G>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.348G>T
  hgvsp: ENSP00000375608.4:p.Met116Ile
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.348G>T
  hgvsp: ENSP00000384528.2:p.Met116Ile
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5882
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3439
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3381
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3030
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3247
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3200
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3675
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2055
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1409
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1063
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Met116Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

19-55330056-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55330056
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55330056
    reference: chr 19
allele count: 1
allele frequency: 9.260288180168167e-6
allele num: 107988
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.355+2T>A
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.355+2T>A
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.355+2T>A
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.355+2T>A
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.70+1032T>A
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.355+2T>A
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3357
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2870
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3248
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3029
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9491
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1588
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3595
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2278
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29489
  bin: 9.75e1
  variant carriers: 1
hgvs: c.355+2T>A
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ

19-55330068-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55330068
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55330068
    reference: chr 19
allele count: 481
allele frequency: 4.52637720437393e-3
allele num: 106266
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.355+14C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.355+14C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.355+14C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.355+14C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.70+1044C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.355+14C>T
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5384
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2660
  bin: 1.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 7.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 5542
  bin: 2.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 6989
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 8.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 3420
  bin: 5.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 2865
  bin: 6.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 9.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2247
  bin: 7.5e0
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 1.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 3013
  bin: 4.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 9.75e1
  variant carriers: 150
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 7.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 3292
  bin: 6.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 3289
  bin: 3.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 8.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 5.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1548
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 3.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 1.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2242
  bin: 7.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 8334
  bin: 6.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3738
  bin: 2.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3404
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2117
  bin: 7.5e0
  variant carriers: 2
num of homozygotes: 55
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

19-55330069-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55330069
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55330069
    reference: chr 19
allele count: 7
allele frequency: 6.597549481621112e-5
allele num: 106100
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.355+15G>A
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.355+15G>A
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.355+15G>A
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.355+15G>A
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.355+15G>A
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.70+1045G>A
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3013
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5507
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3245
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6967
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3735
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1051
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29492
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3408
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2205
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2248
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 1
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-55330069-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55330069
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55330069
    reference: chr 19
allele count: 8
allele frequency: 7.540056550424128e-5
allele num: 106100
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.355+15G>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.355+15G>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.355+15G>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.355+15G>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.355+15G>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.70+1045G>T
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6967
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3013
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8297
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3408
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2205
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2248
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3735
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 1
population: South Asian
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

19-55330089-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55330089
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55330089
    reference: chr 19
allele count: 1
allele frequency: 9.731602405652114e-6
allele num: 102758
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.355+35C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.355+35C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.355+35C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.355+35C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.355+35C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.70+1065C>T
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4959
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5078
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2247
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2999
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3431
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1047
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2017
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2828
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3169
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

19-55330090-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55330090
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55330090
    reference: chr 19
allele count: 421
allele frequency: 4.101794656949668e-3
allele num: 102638
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.355+36A>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.355+36A>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.355+36A>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.70+1066A>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.355+36A>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.355+36A>G
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 6.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 3000
  bin: 4.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 7.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 6141
  bin: 2.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4935
  bin: 2.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 1.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 5060
  bin: 3.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 8.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 3417
  bin: 5.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 7.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 7.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 9.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 6.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 8.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 3430
  bin: 5.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 4.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 2201
  bin: 7.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3161
  bin: 6.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 1.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 2442
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 1.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1508
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 2.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2805
  bin: 7.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2009
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1573
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 3
num of homozygotes: 44
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

19-55330091-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55330091
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55330091
    reference: chr 19
allele count: 3
allele frequency: 2.929859171435826e-5
allele num: 102394
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.355+37C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.70+1067C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.355+37C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.355+37C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.355+37C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.355+37C>T
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3007
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3076
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2874
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29453
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2286
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3079
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2020
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2771
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP

19-55330093-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55330093
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55330093
    reference: chr 19
allele count: 1
allele frequency: 9.767723534353084e-6
allele num: 102378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.70+1069T>A
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.355+39T>A
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.355+39T>A
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.355+39T>A
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.355+39T>A
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.355+39T>A
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4873
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5011
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6048
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2874
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 618
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1582
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29453
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2384
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2202
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1499
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

19-55330095-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55330095
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55330095
    reference: chr 19
allele count: 15
allele frequency: 1.467538058153642e-4
allele num: 102212
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.355+41C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.70+1071C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.355+41C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.355+41C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.355+41C>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.355+41C>T
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5907
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4934
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4938
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3007
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3231
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3439
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2244
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2015
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6232
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29459
  bin: 9.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2194
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2832
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

19-55331117-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55331117
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55331117
    reference: chr 19
allele count: 2
allele frequency: 3.930663102865453e-5
allele num: 50882
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.356-51G>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.356-51G>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.71-51G>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.356-51G>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.356-51G>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.356-51G>T
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11691
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18388
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6848
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2154
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4092
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1498
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10215
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1729
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7996
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5808
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

19-55331125-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55331125
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55331125
    reference: chr 19
allele count: 1
allele frequency: 1.953277599812485e-5
allele num: 51196
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.71-43G>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.356-43G>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.356-43G>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.356-43G>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.356-43G>T
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.356-43G>T
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11424
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18533
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5875
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3821
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3921
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4790
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3777
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2569
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4118
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8592
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1515
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2116
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

19-55331137-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55331137
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55331137
    reference: chr 19
allele count: 1
allele frequency: 1.847472657404671e-5
allele num: 54128
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.356-31T>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.356-31T>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.71-31T>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.356-31T>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.356-31T>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.356-31T>G
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 20652
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8487
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11027
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9440
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4765
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1230
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19522
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3583
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1327
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1541
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7517
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

19-55331148-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55331148
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55331148
    reference: chr 19
allele count: 2
allele frequency: 3.233629749393695e-5
allele num: 61850
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.356-20C>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.71-20C>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.356-20C>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.356-20C>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.356-20C>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.356-20C>G
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4727
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20873
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2316
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 994
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2234
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1175
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20382
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17186
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP

