19-13136022-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136022
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136022
    reference: chr 19
allele count: 1
allele frequency: 8.263916435277007e-6
allele num: 121008
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.212C>T
  hgvsp: ENSP00000467785.1:p.Ala71Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.74C>T
  hgvsp: ENSP00000466605.1:p.Ala25Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.212C>T
  hgvsp: ENSP00000351354.3:p.Ala71Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.224C>T
  hgvsp: ENSP00000353219.4:p.Ala75Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.191C>T
  hgvsp: ENSP00000466389.1:p.Ala64Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.74C>T
  hgvsp: ENSP00000465616.1:p.Ala25Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.215C>T
  hgvsp: ENSP00000467512.1:p.Ala72Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.263C>T
  hgvsp: ENSP00000465094.1:p.Ala88Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.215C>T
  hgvsp: ENSP00000380781.2:p.Ala72Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.74C>T
  hgvsp: ENSP00000468707.1:p.Ala25Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.191C>T
  hgvsp: ENSP00000468794.1:p.Ala64Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.74C>T
  hgvsp: ENSP00000466735.1:p.Ala25Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*46C>T
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 13162
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3162
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43232
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala72Val
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/19-13136027-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136027
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136027
    reference: chr 19
allele count: 1
allele frequency: 8.265692417053776e-6
allele num: 120982
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.220C>A
  hgvsp: ENST00000592199.1:c.220C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.79C>A
  hgvsp: ENST00000590027.1:c.79C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.196C>A
  hgvsp: ENST00000587760.1:c.196C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.217C>A
  hgvsp: ENST00000587260.1:c.217C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.79C>A
  hgvsp: ENST00000588228.1:c.79C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*51C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.79C>A
  hgvsp: ENST00000585382.1:c.79C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.79C>A
  hgvsp: ENST00000586873.1:c.79C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.268C>A
  hgvsp: ENST00000591028.1:c.268C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.196C>A
  hgvsp: ENST00000585575.1:c.196C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.217C>A
  hgvsp: ENST00000358552.3:c.217C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.220C>A
  hgvsp: ENST00000397661.2:c.220C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.229C>A
  hgvsp: ENST00000360105.4:c.229C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 13193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3161
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg74Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ

19-13136029-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136029
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136029
    reference: chr 19
allele count: 5
allele frequency: 4.131411951348493e-5
allele num: 121024
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.81G>C
  hgvsp: ENST00000588228.1:c.81G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.198G>C
  hgvsp: ENST00000587760.1:c.198G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.270G>C
  hgvsp: ENST00000591028.1:c.270G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.81G>C
  hgvsp: ENST00000590027.1:c.81G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.198G>C
  hgvsp: ENST00000585575.1:c.198G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.222G>C
  hgvsp: ENST00000397661.2:c.222G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.81G>C
  hgvsp: ENST00000585382.1:c.81G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.222G>C
  hgvsp: ENST00000592199.1:c.222G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.219G>C
  hgvsp: ENST00000358552.3:c.219G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.81G>C
  hgvsp: ENST00000586873.1:c.81G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.219G>C
  hgvsp: ENST00000587260.1:c.219G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*53G>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.231G>C
  hgvsp: ENST00000360105.4:c.231G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43198
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13218
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg74Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

19-13136038-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136038
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136038
    reference: chr 19
allele count: 1
allele frequency: 8.265692417053776e-6
allele num: 120982
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.228C>T
  hgvsp: ENST00000358552.3:c.228C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.231C>T
  hgvsp: ENST00000397661.2:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.240C>T
  hgvsp: ENST00000360105.4:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.279C>T
  hgvsp: ENST00000591028.1:c.279C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.228C>T
  hgvsp: ENST00000587260.1:c.228C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.90C>T
  hgvsp: ENST00000585382.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.90C>T
  hgvsp: ENST00000588228.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.231C>T
  hgvsp: ENST00000592199.1:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.207C>T
  hgvsp: ENST00000585575.1:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.90C>T
  hgvsp: ENST00000590027.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.207C>T
  hgvsp: ENST00000587760.1:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.90C>T
  hgvsp: ENST00000586873.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*62C>T
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala77Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

19-13136046-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136046
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136046
    reference: chr 19
allele count: 1
allele frequency: 8.267879288962381e-6
allele num: 120950
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.98G>A
  hgvsp: ENSP00000466605.1:p.Arg33His
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.239G>A
  hgvsp: ENSP00000380781.2:p.Arg80His
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.98G>A
  hgvsp: ENSP00000466735.1:p.Arg33His
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.239G>A
  hgvsp: ENSP00000467512.1:p.Arg80His
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.98G>A
  hgvsp: ENSP00000468707.1:p.Arg33His
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.215G>A
  hgvsp: ENSP00000466389.1:p.Arg72His
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*70G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.215G>A
  hgvsp: ENSP00000468794.1:p.Arg72His
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.98G>A
  hgvsp: ENSP00000465616.1:p.Arg33His
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.236G>A
  hgvsp: ENSP00000351354.3:p.Arg79His
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.236G>A
  hgvsp: ENSP00000467785.1:p.Arg79His
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.287G>A
  hgvsp: ENSP00000465094.1:p.Arg96His
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.248G>A
  hgvsp: ENSP00000353219.4:p.Arg83His
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg80His
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP

19-13136056-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136056
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136056
    reference: chr 19
allele count: 2
allele frequency: 1.654232353476369e-5
allele num: 120902
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.246C>T
  hgvsp: ENST00000358552.3:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.108C>T
  hgvsp: ENST00000590027.1:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.258C>T
  hgvsp: ENST00000360105.4:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.108C>T
  hgvsp: ENST00000586873.1:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.108C>T
  hgvsp: ENST00000585382.1:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.249C>T
  hgvsp: ENST00000397661.2:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.225C>T
  hgvsp: ENST00000587760.1:c.225C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.297C>T
  hgvsp: ENST00000591028.1:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.249C>T
  hgvsp: ENST00000592199.1:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.225C>T
  hgvsp: ENST00000585575.1:c.225C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.246C>T
  hgvsp: ENST00000587260.1:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*80C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.108C>T
  hgvsp: ENST00000588228.1:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42978
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13260
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile83Ile
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP

19-13136057-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136057
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136057
    reference: chr 19
allele count: 1
allele frequency: 8.271845945141119e-6
allele num: 120892
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.259C>G
  hgvsp: ENSP00000353219.4:p.Arg87Gly
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.298C>G
  hgvsp: ENSP00000465094.1:p.Arg100Gly
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.109C>G
  hgvsp: ENSP00000466605.1:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.250C>G
  hgvsp: ENSP00000380781.2:p.Arg84Gly
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.109C>G
  hgvsp: ENSP00000468707.1:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.109C>G
  hgvsp: ENSP00000465616.1:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*81C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.247C>G
  hgvsp: ENSP00000467785.1:p.Arg83Gly
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.250C>G
  hgvsp: ENSP00000467512.1:p.Arg84Gly
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.226C>G
  hgvsp: ENSP00000466389.1:p.Arg76Gly
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.226C>G
  hgvsp: ENSP00000468794.1:p.Arg76Gly
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.109C>G
  hgvsp: ENSP00000466735.1:p.Arg37Gly
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.247C>G
  hgvsp: ENSP00000351354.3:p.Arg83Gly
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42959
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg84Gly
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ

19-13136059-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136059
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136059
    reference: chr 19
allele count: 10
allele frequency: 8.272667107875579e-5
allele num: 120880
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.111G>T
  hgvsp: ENST00000585382.1:c.111G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.228G>T
  hgvsp: ENST00000585575.1:c.228G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.228G>T
  hgvsp: ENST00000587760.1:c.228G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.252G>T
  hgvsp: ENST00000397661.2:c.252G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.111G>T
  hgvsp: ENST00000590027.1:c.111G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.261G>T
  hgvsp: ENST00000360105.4:c.261G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*83G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.249G>T
  hgvsp: ENST00000587260.1:c.249G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.111G>T
  hgvsp: ENST00000588228.1:c.111G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.252G>T
  hgvsp: ENST00000592199.1:c.252G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.249G>T
  hgvsp: ENST00000358552.3:c.249G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.300G>T
  hgvsp: ENST00000591028.1:c.300G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.111G>T
  hgvsp: ENST00000586873.1:c.111G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42933
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Arg84Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD

19-13136071-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136071
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136071
    reference: chr 19
allele count: 3
allele frequency: 2.482621648460775e-5
allele num: 120840
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.240C>T
  hgvsp: ENST00000587760.1:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.273C>T
  hgvsp: ENST00000360105.4:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.264C>T
  hgvsp: ENST00000397661.2:c.264C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.123C>T
  hgvsp: ENST00000586873.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.240C>T
  hgvsp: ENST00000585575.1:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.261C>T
  hgvsp: ENST00000587260.1:c.261C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.264C>T
  hgvsp: ENST00000592199.1:c.264C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.261C>T
  hgvsp: ENST00000358552.3:c.261C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.123C>T
  hgvsp: ENST00000590027.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.123C>T
  hgvsp: ENST00000585382.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.312C>T
  hgvsp: ENST00000591028.1:c.312C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*95C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.123C>T
  hgvsp: ENST00000588228.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg88Arg
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ

