19-13035700-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035700
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035700
    reference: chr 19
allele count: 7
allele frequency: 5.779201479475578e-5
allele num: 121124
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.1026+18G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.773+18G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.933+18G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1146+18G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.283+18G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.1044G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*280+18G>A
  variant of: http://identifiers.org/hgnc/3592
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17368
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8630
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1835
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD

19-13035701-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035701
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035701
    reference: chr 19
allele count: 2
allele frequency: 1.650900566258894e-5
allele num: 121146
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.1026+17C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1146+17C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.773+17C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.933+17C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.1043C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*280+17C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.283+17C>T
  variant of: http://identifiers.org/hgnc/3592
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17375
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9194
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8631
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2206
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum

19-13035701-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035701
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035700
    reference: chr 19
allele count: 6
allele frequency: 4.952701698776683e-5
allele num: 121146
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*280+16delG
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1146+16delG
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.773+16delG
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.1026+16delG
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.1042delG
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.283+16delG
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.933+16delG
  variant of: http://identifiers.org/hgnc/3592
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9194
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17375
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1832
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: GC
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

19-13035706-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035706
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035706
    reference: chr 19
allele count: 3
allele frequency: 2.475574333245313e-5
allele num: 121184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*280+12C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.1038C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.283+12C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.1026+12C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1146+12C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.773+12C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.933+12C>T
  variant of: http://identifiers.org/hgnc/3592
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29563
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 872
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8648
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44446
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-13035713-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035713
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035713
    reference: chr 19
allele count: 2
allele frequency: 1.650056101907465e-5
allele num: 121208
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.1026+5G>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.1031G>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1146+5G>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.283+5G>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*280+5G>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.773+5G>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.933+5G>T
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29610
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8646
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2209
  bin: 7.25e1
  variant carriers: 0
hgvs: c.1026+5G>T
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP

19-13035713-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035713
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035713
    reference: chr 19
allele count: 8
allele frequency: 6.60022440762986e-5
allele num: 121208
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1146+5G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.1026+5G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*280+5G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.933+5G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.283+5G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.1031G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.773+5G>C
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17501
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29610
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8646
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44537
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
hgvs: c.1026+5G>C
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD

19-13035713-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035713
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035713
    reference: chr 19
allele count: 3
allele frequency: 2.475084152861197e-5
allele num: 121208
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1146+5G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.773+5G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.933+5G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*280+5G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.1031G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.283+5G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.1026+5G>A
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29610
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2209
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1837
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1518
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
hgvs: c.1026+5G>A
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

19-13035714-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035714
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035714
    reference: chr 19
allele count: 2
allele frequency: 1.649838315845047e-5
allele num: 121224
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.773+4C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.933+4C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.1030C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1146+4C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*280+4C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.283+4C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.1026+4C>T
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17502
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8647
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
hgvs: c.1026+4C>T
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD

19-13035722-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035722
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035722
    reference: chr 19
allele count: 2564
allele frequency: 2.114708938851591e-2
allele num: 121246
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.279A>G
  hgvsp: ENSP00000468384.1:p.Gln94Arg
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.1022A>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.769A>G
  hgvsp: ENSP00000467384.1:p.Gln257Arg
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*276A>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.929A>G
  hgvsp: ENSP00000396548.2:p.Gln310Arg
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.1022A>G
  hgvsp: ENSP00000320309.3:p.Gln341Arg
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1142A>G
  hgvsp: ENSP00000468051.1:p.Gln381Arg
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 9.75e1
  variant carriers: 1724
genotype depth: GenotypeDepth
  all individuals: 8808
  bin: 3.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 131
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 29264
  bin: 2.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 119
genotype depth: GenotypeDepth
  all individuals: 17319
  bin: 2.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 3.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 92
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2063
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1617
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln341Arg
num of homozygotes: 38
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

19-13035726-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035726
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035726
    reference: chr 19
allele count: 1
allele frequency: 8.247286642694553e-6
allele num: 121252
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*272G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.1018G>C
  hgvsp: ENSP00000320309.3:p.Ala340Pro
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.275G>C
  hgvsp: ENSP00000468384.1:p.Ala93Pro
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.925G>C
  hgvsp: ENSP00000396548.2:p.Ala309Pro
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1138G>C
  hgvsp: ENSP00000468051.1:p.Ala380Pro
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.765G>C
  hgvsp: ENSP00000467384.1:p.Ala256Pro
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.1018G>C
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30561
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17847
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 45927
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1701
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8830
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala340Pro
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-13035731-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035731
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035731
    reference: chr 19
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*267G>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.760G>T
  hgvsp: ENSP00000467384.1:p.Arg254Leu
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.1013G>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.920G>T
  hgvsp: ENSP00000396548.2:p.Arg307Leu
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.1013G>T
  hgvsp: ENSP00000320309.3:p.Arg338Leu
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.270G>T
  hgvsp: ENSP00000468384.1:p.Arg91Leu
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1133G>T
  hgvsp: ENSP00000468051.1:p.Arg378Leu
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2178
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8834
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg338Leu
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

19-13035732-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035732
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035732
    reference: chr 19
allele count: 33
allele frequency: 2.720662192688839e-4
allele num: 121294
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.759C>T
  hgvsp: ENSP00000467384.1:p.Arg254Cys
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1132C>T
  hgvsp: ENSP00000468051.1:p.Arg378Cys
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.919C>T
  hgvsp: ENSP00000396548.2:p.Arg307Cys
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.269C>T
  hgvsp: ENSP00000468384.1:p.Arg91Cys
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.1012C>T
  hgvsp: ENSP00000320309.3:p.Arg338Cys
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*266C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.1012C>T
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9289
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1699
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8837
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2174
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg338Cys
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

19-13035733-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035733
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035733
    reference: chr 19
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.268C>T
  hgvsp: ENST00000587488.1:c.268C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.918C>T
  hgvsp: ENST00000423140.2:c.918C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*265C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.1011C>T
  hgvsp: ENST00000314606.4:c.1011C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1131C>T
  hgvsp: ENST00000588025.1:c.1131C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.1011C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.758C>T
  hgvsp: ENST00000593021.1:c.758C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9296
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2178
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8847
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Tyr337Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

19-13035733-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035733
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035733
    reference: chr 19
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.918C>A
  hgvsp: ENSP00000396548.2:p.Tyr306Ter
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1131C>A
  hgvsp: ENSP00000468051.1:p.Tyr377Ter
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.268C>A
  hgvsp: ENSP00000468384.1:p.Tyr90Ter
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.1011C>A
  hgvsp: ENSP00000320309.3:p.Tyr337Ter
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.758C>A
  hgvsp: ENSP00000467384.1:p.Tyr253Ter
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.1011C>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*265C>A
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9296
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46065
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2178
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8847
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Tyr337Ter
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-13035739-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035739
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035739
    reference: chr 19
allele count: 3
allele frequency: 2.472962279082036e-5
allele num: 121312
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.1005G>A
  hgvsp: ENST00000314606.4:c.1005G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.752G>A
  hgvsp: ENST00000593021.1:c.752G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.1005G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.912G>A
  hgvsp: ENST00000423140.2:c.912G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*259G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.262G>A
  hgvsp: ENST00000587488.1:c.262G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1125G>A
  hgvsp: ENST00000588025.1:c.1125G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2180
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala335Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

19-13035740-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035740
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035740
    reference: chr 19
allele count: 3
allele frequency: 2.472839974282464e-5
allele num: 121318
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.261C>T
  hgvsp: ENSP00000468384.1:p.Ala88Val
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.1004C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*258C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1124C>T
  hgvsp: ENSP00000468051.1:p.Ala375Val
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.1004C>T
  hgvsp: ENSP00000320309.3:p.Ala335Val
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.911C>T
  hgvsp: ENSP00000396548.2:p.Ala304Val
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.751C>T
  hgvsp: ENSP00000467384.1:p.Ala251Val
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17921
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30619
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8847
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1703
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2179
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala335Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

19-13035743-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035743
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035743
    reference: chr 19
allele count: 2
allele frequency: 1.648451280022419e-5
allele num: 121326
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.1001G>A
  hgvsp: ENSP00000320309.3:p.Arg334His
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.908G>A
  hgvsp: ENSP00000396548.2:p.Arg303His
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*255G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.1001G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.258G>A
  hgvsp: ENSP00000468384.1:p.Arg87His
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1121G>A
  hgvsp: ENSP00000468051.1:p.Arg374His
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.748G>A
  hgvsp: ENSP00000467384.1:p.Arg250His
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17924
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9306
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8848
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2179
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Arg334His
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