19-55331157-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55331157
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55331157
    reference: chr 19
allele count: 1
allele frequency: 1.415468236892764e-5
allele num: 70648
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.356-11T>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.356-11T>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.356-11T>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.356-11T>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.71-11T>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.356-11T>G
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18503
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2957
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3775
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3802
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23333
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18461
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 846
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1195
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1475
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2834
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-55331166-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55331166
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55331166
    reference: chr 19
allele count: 2
allele frequency: 2.506328479410512e-5
allele num: 79798
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.356-2A>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.356-2A>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.356-2A>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.356-2A>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.71-2A>G
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.356-2A>G
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: splice acceptor
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4461
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15014
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1855
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27705
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15022
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1208
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1226
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 998
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
hgvs: c.356-2A>G
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-55331170-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55331170
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55331170
    reference: chr 19
allele count: 1
allele frequency: 1.18993788524239e-5
allele num: 84038
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.358A>T
  hgvsp: ENSP00000375608.4:p.Asn120Tyr
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.358A>T
  hgvsp: ENSP00000326868.7:p.Asn120Tyr
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.358A>T
  hgvsp: ENSP00000443350.1:p.Asn120Tyr
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.73A>T
  hgvsp: ENSP00000350901.4:p.Asn25Tyr
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.358A>T
  hgvsp: ENSP00000384528.2:p.Asn120Tyr
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.358A>T
  hgvsp: ENSP00000442355.1:p.Asn120Tyr
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13423
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31323
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1354
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 852
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13480
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3620
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29412
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asn120Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/19-55331181-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55331181
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55331181
    reference: chr 19
allele count: 4
allele frequency: 4.311366918881631e-5
allele num: 92778
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.369A>C
  hgvsp: ENSP00000375608.4:p.Lys123Asn
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.369A>C
  hgvsp: ENSP00000442355.1:p.Lys123Asn
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.369A>C
  hgvsp: ENSP00000326868.7:p.Lys123Asn
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.369A>C
  hgvsp: ENSP00000384528.2:p.Lys123Asn
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.84A>C
  hgvsp: ENSP00000350901.4:p.Lys28Asn
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.369A>C
  hgvsp: ENSP00000443350.1:p.Lys123Asn
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9718
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35258
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9835
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1288
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4087
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 988
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 993
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Lys123Asn
num of homozygotes: 1
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

19-55331183-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55331183
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55331183
    reference: chr 19
allele count: 1
allele frequency: 1.062383137854836e-5
allele num: 94128
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.371C>T
  hgvsp: ENSP00000442355.1:p.Pro124Leu
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.371C>T
  hgvsp: ENSP00000384528.2:p.Pro124Leu
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.371C>T
  hgvsp: ENSP00000375608.4:p.Pro124Leu
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.86C>T
  hgvsp: ENSP00000350901.4:p.Pro29Leu
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.371C>T
  hgvsp: ENSP00000443350.1:p.Pro124Leu
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.371C>T
  hgvsp: ENSP00000326868.7:p.Pro124Leu
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1622
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33866
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 919
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1003
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4132
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro124Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

19-55331186-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55331186
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55331186
    reference: chr 19
allele count: 1
allele frequency: 1.042318115488847e-5
allele num: 95940
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.374C>T
  hgvsp: ENSP00000375608.4:p.Ser125Phe
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.374C>T
  hgvsp: ENSP00000442355.1:p.Ser125Phe
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.89C>T
  hgvsp: ENSP00000350901.4:p.Ser30Phe
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.374C>T
  hgvsp: ENSP00000443350.1:p.Ser125Phe
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.374C>T
  hgvsp: ENSP00000384528.2:p.Ser125Phe
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.374C>T
  hgvsp: ENSP00000326868.7:p.Ser125Phe
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36554
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5961
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34488
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser125Phe
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum

19-55331187-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55331187
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55331187
    reference: chr 19
allele count: 2
allele frequency: 2.067482633145882e-5
allele num: 96736
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.375C>G
  hgvsp: ENST00000391728.4:c.375C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.375C>G
  hgvsp: ENST00000402254.2:c.375C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.375C>G
  hgvsp: ENST00000538269.1:c.375C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.375C>G
  hgvsp: ENST00000541392.1:c.375C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.90C>G
  hgvsp: ENST00000358178.4:c.90C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.375C>G
  hgvsp: ENST00000326542.7:c.375C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 36835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7930
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 817
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4267
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34955
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser125Ser
num of homozygotes: 1
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD

19-55331192-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55331192
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55331192
    reference: chr 19
allele count: 29
allele frequency: 2.894096044070097e-4
allele num: 100204
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.380T>A
  hgvsp: ENSP00000384528.2:p.Leu127Gln
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.380T>A
  hgvsp: ENSP00000326868.7:p.Leu127Gln
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.95T>A
  hgvsp: ENSP00000350901.4:p.Leu32Gln
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.380T>A
  hgvsp: ENSP00000443350.1:p.Leu127Gln
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.380T>A
  hgvsp: ENSP00000442355.1:p.Leu127Gln
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.380T>A
  hgvsp: ENSP00000375608.4:p.Leu127Gln
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38303
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2250
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6459
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6356
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1340
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4533
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6458
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu127Gln
num of homozygotes: 9
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: African
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