19-13136072-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136072
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136072
    reference: chr 19
allele count: 1
allele frequency: 8.275679433281473e-6
allele num: 120836
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*96G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.124G>A
  hgvsp: ENSP00000466735.1:p.Glu42Lys
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.124G>A
  hgvsp: ENSP00000466605.1:p.Glu42Lys
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.262G>A
  hgvsp: ENSP00000351354.3:p.Glu88Lys
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.274G>A
  hgvsp: ENSP00000353219.4:p.Glu92Lys
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.124G>A
  hgvsp: ENSP00000465616.1:p.Glu42Lys
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.265G>A
  hgvsp: ENSP00000380781.2:p.Glu89Lys
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.313G>A
  hgvsp: ENSP00000465094.1:p.Glu105Lys
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.265G>A
  hgvsp: ENSP00000467512.1:p.Glu89Lys
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.241G>A
  hgvsp: ENSP00000468794.1:p.Glu81Lys
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.124G>A
  hgvsp: ENSP00000468707.1:p.Glu42Lys
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.241G>A
  hgvsp: ENSP00000466389.1:p.Glu81Lys
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.262G>A
  hgvsp: ENSP00000467785.1:p.Glu88Lys
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu89Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS

19-13136095-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136095
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136095
    reference: chr 19
allele count: 2
allele frequency: 1.656643970644269e-5
allele num: 120726
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.264G>A
  hgvsp: ENST00000585575.1:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.336G>A
  hgvsp: ENST00000591028.1:c.336G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.288G>A
  hgvsp: ENST00000592199.1:c.288G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.288G>A
  hgvsp: ENST00000397661.2:c.288G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.264G>A
  hgvsp: ENST00000587760.1:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.147G>A
  hgvsp: ENST00000590027.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.147G>A
  hgvsp: ENST00000585382.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.297G>A
  hgvsp: ENST00000360105.4:c.297G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.147G>A
  hgvsp: ENST00000588228.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.147G>A
  hgvsp: ENST00000586873.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*119G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.285G>A
  hgvsp: ENST00000358552.3:c.285G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.285G>A
  hgvsp: ENST00000587260.1:c.285G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13247
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr96Thr
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-13136100-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136100
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136100
    reference: chr 19
allele count: 1
allele frequency: 8.285416010737898e-6
allele num: 120694
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.269A>G
  hgvsp: ENSP00000468794.1:p.Lys90Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.290A>G
  hgvsp: ENSP00000351354.3:p.Lys97Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.341A>G
  hgvsp: ENSP00000465094.1:p.Lys114Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.152A>G
  hgvsp: ENSP00000465616.1:p.Lys51Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.152A>G
  hgvsp: ENSP00000468707.1:p.Lys51Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.290A>G
  hgvsp: ENSP00000467785.1:p.Lys97Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.293A>G
  hgvsp: ENSP00000380781.2:p.Lys98Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.269A>G
  hgvsp: ENSP00000466389.1:p.Lys90Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.293A>G
  hgvsp: ENSP00000467512.1:p.Lys98Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.152A>G
  hgvsp: ENSP00000466605.1:p.Lys51Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.302A>G
  hgvsp: ENSP00000353219.4:p.Lys101Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.152A>G
  hgvsp: ENSP00000466735.1:p.Lys51Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*124A>G
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42636
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys98Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

19-13136101-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136101
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136101
    reference: chr 19
allele count: 1
allele frequency: 8.285416010737898e-6
allele num: 120694
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.270G>A
  hgvsp: ENST00000587760.1:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.153G>A
  hgvsp: ENST00000588228.1:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.291G>A
  hgvsp: ENST00000587260.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.153G>A
  hgvsp: ENST00000586873.1:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.342G>A
  hgvsp: ENST00000591028.1:c.342G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.291G>A
  hgvsp: ENST00000358552.3:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.294G>A
  hgvsp: ENST00000592199.1:c.294G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*125G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.294G>A
  hgvsp: ENST00000397661.2:c.294G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.153G>A
  hgvsp: ENST00000585382.1:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.303G>A
  hgvsp: ENST00000360105.4:c.303G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.153G>A
  hgvsp: ENST00000590027.1:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.270G>A
  hgvsp: ENST00000585575.1:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13250
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys98Lys
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

19-13136103-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136103
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136103
    reference: chr 19
allele count: 1
allele frequency: 8.286651861182008e-6
allele num: 120676
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.344A>G
  hgvsp: ENSP00000465094.1:p.Lys115Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*127A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.155A>G
  hgvsp: ENSP00000468707.1:p.Lys52Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.155A>G
  hgvsp: ENSP00000465616.1:p.Lys52Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.272A>G
  hgvsp: ENSP00000466389.1:p.Lys91Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.293A>G
  hgvsp: ENSP00000351354.3:p.Lys98Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.293A>G
  hgvsp: ENSP00000467785.1:p.Lys98Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.296A>G
  hgvsp: ENSP00000380781.2:p.Lys99Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.155A>G
  hgvsp: ENSP00000466605.1:p.Lys52Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.296A>G
  hgvsp: ENSP00000467512.1:p.Lys99Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.155A>G
  hgvsp: ENSP00000466735.1:p.Lys52Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.305A>G
  hgvsp: ENSP00000353219.4:p.Lys102Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.272A>G
  hgvsp: ENSP00000468794.1:p.Lys91Arg
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42607
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13242
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3201
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys99Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

19-13136107-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136107
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136107
    reference: chr 19
allele count: 1
allele frequency: 8.288025460814215e-6
allele num: 120656
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.276C>G
  hgvsp: ENST00000585575.1:c.276C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.300C>G
  hgvsp: ENST00000592199.1:c.300C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.348C>G
  hgvsp: ENST00000591028.1:c.348C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.159C>G
  hgvsp: ENST00000588228.1:c.159C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.297C>G
  hgvsp: ENST00000358552.3:c.297C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.309C>G
  hgvsp: ENST00000360105.4:c.309C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.159C>G
  hgvsp: ENST00000586873.1:c.159C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.159C>G
  hgvsp: ENST00000585382.1:c.159C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.159C>G
  hgvsp: ENST00000590027.1:c.159C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.297C>G
  hgvsp: ENST00000587260.1:c.297C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.300C>G
  hgvsp: ENST00000397661.2:c.300C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*131C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.276C>G
  hgvsp: ENST00000587760.1:c.276C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13253
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42574
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro100Pro
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

19-13136107-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136107
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136107
    reference: chr 19
allele count: 1
allele frequency: 8.288025460814215e-6
allele num: 120656
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.300C>T
  hgvsp: ENST00000397661.2:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.348C>T
  hgvsp: ENST00000591028.1:c.348C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.159C>T
  hgvsp: ENST00000585382.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.159C>T
  hgvsp: ENST00000586873.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.297C>T
  hgvsp: ENST00000358552.3:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.300C>T
  hgvsp: ENST00000592199.1:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.297C>T
  hgvsp: ENST00000587260.1:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.276C>T
  hgvsp: ENST00000587760.1:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.159C>T
  hgvsp: ENST00000588228.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.159C>T
  hgvsp: ENST00000590027.1:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.309C>T
  hgvsp: ENST00000360105.4:c.309C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.276C>T
  hgvsp: ENST00000585575.1:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*131C>T
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42574
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13253
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro100Pro
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

19-13136110-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136110
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136110
    reference: chr 19
allele count: 3
allele frequency: 2.486613729423271e-5
allele num: 120646
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.162C>G
  hgvsp: ENST00000588228.1:c.162C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.312C>G
  hgvsp: ENST00000360105.4:c.312C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.300C>G
  hgvsp: ENST00000587260.1:c.300C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.279C>G
  hgvsp: ENST00000585575.1:c.279C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.162C>G
  hgvsp: ENST00000585382.1:c.162C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.303C>G
  hgvsp: ENST00000592199.1:c.303C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.300C>G
  hgvsp: ENST00000358552.3:c.300C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.279C>G
  hgvsp: ENST00000587760.1:c.279C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.351C>G
  hgvsp: ENST00000591028.1:c.351C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.162C>G
  hgvsp: ENST00000586873.1:c.162C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*134C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.162C>G
  hgvsp: ENST00000590027.1:c.162C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.303C>G
  hgvsp: ENST00000397661.2:c.303C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro101Pro
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-13136131-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136131
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136131
    reference: chr 19
allele count: 2
allele frequency: 1.659503144758459e-5
allele num: 120518
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.183C>T
  hgvsp: ENST00000585382.1:c.183C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.183C>T
  hgvsp: ENST00000586873.1:c.183C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.372C>T
  hgvsp: ENST00000591028.1:c.372C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.183C>T
  hgvsp: ENST00000588228.1:c.183C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.300C>T
  hgvsp: ENST00000585575.1:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*155C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.183C>T
  hgvsp: ENST00000590027.1:c.183C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.333C>T
  hgvsp: ENST00000360105.4:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.321C>T
  hgvsp: ENST00000358552.3:c.321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.324C>T
  hgvsp: ENST00000592199.1:c.324C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.300C>T
  hgvsp: ENST00000587760.1:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.324C>T
  hgvsp: ENST00000397661.2:c.324C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.321C>T
  hgvsp: ENST00000587260.1:c.321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13318
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro108Pro
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

19-13136167-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136167
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136167
    reference: chr 19
allele count: 6
allele frequency: 4.987531172069826e-5
allele num: 120300
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.219G>A
  hgvsp: ENST00000590027.1:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.357G>A
  hgvsp: ENST00000358552.3:c.357G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.360G>A
  hgvsp: ENST00000592199.1:c.360G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.336G>A
  hgvsp: ENST00000587760.1:c.336G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.336G>A
  hgvsp: ENST00000585575.1:c.336G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.219G>A
  hgvsp: ENST00000586873.1:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.357G>A
  hgvsp: ENST00000587260.1:c.357G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.219G>A
  hgvsp: ENST00000585382.1:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.408G>A
  hgvsp: ENST00000591028.1:c.408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.219G>A
  hgvsp: ENST00000588228.1:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.369G>A
  hgvsp: ENST00000360105.4:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*191G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.360G>A
  hgvsp: ENST00000397661.2:c.360G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu120Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

