15-83013419-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83013419
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83013419
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 2
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.1164C>T
  hgvsp: ENST00000557886.1:c.1164C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 2.5e0
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 7.5e0
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp388Asp
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

15-83013544-TCTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83013544
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83013541
    reference: chr 15
allele count: 10
allele frequency: 1.226692836113837e-3
allele num: 8152
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.1036_1038delGAG
  hgvsp: ENSP00000452844.1:p.Glu346del
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14514
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3038
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1018
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14419
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu346del
num of homozygotes: 5
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 802
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 296
  num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: TCTC
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ

15-83013563-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83013563
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83013563
    reference: chr 15
allele count: 3
allele frequency: 3.372302158273381e-4
allele num: 8896
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.1020G>A
  hgvsp: ENST00000557886.1:c.1020G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19999
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3856
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19926
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3331
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3742
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg340Arg
num of homozygotes: 1
population: African
  type: Population
  allele count: 2
  allele frequency: 5.952380952380952e-3
  allele num: 336
  num of homozygotes: 1
population: Latino
  type: Population
  allele count: 1
  allele frequency: 6.172839506172839e-3
  allele num: 162
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

15-83013581-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83013581
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83013581
    reference: chr 15
allele count: 213
allele frequency: 2.336551118911804e-2
allele num: 9116
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.1002G>A
  hgvsp: ENST00000557886.1:c.1002G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3700
  bin: 2.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4079
  bin: 7.5e0
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 19502
  bin: 2.5e0
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 3279
  bin: 6.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 6.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3944
  bin: 2.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 7.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 19441
  bin: 7.5e0
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 9.75e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 9
hgvs: p.Leu334Leu
num of homozygotes: 79
population: Other
  type: Population
  allele count: 2
  allele frequency: 1.818181818181818e-2
  allele num: 110
  num of homozygotes: 1
population: Latino
  type: Population
  allele count: 7
  allele frequency: 4.069767441860465e-2
  allele num: 172
  num of homozygotes: 2
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

15-83013622-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83013622
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83013622
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 5682
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.961T>C
  hgvsp: ENSP00000452844.1:p.Cys321Arg
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3919
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1521
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Cys321Arg
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 120
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 68
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum

15-83013623-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83013623
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83013623
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 4074
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.960G>A
  hgvsp: ENST00000557886.1:c.960G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3674
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu320Leu
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2362
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 112
  num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

15-83013628-TCTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83013628
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83013625
    reference: chr 15
allele count: 1
allele frequency: 9.940357852882703e-4
allele num: 1006
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.952_954delGAG
  hgvsp: ENSP00000452844.1:p.Glu318del
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2035
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Glu318del
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 562
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: TCTC
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum

15-83013937-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83013937
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83013938
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 2
alternate allele: GT
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.645dupA
  hgvsp: ENSP00000452844.1:p.His216ThrfsTer2
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2897
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2488
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
hgvs: p.His216ThrfsTer2
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/15-83013939-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83013939
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83013939
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 12
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.644T>G
  hgvsp: ENSP00000452844.1:p.Leu215Arg
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3160
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2720
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Leu215Arg
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

15-83013945-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83013945
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83013945
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 16
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.638A>G
  hgvsp: ENSP00000452844.1:p.Glu213Gly
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4030
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3577
  bin: 7.5e0
  variant carriers: 2
hgvs: p.Glu213Gly
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

15-83013957-T-TGTAGCCTCTCCTCCTGTTCAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83013957
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83013978
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 4
alternate allele: TGTAGCCTCTCCTCCTGTTCAC
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsp: ENSP00000452844.1:p.Arg202_Leu208dup
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3883
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2832
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1540
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg202_Leu208dup
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