19-55331193-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55331193
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55331193
    reference: chr 19
allele count: 1
allele frequency: 9.938777132861572e-6
allele num: 100616
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.381G>T
  hgvsp: ENST00000391728.4:c.381G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.381G>T
  hgvsp: ENST00000538269.1:c.381G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.381G>T
  hgvsp: ENST00000402254.2:c.381G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.381G>T
  hgvsp: ENST00000326542.7:c.381G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.96G>T
  hgvsp: ENST00000358178.4:c.96G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.381G>T
  hgvsp: ENST00000541392.1:c.381G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2291
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1463
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6238
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu127Leu
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-55331194-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55331194
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55331194
    reference: chr 19
allele count: 1
allele frequency: 9.893741219304667e-6
allele num: 101074
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.382G>A
  hgvsp: ENSP00000326868.7:p.Ala128Thr
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.382G>A
  hgvsp: ENSP00000384528.2:p.Ala128Thr
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.97G>A
  hgvsp: ENSP00000350901.4:p.Ala33Thr
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.382G>A
  hgvsp: ENSP00000442355.1:p.Ala128Thr
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.382G>A
  hgvsp: ENSP00000443350.1:p.Ala128Thr
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.382G>A
  hgvsp: ENSP00000375608.4:p.Ala128Thr
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38397
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36597
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4602
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6027
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala128Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-55331199-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55331199
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55331199
    reference: chr 19
allele count: 1
allele frequency: 9.674361008455391e-6
allele num: 103366
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.387C>T
  hgvsp: ENST00000538269.1:c.387C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.387C>T
  hgvsp: ENST00000402254.2:c.387C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.102C>T
  hgvsp: ENST00000358178.4:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.387C>T
  hgvsp: ENST00000541392.1:c.387C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.387C>T
  hgvsp: ENST00000326542.7:c.387C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.387C>T
  hgvsp: ENST00000391728.4:c.387C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7226
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4922
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37062
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 7.5e0
  variant carriers: 0
hgvs: p.His129His
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/19-55331200-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55331200
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55331200
    reference: chr 19
allele count: 1
allele frequency: 9.641713911064832e-6
allele num: 103716
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.388C>A
  hgvsp: ENSP00000375608.4:p.Pro130Thr
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.103C>A
  hgvsp: ENSP00000350901.4:p.Pro35Thr
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.388C>A
  hgvsp: ENSP00000384528.2:p.Pro130Thr
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.388C>A
  hgvsp: ENSP00000442355.1:p.Pro130Thr
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.388C>A
  hgvsp: ENSP00000443350.1:p.Pro130Thr
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.388C>A
  hgvsp: ENSP00000326868.7:p.Pro130Thr
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7299
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38744
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4760
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4843
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4893
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37298
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1959
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro130Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

19-55331200-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55331200
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55331200
    reference: chr 19
allele count: 2
allele frequency: 1.928342782212966e-5
allele num: 103716
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.388C>G
  hgvsp: ENSP00000375608.4:p.Pro130Ala
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.388C>G
  hgvsp: ENSP00000442355.1:p.Pro130Ala
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.388C>G
  hgvsp: ENSP00000384528.2:p.Pro130Ala
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.388C>G
  hgvsp: ENSP00000326868.7:p.Pro130Ala
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.388C>G
  hgvsp: ENSP00000443350.1:p.Pro130Ala
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.103C>G
  hgvsp: ENSP00000350901.4:p.Pro35Ala
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4760
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7299
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38744
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1959
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37298
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4893
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1380
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro130Ala
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-55331205-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55331205
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55331205
    reference: chr 19
allele count: 196
allele frequency: 1.865139028985783e-3
allele num: 105086
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.393T>G
  hgvsp: ENST00000541392.1:c.393T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.108T>G
  hgvsp: ENST00000358178.4:c.108T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.393T>G
  hgvsp: ENST00000391728.4:c.393T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.393T>G
  hgvsp: ENST00000326542.7:c.393T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.393T>G
  hgvsp: ENST00000538269.1:c.393T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.393T>G
  hgvsp: ENST00000402254.2:c.393T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 7607
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 3.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 2725
  bin: 3.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 4143
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 38976
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4247
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2024
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1264
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 3.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly131Gly
num of homozygotes: 30
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/19-55331206-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55331206
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55331206
    reference: chr 19
allele count: 1
allele frequency: 9.490727559174686e-6
allele num: 105366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.394C>A
  hgvsp: ENSP00000384528.2:p.Pro132Thr
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.394C>A
  hgvsp: ENSP00000443350.1:p.Pro132Thr
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.109C>A
  hgvsp: ENSP00000350901.4:p.Pro37Thr
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.394C>A
  hgvsp: ENSP00000442355.1:p.Pro132Thr
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.394C>A
  hgvsp: ENSP00000326868.7:p.Pro132Thr
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.394C>A
  hgvsp: ENSP00000375608.4:p.Pro132Thr
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7668
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39034
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2763
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4978
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1274
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1669
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4116
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro132Thr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

19-55331206-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55331206
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55331206
    reference: chr 19
allele count: 1
allele frequency: 9.490727559174686e-6
allele num: 105366
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.394C>T
  hgvsp: ENSP00000375608.4:p.Pro132Ser
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.394C>T
  hgvsp: ENSP00000326868.7:p.Pro132Ser
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.394C>T
  hgvsp: ENSP00000384528.2:p.Pro132Ser
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.109C>T
  hgvsp: ENSP00000350901.4:p.Pro37Ser
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.394C>T
  hgvsp: ENSP00000442355.1:p.Pro132Ser
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.394C>T
  hgvsp: ENSP00000443350.1:p.Pro132Ser
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2763
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39034
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7668
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1669
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4116
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37416
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro132Ser
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

19-55331207-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55331207
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 55331207
    reference: chr 19
allele count: 2
allele frequency: 1.894011136785484e-5
allele num: 105596
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000384528
  ensembl transcript: ENST00000402254
  gene symbol: KIR3DL1
  hgvsc: ENST00000402254.2:c.395C>G
  hgvsp: ENSP00000384528.2:p.Pro132Arg
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000375608
  ensembl transcript: ENST00000391728
  gene symbol: KIR3DL1
  hgvsc: ENST00000391728.4:c.395C>G
  hgvsp: ENSP00000375608.4:p.Pro132Arg
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000326868
  ensembl transcript: ENST00000326542
  gene symbol: KIR3DL1
  hgvsc: ENST00000326542.7:c.395C>G
  hgvsp: ENSP00000326868.7:p.Pro132Arg
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000442355
  ensembl transcript: ENST00000541392
  gene symbol: KIR3DL1
  hgvsc: ENST00000541392.1:c.395C>G
  hgvsp: ENSP00000442355.1:p.Pro132Arg
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000350901
  ensembl transcript: ENST00000358178
  gene symbol: KIR3DL1
  hgvsc: ENST00000358178.4:c.110C>G
  hgvsp: ENSP00000350901.4:p.Pro37Arg
  variant of: http://identifiers.org/hgnc/6338
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167633
  ensembl protein: ENSP00000443350
  ensembl transcript: ENST00000538269
  gene symbol: KIR3DL1
  hgvsc: ENST00000538269.1:c.395C>G
  hgvsp: ENSP00000443350.1:p.Pro132Arg
  variant of: http://identifiers.org/hgnc/6338
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3910
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39058
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7750
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37386
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro132Arg
num of homozygotes: 1
reference allele: C