19-13035748-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035748
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035748
    reference: chr 19
allele count: 4
allele frequency: 3.296467834715103e-5
allele num: 121342
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.743C>T
  hgvsp: ENST00000593021.1:c.743C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1116C>T
  hgvsp: ENST00000588025.1:c.1116C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.903C>T
  hgvsp: ENST00000423140.2:c.903C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.996C>T
  hgvsp: ENST00000314606.4:c.996C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.253C>T
  hgvsp: ENST00000587488.1:c.253C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.996C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*250C>T
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17929
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30635
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1698
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2181
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser332Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

19-13035761-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035761
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035761
    reference: chr 19
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.240C>T
  hgvsp: ENSP00000468384.1:p.Thr81Ile
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.983C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.890C>T
  hgvsp: ENSP00000396548.2:p.Thr297Ile
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.983C>T
  hgvsp: ENSP00000320309.3:p.Thr328Ile
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.730C>T
  hgvsp: ENSP00000467384.1:p.Thr244Ile
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1103C>T
  hgvsp: ENSP00000468051.1:p.Thr368Ile
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*237C>T
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17939
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30647
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 46160
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8848
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr328Ile
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

19-13035773-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035773
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035773
    reference: chr 19
allele count: 1
allele frequency: 8.241169586787756e-6
allele num: 121342
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1091T>C
  hgvsp: ENSP00000468051.1:p.Leu364Pro
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.228T>C
  hgvsp: ENSP00000468384.1:p.Leu77Pro
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.718T>C
  hgvsp: ENSP00000467384.1:p.Leu240Pro
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.971T>C
  hgvsp: ENSP00000320309.3:p.Leu324Pro
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.878T>C
  hgvsp: ENSP00000396548.2:p.Leu293Pro
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*225T>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.971T>C
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17926
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30655
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9309
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8842
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu324Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

19-13035775-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035775
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035775
    reference: chr 19
allele count: 16
allele frequency: 1.318652337311268e-4
allele num: 121336
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.969A>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.969A>C
  hgvsp: ENST00000314606.4:c.969A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.716A>C
  hgvsp: ENST00000593021.1:c.716A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.226A>C
  hgvsp: ENST00000587488.1:c.226A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1089A>C
  hgvsp: ENST00000588025.1:c.1089A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.876A>C
  hgvsp: ENST00000423140.2:c.876A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*223A>C
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30645
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 17915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9310
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1703
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2182
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46142
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu323Leu
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ

19-13035782-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035782
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035782
    reference: chr 19
allele count: 1
allele frequency: 8.243207596940122e-6
allele num: 121312
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.962A>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1082A>G
  hgvsp: ENSP00000468051.1:p.Lys361Arg
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.962A>G
  hgvsp: ENSP00000320309.3:p.Lys321Arg
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.709A>G
  hgvsp: ENSP00000467384.1:p.Lys237Arg
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.219A>G
  hgvsp: ENSP00000468384.1:p.Lys74Arg
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.869A>G
  hgvsp: ENSP00000396548.2:p.Lys290Arg
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*216A>G
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17885
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1700
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Lys321Arg
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

19-13035786-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035786
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035786
    reference: chr 19
allele count: 3
allele frequency: 2.473084595980413e-5
allele num: 121306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.215C>T
  hgvsp: ENSP00000468384.1:p.Arg73Trp
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.865C>T
  hgvsp: ENSP00000396548.2:p.Arg289Trp
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1078C>T
  hgvsp: ENSP00000468051.1:p.Arg360Trp
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.958C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.958C>T
  hgvsp: ENSP00000320309.3:p.Arg320Trp
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.705C>T
  hgvsp: ENSP00000467384.1:p.Arg236Trp
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*212C>T
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9306
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17873
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2178
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8839
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg320Trp
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum

19-13035786-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035786
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035786
    reference: chr 19
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1078C>G
  hgvsp: ENSP00000468051.1:p.Arg360Gly
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.705C>G
  hgvsp: ENSP00000467384.1:p.Arg236Gly
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*212C>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.865C>G
  hgvsp: ENSP00000396548.2:p.Arg289Gly
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.958C>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.215C>G
  hgvsp: ENSP00000468384.1:p.Arg73Gly
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.958C>G
  hgvsp: ENSP00000320309.3:p.Arg320Gly
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9306
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17873
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8839
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1699
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg320Gly
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

19-13035789-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035789
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035789
    reference: chr 19
allele count: 1
allele frequency: 8.245110649384915e-6
allele num: 121284
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.955G>A
  hgvsp: ENSP00000320309.3:p.Ala319Thr
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*209G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.702G>A
  hgvsp: ENSP00000467384.1:p.Ala235Thr
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1075G>A
  hgvsp: ENSP00000468051.1:p.Ala359Thr
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.955G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.212G>A
  hgvsp: ENSP00000468384.1:p.Ala72Thr
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.862G>A
  hgvsp: ENSP00000396548.2:p.Ala288Thr
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30632
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17869
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2176
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1698
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala319Thr
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

19-13035792-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035792
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035792
    reference: chr 19
allele count: 1
allele frequency: 8.246606521416436e-6
allele num: 121262
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.859G>A
  hgvsp: ENSP00000396548.2:p.Glu287Lys
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.952G>A
  hgvsp: ENSP00000320309.3:p.Glu318Lys
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*206G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.209G>A
  hgvsp: ENSP00000468384.1:p.Glu71Lys
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.699G>A
  hgvsp: ENSP00000467384.1:p.Glu234Lys
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1072G>A
  hgvsp: ENSP00000468051.1:p.Glu358Lys
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.952G>A
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 30623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17860
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu318Lys
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

19-13035793-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035793
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035793
    reference: chr 19
allele count: 71
allele frequency: 5.854994062541232e-4
allele num: 121264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.208C>T
  hgvsp: ENST00000587488.1:c.208C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.698C>T
  hgvsp: ENST00000593021.1:c.698C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1071C>T
  hgvsp: ENST00000588025.1:c.1071C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.951C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*205C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.951C>T
  hgvsp: ENST00000314606.4:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.858C>T
  hgvsp: ENST00000423140.2:c.858C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17854
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30606
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 9.75e1
  variant carriers: 71
genotype quality: GenotypeQuality
  all individuals: 8825
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asp317Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ

19-13035795-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035795
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035795
    reference: chr 19
allele count: 15
allele frequency: 1.237031783469957e-4
allele num: 121258
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1069G>C
  hgvsp: ENSP00000468051.1:p.Asp357His
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.696G>C
  hgvsp: ENSP00000467384.1:p.Asp233His
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.206G>C
  hgvsp: ENSP00000468384.1:p.Asp70His
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.949G>C
  hgvsp: ENSP00000320309.3:p.Asp317His
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.856G>C
  hgvsp: ENSP00000396548.2:p.Asp286His
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*203G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.949G>C
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46072
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1698
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp317His
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

19-13035797-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035797
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035797
    reference: chr 19
allele count: 9
allele frequency: 7.422557978425098e-5
allele num: 121252
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.204T>C
  hgvsp: ENSP00000468384.1:p.Leu69Pro
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1067T>C
  hgvsp: ENSP00000468051.1:p.Leu356Pro
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.854T>C
  hgvsp: ENSP00000396548.2:p.Leu285Pro
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.947T>C
  hgvsp: ENSP00000320309.3:p.Leu316Pro
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.947T>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*201T>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.694T>C
  hgvsp: ENSP00000467384.1:p.Leu232Pro
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17861
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 30624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2166
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8829
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu316Pro
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

19-13035799-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035799
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035799
    reference: chr 19
allele count: 1
allele frequency: 8.248239000973292e-6
allele num: 121238
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.945G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.692G>C
  hgvsp: ENSP00000467384.1:p.Lys231Asn
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.852G>C
  hgvsp: ENSP00000396548.2:p.Lys284Asn
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1065G>C
  hgvsp: ENSP00000468051.1:p.Lys355Asn
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*199G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.202G>C
  hgvsp: ENSP00000468384.1:p.Lys68Asn
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.945G>C
  hgvsp: ENSP00000320309.3:p.Lys315Asn
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17861
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30610
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1696
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8825
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Lys315Asn
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum

19-13035812-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035812
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035812
    reference: chr 19
allele count: 1
allele frequency: 8.255729476256522e-6
allele num: 121128
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.932A>T
  hgvsp: ENSP00000320309.3:p.Lys311Met
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.932A>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.189A>T
  hgvsp: ENSP00000468384.1:p.Lys64Met
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.839A>T
  hgvsp: ENSP00000396548.2:p.Lys280Met
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1052A>T
  hgvsp: ENSP00000468051.1:p.Lys351Met
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*186A>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.679A>T
  hgvsp: ENSP00000467384.1:p.Lys227Met
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30542
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2163
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Lys311Met
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-13035825-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035825
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035825
    reference: chr 19
allele count: 1
allele frequency: 8.278282753025713e-6
allele num: 120798
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.674-8T>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.927-8T>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.927-8T>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*181-8T>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.184-8T>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1047-8T>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.834-8T>G
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9242
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30328
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17604
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45476
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2148
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
hgvs: c.927-8T>G
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

19-13035828-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035828
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035828
    reference: chr 19
allele count: 1
allele frequency: 8.289674381590291e-6
allele num: 120632
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.674-11C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1047-11C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.834-11C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*181-11C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.184-11C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.927-11C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.927-11C>T
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30230
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8674
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

19-13035830-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035830
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035830
    reference: chr 19
allele count: 1
allele frequency: 8.290499088045101e-6
allele num: 120620
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.674-13T>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*181-13T>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.927-13T>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.927-13T>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.834-13T>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.184-13T>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1047-13T>C
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17555
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30232
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9162
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1670
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8672
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

19-13035835-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035835
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035835
    reference: chr 19
allele count: 1
allele frequency: 8.315316813570598e-6
allele num: 120260
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1047-18C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.927-18C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.927-18C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.184-18C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.674-18C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*181-18C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.834-18C>T
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29952
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9067
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1656
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8582
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum

19-13035844-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035844
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035844
    reference: chr 19
allele count: 4
allele frequency: 3.34520882466088e-5
allele num: 119574
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1047-27A>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.927-27A>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.927-27A>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*181-27A>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.184-27A>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.674-27A>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.834-27A>G
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8701
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29359
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17212
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1780
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43644
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2068
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1625
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8369
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

19-13035849-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035849
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035849
    reference: chr 19
allele count: 1
allele frequency: 8.408731626921395e-6
allele num: 118924
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*181-32A>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.927-32A>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.184-32A>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.834-32A>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1047-32A>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.674-32A>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.927-32A>G
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28692
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17141
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8394
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1607
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2386
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ

19-13035853-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035853
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035853
    reference: chr 19
allele count: 2
allele frequency: 1.699610789129289e-5
allele num: 117674
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.927-36G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.674-36G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.834-36G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.184-36G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1047-36G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*181-36G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.927-36G>C
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7627
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27484
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17379
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3426
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1463
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40070
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

19-13035859-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035859
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035859
    reference: chr 19
allele count: 1
allele frequency: 8.524131817174421e-6
allele num: 117314
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*181-42C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.927-42C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.184-42C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.927-42C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.674-42C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1047-42C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.834-42C>T
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2612
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27109
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7116
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7293
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40864
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3779
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/19-13035876-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035876
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035876
    reference: chr 19
allele count: 1
allele frequency: 8.83033396323049e-6
allele num: 113246
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.183+28G>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*180+28G>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.926+28G>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.833+28G>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1046+28G>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.673+28G>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.926+28G>T
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23340
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3804
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1352
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37618
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1213
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6826
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6000
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1510
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS

19-13035876-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035876
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035876
    reference: chr 19
allele count: 1
allele frequency: 8.83033396323049e-6
allele num: 113246
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*180+28G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1046+28G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.673+28G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.183+28G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.833+28G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.926+28G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.926+28G>A
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3804
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23340
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6826
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6000
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1213
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1352
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum

19-13035876-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035876
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035876
    reference: chr 19
allele count: 1
allele frequency: 8.83033396323049e-6
allele num: 113246
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.183+28G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*180+28G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.833+28G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1046+28G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.673+28G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.926+28G>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.926+28G>C
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3804
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23340
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37618
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1352
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1083
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1213
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

19-13035886-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035886
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035885
    reference: chr 19
allele count: 1
allele frequency: 9.090247981964949e-6
allele num: 110008
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.673+17delC
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.926+17delC
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.833+17delC
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.926+17delC
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.183+17delC
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1046+17delC
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*180+17delC
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5227
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18767
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5796
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20803
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9192
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1256
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1381
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34776
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5409
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1055
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: AG
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

19-13035888-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035888
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035889
    reference: chr 19
allele count: 1384
allele frequency: 1.265244181156638e-2
allele num: 109386
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*180+15dupA
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.926+15dupA
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.833+15dupA
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.673+15dupA
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.926+15dupA
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1046+15dupA
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.183+15dupA
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 3.75e1
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 3392
  bin: 1.75e1
  variant carriers: 185
genotype depth: GenotypeDepth
  all individuals: 18641
  bin: 2.25e1
  variant carriers: 228
genotype depth: GenotypeDepth
  all individuals: 6222
  bin: 1.25e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 5668
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.75e1
  variant carriers: 167
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 19952
  bin: 2.75e1
  variant carriers: 198
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4630
  bin: 3.25e1
  variant carriers: 145
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1392
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 8.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9648
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1277
  bin: 7.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 7.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1608
  bin: 9.75e1
  variant carriers: 1240
genotype quality: GenotypeQuality
  all individuals: 33153
  bin: 6.25e1
  variant carriers: 4
num of homozygotes: 85
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

19-13035889-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035889
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035889
    reference: chr 19
allele count: 1
allele frequency: 9.382623381497466e-6
allele num: 106580
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1046+15A>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.673+15A>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*180+15A>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.183+15A>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.926+15A>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.926+15A>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.833+15A>T
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5806
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6305
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32965
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS

19-13035889-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035889
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035889
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 106580
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.833+15A>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1046+15A>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.673+15A>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.926+15A>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.926+15A>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.183+15A>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*180+15A>C
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 4513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5806
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6305
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9887
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5084
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32965
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

19-13035892-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035892
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035892
    reference: chr 19
allele count: 6
allele frequency: 5.561838372976881e-5
allele num: 107878
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.833+12C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.673+12C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.926+12C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*180+12C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1046+12C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.183+12C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.926+12C>T
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18670
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6412
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19036
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6850
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 986
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1546
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32550
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 9.75e1
  variant carriers: 6
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

19-13035899-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035899
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035899
    reference: chr 19
allele count: 1
allele frequency: 9.488746346832657e-6
allele num: 105388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.183+5G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1046+5G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.673+5G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.833+5G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.926+5G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*180+5G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.926+5G>A
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7611
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7776
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17399
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3371
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 865
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1707
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1310
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1127
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12663
  bin: 2.25e1
  variant carriers: 0
hgvs: c.926+5G>A
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum

19-13035914-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035914
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035914
    reference: chr 19
allele count: 6
allele frequency: 6.224970431390451e-5
allele num: 96386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.663G>A
  hgvsp: ENSP00000467384.1:p.Gly222Ser
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*170G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.916G>A
  hgvsp: ENSP00000320309.3:p.Gly306Ser
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.173G>A
  hgvsp: ENSP00000468384.1:p.Gly59Ser
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1036G>A
  hgvsp: ENSP00000468051.1:p.Gly346Ser
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.823G>A
  hgvsp: ENSP00000396548.2:p.Gly275Ser
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.916G>A
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13499
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3230
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10915
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11784
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15878
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2130
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2155
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly306Ser
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

19-13035915-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035915
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035915
    reference: chr 19
allele count: 8
allele frequency: 8.330382989357935e-5
allele num: 96034
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*169C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1035C>T
  hgvsp: ENST00000588025.1:c.1035C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.822C>T
  hgvsp: ENST00000423140.2:c.822C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.915C>T
  hgvsp: ENST00000314606.4:c.915C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.662C>T
  hgvsp: ENST00000593021.1:c.662C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.172C>T
  hgvsp: ENST00000587488.1:c.172C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.915C>T
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11859
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3178
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10914
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3286
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16032
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13473
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2103
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19229
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 9.75e1
  variant carriers: 7
hgvs: p.Tyr305Tyr
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

19-13035920-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035920
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035920
    reference: chr 19
allele count: 5
allele frequency: 5.35240215808855e-5
allele num: 93416
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1030G>A
  hgvsp: ENSP00000468051.1:p.Gly344Ser
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.657G>A
  hgvsp: ENSP00000467384.1:p.Gly220Ser
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.910G>A
  hgvsp: ENSP00000320309.3:p.Gly304Ser
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.817G>A
  hgvsp: ENSP00000396548.2:p.Gly273Ser
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.167G>A
  hgvsp: ENSP00000468384.1:p.Gly57Ser
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.910G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*164G>A
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15580
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11790
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12018
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2216
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1281
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24449
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21159
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly304Ser
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