15-83014000-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014000
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014000
    reference: chr 15
allele count: 58
allele frequency: 2.735849056603774e-1
allele num: 212
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.583A>G
  hgvsp: ENSP00000452844.1:p.Arg195Gly
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7461
  bin: 2.5e0
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 7.5e0
  variant carriers: 119
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6659
  bin: 7.5e0
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 1.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 2.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 1.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 6.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 9.75e1
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 11
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  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 8.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 15
hgvs: p.Arg195Gly
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 5
  allele frequency: 2.5e-1
  allele num: 20
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 2
  allele frequency: 3.333333333333333e-1
  allele num: 6
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/15-83014016-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014016
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014016
    reference: chr 15
allele count: 4
allele frequency: 1.234567901234568e-2
allele num: 324
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.567G>T
  hgvsp: ENSP00000452844.1:p.Met189Ile
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8452
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
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genotype quality: GenotypeQuality
  all individuals: 35
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 243
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 4
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 1
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genotype quality: GenotypeQuality
  all individuals: 1
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genotype quality: GenotypeQuality
  all individuals: 761
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genotype quality: GenotypeQuality
  all individuals: 276
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 41
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genotype quality: GenotypeQuality
  all individuals: 31
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genotype quality: GenotypeQuality
  all individuals: 7724
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3
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  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3
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genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Met189Ile
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 6.41025641025641e-3
  allele num: 156
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6
  num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

15-83014024-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014024
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014024
    reference: chr 15
allele count: 9
allele frequency: 1.890756302521008e-2
allele num: 476
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.559A>G
  hgvsp: ENSP00000452844.1:p.Asn187Asp
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 8780
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7974
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1731
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.25e1
  variant carriers: 3
hgvs: p.Asn187Asp
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 16
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-83014061-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014061
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014061
    reference: chr 15
allele count: 8
allele frequency: 5.420054200542005e-3
allele num: 1476
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.522G>A
  hgvsp: ENST00000557886.1:c.522G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 13457
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3679
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12446
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3120
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1015
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 28
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 355
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 8
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 226
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genotype quality: GenotypeQuality
  all individuals: 92
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genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu174Glu
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 20
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 48
  num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

15-83014067-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014067
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014067
    reference: chr 15
allele count: 1
allele frequency: 5.924170616113745e-4
allele num: 1688
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.516G>C
  hgvsp: ENSP00000452844.1:p.Glu172Asp
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3757
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14591
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 328
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3215
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 2
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genotype quality: GenotypeQuality
  all individuals: 398
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
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  variant carriers: 0
hgvs: p.Glu172Asp
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 84
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 50
  num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

15-83014083-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014083
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014083
    reference: chr 15
allele count: 59
allele frequency: 2.267486548808609e-2
allele num: 2602
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.500A>G
  hgvsp: ENSP00000452844.1:p.Asn167Ser
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 1.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3745
  bin: 7.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 15935
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  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1851
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14344
  bin: 7.5e0
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2862
  bin: 2.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 80
  bin: 6.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 29
  bin: 9.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 8.25e1
  variant carriers: 7
hgvs: p.Asn167Ser
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 38
  allele frequency: 7.509881422924901e-2
  allele num: 506
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 144
  num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum

15-83014094-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014094
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014094
    reference: chr 15
allele count: 2
allele frequency: 5.063291139240507e-4
allele num: 3950
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.489A>G
  hgvsp: ENST00000557886.1:c.489A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19098
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 3348
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 18
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 17811
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1100
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1252
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln163Gln
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 262
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.461988304093567e-3
  allele num: 684
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