GenotypeQuality
all individuals: 1659
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5090
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1478
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1826
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1471
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46304
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546742560168286e-5
allele num: 64652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15756
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.94e1

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

DP
type: SiteQuality
SIO_000300: 1.424971e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 2.872e0

QD
type: SiteQuality
SIO_000300: 6.87e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.3e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.333e-1

GenotypeQuality
all individuals: 1479
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 133
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5180
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1503
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1019
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46708
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.070215836173283e-5
allele num: 65142
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15862
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.074e0

VQSLOD
type: SiteQuality
SIO_000300: 6.929999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.353e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e0

DP
type: SiteQuality
SIO_000300: 1.432142e6

GenotypeQuality
all individuals: 5194
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46850
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1503
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1335
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1694
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1478
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530456075910621e-5
allele num: 65340
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15914
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.76e-1

FS
type: SiteQuality
SIO_000300: 3.046e0

DP
type: SiteQuality
SIO_000300: 1.435882e6

QD
type: SiteQuality
SIO_000300: 1.03e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.306e0

VQSLOD
type: SiteQuality
SIO_000300: 7.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.1e-2

MQ
type: SiteQuality
SIO_000300: 5.962e1

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1221
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46778
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1510
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1707
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15942
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.051199121254653e-5
allele num: 65548
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.88e-1

QD
type: SiteQuality
SIO_000300: 1.051e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.19e0

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 4.806e0

DP
type: SiteQuality
SIO_000300: 1.438413e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

GenotypeQuality
all individuals: 375
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1514
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1295
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5228
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1480
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 46777
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.163873370577281e-4
allele num: 8592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15808
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

QD
type: SiteQuality
SIO_000300: 1.142e1

MQ
type: SiteQuality
SIO_000300: 5.747e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.393e0

DP
type: SiteQuality
SIO_000300: 1.439137e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

MQRankSum
type: SiteQuality
SIO_000300: 2.29e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.44e0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1513
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1334
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5229
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46685
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1508
bin: 9.75e1
variant carriers: 30

GenotypeQuality
all individuals: 1718
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 88
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 31
allele frequency: 3.60716779148243e-3
allele num: 8594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15782
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65804
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.103e0

VQSLOD
type: SiteQuality
SIO_000300: 2.34e0

MQ
type: SiteQuality
SIO_000300: 5.933e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.91e0

QD
type: SiteQuality
SIO_000300: 1.215e1

DP
type: SiteQuality
SIO_000300: 1.440318e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.92e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.79e-1

GenotypeQuality
all individuals: 203
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46470
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1711
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5233
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1494
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519433555170632e-5
allele num: 65814
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.438585e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.014e0

VQSLOD
type: SiteQuality
SIO_000300: -2.569e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.202e0

QD
type: SiteQuality
SIO_000300: 4.5e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.956e0

GenotypeQuality
all individuals: 208
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1041
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1510
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5188
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44646
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521097624045511e-5
allele num: 65742
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15236
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.420686e6

MQ
type: SiteQuality
SIO_000300: 5.89e1

FS
type: SiteQuality
SIO_000300: 4.407e0

MQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.441e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

QD
type: SiteQuality
SIO_000300: 5.37e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.83e-1

GenotypeQuality
all individuals: 1508
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1494
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65702
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.123595505617978e-3
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15106
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.436e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

FS
type: SiteQuality
SIO_000300: 2.138e0

DP
type: SiteQuality
SIO_000300: 1.414023e6

BaseQRankSum
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SIO_000300: 1.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.046e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

QD
type: SiteQuality
SIO_000300: 1.16e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.371553970648745e-4
allele num: 14582
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10222
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.1961e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.16e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.712e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

DP
type: SiteQuality
SIO_000300: 1.3857e6

MQ
type: SiteQuality
SIO_000300: 5.718e1

MQRankSum
type: SiteQuality
SIO_000300: -1.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.308e0

QD
type: SiteQuality
SIO_000300: 9.800000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.71e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10222
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524622655892666e-5
allele num: 65590
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14582
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.1961e1

QD
type: SiteQuality
SIO_000300: 9.800000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.308e0

MQ
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SIO_000300: 5.718e1

MQRankSum
type: SiteQuality
SIO_000300: -1.37e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.712e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.71e-1

DP
type: SiteQuality
SIO_000300: 1.3857e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14196
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528164063693878e-5
allele num: 65438
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.23e-2

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.371238e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.547e0

FS
type: SiteQuality
SIO_000300: 5.718e0

MQ
type: SiteQuality
SIO_000300: 5.875e1

QD
type: SiteQuality
SIO_000300: 6.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.216e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531628120692296e-5
allele num: 65290
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13848
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10150
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.370098e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

QD
type: SiteQuality
SIO_000300: 1.329e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

VQSLOD
type: SiteQuality
SIO_000300: 9.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.839e0

MQRankSum
type: SiteQuality
SIO_000300: -2.7e-2

FS
type: SiteQuality
SIO_000300: 5.346e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.57e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.229612492770387e-5
allele num: 13832
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65238
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.47e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.905e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

FS
type: SiteQuality
SIO_000300: 1.974e0

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.370985e6

MQ
type: SiteQuality
SIO_000300: 5.866e1

QD
type: SiteQuality
SIO_000300: 8.84e0

BaseQRankSum
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SIO_000300: 1.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.17e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.715356458079135e-5
allele num: 11474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65112
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.81e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

DP
type: SiteQuality
SIO_000300: 1.375718e6

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.94e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8382
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11378
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.103277060575968e-5
allele num: 64448
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.538e1

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.16e-1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64702
num of homozygotes: 0