19-13035921-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035921
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035921
    reference: chr 19
allele count: 2
allele frequency: 2.160060481693487e-5
allele num: 92590
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.909C>T
  hgvsp: ENST00000314606.4:c.909C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.166C>T
  hgvsp: ENST00000587488.1:c.166C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.909C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*163C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.816C>T
  hgvsp: ENST00000423140.2:c.816C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1029C>T
  hgvsp: ENST00000588025.1:c.1029C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.656C>T
  hgvsp: ENST00000593021.1:c.656C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15371
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12009
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11738
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2182
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24040
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21633
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly303Gly
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

19-13035923-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035923
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035923
    reference: chr 19
allele count: 1
allele frequency: 1.090464974265027e-5
allele num: 91704
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1027G>A
  hgvsp: ENSP00000468051.1:p.Gly343Ser
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*161G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.907G>A
  hgvsp: ENSP00000320309.3:p.Gly303Ser
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.164G>A
  hgvsp: ENSP00000468384.1:p.Gly56Ser
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.654G>A
  hgvsp: ENSP00000467384.1:p.Gly219Ser
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.814G>A
  hgvsp: ENSP00000396548.2:p.Gly272Ser
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.907G>A
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14031
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14876
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22518
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3188
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23697
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly303Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

19-13035928-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035928
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035928
    reference: chr 19
allele count: 1
allele frequency: 1.14892345871918e-5
allele num: 87038
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.159C>G
  hgvsp: ENSP00000468384.1:p.Ser54Cys
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*156C>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.809C>G
  hgvsp: ENSP00000396548.2:p.Ser270Cys
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.649C>G
  hgvsp: ENSP00000467384.1:p.Ser217Cys
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1022C>G
  hgvsp: ENSP00000468051.1:p.Ser341Cys
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.902C>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.902C>G
  hgvsp: ENSP00000320309.3:p.Ser301Cys
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3461
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12105
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10111
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14011
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2442
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2831
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 938
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25567
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser301Cys
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/19-13035936-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035936
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035936
    reference: chr 19
allele count: 3
allele frequency: 3.793147047667215e-5
allele num: 79090
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.801G>T
  hgvsp: ENST00000423140.2:c.801G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1014G>T
  hgvsp: ENST00000588025.1:c.1014G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.641G>T
  hgvsp: ENST00000593021.1:c.641G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.894G>T
  hgvsp: ENST00000314606.4:c.894G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*148G>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.894G>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.151G>T
  hgvsp: ENST00000587488.1:c.151G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15448
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9899
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1965
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13670
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1448
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28452
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2616
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1551
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg298Arg
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD

19-13035942-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035942
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035942
    reference: chr 19
allele count: 2
allele frequency: 2.628535380086216e-5
allele num: 76088
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.795C>T
  hgvsp: ENST00000423140.2:c.795C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.888C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.888C>T
  hgvsp: ENST00000314606.4:c.888C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*142C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1008C>T
  hgvsp: ENST00000588025.1:c.1008C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.145C>T
  hgvsp: ENST00000587488.1:c.145C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.635C>T
  hgvsp: ENST00000593021.1:c.635C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15455
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3479
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20486
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6297
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13404
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1851
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1450
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val296Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ

19-13035945-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035945
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035945
    reference: chr 19
allele count: 1
allele frequency: 1.330388739589708e-5
allele num: 75166
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.885G>A
  hgvsp: ENST00000314606.4:c.885G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*139G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.1005G>A
  hgvsp: ENST00000588025.1:c.1005G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.792G>A
  hgvsp: ENST00000423140.2:c.792G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.142G>A
  hgvsp: ENST00000587488.1:c.142G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.632G>A
  hgvsp: ENST00000593021.1:c.632G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.885G>A
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9889
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20880
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15384
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1096
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1806
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 796
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2317
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1294
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2484
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg295Arg
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-13035952-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035952
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035952
    reference: chr 19
allele count: 1
allele frequency: 1.414627245720753e-5
allele num: 70690
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.998T>C
  hgvsp: ENSP00000468051.1:p.Val333Ala
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.135T>C
  hgvsp: ENSP00000468384.1:p.Val46Ala
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*132T>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.785T>C
  hgvsp: ENSP00000396548.2:p.Val262Ala
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.878T>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.625T>C
  hgvsp: ENSP00000467384.1:p.Val209Ala
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.878T>C
  hgvsp: ENSP00000320309.3:p.Val293Ala
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2425
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22702
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9235
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5355
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15356
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2314
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32815
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2312
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2008
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13314
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val293Ala
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD

19-13035962-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035962
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035962
    reference: chr 19
allele count: 1
allele frequency: 1.532097441397273e-5
allele num: 65270
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.125A>G
  hgvsp: ENSP00000468384.1:p.Met43Val
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.615A>G
  hgvsp: ENSP00000467384.1:p.Met206Val
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.988A>G
  hgvsp: ENSP00000468051.1:p.Met330Val
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*122A>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.868A>G
  hgvsp: ENSP00000320309.3:p.Met290Val
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.868A>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.775A>G
  hgvsp: ENSP00000396548.2:p.Met259Val
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3772
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16042
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4563
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23902
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34360
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1855
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1194
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2274
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Met290Val
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-13035965-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035965
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035965
    reference: chr 19
allele count: 1
allele frequency: 1.61025409809668e-5
allele num: 62102
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.865C>A
  hgvsp: ENSP00000320309.3:p.Pro289Thr
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.772C>A
  hgvsp: ENSP00000396548.2:p.Pro258Thr
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*119C>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.865C>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.985C>A
  hgvsp: ENSP00000468051.1:p.Pro329Thr
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.612C>A
  hgvsp: ENSP00000467384.1:p.Pro205Thr
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.122C>A
  hgvsp: ENSP00000468384.1:p.Pro42Thr
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4782
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4127
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15930
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24240
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2149
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33885
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1790
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro289Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

19-13035971-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035971
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035971
    reference: chr 19
allele count: 1
allele frequency: 1.689588754097253e-5
allele num: 59186
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.766C>T
  hgvsp: ENSP00000396548.2:p.Gln256Ter
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.859C>T
  hgvsp: ENSP00000320309.3:p.Gln287Ter
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.606C>T
  hgvsp: ENSP00000467384.1:p.Gln203Ter
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.116C>T
  hgvsp: ENSP00000468384.1:p.Gln40Ter
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*113C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.979C>T
  hgvsp: ENSP00000468051.1:p.Gln327Ter
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.859C>T
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5765
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1731
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15604
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24729
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3799
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5879
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1555
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34626
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6116
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln287Ter
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS

19-13035973-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035973
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035973
    reference: chr 19
allele count: 1
allele frequency: 1.752725488134048e-5
allele num: 57054
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.857T>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*111T>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.977T>C
  hgvsp: ENSP00000468051.1:p.Leu326Pro
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.857T>C
  hgvsp: ENSP00000320309.3:p.Leu286Pro
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.764T>C
  hgvsp: ENSP00000396548.2:p.Leu255Pro
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.114T>C
  hgvsp: ENSP00000468384.1:p.Leu39Pro
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.604T>C
  hgvsp: ENSP00000467384.1:p.Leu202Pro
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6687
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24722
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15368
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5481
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1401
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1613
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7069
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34081
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1928
  bin: 2.75e1
  variant carriers: 1
hgvs: p.Leu286Pro
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

19-13035975-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035975
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035975
    reference: chr 19
allele count: 1
allele frequency: 1.824750921499215e-5
allele num: 54802
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.975C>A
  hgvsp: ENST00000588025.1:c.975C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.855C>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.855C>A
  hgvsp: ENST00000314606.4:c.855C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.112C>A
  hgvsp: ENST00000587488.1:c.112C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*109C>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.602C>A
  hgvsp: ENST00000593021.1:c.602C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.762C>A
  hgvsp: ENST00000423140.2:c.762C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5132
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14872
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24691
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7919
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8321
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala285Ala
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