15-83014106-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014106
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014106
    reference: chr 15
allele count: 2354
allele frequency: 3.174217907227616e-1
allele num: 7416
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.477A>G
  hgvsp: ENST00000557886.1:c.477A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 1.75e1
  variant carriers: 341
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 6182
  bin: 7.5e0
  variant carriers: 2243
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.25e1
  variant carriers: 108
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 1.25e1
  variant carriers: 485
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 2.25e1
  variant carriers: 369
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 2.75e1
  variant carriers: 308
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 3.25e1
  variant carriers: 183
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 3.75e1
  variant carriers: 132
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 14647
  bin: 2.5e0
  variant carriers: 3092
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 4.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 5.25e1
  variant carriers: 172
genotype quality: GenotypeQuality
  all individuals: 1243
  bin: 2.25e1
  variant carriers: 367
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 7.25e1
  variant carriers: 204
genotype quality: GenotypeQuality
  all individuals: 9915
  bin: 7.5e0
  variant carriers: 1973
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 4.75e1
  variant carriers: 167
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 4.25e1
  variant carriers: 159
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 8.25e1
  variant carriers: 108
genotype quality: GenotypeQuality
  all individuals: 1037
  bin: 6.25e1
  variant carriers: 102
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 3.25e1
  variant carriers: 367
genotype quality: GenotypeQuality
  all individuals: 7950
  bin: 2.5e0
  variant carriers: 107
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 6.75e1
  variant carriers: 190
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 3.75e1
  variant carriers: 193
genotype quality: GenotypeQuality
  all individuals: 1282
  bin: 1.25e1
  variant carriers: 1119
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 2.75e1
  variant carriers: 233
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 1.75e1
  variant carriers: 738
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 8.75e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 7.75e1
  variant carriers: 157
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 9.75e1
  variant carriers: 845
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 5.75e1
  variant carriers: 194
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 9.25e1
  variant carriers: 51
hgvs: p.Val159Val
num of homozygotes: 336
population: African
  type: Population
  allele count: 146
  allele frequency: 4.67948717948718e-1
  allele num: 312
  num of homozygotes: 27
population: Other
  type: Population
  allele count: 43
  allele frequency: 4.3e-1
  allele num: 100
  num of homozygotes: 8
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

15-83014108-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014108
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014108
    reference: chr 15
allele count: 13
allele frequency: 1.306795335745879e-3
allele num: 9948
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.475G>A
  hgvsp: ENSP00000452844.1:p.Val159Ile
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4919
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22497
  bin: 2.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1893
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1826
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20285
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2457
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1644
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1431
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 9.25e1
  variant carriers: 1
hgvs: p.Val159Ile
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 6
  allele frequency: 1.949317738791423e-3
  allele num: 3078
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 366
  num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

15-83014112-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014112
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014112
    reference: chr 15
allele count: 53
allele frequency: 5.511647254575707e-3
allele num: 9616
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.471T>A
  hgvsp: ENST00000557886.1:c.471T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 1.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4889
  bin: 7.5e0
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 22861
  bin: 2.5e0
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1320
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2541
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 20341
  bin: 7.5e0
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 9.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 1713
  bin: 1.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 4.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1843
  bin: 6.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 7.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2292
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 3.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 7.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser157Ser
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 226
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 22
  allele frequency: 2.272727272727273e-2
  allele num: 968
  num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ

15-83014113-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014113
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014113
    reference: chr 15
allele count: 6
allele frequency: 5.980861244019139e-4
allele num: 10032
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.470C>T
  hgvsp: ENSP00000452844.1:p.Ser157Phe
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4758
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 23644
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1925
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21652
  bin: 7.5e0
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2755
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1437
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1837
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser157Phe
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 366
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4616
  num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

15-83014115-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014115
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014115
    reference: chr 15
allele count: 4
allele frequency: 3.999200159968006e-4
allele num: 10002
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.468A>T
  hgvsp: ENST00000557886.1:c.468A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 4782
  bin: 7.5e0
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23690
  bin: 2.5e0
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2679
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1400
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1872
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21323
  bin: 7.5e0
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1846
  bin: 1.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1489
  bin: 1.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 1
hgvs: p.Pro156Pro
num of homozygotes: 1
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 364
  num of homozygotes: 0
population: African
  type: Population
  allele count: 2
  allele frequency: 4.5662100456621e-3
  allele num: 438
  num of homozygotes: 1
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD

15-83014122-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014122
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014122
    reference: chr 15
allele count: 3
allele frequency: 2.982700338039372e-4
allele num: 10058
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.461C>G
  hgvsp: ENSP00000452844.1:p.Ala154Gly
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4907
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24414
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1805
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1503
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1851
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1813
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21697
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2796
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala154Gly
num of homozygotes: 1
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 364
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1070
  num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP

15-83014122-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014122
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014122
    reference: chr 15
allele count: 6
allele frequency: 5.965400676078744e-4
allele num: 10058
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.461C>A
  hgvsp: ENSP00000452844.1:p.Ala154Glu
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24414
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4907
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1503
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2796
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1805
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21697
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1851
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1813
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 9.75e1
  variant carriers: 5
hgvs: p.Ala154Glu
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 240
  num of homozygotes: 0
population: African
  type: Population
  allele count: 6
  allele frequency: 1.339285714285714e-2
  allele num: 448
  num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP

15-83014132-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014132
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014132
    reference: chr 15
allele count: 823
allele frequency: 9.247191011235956e-2
allele num: 8900
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.451G>C
  hgvsp: ENSP00000452844.1:p.Glu151Gln
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 1.25e1
  variant carriers: 220
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 3.25e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 2.75e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 1.75e1
  variant carriers: 159
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 22264
  bin: 2.5e0
  variant carriers: 138
genotype depth: GenotypeDepth
  all individuals: 5920
  bin: 7.5e0
  variant carriers: 354
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 3.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 2.25e1
  variant carriers: 143
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 7.25e1
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 4.25e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 7.75e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 8.75e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 985
  bin: 1.75e1
  variant carriers: 51
genotype quality: GenotypeQuality
  all individuals: 16294
  bin: 7.5e0
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 4.75e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 3.25e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 9.25e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 8.25e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 1074
  bin: 1.25e1
  variant carriers: 62
genotype quality: GenotypeQuality
  all individuals: 9237
  bin: 2.5e0
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 1453
  bin: 6.25e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 9.75e1
  variant carriers: 389
genotype quality: GenotypeQuality
  all individuals: 1833
  bin: 2.25e1
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 3.75e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 5.25e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.75e1
  variant carriers: 65
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 2.75e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 6.75e1
  variant carriers: 57
hgvs: p.Glu151Gln
num of homozygotes: 1
population: European (Finnish)
  type: Population
  allele count: 145
  allele frequency: 1.997245179063361e-1
  allele num: 726
  num of homozygotes: 0
population: African
  type: Population
  allele count: 76
  allele frequency: 1.60337552742616e-1
  allele num: 474
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

15-83014145-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014145
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014145
    reference: chr 15
allele count: 1
allele frequency: 8.387854386847844e-5
allele num: 11922
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.438A>T
  hgvsp: ENSP00000452844.1:p.Glu146Asp
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29346
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7477
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28285
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2806
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Glu146Asp
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4180
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1248
  num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD

15-83014170-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014170
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014170
    reference: chr 15
allele count: 8
allele frequency: 7.182618064284432e-4
allele num: 11138
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.434-21A>T
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9785
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2705
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1744
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5111
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8168
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21539
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2020
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 1
  allele frequency: 8.19672131147541e-3
  allele num: 122
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 402
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4382
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
reference allele: T
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

15-83014175-GCCT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014175
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014172
    reference: chr 15
allele count: 1
allele frequency: 7.387706855791962e-5
allele num: 13536
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.434-29_434-27delAGG
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9680
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1066
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1493
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 2347
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2738
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1147
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 89
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 156
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 812
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 348
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: GCCT
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

15-83014186-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014186
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014186
    reference: chr 15
allele count: 44
allele frequency: 3.535840565734491e-3
allele num: 12444
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.434-37G>A
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 25320
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 1.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 655
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  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10136
  bin: 7.5e0
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5626
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2682
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 21523
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4995
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2477
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 178
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 842
  bin: 3.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1004
  bin: 2.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 320
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  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 503
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genotype quality: GenotypeQuality
  all individuals: 775
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 250
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genotype quality: GenotypeQuality
  all individuals: 104
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genotype quality: GenotypeQuality
  all individuals: 187
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  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 245
  bin: 4.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 9.25e1
  variant carriers: 2
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 406
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 336
  num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 1.237623762376238e-3
  allele num: 808
  num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