African
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South Asian
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allele frequency: 6.119202056051891e-5
allele num: 16342
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.610000000000001e-1

BaseQRankSum
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VQSLOD
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FS
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
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SIO_000300: 1.602e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.639653572533251e-5
allele num: 64660
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16346
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.989e0

DP
type: SiteQuality
SIO_000300: 1.574097e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

QD
type: SiteQuality
SIO_000300: 6.32e0

FS
type: SiteQuality
SIO_000300: 9.725e0

VQSLOD
type: SiteQuality
SIO_000300: -1.614e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.55e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.545021939311538e-5
allele num: 64724
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9716
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.245e0

QD
type: SiteQuality
SIO_000300: 1.024e1

DP
type: SiteQuality
SIO_000300: 1.579375e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.1e-2

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.164e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 525

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.116207951070337e-5
allele num: 16350
num of homozygotes: 0

African
type: Population
allele count: 491
allele frequency: 5.046248715313464e-2
allele num: 9730
num of homozygotes: 9

Latino
type: Population
allele count: 25
allele frequency: 2.191444600280505e-3
allele num: 11408
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 3.245348334054522e-4
allele num: 64708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8404
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.284e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.185e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.22e-2

DP
type: SiteQuality
SIO_000300: 1.588806e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.01e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9854
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.5937586132974e-5
allele num: 65306
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.499e1

MQRankSum
type: SiteQuality
SIO_000300: 8.400000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

DP
type: SiteQuality
SIO_000300: 1.627075e6

VQSLOD
type: SiteQuality
SIO_000300: 5.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531252871099133e-5
allele num: 65306
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.499e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.400000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.25e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

DP
type: SiteQuality
SIO_000300: 1.627075e6

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526950679493052e-5
allele num: 65490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.08e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.54e-1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.635708e6

QD
type: SiteQuality
SIO_000300: 9.85e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9908
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.726003490401397e-5
allele num: 11460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.72e-1

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.07e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.349e1

DP
type: SiteQuality
SIO_000300: 1.637491e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65836
num of homozygotes: 0

Latino
type: Population
allele count: 13
allele frequency: 1.132206932590141e-3
allele num: 11482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9960
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.95e0

QD
type: SiteQuality
SIO_000300: 1.426e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.646943e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
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allele frequency: 6.084205402774397e-5
allele num: 16436
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65948
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.261e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 559
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.838646202282565e-5
allele num: 10164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.787037037037037e-4
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.514692517418964e-4
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 2.711496746203905e-4
allele num: 66384
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.662413e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.1e0

MQRankSum
type: SiteQuality
SIO_000300: -1.9e-1

QD
type: SiteQuality
SIO_000300: 1.202e1

FS
type: SiteQuality
SIO_000300: 1.348e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.012501882813677e-5
allele num: 66390
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.734304543877905e-4
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-2

QD
type: SiteQuality
SIO_000300: 1.228e1

InbreedingCoeff
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SIO_000300: 2.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

FS
type: SiteQuality
SIO_000300: 1.528e0

DP
type: SiteQuality
SIO_000300: 1.662403e6

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

MQRankSum
type: SiteQuality
SIO_000300: -1.1e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506250941406838e-5
allele num: 66390
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.528e0

MQRankSum
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SIO_000300: -1.1e-1

QD
type: SiteQuality
SIO_000300: 1.228e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

VQSLOD
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SIO_000300: 1.9e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.53e0

DP
type: SiteQuality
SIO_000300: 1.662403e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66434
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 1.663994e6

MQ
type: SiteQuality
SIO_000300: 5.949e1

FS
type: SiteQuality
SIO_000300: 4.457e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-2

QD
type: SiteQuality
SIO_000300: 1.077e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505253334136135e-5
allele num: 66434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.949e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 1.663994e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e-1

FS
type: SiteQuality
SIO_000300: 4.457e0

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e-2

QD
type: SiteQuality
SIO_000300: 1.077e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.956652618904275e-4
allele num: 66440
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.7e0

FS
type: SiteQuality
SIO_000300: 2.578e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.38e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.01e-1

QD
type: SiteQuality
SIO_000300: 1.203e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.664637e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.504755025881786e-5
allele num: 66456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.45e-1

ReadPosRankSum
type: SiteQuality
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MQRankSum
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BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 1.411e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.97e-1

FS
type: SiteQuality
SIO_000300: 6.287e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

DP
type: SiteQuality
SIO_000300: 1.664201e6

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.504709741490866e-5
allele num: 66458
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.21e-2

MQRankSum
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 9.28e-1

DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.439e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 7

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 558
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 7
allele frequency: 6.065857885615251e-4
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
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VQSLOD
type: SiteQuality
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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QD
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FS
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.975e1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29507
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1068
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1893
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1650
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6002
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.599712023038157e-4
allele num: 13890
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 6.142506142506142e-4
allele num: 8140
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10786
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.272e1

MQRankSum
type: SiteQuality
SIO_000300: -4.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.59e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

DP
type: SiteQuality
SIO_000300: 2.61577e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.3e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.114e-1

QD
type: SiteQuality
SIO_000300: 1.163e1

GenotypeQuality
all individuals: 2062
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2303
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1593
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1650
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.042970379641218e-4
allele num: 9588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10786
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8140
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6002
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.114e-1

QD
type: SiteQuality
SIO_000300: 1.163e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.59e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 4.272e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.3e-1

DP
type: SiteQuality
SIO_000300: 2.61577e6

MQRankSum
type: SiteQuality
SIO_000300: -4.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.49e-1

GenotypeQuality
all individuals: 2299
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3874
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1591
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11687
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1636
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8128
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.632013578352972e-5
allele num: 61274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6002
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13718
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.291e0

DP
type: SiteQuality
SIO_000300: 2.610563e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.39e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e-2

MQ
type: SiteQuality
SIO_000300: 4.269e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

FS
type: SiteQuality
SIO_000300: 2.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e-2

QD
type: SiteQuality
SIO_000300: 8.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.59e-1

GenotypeQuality
all individuals: 3855
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1591
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.5e0
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GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1630
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variant carriers: 0