19-13136200-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136200
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136200
    reference: chr 19
allele count: 1
allele frequency: 8.366520531441385e-6
allele num: 119524
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*224G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.393G>A
  hgvsp: ENST00000592199.1:c.393G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.441G>A
  hgvsp: ENST00000591028.1:c.441G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.234+18G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.369G>A
  hgvsp: ENST00000585575.1:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.393G>A
  hgvsp: ENST00000397661.2:c.393G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.252G>A
  hgvsp: ENST00000586873.1:c.252G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.390G>A
  hgvsp: ENST00000587260.1:c.390G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.252G>A
  hgvsp: ENST00000590027.1:c.252G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.369G>A
  hgvsp: ENST00000587760.1:c.369G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.390G>A
  hgvsp: ENST00000358552.3:c.390G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.402G>A
  hgvsp: ENST00000360105.4:c.402G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.252G>A
  hgvsp: ENST00000588228.1:c.252G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3362
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu131Leu
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

19-13136200-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136200
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136200
    reference: chr 19
allele count: 4
allele frequency: 3.346608212576554e-5
allele num: 119524
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.402G>C
  hgvsp: ENST00000360105.4:c.402G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.441G>C
  hgvsp: ENST00000591028.1:c.441G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.369G>C
  hgvsp: ENST00000585575.1:c.369G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.393G>C
  hgvsp: ENST00000397661.2:c.393G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*224G>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.252G>C
  hgvsp: ENST00000586873.1:c.252G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.390G>C
  hgvsp: ENST00000358552.3:c.390G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.390G>C
  hgvsp: ENST00000587260.1:c.390G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.393G>C
  hgvsp: ENST00000592199.1:c.393G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.252G>C
  hgvsp: ENST00000588228.1:c.252G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.252G>C
  hgvsp: ENST00000590027.1:c.252G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.369G>C
  hgvsp: ENST00000587760.1:c.369G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.234+18G>C
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41042
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3362
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu131Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

19-13136204-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136204
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136204
    reference: chr 19
allele count: 1
allele frequency: 8.362742310458446e-6
allele num: 119578
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.373A>G
  hgvsp: ENSP00000466389.1:p.Met125Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*228A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.256A>G
  hgvsp: ENSP00000465616.1:p.Met86Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.397A>G
  hgvsp: ENSP00000380781.2:p.Met133Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.394A>G
  hgvsp: ENSP00000467785.1:p.Met132Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.397A>G
  hgvsp: ENSP00000467512.1:p.Met133Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.406A>G
  hgvsp: ENSP00000353219.4:p.Met136Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.445A>G
  hgvsp: ENSP00000465094.1:p.Met149Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.256A>G
  hgvsp: ENSP00000468707.1:p.Met86Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.394A>G
  hgvsp: ENSP00000351354.3:p.Met132Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.256A>G
  hgvsp: ENSP00000466735.1:p.Met86Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.234+22A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.373A>G
  hgvsp: ENSP00000468794.1:p.Met125Val
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41105
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13297
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met133Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

19-13136234-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136234
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136234
    reference: chr 19
allele count: 1
allele frequency: 8.341814177747376e-6
allele num: 119878
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.427G>A
  hgvsp: ENSP00000380781.2:p.Glu143Lys
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.234+52G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.424G>A
  hgvsp: ENSP00000351354.3:p.Glu142Lys
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.286G>A
  hgvsp: ENSP00000465616.1:p.Glu96Lys
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.286G>A
  hgvsp: ENSP00000466735.1:p.Glu96Lys
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*258G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.286G>A
  hgvsp: ENSP00000468707.1:p.Glu96Lys
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.424G>A
  hgvsp: ENSP00000467785.1:p.Glu142Lys
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.475G>A
  hgvsp: ENSP00000465094.1:p.Glu159Lys
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.427G>A
  hgvsp: ENSP00000467512.1:p.Glu143Lys
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.436G>A
  hgvsp: ENSP00000353219.4:p.Glu146Lys
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.403G>A
  hgvsp: ENSP00000466389.1:p.Glu135Lys
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.403G>A
  hgvsp: ENSP00000468794.1:p.Glu135Lys
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3386
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13560
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu143Lys
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP

19-13136245-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136245
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136245
    reference: chr 19
allele count: 1
allele frequency: 8.330417687142833e-6
allele num: 120042
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.297T>C
  hgvsp: ENST00000590027.1:c.297T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.297T>C
  hgvsp: ENST00000588228.1:c.297T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.486T>C
  hgvsp: ENST00000591028.1:c.486T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.438T>C
  hgvsp: ENST00000397661.2:c.438T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.435T>C
  hgvsp: ENST00000358552.3:c.435T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*269T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.234+63T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.438T>C
  hgvsp: ENST00000592199.1:c.438T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.435T>C
  hgvsp: ENST00000587260.1:c.435T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.414T>C
  hgvsp: ENST00000587760.1:c.414T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.297T>C
  hgvsp: ENST00000586873.1:c.297T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.447T>C
  hgvsp: ENST00000360105.4:c.447T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.414T>C
  hgvsp: ENST00000585575.1:c.414T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41439
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp146Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

19-13136259-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136259
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136259
    reference: chr 19
allele count: 1
allele frequency: 8.321544478655239e-6
allele num: 120170
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.311A>T
  hgvsp: ENSP00000468707.1:p.Tyr104Phe
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.500A>T
  hgvsp: ENSP00000465094.1:p.Tyr167Phe
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.449A>T
  hgvsp: ENSP00000351354.3:p.Tyr150Phe
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*283A>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.234+77A>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.452A>T
  hgvsp: ENSP00000467512.1:p.Tyr151Phe
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.428A>T
  hgvsp: ENSP00000466389.1:p.Tyr143Phe
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.311A>T
  hgvsp: ENSP00000465616.1:p.Tyr104Phe
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.311A>T
  hgvsp: ENSP00000466735.1:p.Tyr104Phe
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.428A>T
  hgvsp: ENSP00000468794.1:p.Tyr143Phe
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.461A>T
  hgvsp: ENSP00000353219.4:p.Tyr154Phe
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.452A>T
  hgvsp: ENSP00000380781.2:p.Tyr151Phe
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.449A>T
  hgvsp: ENSP00000467785.1:p.Tyr150Phe
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3391
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13841
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr151Phe
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

19-13136266-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136266
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136266
    reference: chr 19
allele count: 1
allele frequency: 8.320713584396998e-6
allele num: 120182
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.435G>T
  hgvsp: ENST00000587760.1:c.435G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.318G>T
  hgvsp: ENST00000590027.1:c.318G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.435G>T
  hgvsp: ENST00000585575.1:c.435G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.318G>T
  hgvsp: ENST00000588228.1:c.318G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.456G>T
  hgvsp: ENST00000358552.3:c.456G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.459G>T
  hgvsp: ENST00000397661.2:c.459G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.507G>T
  hgvsp: ENST00000591028.1:c.507G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.318G>T
  hgvsp: ENST00000586873.1:c.318G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.459G>T
  hgvsp: ENST00000592199.1:c.459G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*290G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.456G>T
  hgvsp: ENST00000587260.1:c.456G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.234+84G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.468G>T
  hgvsp: ENST00000360105.4:c.468G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41169
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser153Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

19-13136275-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136275
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136275
    reference: chr 19
allele count: 1
allele frequency: 8.320575118152166e-6
allele num: 120184
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.468C>T
  hgvsp: ENST00000592199.1:c.468C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*299C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465094
  ensembl transcript: ENST00000591028
  gene symbol: NFIX
  hgvsc: ENST00000591028.1:c.516C>T
  hgvsp: ENST00000591028.1:c.516C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.477C>T
  hgvsp: ENST00000360105.4:c.477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.327C>T
  hgvsp: ENST00000588228.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.465C>T
  hgvsp: ENST00000358552.3:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.444C>T
  hgvsp: ENST00000587760.1:c.444C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.444C>T
  hgvsp: ENST00000585575.1:c.444C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468707
  ensembl transcript: ENST00000586873
  gene symbol: NFIX
  hgvsc: ENST00000586873.1:c.327C>T
  hgvsp: ENST00000586873.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000465616
  ensembl transcript: ENST00000590027
  gene symbol: NFIX
  hgvsc: ENST00000590027.1:c.327C>T
  hgvsp: ENST00000590027.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.465C>T
  hgvsp: ENST00000587260.1:c.465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.468C>T
  hgvsp: ENST00000397661.2:c.468C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.234+93C>T
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: synonymous
filter: VQSRTrancheINDEL99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3427
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys156Cys
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/19-13136363-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136363
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136363
    reference: chr 19
allele count: 1
allele frequency: 8.481332586976066e-6
allele num: 117906
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.553C>A
  hgvsp: ENSP00000351354.3:p.Pro185Thr
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.556C>A
  hgvsp: ENSP00000380781.2:p.Pro186Thr
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.532C>A
  hgvsp: ENSP00000468794.1:p.Pro178Thr
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.532C>A
  hgvsp: ENSP00000466389.1:p.Pro178Thr
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.556C>A
  hgvsp: ENSP00000467512.1:p.Pro186Thr
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.553C>A
  hgvsp: ENSP00000467785.1:p.Pro185Thr
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.415C>A
  hgvsp: ENSP00000466735.1:p.Pro139Thr
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*387C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.565C>A
  hgvsp: ENSP00000353219.4:p.Pro189Thr
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.234+181C>A
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13697
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro186Thr
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP

19-13136373-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136373
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136373
    reference: chr 19
allele count: 1
allele frequency: 8.548031388371259e-6
allele num: 116986
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.535+7C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.234+191C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.418+7C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.556+7C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.535+7C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.556+7C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.559+7C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.568+7C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*390+7C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.559+7C>T
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37648
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12929
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
hgvs: c.559+7C>T
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

19-13136384-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136384
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136384
    reference: chr 19
allele count: 1
allele frequency: 8.634385577122331e-6
allele num: 115816
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.535+18A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.418+18A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.568+18A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.559+18A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.559+18A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.535+18A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.556+18A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*390+18A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.556+18A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.234+202A>G
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36035
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12076
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4937
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

19-13136384-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136384
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136383
    reference: chr 19
allele count: 1
allele frequency: 8.634385577122331e-6
allele num: 115816
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.234+207delT
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.535+23delT
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*390+23delT
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.568+23delT
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.556+23delT
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.559+23delT
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.418+23delT
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.556+23delT
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.559+23delT
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.535+23delT
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36035
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4937
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12076
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4761
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: AT
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

19-13136386-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136386
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136386
    reference: chr 19
allele count: 1
allele frequency: 8.662058451570432e-6
allele num: 115446
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.568+20T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*390+20T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.559+20T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.234+204T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.556+20T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.559+20T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.535+20T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.418+20T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.535+20T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.556+20T>A
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5322
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35525
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

19-13136386-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136386
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136386
    reference: chr 19
allele count: 1
allele frequency: 8.662058451570432e-6
allele num: 115446
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.535+20T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.234+204T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.559+20T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.556+20T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.568+20T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.556+20T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*390+20T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.535+20T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.418+20T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.559+20T>C
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35525
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5322
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS

19-13136389-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136389
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136389
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 115104
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.556+23T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.418+23T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.535+23T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.568+23T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*390+23T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.234+207T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.556+23T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.535+23T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.559+23T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.559+23T>C
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2079
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34530
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11391
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

19-13136394-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136394
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136394
    reference: chr 19
allele count: 1
allele frequency: 8.729355075247041e-6
allele num: 114556
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.556+28C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.556+28C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.535+28C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.559+28C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.234+212C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.535+28C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.418+28C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*390+28C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.559+28C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.568+28C>T
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7006
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32909
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10781
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1923
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD

19-13136396-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136396
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136396
    reference: chr 19
allele count: 2
allele frequency: 1.750363200364075e-5
allele num: 114262
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*390+30C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.535+30C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.234+214C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.535+30C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.559+30C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.568+30C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.556+30C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.418+30C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.556+30C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.559+30C>T
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10467
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32079
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5648
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

19-13136410-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136410
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136410
    reference: chr 19
allele count: 1
allele frequency: 8.976660682226211e-6
allele num: 111400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*390+44T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.556+44T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.559+44T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.234+228T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.535+44T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.559+44T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.568+44T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.556+44T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.418+44T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.535+44T>C
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11095
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7131
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27443
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5634
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4862
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

19-13136415-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136415
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136415
    reference: chr 19
allele count: 1
allele frequency: 9.041918333393613e-6
allele num: 110596
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.535+49G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.234+233G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.568+49G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.559+49G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.556+49G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.556+49G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*390+49G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.535+49G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.418+49G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.559+49G>A
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3707
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10983
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26497
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8414
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1542
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

19-13136415-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13136415
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13136415
    reference: chr 19
allele count: 1
allele frequency: 9.041918333393613e-6
allele num: 110596
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.535+49G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.535+49G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.418+49G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.559+49G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*390+49G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.234+233G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.556+49G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.556+49G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.568+49G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.559+49G>T
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8414
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3707
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26497
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10983
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4983
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

19-13183819-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183819
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183819
    reference: chr 19
allele count: 2
allele frequency: 1.66245511371193e-5
allele num: 120304
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*391-42A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.419-42A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.536-42A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.569-42A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.560-42A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.235-42A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.560-42A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.536-42A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.557-42A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.68-42A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.557-42A>G
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5749
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5144
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7985
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4358
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

19-13183825-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183825
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183825
    reference: chr 19
allele count: 1
allele frequency: 8.311861025683651e-6
allele num: 120310
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.68-36C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.419-36C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.560-36C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.557-36C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.536-36C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.235-36C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.557-36C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*391-36C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.536-36C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.569-36C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.560-36C>G
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5749
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5586
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7985
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4358
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1169
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

19-13183836-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183836
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183836
    reference: chr 19
allele count: 2
allele frequency: 1.66198540776812e-5
allele num: 120338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.235-25T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.536-25T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.560-25T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.419-25T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.560-25T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.557-25T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.536-25T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*391-25T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.557-25T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.68-25T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.569-25T>A
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5750
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7986
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4358
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS

19-13183837-TCTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183837
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183834
    reference: chr 19
allele count: 2
allele frequency: 1.661847309469206e-5
allele num: 120348
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.536-22_536-20delTCC
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.557-22_557-20delTCC
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.560-22_560-20delTCC
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.536-22_536-20delTCC
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.235-22_235-20delTCC
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.557-22_557-20delTCC
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*391-22_*391-20delTCC
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.560-22_560-20delTCC
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.419-22_419-20delTCC
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.68-22_68-20delTCC
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.569-22_569-20delTCC
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4358
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5749
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7986
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3479
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: TCTC
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

19-13183844-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183844
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183844
    reference: chr 19
allele count: 1
allele frequency: 8.306475728477921e-6
allele num: 120388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.235-17T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.560-17T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.569-17T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.536-17T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.557-17T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.68-17T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*391-17T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.560-17T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.536-17T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.419-17T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.557-17T>C
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5749
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3479
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4359
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7986
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

19-13183848-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183848
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183848
    reference: chr 19
allele count: 24
allele frequency: 1.993554174834701e-4
allele num: 120388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.68-13G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.560-13G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.235-13G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.569-13G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.536-13G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.557-13G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*391-13G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.536-13G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.560-13G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.557-13G>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.419-13G>T
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8000
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4353
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5747
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

19-13183865-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183865
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183865
    reference: chr 19
allele count: 19
allele frequency: 1.576946699201567e-4
allele num: 120486
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.561C>T
  hgvsp: ENST00000587260.1:c.561C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.540C>T
  hgvsp: ENST00000587760.1:c.540C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.239C>T
  hgvsp: ENSP00000466605.1:p.Pro80Leu
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.423C>T
  hgvsp: ENST00000588228.1:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.564C>T
  hgvsp: ENST00000592199.1:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.573C>T
  hgvsp: ENST00000360105.4:c.573C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.564C>T
  hgvsp: ENST00000397661.2:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*395C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.540C>T
  hgvsp: ENST00000585575.1:c.540C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.561C>T
  hgvsp: ENST00000358552.3:c.561C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.72C>T
  variant of: http://identifiers.org/hgnc/7788
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4353
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5747
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5581
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2097
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5108
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro80Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ

19-13183872-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183872
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183872
    reference: chr 19
allele count: 1
allele frequency: 8.295037908323241e-6
allele num: 120554
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*402T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.580T>C
  hgvsp: ENSP00000353219.4:p.Ser194Pro
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.547T>C
  hgvsp: ENSP00000468794.1:p.Ser183Pro
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.246T>C
  hgvsp: ENST00000585382.1:c.246T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.547T>C
  hgvsp: ENSP00000466389.1:p.Ser183Pro
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.571T>C
  hgvsp: ENSP00000380781.2:p.Ser191Pro
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.571T>C
  hgvsp: ENSP00000467512.1:p.Ser191Pro
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.430T>C
  hgvsp: ENSP00000466735.1:p.Ser144Pro
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.568T>C
  hgvsp: ENSP00000467785.1:p.Ser190Pro
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.79T>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.568T>C
  hgvsp: ENSP00000351354.3:p.Ser190Pro
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4354
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7990
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser191Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD

19-13183877-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183877
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183877
    reference: chr 19
allele count: 2
allele frequency: 1.658622348277521e-5
allele num: 120582
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.576T>G
  hgvsp: ENSP00000380781.2:p.Asp192Glu
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.435T>G
  hgvsp: ENSP00000466735.1:p.Asp145Glu
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.573T>G
  hgvsp: ENSP00000467785.1:p.Asp191Glu
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*407T>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.573T>G
  hgvsp: ENSP00000351354.3:p.Asp191Glu
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.576T>G
  hgvsp: ENSP00000467512.1:p.Asp192Glu
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.84T>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.585T>G
  hgvsp: ENSP00000353219.4:p.Asp195Glu
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.552T>G
  hgvsp: ENSP00000466389.1:p.Asp184Glu
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.552T>G
  hgvsp: ENSP00000468794.1:p.Asp184Glu
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.251T>G
  hgvsp: ENSP00000466605.1:p.Ile84Arg
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5747
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7990
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4354
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp192Glu
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

19-13183900-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183900
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183900
    reference: chr 19
allele count: 1
allele frequency: 8.287201246395068e-6
allele num: 120668
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.458C>T
  hgvsp: ENSP00000466735.1:p.Ala153Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.107C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.596C>T
  hgvsp: ENSP00000351354.3:p.Ala199Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*430C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.599C>T
  hgvsp: ENSP00000380781.2:p.Ala200Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.599C>T
  hgvsp: ENSP00000467512.1:p.Ala200Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.575C>T
  hgvsp: ENSP00000468794.1:p.Ala192Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.608C>T
  hgvsp: ENSP00000353219.4:p.Ala203Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.274C>T
  hgvsp: ENSP00000466605.1:p.Arg92Trp
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.596C>T
  hgvsp: ENSP00000467785.1:p.Ala199Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.575C>T
  hgvsp: ENSP00000466389.1:p.Ala192Val
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7989
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4354
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala200Val
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