19-13035981-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035981
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035981
    reference: chr 19
allele count: 223
allele frequency: 4.31351309528415e-3
allele num: 51698
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.106G>A
  hgvsp: ENST00000587488.1:c.106G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.756G>A
  hgvsp: ENST00000423140.2:c.756G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.849G>A
  hgvsp: ENST00000314606.4:c.849G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.596G>A
  hgvsp: ENST00000593021.1:c.596G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.849G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*103G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.969G>A
  hgvsp: ENST00000588025.1:c.969G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 2.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14059
  bin: 1.25e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 24704
  bin: 7.5e0
  variant carriers: 86
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9452
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 1.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 3.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 32750
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1123
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 9945
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1328
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1597
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 7
hgvs: p.Ala283Ala
num of homozygotes: 2
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-13035982-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035982
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035982
    reference: chr 19
allele count: 6
allele frequency: 1.202549404738045e-4
allele num: 49894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.595C>T
  hgvsp: ENSP00000467384.1:p.Ala199Val
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.848C>T
  hgvsp: ENSP00000320309.3:p.Ala283Val
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*102C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.105C>T
  hgvsp: ENSP00000468384.1:p.Ala36Val
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.755C>T
  hgvsp: ENSP00000396548.2:p.Ala252Val
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.848C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.968C>T
  hgvsp: ENSP00000468051.1:p.Ala323Val
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10346
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24516
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3147
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13676
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4710
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7693
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1519
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 9.25e1
  variant carriers: 1
hgvs: p.Ala283Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

19-13035984-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13035984
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13035984
    reference: chr 19
allele count: 1
allele frequency: 2.018000565040158e-5
allele num: 49554
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*100A>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.846A>C
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.966A>C
  hgvsp: ENST00000588025.1:c.966A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.846A>C
  hgvsp: ENST00000314606.4:c.846A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.593A>C
  hgvsp: ENST00000593021.1:c.593A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.103A>C
  hgvsp: ENST00000587488.1:c.103A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.753A>C
  hgvsp: ENST00000423140.2:c.753A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3133
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10735
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13393
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24612
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1687
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1320
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32437
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11300
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro282Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

19-13036022-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13036022
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13036022
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 24972
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.962-34G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.842-34G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.589-34G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.99-34G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*96-34G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.749-34G>A
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.842-34G>A
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15657
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26360
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3800
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2583
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4201
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31161
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7111
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

19-13036023-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13036023
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13036023
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 24904
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*96-35C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.589-35C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.842-35C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.99-35C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.749-35C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.962-35C>T
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.842-35C>T
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15593
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3750
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26441
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3418
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4219
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2590
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31268
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/19-13036034-A-AC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13036034
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13036035
    reference: chr 19
allele count: 3
allele frequency: 2.665718855518038e-4
allele num: 11254
alternate allele: AC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.842-47dupG
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.749-47dupG
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*96-47dupG
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.962-47dupG
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.99-47dupG
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.842-47dupG
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.589-47dupG
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14532
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25004
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1720
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2943
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
reference allele: A
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-13036034-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13036034
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13036034
    reference: chr 19
allele count: 843
allele frequency: 7.490669984005686e-2
allele num: 11254
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.842-46T>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.589-46T>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.99-46T>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.962-46T>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.842-46T>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*96-46T>G
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.749-46T>G
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 14532
  bin: 7.5e0
  variant carriers: 84
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 2.75e1
  variant carriers: 211
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 1.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 3.75e1
  variant carriers: 194
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 3.25e1
  variant carriers: 243
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.25e1
  variant carriers: 156
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 2.25e1
  variant carriers: 166
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 1.75e1
  variant carriers: 95
genotype depth: GenotypeDepth
  all individuals: 25004
  bin: 2.5e0
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 6.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 7.25e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 8.25e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 3.25e1
  variant carriers: 108
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 7.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 2943
  bin: 1.25e1
  variant carriers: 144
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 5.25e1
  variant carriers: 72
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 6.25e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 20244
  bin: 2.5e0
  variant carriers: 133
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 8.75e1
  variant carriers: 19
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

19-13036038-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13036038
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13036037
    reference: chr 19
allele count: 1723
allele frequency: 1.694865237064725e-1
allele num: 10166
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*96-51delA
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.842-51delA
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.589-51delA
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.842-51delA
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.962-51delA
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.99-51delA
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.749-51delA
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 2.25e1
  variant carriers: 505
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 15486
  bin: 7.5e0
  variant carriers: 260
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 1.75e1
  variant carriers: 461
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2414
  bin: 1.25e1
  variant carriers: 251
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 3.75e1
  variant carriers: 119
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 24375
  bin: 2.5e0
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 2.75e1
  variant carriers: 361
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 3.25e1
  variant carriers: 220
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 4.25e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1338
  bin: 2.25e1
  variant carriers: 115
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 7.25e1
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 4.25e1
  variant carriers: 172
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 3.25e1
  variant carriers: 123
genotype quality: GenotypeQuality
  all individuals: 2000
  bin: 1.75e1
  variant carriers: 132
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 6.25e1
  variant carriers: 149
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 7.75e1
  variant carriers: 59
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 2.75e1
  variant carriers: 131
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 5.75e1
  variant carriers: 127
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 9.25e1
  variant carriers: 45
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: CT
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

19-13036038-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 13036038
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 13036039
    reference: chr 19
allele count: 1536
allele frequency: 1.510918748770411e-1
allele num: 10166
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468384
  ensembl transcript: ENST00000587488
  gene symbol: FARSA
  hgvsc: ENST00000587488.1:c.99-51dupA
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000467384
  ensembl transcript: ENST00000593021
  gene symbol: FARSA
  hgvsc: ENST00000593021.1:c.589-51dupA
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000320309
  ensembl transcript: ENST00000314606
  gene symbol: FARSA
  hgvsc: ENST00000314606.4:c.842-51dupA
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000396548
  ensembl transcript: ENST00000423140
  gene symbol: FARSA
  hgvsc: ENST00000423140.2:c.749-51dupA
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl transcript: ENST00000588965
  gene symbol: FARSA
  hgvsc: ENST00000588965.1:n.842-51dupA
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468068
  ensembl transcript: ENST00000586146
  gene symbol: FARSA
  hgvsc: ENST00000586146.1:c.*96-51dupA
  variant of: http://identifiers.org/hgnc/3592
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000179115
  ensembl protein: ENSP00000468051
  ensembl transcript: ENST00000588025
  gene symbol: FARSA
  hgvsc: ENST00000588025.1:c.962-51dupA
  variant of: http://identifiers.org/hgnc/3592
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 2.75e1
  variant carriers: 447
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 3.25e1
  variant carriers: 235
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 1.75e1
  variant carriers: 400
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 2.25e1
  variant carriers: 575
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 15486
  bin: 7.5e0
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 24375
  bin: 2.5e0
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2414
  bin: 1.25e1
  variant carriers: 132
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 4.25e1
  variant carriers: 55
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1513
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 87
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2207
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44291
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.016048566448278e-5
allele num: 66548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.15e0

DP
type: SiteQuality
SIO_000300: 1.665646e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-1

FS
type: SiteQuality
SIO_000300: 5.23e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.49e0

QD
type: SiteQuality
SIO_000300: 1.32e1

GenotypeQuality
all individuals: 81
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44335
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1832
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 9.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66556
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.728608470181504e-4
allele num: 11570
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.31e-1

QD
type: SiteQuality
SIO_000300: 1.454e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.79e-1

MQ
type: SiteQuality
SIO_000300: 6.036e1

DP
type: SiteQuality
SIO_000300: 1.665663e6

FS
type: SiteQuality
SIO_000300: 1.142e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.95e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66556
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

African
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allele count: 6
allele frequency: 5.794861889124976e-4
allele num: 10354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.665663e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.036e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.79e-1

QD
type: SiteQuality
SIO_000300: 1.454e1

FS
type: SiteQuality
SIO_000300: 1.142e0

MQRankSum
type: SiteQuality
SIO_000300: 4.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.505722267279445e-5
allele num: 66582
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.666459e6

MQ
type: SiteQuality
SIO_000300: 5.948e1

FS
type: SiteQuality
SIO_000300: 8.182e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.16e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.353e1

VQSLOD
type: SiteQuality
SIO_000300: 1.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.552e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.211680600993578e-4
allele num: 16506
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.02e-1

FS
type: SiteQuality
SIO_000300: 1.944e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

QD
type: SiteQuality
SIO_000300: 1.333e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.263e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

DP
type: SiteQuality
SIO_000300: 1.667955e6

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 8

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.846722403974312e-4
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.02e-1

QD
type: SiteQuality
SIO_000300: 1.333e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.263e0

FS
type: SiteQuality
SIO_000300: 1.944e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

DP
type: SiteQuality
SIO_000300: 1.667955e6

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728608470181504e-4
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501636784094663e-5
allele num: 66594
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.02e-1