GenotypeQuality
all individuals: 29498
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1064
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6002
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61208
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8124
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.857010213556174e-4
allele num: 10770
num of homozygotes: 1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.3e-1

FS
type: SiteQuality
SIO_000300: 4.715e0

MQRankSum
type: SiteQuality
SIO_000300: -1.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.987e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

DP
type: SiteQuality
SIO_000300: 2.608133e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.506e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.69e-1

QD
type: SiteQuality
SIO_000300: 1.487e1

MQ
type: SiteQuality
SIO_000300: 4.251e1

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2440
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29498
bin: 9.75e1
variant carriers: 20

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2293
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1623
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6002
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13624
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 22
allele frequency: 3.59571129707113e-4
allele num: 61184
num of homozygotes: 1

Latino
type: Population
allele count: 2
allele frequency: 1.857355126300148e-4
allele num: 10768
num of homozygotes: 1

VQSLOD
type: SiteQuality
SIO_000300: -2.669e0

MQRankSum
type: SiteQuality
SIO_000300: -3.78e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-1

QD
type: SiteQuality
SIO_000300: 6.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.42e-1

FS
type: SiteQuality
SIO_000300: 4.778e0

DP
type: SiteQuality
SIO_000300: 2.607178e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.45e-2

MQ
type: SiteQuality
SIO_000300: 4.162e1

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1261
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
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variant carriers: 0

GenotypeQuality
all individuals: 11538
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variant carriers: 0

GenotypeQuality
all individuals: 29498
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 3856
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variant carriers: 0

GenotypeQuality
all individuals: 2059
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.268828451882845e-5
allele num: 61184
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.461841457410143e-4
allele num: 8124
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10768
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6002
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.2e0

MQRankSum
type: SiteQuality
SIO_000300: -3.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-1

FS
type: SiteQuality
SIO_000300: 4.778e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.669e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.45e-2

MQ
type: SiteQuality
SIO_000300: 4.162e1

DP
type: SiteQuality
SIO_000300: 2.607178e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.9e0

GenotypeQuality
all individuals: 128
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29491
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 89
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2284
bin: 7.75e1
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GenotypeQuality
all individuals: 10236
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variant carriers: 0

GenotypeQuality
all individuals: 1590
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60714
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10744
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.04777870913663e-4
allele num: 9544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5998
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8088
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12996
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.6419e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 4.52e1

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-1

DP
type: SiteQuality
SIO_000300: 2.583808e6

QD
type: SiteQuality
SIO_000300: 1.255e1

VQSLOD
type: SiteQuality
SIO_000300: -3.373e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.0e-3

GenotypeQuality
all individuals: 3568
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1589
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2051
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1063
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1587
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.657165583985152e-5
allele num: 60344
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8066
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5998
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10734
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.2e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.204e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.141e0

QD
type: SiteQuality
SIO_000300: 1.081e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.035e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.25e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.567755e6

MQ
type: SiteQuality
SIO_000300: 4.444e1

GenotypeQuality
all individuals: 1051
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 12

GenotypeQuality
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bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1577
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2040
bin: 8.25e1
variant carriers: 5

GenotypeQuality
all individuals: 29569
bin: 9.75e1
variant carriers: 366

GenotypeQuality
all individuals: 450
bin: 3.25e1
variant carriers: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8044
num of homozygotes: 0

African
type: Population
allele count: 427
allele frequency: 4.595350839431769e-2
allele num: 9292
num of homozygotes: 46

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.681504323925723e-4
allele num: 59668
num of homozygotes: 4

South Asian
type: Population
allele count: 9
allele frequency: 7.633587786259542e-4
allele num: 11790
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

Latino
type: Population
allele count: 29
allele frequency: 2.706738846369237e-3
allele num: 10714
num of homozygotes: 5

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5994
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.873e1

MQRankSum
type: SiteQuality
SIO_000300: -4.291e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.208e-1

FS
type: SiteQuality
SIO_000300: 1.334e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.15e0

DP
type: SiteQuality
SIO_000300: 2.550787e6

QD
type: SiteQuality
SIO_000300: 6.79e0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 2.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8297
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variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2039
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5994
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8040
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9250
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.704739174906239e-4
allele num: 11732
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.33184023889511e-5
allele num: 10716
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.710958996040534e-5
allele num: 59604
num of homozygotes: 1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.71e-2

FS
type: SiteQuality
SIO_000300: 3.87e0

VQSLOD
type: SiteQuality
SIO_000300: -1.785e0

QD
type: SiteQuality
SIO_000300: 1.641e1

MQRankSum
type: SiteQuality
SIO_000300: -8.7e-1

MQ
type: SiteQuality
SIO_000300: 4.28e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.818e0

DP
type: SiteQuality
SIO_000300: 2.539816e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.13e-1

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29492
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2039
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1588
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1051
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 8
allele frequency: 6.818956699624957e-4
allele num: 11732
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8040
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10716
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5994
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.818e0

FS
type: SiteQuality
SIO_000300: 3.87e0

MQRankSum
type: SiteQuality
SIO_000300: -8.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.71e-2

DP
type: SiteQuality
SIO_000300: 2.539816e6

MQ
type: SiteQuality
SIO_000300: 4.28e1

VQSLOD
type: SiteQuality
SIO_000300: -1.785e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e-1

QD
type: SiteQuality
SIO_000300: 1.641e1

GenotypeQuality
all individuals: 2497
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1516
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29479
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variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6789
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5994
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.717740827263983e-5
allele num: 58216
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8006
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10684
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10506
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.501875e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.693e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.65e-1

MQ
type: SiteQuality
SIO_000300: 4.363e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.038e0

MQRankSum
type: SiteQuality
SIO_000300: 2.11e0

QD
type: SiteQuality
SIO_000300: 1.23e1

VQSLOD
type: SiteQuality
SIO_000300: -2.206e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

GenotypeQuality
all individuals: 6673
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 221
bin: 4.25e1
variant carriers: 4

GenotypeQuality
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bin: 4.75e1
variant carriers: 2

GenotypeQuality
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bin: 3.25e1
variant carriers: 4