19-13183901-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183901
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183901
    reference: chr 19
allele count: 6
allele frequency: 4.972155926809865e-5
allele num: 120672
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.609G>A
  hgvsp: ENST00000360105.4:c.609G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.597G>A
  hgvsp: ENST00000587260.1:c.597G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.600G>A
  hgvsp: ENST00000592199.1:c.600G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.275G>A
  hgvsp: ENSP00000466605.1:p.Arg92Gln
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.600G>A
  hgvsp: ENST00000397661.2:c.600G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.576G>A
  hgvsp: ENST00000587760.1:c.576G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.108G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.459G>A
  hgvsp: ENST00000588228.1:c.459G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*431G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.576G>A
  hgvsp: ENST00000585575.1:c.576G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.597G>A
  hgvsp: ENST00000358552.3:c.597G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7993
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2645
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg92Gln
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-13183905-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183905
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183905
    reference: chr 19
allele count: 6
allele frequency: 4.971908715755978e-5
allele num: 120678
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.463A>G
  hgvsp: ENSP00000466735.1:p.Ile155Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.601A>G
  hgvsp: ENSP00000467785.1:p.Ile201Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.112A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.580A>G
  hgvsp: ENSP00000468794.1:p.Ile194Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.604A>G
  hgvsp: ENSP00000467512.1:p.Ile202Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*435A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.613A>G
  hgvsp: ENSP00000353219.4:p.Ile205Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.279A>G
  hgvsp: ENST00000585382.1:c.279A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.601A>G
  hgvsp: ENSP00000351354.3:p.Ile201Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.604A>G
  hgvsp: ENSP00000380781.2:p.Ile202Val
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.580A>G
  hgvsp: ENSP00000466389.1:p.Ile194Val
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4353
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3479
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7995
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5584
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile202Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP

19-13183908-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183908
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183908
    reference: chr 19
allele count: 1
allele frequency: 8.285827919925758e-6
allele num: 120688
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.607A>G
  hgvsp: ENSP00000467512.1:p.Lys203Glu
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.583A>G
  hgvsp: ENSP00000468794.1:p.Lys195Glu
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.466A>G
  hgvsp: ENSP00000466735.1:p.Lys156Glu
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.583A>G
  hgvsp: ENSP00000466389.1:p.Lys195Glu
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*438A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.282A>G
  hgvsp: ENST00000585382.1:c.282A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.604A>G
  hgvsp: ENSP00000467785.1:p.Lys202Glu
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.616A>G
  hgvsp: ENSP00000353219.4:p.Lys206Glu
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.604A>G
  hgvsp: ENSP00000351354.3:p.Lys202Glu
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.115A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.607A>G
  hgvsp: ENSP00000380781.2:p.Lys203Glu
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7992
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3695
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3479
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys203Glu
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

19-13183909-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183909
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183909
    reference: chr 19
allele count: 1
allele frequency: 8.285827919925758e-6
allele num: 120688
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.617A>G
  hgvsp: ENSP00000353219.4:p.Lys206Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*439A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.584A>G
  hgvsp: ENSP00000468794.1:p.Lys195Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.467A>G
  hgvsp: ENSP00000466735.1:p.Lys156Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.584A>G
  hgvsp: ENSP00000466389.1:p.Lys195Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.116A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.605A>G
  hgvsp: ENSP00000351354.3:p.Lys202Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.605A>G
  hgvsp: ENSP00000467785.1:p.Lys202Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.283A>G
  hgvsp: ENSP00000466605.1:p.Asn95Asp
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.608A>G
  hgvsp: ENSP00000467512.1:p.Lys203Arg
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.608A>G
  hgvsp: ENSP00000380781.2:p.Lys203Arg
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3695
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7991
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3479
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys203Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

19-13183922-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183922
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183922
    reference: chr 19
allele count: 4
allele frequency: 3.314166404295159e-5
allele num: 120694
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.618C>T
  hgvsp: ENST00000587260.1:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.296C>T
  hgvsp: ENSP00000466605.1:p.Thr99Met
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.621C>T
  hgvsp: ENST00000397661.2:c.621C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.597C>T
  hgvsp: ENST00000587760.1:c.597C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.480C>T
  hgvsp: ENST00000588228.1:c.480C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.597C>T
  hgvsp: ENST00000585575.1:c.597C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.129C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.630C>T
  hgvsp: ENST00000360105.4:c.630C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.618C>T
  hgvsp: ENST00000358552.3:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.621C>T
  hgvsp: ENST00000592199.1:c.621C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*452C>T
  variant of: http://identifiers.org/hgnc/7788
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7994
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3696
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4430
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2112
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr99Met
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

19-13183927-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183927
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183927
    reference: chr 19
allele count: 2
allele frequency: 1.657028285472833e-5
allele num: 120698
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.598+4A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.622+4A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.631+4A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.619+4A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.130+4A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.481+4A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.297+4A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*453+4A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.598+4A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.619+4A>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.622+4A>G
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5586
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2112
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7993
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3695
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.622+4A>G
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

19-13183931-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183931
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183931
    reference: chr 19
allele count: 1
allele frequency: 8.285553309249991e-6
allele num: 120692
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.297+8C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.622+8C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.619+8C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.481+8C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*453+8C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.130+8C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.598+8C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.622+8C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.598+8C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.619+8C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.631+8C>G
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7994
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3695
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.622+8C>G
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

19-13183931-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183931
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183931
    reference: chr 19
allele count: 1
allele frequency: 8.285553309249991e-6
allele num: 120692
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.297+8C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.622+8C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.631+8C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.481+8C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.619+8C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.619+8C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.622+8C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*453+8C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.598+8C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.130+8C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.598+8C>T
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7994
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3695
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.622+8C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/19-13183932-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183932
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183932
    reference: chr 19
allele count: 1
allele frequency: 8.285690612312537e-6
allele num: 120690
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.130+9C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.297+9C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.598+9C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.619+9C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.481+9C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.631+9C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.622+9C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*453+9C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.619+9C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.622+9C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.598+9C>A
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7994
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3696
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5747
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2638
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD

19-13183934-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183934
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183934
    reference: chr 19
allele count: 1
allele frequency: 8.285416010737898e-6
allele num: 120694
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.631+11C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*453+11C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.619+11C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.130+11C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.297+11C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.598+11C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.622+11C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.598+11C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.481+11C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.619+11C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.622+11C>T
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5746
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7994
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3696
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2638
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum

http://identifiers.org/exac.variant/19-13183936-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183936
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183936
    reference: chr 19
allele count: 1
allele frequency: 8.285690612312537e-6
allele num: 120690
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.297+13C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.598+13C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.619+13C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.598+13C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.481+13C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.619+13C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.130+13C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.622+13C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.622+13C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*453+13C>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.631+13C>A
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5746
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3696
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7993
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/19-13183937-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183937
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183937
    reference: chr 19
allele count: 2
allele frequency: 1.657110661849998e-5
allele num: 120692
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.481+14A>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.297+14A>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.130+14A>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*453+14A>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.598+14A>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.622+14A>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.631+14A>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.598+14A>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.619+14A>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.619+14A>C
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.622+14A>C
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5585
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7994
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3697
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5745
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

19-13183943-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183943
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183943
    reference: chr 19
allele count: 1
allele frequency: 8.285553309249991e-6
allele num: 120692
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.598+20C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*453+20C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.631+20C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.619+20C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.297+20C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.598+20C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.130+20C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.622+20C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.481+20C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.619+20C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.622+20C>T
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7993
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3696
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5745
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5584
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2284
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

19-13183949-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183949
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183949
    reference: chr 19
allele count: 135
allele frequency: 1.118790711550893e-3
allele num: 120666
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.619+26G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.622+26G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.130+26G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.481+26G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.297+26G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.619+26G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.622+26G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*453+26G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.598+26G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.598+26G>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.631+26G>A
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4424
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5137
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2425
  bin: 9.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2062
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5093
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4351
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3690
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3474
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8055
  bin: 9.75e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5731
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5573
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 8.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 2
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-13183951-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183951
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183951
    reference: chr 19
allele count: 1
allele frequency: 8.286651861182008e-6
allele num: 120676
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.481+28C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.622+28C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.598+28C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.297+28C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.598+28C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*453+28C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.631+28C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.622+28C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.619+28C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.619+28C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.130+28C>T
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5742
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7997
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4430
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

19-13183952-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183952
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183952
    reference: chr 19
allele count: 1
allele frequency: 8.286514526259965e-6
allele num: 120678
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*453+29C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.619+29C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.622+29C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.598+29C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.297+29C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.598+29C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.631+29C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.130+29C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.619+29C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.481+29C>G
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.622+29C>G
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5102
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5743
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7997
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4430
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD

19-13183956-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183956
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183956
    reference: chr 19
allele count: 1
allele frequency: 8.288025460814215e-6
allele num: 120656
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.631+33T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.622+33T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.598+33T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.619+33T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*453+33T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.598+33T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.130+33T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.481+33T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.297+33T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.619+33T>A
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.622+33T>A
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5743
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3467
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7997
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5099
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4430
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5591
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