QD
type: SiteQuality
SIO_000300: 1.333e1

FS
type: SiteQuality
SIO_000300: 1.944e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

DP
type: SiteQuality
SIO_000300: 1.667955e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.263e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1508
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variant carriers: 2

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002642325246217e-5
allele num: 66608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.870000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 1.249e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.965e1

DP
type: SiteQuality
SIO_000300: 1.667954e6

QD
type: SiteQuality
SIO_000300: 1.5e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2523

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 1

African
type: Population
allele count: 70
allele frequency: 6.739842095128057e-3
allele num: 10386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1961
allele frequency: 2.94391400948778e-2
allele num: 66612
num of homozygotes: 24

Other
type: Population
allele count: 17
allele frequency: 1.876379690949227e-2
allele num: 906
num of homozygotes: 1

South Asian
type: Population
allele count: 33
allele frequency: 1.998546511627907e-3
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 87
allele frequency: 7.519446845289542e-3
allele num: 11570
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 396
allele frequency: 5.99273607748184e-2
allele num: 6608
num of homozygotes: 12

MQRankSum
type: SiteQuality
SIO_000300: 1.51e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

DP
type: SiteQuality
SIO_000300: 1.857825e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.9e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2178
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50105073551486e-5
allele num: 66620
num of homozygotes: 0

Other
type: Population
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VQSLOD
type: SiteQuality
SIO_000300: 2.8e-1

MQ
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 3.3e-2

FS
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
type: SiteQuality
SIO_000300: -5.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.108e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500510173458976e-5
allele num: 66644
num of homozygotes: 0

QD
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MQ
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MQRankSum
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DP
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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SIO_000300: 1.22e0

InbreedingCoeff
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FS
type: SiteQuality
SIO_000300: 9.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.58e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 33

GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
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allele count: 25
allele frequency: 3.750712635400726e-4
allele num: 66654
num of homozygotes: 0

South Asian
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allele frequency: 3.028100775193798e-4
allele num: 16512
num of homozygotes: 0

Other
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allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

FS
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ClippingRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQ
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VQSLOD
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MQRankSum
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SIO_000300: 4.06e-1

QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.500060002400096e-5
allele num: 66664
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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FS
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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QD
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ReadPosRankSum
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DP
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.985e1

VQSLOD
type: SiteQuality
SIO_000300: 7.71e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Latino
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allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66664
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
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QD
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FS
type: SiteQuality
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MQ
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SIO_000300: 5.985e1

ReadPosRankSum
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BaseQRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

DP
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SIO_000300: 1.636397e6

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.000030000300003e-5
allele num: 66666
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Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 8.63e-1

MQRankSum
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

MQ
type: SiteQuality
SIO_000300: 5.98e1

DP
type: SiteQuality
SIO_000300: 1.636771e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
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ReadPosRankSum
type: SiteQuality
SIO_000300: 9.73e-1

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.474e0

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.952e1

DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66682
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
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allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

VQSLOD
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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FS
type: SiteQuality
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DP
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ClippingRankSum
type: SiteQuality
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QD
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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allele num: 8652
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Latino
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allele num: 11572
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African
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South Asian
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Other
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QD
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DP
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FS
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BaseQRankSum
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VQSLOD
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
type: SiteQuality
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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South Asian
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Latino
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Other
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InbreedingCoeff
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VQSLOD
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FS
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ReadPosRankSum
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QD
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DP
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ClippingRankSum
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MQRankSum
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

East Asian
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allele num: 8652
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South Asian
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European (Finnish)
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African
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Other
type: Population
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Latino
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
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FS
type: SiteQuality
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MQ
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VQSLOD
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DP
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InbreedingCoeff
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QD
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 16

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
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allele count: 5
allele frequency: 7.584951456310679e-4
allele num: 6592
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
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allele count: 11
allele frequency: 1.649175412293853e-4
allele num: 66700
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -1.0e-4

QD
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.637665e6

MQ
type: SiteQuality
SIO_000300: 5.977e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

FS
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DP
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SIO_000300: 1.636317e6

MQ
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: 7.93e-1

MQRankSum
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QD
type: SiteQuality
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ClippingRankSum
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SIO_000300: -3.66e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 3
allele frequency: 3.467406380027739e-4
allele num: 8652
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.979e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.88e-1

InbreedingCoeff
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SIO_000300: 0.0e0

BaseQRankSum
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QD
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.71e-1

DP
type: SiteQuality
SIO_000300: 1.636449e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.38e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
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allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.299e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.88e-1

FS
type: SiteQuality
SIO_000300: 5.71e-1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.979e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.544e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.12e0

DP
type: SiteQuality
SIO_000300: 1.636449e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.07e-1

DP
type: SiteQuality
SIO_000300: 1.635446e6

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.04e-1

MQ
type: SiteQuality
SIO_000300: 5.916e1

QD
type: SiteQuality
SIO_000300: 1.013e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
num of homozygotes: 0

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 2.4e-1

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.881e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499700059988002e-5
allele num: 66680
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

Latino
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allele count: 5
allele frequency: 4.320027648176948e-4
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 64
allele frequency: 6.155029813425659e-3
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.108647450110865e-3
allele num: 902
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele num: 16510
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QD
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MQRankSum
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.42e-1

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 27
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variant carriers: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.249752527222006e-4
allele num: 66674
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South Asian
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Other
type: Population
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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DP
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MQ
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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InbreedingCoeff
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QD
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele num: 900
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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South Asian
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African
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European (Non-Finnish)
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East Asian
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DP
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FS
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QD
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VQSLOD
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MQRankSum
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BaseQRankSum
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MQ
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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African
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European (Non-Finnish)
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allele frequency: 1.5001500150015e-5
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East Asian
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.75e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.544e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.63367e6

BaseQRankSum
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SIO_000300: -2.773e0

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

QD
type: SiteQuality
SIO_000300: 1.441e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66608
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.565e0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 8.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e-2

BaseQRankSum
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SIO_000300: -1.309e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.631281e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.633911368015414e-5
allele num: 10380
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66444
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.447e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-1

FS
type: SiteQuality
SIO_000300: 7.102e0

QD
type: SiteQuality
SIO_000300: 1.869e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.28e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.963e-1

DP
type: SiteQuality
SIO_000300: 1.624552e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6340
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.066488716330988e-5
allele num: 16484
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.799e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.681e0

VQSLOD
type: SiteQuality
SIO_000300: -2.013e0

QD
type: SiteQuality
SIO_000300: 1.093e1

DP
type: SiteQuality
SIO_000300: 1.620309e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158211721102618e-4
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66356
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.83e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.08e-1

QD
type: SiteQuality
SIO_000300: 1.522e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.620104e6

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.78e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6276
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511487303506651e-5
allele num: 66160
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.573e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.864e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.39e-1

DP
type: SiteQuality
SIO_000300: 1.611844e6

FS
type: SiteQuality
SIO_000300: 8.02e-1

MQ
type: SiteQuality
SIO_000300: 5.828e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.096e1

MQRankSum
type: SiteQuality
SIO_000300: -5.84e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.520357588104722e-5
allele num: 65774
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.745845723281441e-5
allele num: 11434
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6220
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.946661475569399e-4
allele num: 10274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.919e1

MQRankSum
type: SiteQuality
SIO_000300: 6.06e-1

FS
type: SiteQuality
SIO_000300: 1.999e0

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.03e-1

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.17e-1

DP
type: SiteQuality
SIO_000300: 1.592079e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.528584530724549e-5
allele num: 65420
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11336
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
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VQSLOD
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6008
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.089852923000865e-5
allele num: 64728
num of homozygotes: 0

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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DP
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ClippingRankSum
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.549955051303512e-5
allele num: 64518
num of homozygotes: 0

East Asian
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num of homozygotes: 0

QD
type: SiteQuality
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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ReadPosRankSum
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FS
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 547
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15886
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9774
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5596
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.600768368817032e-5
allele num: 62470
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8124
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.439213e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

QD
type: SiteQuality
SIO_000300: 1.745e1

VQSLOD
type: SiteQuality
SIO_000300: -4.533e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.906e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5596
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 15886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.023122570083896e-4
allele num: 9774
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10568
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62470
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

VQSLOD
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MQ
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SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.906e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.745e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.439213e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.94e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62470
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8124
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.294850812035755e-5
allele num: 15886
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9774
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.906e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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DP
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SIO_000300: 1.439213e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

VQSLOD
type: SiteQuality
SIO_000300: -4.533e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 169
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.074806534823732e-4
allele num: 9304
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60896
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.494e1