GenotypeQuality
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bin: 3.75e1
variant carriers: 4

GenotypeQuality
all individuals: 29541
bin: 9.75e1
variant carriers: 341

GenotypeQuality
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bin: 8.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10460
num of homozygotes: 0

African
type: Population
allele count: 383
allele frequency: 4.455560725919032e-2
allele num: 8596
num of homozygotes: 37

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8008
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.891204181280517e-4
allele num: 58164
num of homozygotes: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

Latino
type: Population
allele count: 27
allele frequency: 2.528563401386027e-3
allele num: 10678
num of homozygotes: 4

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5994
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.062e1

FS
type: SiteQuality
SIO_000300: 1.578e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.79e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

QD
type: SiteQuality
SIO_000300: 8.16e0

MQRankSum
type: SiteQuality
SIO_000300: -2.798e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.72e-2

DP
type: SiteQuality
SIO_000300: 2.500334e6

GenotypeQuality
all individuals: 193
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 612
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variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 1.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8006
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10682
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.502218071445249e-4
allele num: 8566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5994
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58070
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.45e0

MQRankSum
type: SiteQuality
SIO_000300: -3.288e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.602e0

QD
type: SiteQuality
SIO_000300: 8.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.79e-1

FS
type: SiteQuality
SIO_000300: 4.947e0

MQ
type: SiteQuality
SIO_000300: 4.191e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.29e-1

DP
type: SiteQuality
SIO_000300: 2.492183e6

GenotypeQuality
all individuals: 2017
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3075
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2848
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6517
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1049
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.722118895088517e-5
allele num: 58068
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5994
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8002
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.49171e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.158e0

FS
type: SiteQuality
SIO_000300: 1.331e0

QD
type: SiteQuality
SIO_000300: 1.101e1

MQ
type: SiteQuality
SIO_000300: 4.88e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

VQSLOD
type: SiteQuality
SIO_000300: -8.589e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

GenotypeQuality
all individuals: 700
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 766
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variant carriers: 0

GenotypeQuality
all individuals: 687
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1050
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 423
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7994
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5992
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.585404529628736e-4
allele num: 58018
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10682
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 7.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.979e0

MQ
type: SiteQuality
SIO_000300: 4.245e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.792e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

DP
type: SiteQuality
SIO_000300: 2.488623e6

QD
type: SiteQuality
SIO_000300: 1.298e1

GenotypeQuality
all individuals: 6913
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4150
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variant carriers: 0

GenotypeQuality
all individuals: 1138
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1551
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3850
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 6.831067695880866e-5
allele num: 29278
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5296
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4220
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4174
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3208
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.82e1

MQ
type: SiteQuality
SIO_000300: 2.778e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.16e-2

DP
type: SiteQuality
SIO_000300: 6.26685e5

VQSLOD
type: SiteQuality
SIO_000300: -4.885e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4336
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.876876876876877e-4
allele num: 5328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4230
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4204
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.162e0

MQRankSum
type: SiteQuality
SIO_000300: -2.95e-1

MQ
type: SiteQuality
SIO_000300: 2.306e1

DP
type: SiteQuality
SIO_000300: 6.39785e5

ClippingRankSum
type: SiteQuality
SIO_000300: -6.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.09e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.95e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.062e0

QD
type: SiteQuality
SIO_000300: 3.16e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 31124
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4504
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.17296827466319e-4
allele num: 4602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5546
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4520
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.214e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.58e-2

DP
type: SiteQuality
SIO_000300: 7.25579e5

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -5.02e-1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

QD
type: SiteQuality
SIO_000300: 8.17e0

MQ
type: SiteQuality
SIO_000300: 2.755e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4428
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 35384
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6218
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3930
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 462
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 3.795066413662239e-4
allele num: 5270
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5134
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.21e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.7e-3

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 2.677e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.66945e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2925
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GenotypeQuality
all individuals: 1028
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6922
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.485336514564072e-5
allele num: 40236
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6434
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6324
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.14e0

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 9.64996e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

VQSLOD
type: SiteQuality
SIO_000300: -6.551e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 2.582e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.286e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.13e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1006
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GenotypeQuality
all individuals: 318
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GenotypeQuality
all individuals: 313
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GenotypeQuality
all individuals: 3378
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GenotypeQuality
all individuals: 375
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7440
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.653927813163482e-4
allele num: 7536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4934
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6374
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45286
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 2.584e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -5.645e0

QD
type: SiteQuality
SIO_000300: 9.52e0

MQRankSum
type: SiteQuality
SIO_000300: 9.340000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.053097e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.44e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

GenotypeQuality
all individuals: 1258
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 516
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8296
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.257861635220126e-4
allele num: 7950
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5130
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7834
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.75e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.964e0

DP
type: SiteQuality
SIO_000300: 1.091084e6

MQRankSum
type: SiteQuality
SIO_000300: -1.351e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.063e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.343e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.550000000000001e0

MQ
type: SiteQuality
SIO_000300: 2.747e1

GenotypeQuality
all individuals: 55
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 33443
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 3.25e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7104
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 7.656967840735069e-5
allele num: 52240
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9992
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8870
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 2.602e1

DP
type: SiteQuality
SIO_000300: 1.168761e6

QD
type: SiteQuality
SIO_000300: 1.111e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -5.82e0

GenotypeQuality
all individuals: 619
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 9237
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9032
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52942
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 704
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.177301624676242e-4
allele num: 8494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7198
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.69e-1

MQ
type: SiteQuality
SIO_000300: 2.672e1

DP
type: SiteQuality
SIO_000300: 1.181442e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -5.266e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.199e0

QD
type: SiteQuality
SIO_000300: 9.890000000000001e0

GenotypeQuality
all individuals: 558
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8378
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1298
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4229
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variant carriers: 0

GenotypeQuality
all individuals: 1336
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9212
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.446438692612885e-5
allele num: 10586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53914
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.623e0

QD
type: SiteQuality
SIO_000300: 1.241e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.992e0

MQ
type: SiteQuality
SIO_000300: 2.84e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.19869e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.51e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

GenotypeQuality
all individuals: 558
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1305
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1681
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1358
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1053
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 461
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variant carriers: 0