19-13183970-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13183970
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13183970
    reference: chr 19
allele count: 1
allele frequency: 8.292011476143882e-6
allele num: 120598
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466389
  ensembl transcript: ENST00000587760
  gene symbol: NFIX
  hgvsc: ENST00000587760.1:c.598+47C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466605
  ensembl transcript: ENST00000585382
  gene symbol: NFIX
  hgvsc: ENST00000585382.1:c.297+47C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl transcript: ENST00000588680
  gene symbol: NFIX
  hgvsc: ENST00000588680.1:n.130+47C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467785
  ensembl transcript: ENST00000587260
  gene symbol: NFIX
  hgvsc: ENST00000587260.1:c.619+47C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467512
  ensembl transcript: ENST00000592199
  gene symbol: NFIX
  hgvsc: ENST00000592199.1:c.622+47C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000468794
  ensembl transcript: ENST00000585575
  gene symbol: NFIX
  hgvsc: ENST00000585575.1:c.598+47C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000380781
  ensembl transcript: ENST00000397661
  gene symbol: NFIX
  hgvsc: ENST00000397661.2:c.622+47C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000467536
  ensembl transcript: ENST00000586797
  gene symbol: NFIX
  hgvsc: ENST00000586797.1:c.*453+47C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000353219
  ensembl transcript: ENST00000360105
  gene symbol: NFIX
  hgvsc: ENST00000360105.4:c.631+47C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000466735
  ensembl transcript: ENST00000588228
  gene symbol: NFIX
  hgvsc: ENST00000588228.1:c.481+47C>T
  variant of: http://identifiers.org/hgnc/7788
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008441
  ensembl protein: ENSP00000351354
  ensembl transcript: ENST00000358552
  gene symbol: NFIX
  hgvsc: ENST00000358552.3:c.619+47C>T
  variant of: http://identifiers.org/hgnc/7788
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4351
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5741
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7996
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4422
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5099
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

GenotypeDepth
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 33
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 105
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1159
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 181
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50667
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5592
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1360
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504528631179851e-5
allele num: 66466
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.792e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.24e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.412859e6

MQRankSum
type: SiteQuality
SIO_000300: -5.33e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.719e0

QD
type: SiteQuality
SIO_000300: 2.448e1

GenotypeDepth
all individuals: 200
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1359
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1159
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5604
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50697
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504936190705514e-5
allele num: 66448
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.24e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.229e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.568e0

DP
type: SiteQuality
SIO_000300: 1.412631e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.17e-1

FS
type: SiteQuality
SIO_000300: 1.203e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

QD
type: SiteQuality
SIO_000300: 6.7e-1

MQ
type: SiteQuality
SIO_000300: 5.904e1

GenotypeDepth
all individuals: 337
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 206
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3163
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1361
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5625
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50806
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1163
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 9.75e1
variant carriers: 5

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.793742757821553e-4
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.989e1

MQRankSum
type: SiteQuality
SIO_000300: 1.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.860000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

FS
type: SiteQuality
SIO_000300: 5.928e0

QD
type: SiteQuality
SIO_000300: 1.322e1

DP
type: SiteQuality
SIO_000300: 1.412579e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-1

GenotypeDepth
all individuals: 99
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 43117
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 335
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5626
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50695
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1156
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1368
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66458
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.84e-1

DP
type: SiteQuality
SIO_000300: 1.41214e6

QD
type: SiteQuality
SIO_000300: 1.453e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.36e0

MQRankSum
type: SiteQuality
SIO_000300: 2.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.693e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

GenotypeDepth
all individuals: 183
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 43071
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50759
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1360
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5619
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1158
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.716284492809949e-5
allele num: 10292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.974e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.66e0

FS
type: SiteQuality
SIO_000300: 6.678e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.1e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.315e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 9.01e0

DP
type: SiteQuality
SIO_000300: 1.411847e6

GenotypeDepth
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 338
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 8
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1361
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5629
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 364
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50611
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1162
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.319647413593134e-4
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.664e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.55e-1

FS
type: SiteQuality
SIO_000300: 6.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.34e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.3e-1

QD
type: SiteQuality
SIO_000300: 8.470000000000001e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.411001e6

GenotypeDepth
all individuals: 225
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50597
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5623
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1157
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1355
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66424
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.246e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 7.86e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.35e-1

QD
type: SiteQuality
SIO_000300: 1.337e1

DP
type: SiteQuality
SIO_000300: 1.410991e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.06e-1

FS
type: SiteQuality
SIO_000300: 5.712e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

GenotypeDepth
all individuals: 9
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 336
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3161
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 13272
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 1154
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1354
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 508
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50598
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5633
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.505479947007106e-4
allele num: 66424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.399999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.64e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

MQRankSum
type: SiteQuality
SIO_000300: -2.26e-1

FS
type: SiteQuality
SIO_000300: 1.119e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.364e0

DP
type: SiteQuality
SIO_000300: 1.410956e6

QD
type: SiteQuality
SIO_000300: 1.1e1

GenotypeDepth
all individuals: 340
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 251
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 98
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 42836
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3177
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1152
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5628
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50381
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1364
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 133
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.786651008025054e-5
allele num: 10218
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66410
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729505361466621e-4
allele num: 11564
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.47e-1

DP
type: SiteQuality
SIO_000300: 1.410166e6

FS
type: SiteQuality
SIO_000300: 2.794e0

VQSLOD
type: SiteQuality
SIO_000300: 2.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.16e-1

QD
type: SiteQuality
SIO_000300: 1.286e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.15e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

GenotypeDepth
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3186
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13297
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 437
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5629
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1360
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1147
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 101
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50454
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505797319680771e-5
allele num: 66410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.410605e6

QD
type: SiteQuality
SIO_000300: 6.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.922e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.528e0

MQRankSum
type: SiteQuality
SIO_000300: -8.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.942e1

VQSLOD
type: SiteQuality
SIO_000300: -1.93e0

FS
type: SiteQuality
SIO_000300: 1.0546e1

GenotypeDepth
all individuals: 300
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3205
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 339
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1356
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 547
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1146
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5644
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50341
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10150
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.013409673045051e-5
allele num: 66370
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.304e1

FS
type: SiteQuality
SIO_000300: 2.119e0

DP
type: SiteQuality
SIO_000300: 1.409247e6

MQRankSum
type: SiteQuality
SIO_000300: 6.51e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.43e-1

GenotypeDepth
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50248
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1363
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1155
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5643
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.2931e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

VQSLOD
type: SiteQuality
SIO_000300: -2.537e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.26e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.3e0

DP
type: SiteQuality
SIO_000300: 1.408206e6

MQRankSum
type: SiteQuality
SIO_000300: -7.43e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

QD
type: SiteQuality
SIO_000300: 1.363e1

GenotypeDepth
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 290
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1365
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50267
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 588
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1155
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 131
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5642
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10128
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66358
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

DP
type: SiteQuality
SIO_000300: 1.408206e6

MQ
type: SiteQuality
SIO_000300: 5.985e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.509e0

MQRankSum
type: SiteQuality
SIO_000300: -2.186e0

VQSLOD
type: SiteQuality
SIO_000300: -1.101e0

QD
type: SiteQuality
SIO_000300: 1.371e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.34e-1

GenotypeDepth
all individuals: 2
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 344
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1155
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50184
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5640
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1366
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.94e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.389999999999999e-1

FS
type: SiteQuality
SIO_000300: 2.271e0

MQRankSum
type: SiteQuality
SIO_000300: 1.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

DP
type: SiteQuality
SIO_000300: 1.408231e6

QD
type: SiteQuality
SIO_000300: 1.32e1

VQSLOD
type: SiteQuality
SIO_000300: 6.15e-1

GenotypeDepth
all individuals: 38
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3201
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5631
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50131
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1369
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1160
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 131
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 615
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10098
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.95e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 7.3e-1

DP
type: SiteQuality
SIO_000300: 1.408151e6

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

VQSLOD
type: SiteQuality
SIO_000300: 5.639999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.308e1

GenotypeDepth
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3201
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 615
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50131
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1160
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1369
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5631
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10098
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507113576079093e-5
allele num: 66352
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.95e1

QD
type: SiteQuality
SIO_000300: 1.308e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.88e-1

DP
type: SiteQuality
SIO_000300: 1.408151e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

VQSLOD
type: SiteQuality
SIO_000300: 5.639999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

FS
type: SiteQuality
SIO_000300: 7.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

GenotypeDepth
all individuals: 3199
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 7.75e1
variant carriers: 2

GenotypeDepth
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5629
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1366
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1159
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50038
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10088
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.521613311629589e-5
allele num: 66348
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-3

DP
type: SiteQuality
SIO_000300: 1.408004e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.6e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.59e0

QD
type: SiteQuality
SIO_000300: 1.483e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.58e-1

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 251
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3237
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1363
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50066
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5645
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 748
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1158
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10008
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66296
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.39e0

QD
type: SiteQuality
SIO_000300: 1.249e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.24e-1

DP
type: SiteQuality
SIO_000300: 1.407557e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.28e0

GenotypeDepth
all individuals: 13320
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 42010
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3278
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 10
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5648
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 935
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1169
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49834
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1385
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.477857639693948e-4
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.530079729403237e-5
allele num: 66224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.234e0

DP
type: SiteQuality
SIO_000300: 1.404551e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: -4.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.185e0

QD
type: SiteQuality
SIO_000300: 1.109e1

GenotypeDepth
all individuals: 13266
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 41042
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 455
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 177
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1381
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5550
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49025
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1191
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 966
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9568
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65786
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.600000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

QD
type: SiteQuality
SIO_000300: 1.159e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.678e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

DP
type: SiteQuality
SIO_000300: 1.409536e6

MQ
type: SiteQuality
SIO_000300: 5.915e1

GenotypeDepth
all individuals: 432
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 97
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 85
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 13
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5550
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1191
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 966
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49025
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1381
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.651162790697675e-4
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65786
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

FS
type: SiteQuality
SIO_000300: 5.600000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.03e-1