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

MQRankSum
type: SiteQuality
SIO_000300: 1.45e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.76e-1

MQ
type: SiteQuality
SIO_000300: 6.008e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.57e-1

FS
type: SiteQuality
SIO_000300: 3.667e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

DP
type: SiteQuality
SIO_000300: 1.378926e6

GenotypeQuality
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bin: 6.75e1
variant carriers: 3

GenotypeQuality
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bin: 8.75e1
variant carriers: 3

GenotypeQuality
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bin: 5.25e1
variant carriers: 6

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 5

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 7

GenotypeQuality
all individuals: 928
bin: 4.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7826
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.15913230667329e-4
allele num: 60390
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.481721545242416e-5
allele num: 15428
num of homozygotes: 0

Latino
type: Population
allele count: 37
allele frequency: 3.685258964143426e-3
allele num: 10040
num of homozygotes: 0

African
type: Population
allele count: 1336
allele frequency: 1.390218522372529e-1
allele num: 9610
num of homozygotes: 85

Other
type: Population
allele count: 3
allele frequency: 3.759398496240601e-3
allele num: 798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5294
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.646e1

MQRankSum
type: SiteQuality
SIO_000300: 3.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

DP
type: SiteQuality
SIO_000300: 1.378286e6

FS
type: SiteQuality
SIO_000300: 5.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.83e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.429999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.0e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 9887
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1610
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5084
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GenotypeQuality
all individuals: 564
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9938
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7098
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.494349915573451e-5
allele num: 15398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7820
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5272
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.375414e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.17e-1

QD
type: SiteQuality
SIO_000300: 1.24e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.21e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.783e0

GenotypeQuality
all individuals: 564
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 977
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GenotypeQuality
all individuals: 136
bin: 9.25e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9938
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7820
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60256
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7098
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15398
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.17e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.783e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.21e0

DP
type: SiteQuality
SIO_000300: 1.375414e6

QD
type: SiteQuality
SIO_000300: 1.24e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.375209380234506e-5
allele num: 59700
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5184
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9266
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.521455588887439e-5
allele num: 15334
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.67e-1

MQ
type: SiteQuality
SIO_000300: 5.909e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 8.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.328127e6

QD
type: SiteQuality
SIO_000300: 1.383e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.103022281050077e-4
allele num: 9066
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58358
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 1.288118e6

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.918e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.84e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.51e-1

GenotypeQuality
all individuals: 1386
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 349
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GenotypeQuality
all individuals: 119
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6702
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8408
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.034327518289252e-5
allele num: 14216
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4332
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.364066193853428e-4
allele num: 8460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.60245013819377e-5
allele num: 53548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 720
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -9.4e-2

QD
type: SiteQuality
SIO_000300: 1.254e1

MQ
type: SiteQuality
SIO_000300: 5.918e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.03e-1

FS
type: SiteQuality
SIO_000300: 5.159e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e-1

GenotypeQuality
all individuals: 2101
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 388
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GenotypeQuality
all individuals: 331
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14176
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.388915432393693e-4
allele num: 8372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.500600240096038e-4
allele num: 6664
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.37925291458482e-4
allele num: 8406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.621346125018738e-5
allele num: 53368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4326
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.896e0

VQSLOD
type: SiteQuality
SIO_000300: 8.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

QD
type: SiteQuality
SIO_000300: 1.212e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.89e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.66e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

DP
type: SiteQuality
SIO_000300: 1.16193e6

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 668
bin: 4.75e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 1.236093943139679e-4
allele num: 8090
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8156
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.561524047470331e-4
allele num: 6404
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.168458781362007e-5
allele num: 13950
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4168
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.85000385000385e-5
allele num: 51948
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

QD
type: SiteQuality
SIO_000300: 5.94e0

MQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.53e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.203e0

FS
type: SiteQuality
SIO_000300: 8.54e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

DP
type: SiteQuality
SIO_000300: 1.121491e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4114
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.232741617357002e-4
allele num: 8112
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7984
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.575299306868305e-4
allele num: 6348
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13858
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

QD
type: SiteQuality
SIO_000300: 9.34e0

FS
type: SiteQuality
SIO_000300: 4.09e0

VQSLOD
type: SiteQuality
SIO_000300: -1.18e-1

DP
type: SiteQuality
SIO_000300: 1.112093e6

MQRankSum
type: SiteQuality
SIO_000300: -1.092e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.133e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4082
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 684
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8030
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.962400408179285e-5
allele num: 50958
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6274
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.09767e6

VQSLOD
type: SiteQuality
SIO_000300: -1.864e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.493e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

QD
type: SiteQuality
SIO_000300: 7.4e0

FS
type: SiteQuality
SIO_000300: 9.129e0

MQ
type: SiteQuality
SIO_000300: 5.843e1

MQRankSum
type: SiteQuality
SIO_000300: -4.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.903e0

GenotypeQuality
all individuals: 603
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variant carriers: 0

GenotypeQuality
all individuals: 2514
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 633
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3762
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.363140676117775e-4
allele num: 7336
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7676
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.06e-1

MQ
type: SiteQuality
SIO_000300: 5.906e1

MQRankSum
type: SiteQuality
SIO_000300: -2.89e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.858e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.28e0

QD
type: SiteQuality
SIO_000300: 1.482e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

DP
type: SiteQuality
SIO_000300: 1.036172e6

GenotypeQuality
all individuals: 1574
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1547
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 500
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 125
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GenotypeQuality
all individuals: 438
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3288
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6300
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.844002372587489e-5
allele num: 43834
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5324
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12724
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.9e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.18e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.899999999999999e-1

DP
type: SiteQuality
SIO_000300: 9.45348e5

QD
type: SiteQuality
SIO_000300: 9.77e0

GenotypeQuality
all individuals: 2433
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 125
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.76009139375476e-5
allele num: 42016
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3114
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5128
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12454
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6002
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 564
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.212e0

MQRankSum
type: SiteQuality
SIO_000300: 1.56e0

VQSLOD
type: SiteQuality
SIO_000300: -2.709e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.2e-3

QD
type: SiteQuality
SIO_000300: 3.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.52e-1

FS
type: SiteQuality
SIO_000300: 7.496e0

DP
type: SiteQuality
SIO_000300: 9.15581e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 124
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6750
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3044
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.980982567353407e-4
allele num: 5048
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.33e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

DP
type: SiteQuality
SIO_000300: 9.08944e5

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.074e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.37e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 489
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 516
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5372
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12004
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2782
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.572810538231965e-5
allele num: 38868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4724
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.32e-1

DP
type: SiteQuality
SIO_000300: 8.70994e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.08e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.56e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 405
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2498
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.665001665001665e-4
allele num: 6006
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 494
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.233e1

MQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.29e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.15015e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.04e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.94e-1

GenotypeQuality
all individuals: 372
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5043
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 254
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9706
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33776
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2342
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 470
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.507522567703109e-4
allele num: 3988
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5754
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11340
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.95e-1

QD
type: SiteQuality
SIO_000300: 1.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.26e-2

DP
type: SiteQuality
SIO_000300: 7.88273e5

VQSLOD
type: SiteQuality
SIO_000300: -2.994e0

FS
type: SiteQuality
SIO_000300: 5.152e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.009e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.65e-1

GenotypeQuality
all individuals: 239
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1998
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1441
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5558
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.005763688760806e-5
allele num: 11104
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4066
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32086
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.532e0

QD
type: SiteQuality
SIO_000300: 5.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.45e-2

DP
type: SiteQuality
SIO_000300: 7.64566e5

VQSLOD
type: SiteQuality
SIO_000300: -2.539e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

MQRankSum
type: SiteQuality
SIO_000300: -1.186e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.749e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 210
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1469
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 379
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8768
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 801
bin: 1.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3858
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.851851851851852e-4
allele num: 5400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2076
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30812
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.65e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.64e0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: 4.13e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.134e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

DP
type: SiteQuality
SIO_000300: 7.47745e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

GenotypeQuality
all individuals: 1365
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2109
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33030
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1860
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variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 8.25e1
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GenotypeQuality
all individuals: 1419
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8153
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5232
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29582
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1942
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3562
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.326618168252192e-5
allele num: 10722
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.984e-1

QD
type: SiteQuality
SIO_000300: 7.76e0

MQRankSum
type: SiteQuality
SIO_000300: 7.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.41e-1

FS
type: SiteQuality
SIO_000300: 1.871e0

DP
type: SiteQuality
SIO_000300: 7.27775e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