15-83014187-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014187
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014187
    reference: chr 15
allele count: 1
allele frequency: 7.757951900698215e-5
allele num: 12890
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.434-38A>G
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1138
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2566
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 907
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5074
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 808
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4708
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/15-83014188-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014188
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014188
    reference: chr 15
allele count: 10
allele frequency: 1.360914534567229e-3
allele num: 7348
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.434-39G>T
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10754
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 22497
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19227
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1063
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1478
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2023
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13654
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 1
  allele frequency: 1.063829787234043e-2
  allele num: 94
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 3.246753246753247e-4
  allele num: 3080
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 1
  allele frequency: 4.629629629629629e-3
  allele num: 216
  num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/15-83014188-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014188
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014187
    reference: chr 15
allele count: 65
allele frequency: 8.845944474686989e-3
allele num: 7348
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.434-40delT
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 2.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10754
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22497
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 19227
  bin: 2.5e0
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 1478
  bin: 1.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 2.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 13654
  bin: 7.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1063
  bin: 1.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 4.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2023
  bin: 2.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 3.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 254
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genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.75e1
  variant carriers: 10
num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 1.798561151079137e-3
  allele num: 556
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 17
  allele frequency: 5.51948051948052e-3
  allele num: 3080
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 1
  allele frequency: 4.629629629629629e-3
  allele num: 216
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: CA
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/15-83014188-CAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014188
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014186
    reference: chr 15
allele count: 2250
allele frequency: 3.062057702776266e-1
allele num: 7348
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.434-41_434-40delTT
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 1.25e1
  variant carriers: 428
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 1.75e1
  variant carriers: 532
genotype depth: GenotypeDepth
  all individuals: 22497
  bin: 2.5e0
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 2.25e1
  variant carriers: 474
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 2.75e1
  variant carriers: 315
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 3.75e1
  variant carriers: 123
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 10754
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  variant carriers: 507
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 3.25e1
  variant carriers: 211
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.25e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 2023
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 335
  bin: 2.75e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 5.75e1
  variant carriers: 126
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.75e1
  variant carriers: 72
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.75e1
  variant carriers: 109
genotype quality: GenotypeQuality
  all individuals: 19227
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genotype quality: GenotypeQuality
  all individuals: 257
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  variant carriers: 117
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 8.25e1
  variant carriers: 233
genotype quality: GenotypeQuality
  all individuals: 13654
  bin: 7.5e0
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 1063
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 213
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genotype quality: GenotypeQuality
  all individuals: 1478
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 244
  bin: 5.25e1
  variant carriers: 195
genotype quality: GenotypeQuality
  all individuals: 164
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 251
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genotype quality: GenotypeQuality
  all individuals: 93
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genotype quality: GenotypeQuality
  all individuals: 227
  bin: 8.75e1
  variant carriers: 210
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 975
  bin: 9.75e1
  variant carriers: 907
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 849
  allele frequency: 2.756493506493506e-1
  allele num: 3080
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 42
  allele frequency: 1.944444444444444e-1
  allele num: 216
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 174
  allele frequency: 2.423398328690808e-1
  allele num: 718
  num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
reference allele: CAA
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/15-83014188-CAAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014188
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014185
    reference: chr 15
allele count: 23
allele frequency: 3.130103429504627e-3
allele num: 7348
alternate allele: C
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10754
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
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  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 22497
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
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genotype depth: GenotypeDepth
  all individuals: 20
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genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 328
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 26
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
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genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 199
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1063
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 251
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genotype quality: GenotypeQuality
  all individuals: 1478
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 244
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 13654
  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 257
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 190
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genotype quality: GenotypeQuality
  all individuals: 975
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 227
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genotype quality: GenotypeQuality
  all individuals: 164
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 213
  bin: 7.75e1
  variant carriers: 2
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 216
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 12
  allele frequency: 3.896103896103896e-3
  allele num: 3080
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 718
  num of homozygotes: 0
population: African
  type: Population
  allele count: 2
  allele frequency: 3.597122302158274e-3
  allele num: 556
  num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
reference allele: CAAA
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS

http://identifiers.org/exac.variant/15-83014195-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014195
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014195
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 19656
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.434-46T>G
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26813
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 1004
  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6615
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 1399
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1225
  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7110
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1124
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 498
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

15-83014622-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014622
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014622
    reference: chr 15
allele count: 0
allele frequency: NaN
allele num: 0
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.346-3C>T
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 1
hgvs: c.346-3C>T
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-83014646-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83014646
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83014646
    reference: chr 15
allele count: 0
allele frequency: NaN
allele num: 0
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.346-27G>A
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
reference allele: C
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/15-83015283-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83015283
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83015283
    reference: chr 15
allele count: 5
allele frequency: 8.928571428571429e-2
allele num: 56
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.345+1G>T
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
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genotype depth: GenotypeDepth
  all individuals: 9
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.345+1G>T
num of homozygotes: 2
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: African
  type: Population
  allele count: 5
  allele frequency: 3.125e-1
  allele num: 16
  num of homozygotes: 2
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