MQ
type: SiteQuality
SIO_000300: 5.915e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

QD
type: SiteQuality
SIO_000300: 1.159e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.678e0

DP
type: SiteQuality
SIO_000300: 1.409536e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

GenotypeDepth
all individuals: 3368
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5570
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1382
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49143
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 997
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1196
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518141794443601e-5
allele num: 65870
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.14e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.78e-1

FS
type: SiteQuality
SIO_000300: 1.5435e1

DP
type: SiteQuality
SIO_000300: 1.409751e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.103e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -9.25e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

GenotypeDepth
all individuals: 8
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 183
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 100
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5599
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49617
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1394
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51308821304282e-5
allele num: 66090
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.596e0

VQSLOD
type: SiteQuality
SIO_000300: 7.18e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

MQRankSum
type: SiteQuality
SIO_000300: -3.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.431e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.71e-1

QD
type: SiteQuality
SIO_000300: 1.342e1

DP
type: SiteQuality
SIO_000300: 1.418684e6

GenotypeDepth
all individuals: 7
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 364
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3396
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 100
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 178
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1190
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49775
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5611
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1390
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9660
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.57e-1

FS
type: SiteQuality
SIO_000300: 8.3e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

QD
type: SiteQuality
SIO_000300: 8.380000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.488e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.74e-1

DP
type: SiteQuality
SIO_000300: 1.421346e6

VQSLOD
type: SiteQuality
SIO_000300: -1.381e-1

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 102
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 41310
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 126
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1370
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49769
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5598
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1180
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9702
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508250128201261e-5
allele num: 66302
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

FS
type: SiteQuality
SIO_000300: 1.159e0

MQRankSum
type: SiteQuality
SIO_000300: -2.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.004e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.42e0

QD
type: SiteQuality
SIO_000300: 1.797e1

VQSLOD
type: SiteQuality
SIO_000300: -8.269e-1

DP
type: SiteQuality
SIO_000300: 1.423426e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
all individuals: 16
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 453
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 186
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3422
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13892
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49650
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1362
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5577
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1163
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 502
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 117
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.164144353899884e-4
allele num: 8590
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.424083e6

MQRankSum
type: SiteQuality
SIO_000300: -5.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.033e0

QD
type: SiteQuality
SIO_000300: 1.467e1

GenotypeDepth
all individuals: 41014
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1168
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49314
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1360
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5563
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507431637975218e-5
allele num: 66338
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.278e1

MQ
type: SiteQuality
SIO_000300: 5.934e1

QD
type: SiteQuality
SIO_000300: 3.5e-1

FS
type: SiteQuality
SIO_000300: 1.09617e2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.229e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.172e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.24e-1

DP
type: SiteQuality
SIO_000300: 1.423608e6

GenotypeQuality
all individuals: 1254
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5176
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47193
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2612
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1084
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9274
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535107918086642e-5
allele num: 65142
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16080
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.54e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.206e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e-1

MQ
type: SiteQuality
SIO_000300: 5.734e1

QD
type: SiteQuality
SIO_000300: 8.33e0

FS
type: SiteQuality
SIO_000300: 6.592e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.445e0

DP
type: SiteQuality
SIO_000300: 1.387015e6

GenotypeQuality
all individuals: 43
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3632
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45253
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 774
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1203
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1049
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4973
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9146
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.545451735542299e-5
allele num: 64706
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.18e0

QD
type: SiteQuality
SIO_000300: 4.42e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.019e0

VQSLOD
type: SiteQuality
SIO_000300: -2.404e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQ
type: SiteQuality
SIO_000300: 5.943e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQRankSum
type: SiteQuality
SIO_000300: 3.01e-1

DP
type: SiteQuality
SIO_000300: 1.359615e6

GenotypeQuality
all individuals: 111
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1233
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4761
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1288
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1127
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 470
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43060
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4623
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.55724430048586e-5
allele num: 64216
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9000
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15370
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.21e0

DP
type: SiteQuality
SIO_000300: 1.32614e6

FS
type: SiteQuality
SIO_000300: 9.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.11e-1

QD
type: SiteQuality
SIO_000300: 1.137e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e-1

GenotypeQuality
all individuals: 634
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1233
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 185
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1288
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43060
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1127
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4623
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.55724430048586e-5
allele num: 64216
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15370
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9000
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.21e0

FS
type: SiteQuality
SIO_000300: 9.88e-1

QD
type: SiteQuality
SIO_000300: 1.137e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

DP
type: SiteQuality
SIO_000300: 1.32614e6

MQRankSum
type: SiteQuality
SIO_000300: 4.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.47e-1

GenotypeQuality
all individuals: 1120
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42368
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1475
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 988
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4899
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4560
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15292
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.56206067043644e-5
allele num: 64018
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8922
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.374e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-2

FS
type: SiteQuality
SIO_000300: 7.576e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.317765e6

VQSLOD
type: SiteQuality
SIO_000300: 2.96e-1

QD
type: SiteQuality
SIO_000300: 9.859999999999999e0

GenotypeQuality
all individuals: 263
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1120
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4899
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 42368
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4560
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1475
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8922
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.56206067043644e-5
allele num: 64018
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15292
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.317765e6

VQSLOD
type: SiteQuality
SIO_000300: 2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.374e0

QD
type: SiteQuality
SIO_000300: 9.859999999999999e0

FS
type: SiteQuality
SIO_000300: 7.576e0

GenotypeQuality
all individuals: 185
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4447
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5206
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40866
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1627
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1904
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1110
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 9.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63852
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8848
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15228
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.324e0

DP
type: SiteQuality
SIO_000300: 1.298488e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

QD
type: SiteQuality
SIO_000300: 5.43e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

GenotypeQuality
all individuals: 1561
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2545
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5549
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 86
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4299
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38891
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1066
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8768
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11332
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.640106241699867e-5
allele num: 15060
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63604
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.207e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.049e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.824e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.81e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.641e0

DP
type: SiteQuality
SIO_000300: 1.276465e6

QD
type: SiteQuality
SIO_000300: 4.48e0

GenotypeQuality
all individuals: 228
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4202
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2069
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37858
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2886
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 940
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 181
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1857
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8354
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.832361773538245e-5
allele num: 11322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14968
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8720
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.575348939790164e-5
allele num: 63478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.851e0

QD
type: SiteQuality
SIO_000300: 1.176e1

MQRankSum
type: SiteQuality
SIO_000300: -8.22e-1

DP
type: SiteQuality
SIO_000300: 1.266387e6

VQSLOD
type: SiteQuality
SIO_000300: 6.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.07e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.182e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

GenotypeQuality
all individuals: 187
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3026
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1257
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 918
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4725
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3727
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 905
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2805
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3022
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1068
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5527
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 182
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19949
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.607613658285641e-5
allele num: 62204
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8262
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13906
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11212
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.02e0

QD
type: SiteQuality
SIO_000300: 1.464e1

MQ
type: SiteQuality
SIO_000300: 5.927e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.722e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.918e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

FS
type: SiteQuality
SIO_000300: 3.168e0

MQRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.199613e6

VQSLOD
type: SiteQuality
SIO_000300: -1.607e-1

GenotypeQuality
all individuals: 146
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4852
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2786
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5666
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 934
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3121
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 747
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5957
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4414
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17706
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4983
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3006
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8222
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.615717701803141e-5
allele num: 61892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11156
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

DP
type: SiteQuality
SIO_000300: 1.204071e6

FS
type: SiteQuality
SIO_000300: 5.909e0

QD
type: SiteQuality
SIO_000300: 1.346e1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.085e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.03e-1

GenotypeQuality
all individuals: 1113
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5957
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4414
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5666
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17706
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3006
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3121
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2786
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1542
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4852
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11156
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13590
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.216249087813184e-4
allele num: 8222
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

FS
type: SiteQuality
SIO_000300: 5.909e0

VQSLOD
type: SiteQuality
SIO_000300: 6.32e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 1.346e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.204071e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.085e0

GenotypeQuality
all individuals: 872
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52533
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 984
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1865
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1166
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503895088278642e-5
allele num: 66494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.030715316429602e-4
allele num: 9702
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

FS
type: SiteQuality
SIO_000300: 3.954e0

DP
type: SiteQuality
SIO_000300: 4.109578e6

VQSLOD
type: SiteQuality
SIO_000300: 9.15e-1

QD
type: SiteQuality
SIO_000300: 1.406e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.3e-1

GenotypeQuality
all individuals: 195
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1949
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 950
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 617
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52533
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 869
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66496
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073858114674441e-5
allele num: 16464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.49e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.6e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.110192e6

QD
type: SiteQuality
SIO_000300: 1.441e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 6.48e-1

FS
type: SiteQuality
SIO_000300: 7.151e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.32e-1

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52534
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 949
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1178
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9710
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.214624073849144e-4
allele num: 16466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66514
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.663e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.09e-1

QD
type: SiteQuality
SIO_000300: 1.58e1

DP
type: SiteQuality
SIO_000300: 4.111361e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.395e0

MQ
type: SiteQuality
SIO_000300: 5.538e1

FS
type: SiteQuality
SIO_000300: 4.51e0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1180
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2073
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52534
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 197
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21447656060238e-4
allele num: 16468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9712
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66520
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.533e1

FS
type: SiteQuality
SIO_000300: 3.181e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.7e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.51e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.133e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

MQ
type: SiteQuality
SIO_000300: 5.581e1

VQSLOD
type: SiteQuality
SIO_000300: 2.1e0

DP
type: SiteQuality
SIO_000300: 4.111495e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

GenotypeQuality
all individuals: 67
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2138
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52534
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 950
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 986
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.071645415907711e-5
allele num: 16470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.64e-1