GenotypeQuality
all individuals: 140
bin: 4.75e1
variant carriers: 6

GenotypeQuality
all individuals: 89
bin: 5.75e1
variant carriers: 11

GenotypeQuality
all individuals: 1720
bin: 1.75e1
variant carriers: 5

GenotypeQuality
all individuals: 448
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 8.75e1
variant carriers: 10

GenotypeQuality
all individuals: 242
bin: 8.25e1
variant carriers: 9

GenotypeQuality
all individuals: 7911
bin: 6.25e1
variant carriers: 5

GenotypeQuality
all individuals: 604
bin: 9.75e1
variant carriers: 218

GenotypeQuality
all individuals: 345
bin: 7.75e1
variant carriers: 6

GenotypeQuality
all individuals: 118
bin: 9.25e1
variant carriers: 9

GenotypeQuality
all individuals: 143
bin: 4.25e1
variant carriers: 5

African
type: Population
allele count: 181
allele frequency: 3.622898318654924e-2
allele num: 4996
num of homozygotes: 2

Other
type: Population
allele count: 1
allele frequency: 2.427184466019417e-3
allele num: 412
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.552923194497516e-5
allele num: 10468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.437297879985627e-4
allele num: 27830
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 9.322560596643878e-4
allele num: 3218
num of homozygotes: 0

East Asian
type: Population
allele count: 33
allele frequency: 1.09271523178808e-2
allele num: 3020
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1754
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.88e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.34e0

QD
type: SiteQuality
SIO_000300: 1.345e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 7.05766e5

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.67e-1

GenotypeQuality
all individuals: 1041
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10937
bin: 7.5e0
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GenotypeQuality
all individuals: 2008
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 897
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
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variant carriers: 0

GenotypeQuality
all individuals: 31978
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GenotypeQuality
all individuals: 399
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variant carriers: 6

GenotypeQuality
all individuals: 103
bin: 5.25e1
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GenotypeQuality
all individuals: 458
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variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 4.75e1
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GenotypeQuality
all individuals: 1321
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4754
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1674
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 4.84027105517909e-4
allele num: 10330
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3026
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.726893261776982e-5
allele num: 26832
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2890
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 388
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-2

DP
type: SiteQuality
SIO_000300: 6.93261e5

MQ
type: SiteQuality
SIO_000300: 5.967e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.652e0

MQRankSum
type: SiteQuality
SIO_000300: -4.66e-1

FS
type: SiteQuality
SIO_000300: 6.63e0

VQSLOD
type: SiteQuality
SIO_000300: -5.931e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 8.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.91e-1

GenotypeQuality
all individuals: 233
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 994
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 832
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 394
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variant carriers: 1

GenotypeQuality
all individuals: 110
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GenotypeQuality
all individuals: 51
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GenotypeQuality
all individuals: 115
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GenotypeQuality
all individuals: 7751
bin: 6.25e1
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GenotypeQuality
all individuals: 1478
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 3.348961821835231e-4
allele num: 2986
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 386
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2850
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26622
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.24e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.87192e5

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-1

FS
type: SiteQuality
SIO_000300: 6.929e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

QD
type: SiteQuality
SIO_000300: 3.22e0

VQSLOD
type: SiteQuality
SIO_000300: -2.464e0

GenotypeQuality
all individuals: 294
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1853
bin: 1.75e1
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GenotypeQuality
all individuals: 53
bin: 5.25e1
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GenotypeQuality
all individuals: 614
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GenotypeQuality
all individuals: 128
bin: 4.25e1
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GenotypeQuality
all individuals: 3458
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variant carriers: 0

GenotypeQuality
all individuals: 61
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GenotypeQuality
all individuals: 226
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GenotypeQuality
all individuals: 915
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 348
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 656
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 962
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 228
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.29e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.369999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.81e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

DP
type: SiteQuality
SIO_000300: 4.63071e5

VQSLOD
type: SiteQuality
SIO_000300: -1.522e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.652e0

GenotypeQuality
all individuals: 376
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7169
bin: 2.25e1
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GenotypeQuality
all individuals: 1703
bin: 1.75e1
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GenotypeQuality
all individuals: 393
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GenotypeQuality
all individuals: 604
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GenotypeQuality
all individuals: 112
bin: 8.75e1
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GenotypeQuality
all individuals: 913
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 962
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 350
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2766
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 228
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.61787e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.86e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.46e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.686e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.031e1

QD
type: SiteQuality
SIO_000300: 1.068e1

GenotypeQuality
all individuals: 702
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 18395
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 673
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1959
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20244
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.175805047867711e-4
allele num: 4596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 96
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.127659574468085e-3
allele num: 470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 242
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 8.726003490401396e-4
allele num: 1146
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 7.32e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

MQRankSum
type: SiteQuality
SIO_000300: 1.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.45e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.034e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.32e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.959e0

DP
type: SiteQuality
SIO_000300: 4.43584e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

GenotypeQuality
all individuals: 1720
bin: 2.25e1
variant carriers: 123

GenotypeQuality
all individuals: 392
bin: 4.75e1
variant carriers: 65

GenotypeQuality
all individuals: 1959
bin: 1.75e1
variant carriers: 117

GenotypeQuality
all individuals: 18395
bin: 7.5e0
variant carriers: 143

GenotypeQuality
all individuals: 673
bin: 2.75e1
variant carriers: 117

GenotypeQuality
all individuals: 197
bin: 5.75e1
variant carriers: 34

GenotypeQuality
all individuals: 396
bin: 4.25e1
variant carriers: 88

GenotypeQuality
all individuals: 49
bin: 9.25e1
variant carriers: 8

GenotypeQuality
all individuals: 166
bin: 9.75e1
variant carriers: 33

GenotypeQuality
all individuals: 569
bin: 3.75e1
variant carriers: 85

Latino
type: Population
allele count: 22
allele frequency: 9.090909090909091e-2
allele num: 242
num of homozygotes: 0

South Asian
type: Population
allele count: 520
allele frequency: 1.13141862489121e-1
allele num: 4596
num of homozygotes: 0

Other
type: Population
allele count: 7
allele frequency: 7.291666666666667e-2
allele num: 96
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 5.76923076923077e-2
allele num: 52
num of homozygotes: 0

East Asian
type: Population
allele count: 15
allele frequency: 3.191489361702127e-2
allele num: 470
num of homozygotes: 0

African
type: Population
allele count: 55
allele frequency: 4.799301919720768e-2
allele num: 1146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 221
allele frequency: 4.750644883920895e-2
allele num: 4652
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.32e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

DP
type: SiteQuality
SIO_000300: 4.43584e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.959e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.45e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.034e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

QD
type: SiteQuality
SIO_000300: 5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.32e-2

GenotypeQuality
all individuals: 289
bin: 5.25e1
variant carriers: 105

GenotypeQuality
all individuals: 3003
bin: 1.25e1
variant carriers: 112

GenotypeQuality
all individuals: 16262
bin: 7.5e0
variant carriers: 129

GenotypeQuality
all individuals: 356
bin: 4.75e1
variant carriers: 143

GenotypeQuality
all individuals: 22806
bin: 2.5e0
variant carriers: 106

GenotypeQuality
all individuals: 545
bin: 9.75e1
variant carriers: 357

GenotypeQuality
all individuals: 456
bin: 3.75e1
variant carriers: 153

GenotypeQuality
all individuals: 110
bin: 8.25e1
variant carriers: 59

GenotypeQuality
all individuals: 232
bin: 6.75e1
variant carriers: 111

GenotypeQuality
all individuals: 112
bin: 8.75e1
variant carriers: 59

African
type: Population
allele count: 130
allele frequency: 1.348547717842324e-1
allele num: 964
num of homozygotes: 0

East Asian
type: Population
allele count: 76
allele frequency: 1.853658536585366e-1
allele num: 410
num of homozygotes: 0

Other
type: Population
allele count: 16
allele frequency: 1.26984126984127e-1
allele num: 126
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 7.407407407407407e-2
allele num: 54
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 896
allele frequency: 2.147651006711409e-1
allele num: 4172
num of homozygotes: 0

South Asian
type: Population
allele count: 575
allele frequency: 1.365147198480532e-1
allele num: 4212
num of homozygotes: 0

Latino
type: Population
allele count: 26
allele frequency: 1.140350877192982e-1
allele num: 228
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.951e1

VQSLOD
type: SiteQuality
SIO_000300: 2.78e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.345e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-1

QD
type: SiteQuality
SIO_000300: 1.61e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.19091e5