15-83015396-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83015396
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83015396
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 98
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.265-32C>T
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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genotype depth: GenotypeDepth
  all individuals: 23
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 396
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2104
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 48
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP

15-83015407-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83015407
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83015407
    reference: chr 15
allele count: 0
allele frequency: 0.0e0
allele num: 138
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.265-43C>G
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2445
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 40
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8
  num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

15-83015569-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83015569
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83015569
    reference: chr 15
allele count: 1
allele frequency: 8.378016085790885e-5
allele num: 11936
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.245C>T
  hgvsp: ENSP00000452844.1:p.Thr82Ile
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15890
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13627
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15811
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13511
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4951
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr82Ile
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 138
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4158
  num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

15-83015570-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83015570
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83015570
    reference: chr 15
allele count: 1
allele frequency: 8.289124668435013e-5
allele num: 12064
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.244A>G
  hgvsp: ENSP00000452844.1:p.Thr82Ala
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15750
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4995
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13719
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15660
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4982
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 14
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 13577
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Thr82Ala
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 864
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 138
  num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-83015581-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83015581
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83015581
    reference: chr 15
allele count: 3
allele frequency: 2.266545784224841e-4
allele num: 13236
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.233G>A
  hgvsp: ENSP00000452844.1:p.Arg78His
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5246
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14652
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14480
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5322
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 130
  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14700
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14437
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 217
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg78His
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5156
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 926
  num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

15-83015582-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83015582
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83015582
    reference: chr 15
allele count: 4
allele frequency: 2.986857825567503e-4
allele num: 13392
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.232C>T
  hgvsp: ENSP00000452844.1:p.Arg78Cys
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5279
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14737
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14357
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5383
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14321
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14823
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg78Cys
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 926
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4872
  num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

15-83015582-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83015582
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83015582
    reference: chr 15
allele count: 5
allele frequency: 3.733572281959379e-4
allele num: 13392
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.232C>G
  hgvsp: ENSP00000452844.1:p.Arg78Gly
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14357
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5279
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14737
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14321
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14823
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5383
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 8.75e1
  variant carriers: 1
hgvs: p.Arg78Gly
num of homozygotes: 1
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 926
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5176
  num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/15-83015599-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83015599
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83015599
    reference: chr 15
allele count: 1
allele frequency: 6.792555359326178e-5
allele num: 14722
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.215G>T
  hgvsp: ENSP00000452844.1:p.Gly72Val
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 14593
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13826
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14971
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14444
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 5415
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly72Val
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 566
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 816
  num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

15-83015615-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83015615
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83015615
    reference: chr 15
allele count: 2
allele frequency: 1.574307304785894e-4
allele num: 12704
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.205-6T>C
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7711
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17459
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 19759
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7723
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2979
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
hgvs: c.205-6T>C
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 136
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 886
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

15-83015650-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83015650
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83015650
    reference: chr 15
allele count: 1
allele frequency: 3.523608174770966e-4
allele num: 2838
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.205-41G>A
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7984
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1154
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7705
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 125
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1208
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 236
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 28
  num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

15-83015655-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83015655
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83015655
    reference: chr 15
allele count: 2
allele frequency: 1.285347043701799e-3
allele num: 1556
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000259243
  ensembl protein: ENSP00000452844
  ensembl transcript: ENST00000557886
  gene symbol: GOLGA6L19
  hgvsc: ENST00000557886.1:c.205-46G>A
  variant of: http://identifiers.org/hgnc/49416
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4
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  variant carriers: 0
num of homozygotes: 1
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 100
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 192
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 466
  num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD

15-83193273-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83193273
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83193273
    reference: chr 15
allele count: 0
allele frequency: NaN
allele num: 0
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254374
  ensembl transcript: ENST00000558310
  gene symbol: GOLGA6L21P
  hgvsc: ENST00000558310.1:n.80T>C
  variant of: http://identifiers.org/hgnc/49417
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254374
  ensembl transcript: ENST00000512735
  gene symbol: GOLGA6L21P
  hgvsc: ENST00000512735.2:n.1111T>C
  variant of: http://identifiers.org/hgnc/49417
canonical: true
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