DP
type: SiteQuality
SIO_000300: 4.112401e6

MQ
type: SiteQuality
SIO_000300: 5.972e1

QD
type: SiteQuality
SIO_000300: 1.547e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.63e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.281e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2172
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52537
bin: 9.75e1
variant carriers: 24

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.005801196308876e-5
allele num: 66538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 22
allele frequency: 3.327283726557774e-3
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

FS
type: SiteQuality
SIO_000300: 1.38e0

QD
type: SiteQuality
SIO_000300: 1.324e1

DP
type: SiteQuality
SIO_000300: 4.113812e6

MQRankSum
type: SiteQuality
SIO_000300: 4.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.148e0

GenotypeDepth
all individuals: 8004
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2261
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 952
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1202
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 872
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52537
bin: 9.75e1
variant carriers: 19

GenotypeQuality
all individuals: 634
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 9
allele frequency: 1.361161524500907e-3
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.501546592990781e-4
allele num: 66598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.78e-1

QD
type: SiteQuality
SIO_000300: 1.32e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.91e-2

DP
type: SiteQuality
SIO_000300: 4.115861e6

VQSLOD
type: SiteQuality
SIO_000300: 2.99e0

FS
type: SiteQuality
SIO_000300: 1.231e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

GenotypeDepth
all individuals: 5107
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 957
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 875
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52534
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1211
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2289
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500780405811022e-5
allele num: 66632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9750
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.14e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.81e-1

FS
type: SiteQuality
SIO_000300: 7.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

DP
type: SiteQuality
SIO_000300: 4.11563e6

MQ
type: SiteQuality
SIO_000300: 5.968e1

VQSLOD
type: SiteQuality
SIO_000300: 1.2e-1

GenotypeDepth
all individuals: 5147
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1217
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2329
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52534
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 876
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9756
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.319647413593134e-4
allele num: 8622
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.168e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

DP
type: SiteQuality
SIO_000300: 4.116179e6

QD
type: SiteQuality
SIO_000300: 1.428e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e0

VQSLOD
type: SiteQuality
SIO_000300: -8.800000000000001e-3

FS
type: SiteQuality
SIO_000300: 1.353e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.179999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.06e0

GenotypeDepth
all individuals: 888
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2387
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1234
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52535
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 960
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.023331968890708e-4
allele num: 9772
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.024e1

FS
type: SiteQuality
SIO_000300: 2.782e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

DP
type: SiteQuality
SIO_000300: 4.117274e6

VQSLOD
type: SiteQuality
SIO_000300: 4.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.126e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

GenotypeDepth
all individuals: 5146
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2377
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1234
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52535
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 881
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 960
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.046663937781416e-4
allele num: 9772
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499250374812594e-5
allele num: 66700
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.03e0

QD
type: SiteQuality
SIO_000300: 1.146e1

DP
type: SiteQuality
SIO_000300: 4.117774e6

MQRankSum
type: SiteQuality
SIO_000300: 5.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.03e-1

FS
type: SiteQuality
SIO_000300: 5.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.88e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.53e-1

GenotypeDepth
all individuals: 2925
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 964
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52535
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1238
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2385
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21197430614471e-4
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9776
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.997001499250375e-5
allele num: 66700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.78e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.887e1

FS
type: SiteQuality
SIO_000300: 1.768e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.53e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.215e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.5e-1

QD
type: SiteQuality
SIO_000300: 1.04e1

DP
type: SiteQuality
SIO_000300: 4.11795e6

GenotypeDepth
all individuals: 2925
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2380
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 964
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52533
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 636
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1239
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9780
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.916e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.9e-2

DP
type: SiteQuality
SIO_000300: 4.117558e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

QD
type: SiteQuality
SIO_000300: 1.11e1

VQSLOD
type: SiteQuality
SIO_000300: 1.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.39e-1

GenotypeDepth
all individuals: 5107
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2378
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 964
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1239
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52534
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9780
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.94e0

MQ
type: SiteQuality
SIO_000300: 5.921e1

VQSLOD
type: SiteQuality
SIO_000300: -1.509e0

FS
type: SiteQuality
SIO_000300: 7.206e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

QD
type: SiteQuality
SIO_000300: 1.347e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.31e0

DP
type: SiteQuality
SIO_000300: 4.117493e6

GenotypeDepth
all individuals: 2417
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2110
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1239
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 884
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2339
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52532
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.319109461966605e-4
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.3e-2

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 2.627e0

QD
type: SiteQuality
SIO_000300: 8.859999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.3e-2

DP
type: SiteQuality
SIO_000300: 4.117648e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

GenotypeDepth
all individuals: 2109
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2416
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2317
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1242
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52532
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.044153720359771e-4
allele num: 9784
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.925e0

MQ
type: SiteQuality
SIO_000300: 5.92e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

DP
type: SiteQuality
SIO_000300: 4.117518e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.43e-1

QD
type: SiteQuality
SIO_000300: 1.166e1

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

GenotypeDepth
all individuals: 5585
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2416
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2295
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1238
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52524
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 885
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.021867974657674e-4
allele num: 9786
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.61e-1

FS
type: SiteQuality
SIO_000300: 6.468e0

MQRankSum
type: SiteQuality
SIO_000300: -4.17e-1

QD
type: SiteQuality
SIO_000300: 8.449999999999999e0

DP
type: SiteQuality
SIO_000300: 4.11725e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -7.559e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.64e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.16e-1

GenotypeDepth
all individuals: 2109
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2926
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1238
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2295
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52524
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 958
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.61e-1

FS
type: SiteQuality
SIO_000300: 6.468e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.64e-1

DP
type: SiteQuality
SIO_000300: 4.11725e6

MQRankSum
type: SiteQuality
SIO_000300: -4.17e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

VQSLOD
type: SiteQuality
SIO_000300: -7.559e-1

QD
type: SiteQuality
SIO_000300: 8.449999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-3

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2275
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52523
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 960
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1238
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.59e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.216e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.4e-2

FS
type: SiteQuality
SIO_000300: 3.145e0

DP
type: SiteQuality
SIO_000300: 4.116861e6

QD
type: SiteQuality
SIO_000300: 9.83e0

GenotypeQuality
all individuals: 87
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52523
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2269
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1237
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 961
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.449999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.638e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.09e-1

MQ
type: SiteQuality
SIO_000300: 5.913e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.614e-1

DP
type: SiteQuality
SIO_000300: 4.116707e6

MQRankSum
type: SiteQuality
SIO_000300: 9.340000000000001e-1

GenotypeQuality
all individuals: 2275
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 960
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52522
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 635
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1237
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.021867974657674e-4
allele num: 9786
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.096e1

MQ
type: SiteQuality
SIO_000300: 5.948e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.125e0

VQSLOD
type: SiteQuality
SIO_000300: 3.9e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.14e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.7e-2

DP
type: SiteQuality
SIO_000300: 4.116659e6

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 960
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1233
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2266
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52518
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 635
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 981
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211680600993578e-4
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.116568e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

MQ
type: SiteQuality
SIO_000300: 5.962e1

VQSLOD
type: SiteQuality
SIO_000300: 3.23e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.0e-3

QD
type: SiteQuality
SIO_000300: 9.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e0

GenotypeQuality
all individuals: 84
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 884
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52515
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1215
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 955
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.99e-1

DP
type: SiteQuality
SIO_000300: 4.115852e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.17e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.0e-2

FS
type: SiteQuality
SIO_000300: 2.646e0

QD
type: SiteQuality
SIO_000300: 1.373e1

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.55e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52510
bin: 9.75e1
variant carriers: 133

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2210
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1197
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 976
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 876
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 115
allele frequency: 1.333797262816052e-2
allele num: 8622
num of homozygotes: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

South Asian
type: Population
allele count: 19
allele frequency: 1.151375590837474e-3
allele num: 16502
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.929e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.33e-2

MQ
type: SiteQuality
SIO_000300: 5.962e1

DP
type: SiteQuality
SIO_000300: 4.119334e6

QD
type: SiteQuality
SIO_000300: 1.151e1

MQRankSum
type: SiteQuality
SIO_000300: 2.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.48e-1

GenotypeQuality
all individuals: 120
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52501
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2169
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1181
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 979
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 881
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e-1

DP
type: SiteQuality
SIO_000300: 4.114275e6

VQSLOD
type: SiteQuality
SIO_000300: 6.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.557e0

QD
type: SiteQuality
SIO_000300: 1.182e1

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2179
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52501
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 878
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 981
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 948
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.852e0

DP
type: SiteQuality
SIO_000300: 4.114197e6

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.18e-1

FS
type: SiteQuality
SIO_000300: 2.211e0

VQSLOD
type: SiteQuality
SIO_000300: 3.64e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.16e-1

QD
type: SiteQuality
SIO_000300: 1.155e1

GenotypeQuality
all individuals: 623
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1150
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2099
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 979
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 945
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52496
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 1.021659174499387e-4
allele num: 9788
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

DP
type: SiteQuality
SIO_000300: 4.112777e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.084e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.48e-1

FS
type: SiteQuality
SIO_000300: 2.416e0

MQRankSum
type: SiteQuality
SIO_000300: -1.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.232e0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 977
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 825
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 964
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52489
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 143
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1445
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 924
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 614
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5008254539997e-5
allele num: 66630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.917e0

QD
type: SiteQuality
SIO_000300: 1.398e1

VQSLOD
type: SiteQuality
SIO_000300: 4.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.21e-1

FS
type: SiteQuality
SIO_000300: 6.189e0

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

DP
type: SiteQuality
SIO_000300: 4.106938e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.48e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1