GenotypeQuality
all individuals: 447
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variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8017
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5616
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.308402585410896e-4
allele num: 8664
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10742
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9286
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.51e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.74e-1

MQ
type: SiteQuality
SIO_000300: 2.732e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -5.503e0

DP
type: SiteQuality
SIO_000300: 1.206328e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.29e-1

QD
type: SiteQuality
SIO_000300: 1.728e1

GenotypeQuality
all individuals: 437
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36737
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 69
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 429
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variant carriers: 0

GenotypeQuality
all individuals: 1463
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1806
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 489
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variant carriers: 2

GenotypeQuality
all individuals: 478
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variant carriers: 0

GenotypeQuality
all individuals: 1106
bin: 8.25e1
variant carriers: 1

Latino
type: Population
allele count: 2
allele frequency: 2.072968490878939e-4
allele num: 9648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.334850802005904e-5
allele num: 56234
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5730
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.666666666666667e-3
allele num: 750
num of homozygotes: 1

South Asian
type: Population
allele count: 22
allele frequency: 1.92880939856216e-3
allele num: 11406
num of homozygotes: 7

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8830
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 2.841e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.75e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.238296e6

QD
type: SiteQuality
SIO_000300: 1.576e1

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.046e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.67e-1

GenotypeQuality
all individuals: 274
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1110
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1811
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1331
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4553
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variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8854
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7630
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.69414014953921e-5
allele num: 11502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9696
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5748
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-1

DP
type: SiteQuality
SIO_000300: 1.242712e6

VQSLOD
type: SiteQuality
SIO_000300: -5.682e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

QD
type: SiteQuality
SIO_000300: 6.82e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 2.8e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.402e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.52e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1471
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
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variant carriers: 0

GenotypeQuality
all individuals: 1116
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1830
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variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9748
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5762
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56684
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8892
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7660
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 2.791e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.866e0

QD
type: SiteQuality
SIO_000300: 1.169e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.53e-1

DP
type: SiteQuality
SIO_000300: 1.248077e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.786e0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1224
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 5046
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GenotypeQuality
all individuals: 4841
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5830
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12098
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.728369456254969e-5
allele num: 57858
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7772
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9058
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9968
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.575e0

QD
type: SiteQuality
SIO_000300: 1.356e1

MQ
type: SiteQuality
SIO_000300: 2.713e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.893e0

VQSLOD
type: SiteQuality
SIO_000300: -6.952e0

MQRankSum
type: SiteQuality
SIO_000300: -3.4e0

DP
type: SiteQuality
SIO_000300: 1.271619e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.74e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

GenotypeQuality
all individuals: 656
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variant carriers: 0

GenotypeQuality
all individuals: 65
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GenotypeQuality
all individuals: 1230
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 533
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GenotypeQuality
all individuals: 1600
bin: 7.25e1
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GenotypeQuality
all individuals: 1380
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GenotypeQuality
all individuals: 512
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GenotypeQuality
all individuals: 347
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.722534192303717e-5
allele num: 58054
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10008
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7788
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12180
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9070
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5834
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.412e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.39e-1

QD
type: SiteQuality
SIO_000300: 1.076e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

DP
type: SiteQuality
SIO_000300: 1.275463e6

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.812e0

MQ
type: SiteQuality
SIO_000300: 2.84e1

GenotypeQuality
all individuals: 73
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4843
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1230
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1600
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10008
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.445068384607434e-5
allele num: 58054
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5834
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9070
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7788
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.275463e6

MQ
type: SiteQuality
SIO_000300: 2.84e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.412e0

QD
type: SiteQuality
SIO_000300: 1.076e1

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.44e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.812e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.39e-1

GenotypeQuality
all individuals: 37369
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1663
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 345
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1521
bin: 9.75e1
variant carriers: 139

GenotypeQuality
all individuals: 4963
bin: 6.75e1
variant carriers: 4

GenotypeQuality
all individuals: 37
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 60
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 540
bin: 9.25e1
variant carriers: 2

South Asian
type: Population
allele count: 3
allele frequency: 2.401152553225548e-4
allele num: 12494
num of homozygotes: 1

East Asian
type: Population
allele count: 1
allele frequency: 1.271617497456765e-4
allele num: 7864
num of homozygotes: 0

African
type: Population
allele count: 31
allele frequency: 3.390201224846894e-3
allele num: 9144
num of homozygotes: 3

European (Finnish)
type: Population
allele count: 23
allele frequency: 3.922237380627558e-3
allele num: 5864
num of homozygotes: 5

Latino
type: Population
allele count: 6
allele frequency: 5.918327086210298e-4
allele num: 10138
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 127
allele frequency: 2.16023133185916e-3
allele num: 58790
num of homozygotes: 18

Other
type: Population
allele count: 5
allele frequency: 6.313131313131313e-3
allele num: 792
num of homozygotes: 1

DP
type: SiteQuality
SIO_000300: 1.29432e6

MQRankSum
type: SiteQuality
SIO_000300: 2.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.8e-1

MQ
type: SiteQuality
SIO_000300: 2.814e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.206e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.319e1

VQSLOD
type: SiteQuality
SIO_000300: 2.29e0

GenotypeQuality
all individuals: 37416
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1498
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2031
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58926
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.267748478701826e-4
allele num: 7888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.46e-1

MQ
type: SiteQuality
SIO_000300: 2.8e1

VQSLOD
type: SiteQuality
SIO_000300: -4.552e0

MQRankSum
type: SiteQuality
SIO_000300: -1.006e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.779e0

QD
type: SiteQuality
SIO_000300: 9.609999999999999e0

DP
type: SiteQuality
SIO_000300: 1.297248e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

GenotypeQuality
all individuals: 40
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4978
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1498
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 228
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2031
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1274
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.69704374978787e-5
allele num: 58926
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12556
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.297248e6

VQSLOD
type: SiteQuality
SIO_000300: -4.552e0

MQ
type: SiteQuality
SIO_000300: 2.8e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.779e0

MQRankSum
type: SiteQuality
SIO_000300: -1.006e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.609999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3