15-83193312-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83193312
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83193312
    reference: chr 15
allele count: 0
allele frequency: NaN
allele num: 0
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254374
  ensembl transcript: ENST00000512735
  gene symbol: GOLGA6L21P
  hgvsc: ENST00000512735.2:n.1150G>A
  variant of: http://identifiers.org/hgnc/49417
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254374
  ensembl transcript: ENST00000558310
  gene symbol: GOLGA6L21P
  hgvsc: ENST00000558310.1:n.119G>A
  variant of: http://identifiers.org/hgnc/49417
canonical: true
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

15-83193313-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83193313
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83193313
    reference: chr 15
allele count: 0
allele frequency: NaN
allele num: 0
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254374
  ensembl transcript: ENST00000558310
  gene symbol: GOLGA6L21P
  hgvsc: ENST00000558310.1:n.120A>G
  variant of: http://identifiers.org/hgnc/49417
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000254374
  ensembl transcript: ENST00000512735
  gene symbol: GOLGA6L21P
  hgvsc: ENST00000512735.2:n.1151A>G
  variant of: http://identifiers.org/hgnc/49417
canonical: true
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: QD

15-83215149-ATTT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215149
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215146
    reference: chr 15
allele count: 6
allele frequency: 4.986287708800798e-5
allele num: 120330
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1365+39_1365+41delAAA
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.897+39_897+41delAAA
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1584+39_1584+41delAAA
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1350+39_1350+41delAAA
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1575+39_1575+41delAAA
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1350+39_1350+41delAAA
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1383+39_1383+41delAAA
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1656+39_1656+41delAAA
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.779+39_779+41delAAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1350+39_1350+41delAAA
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2254_38-2252delTTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1590+39_1590+41delAAA
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*706+39_*706+41delAAA
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1350+39_1350+41delAAA
  variant of: http://identifiers.org/hgnc/21744
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3364
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6081
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: ATTT
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

15-83215163-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215163
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215163
    reference: chr 15
allele count: 2217
allele frequency: 1.84151507600299e-2
allele num: 120390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1656+28C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1383+28C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1584+28C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*706+28C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1350+28C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1365+28C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.779+28C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2243G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1590+28C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1350+28C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1350+28C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1350+28C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1575+28C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.897+28C>T
  variant of: http://identifiers.org/hgnc/21744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 4.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 4.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 6.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 3.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 8.25e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 5767
  bin: 3.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 4053
  bin: 2.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2343
  bin: 6.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 1.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 7.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 8.75e1
  variant carriers: 84
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 7.75e1
  variant carriers: 60
genotype quality: GenotypeQuality
num of homozygotes: 24
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

15-83215165-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215165
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215165
    reference: chr 15
allele count: 1
allele frequency: 8.304268393954492e-6
allele num: 120420
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1584+26T>C
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2241A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1350+26T>C
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1350+26T>C
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1590+26T>C
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*706+26T>C
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.897+26T>C
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1656+26T>C
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.779+26T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1575+26T>C
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1383+26T>C
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1350+26T>C
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1365+26T>C
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1350+26T>C
  variant of: http://identifiers.org/hgnc/21744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13673
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6100
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6765
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum

http://identifiers.org/exac.variant/15-83215169-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215169
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215169
    reference: chr 15
allele count: 1
allele frequency: 8.300683976359652e-6
allele num: 120472
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2237A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1365+22T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1575+22T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1584+22T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1383+22T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1350+22T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1656+22T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*706+22T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.779+22T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1590+22T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1350+22T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1350+22T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.897+22T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1350+22T>G
  variant of: http://identifiers.org/hgnc/21744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

15-83215171-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215171
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215171
    reference: chr 15
allele count: 1
allele frequency: 8.298617450332775e-6
allele num: 120502
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1350+20A>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1590+20A>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1383+20A>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1365+20A>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1575+20A>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2235T>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*706+20A>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1656+20A>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1350+20A>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.779+20A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1584+20A>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1350+20A>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.897+20A>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1350+20A>T
  variant of: http://identifiers.org/hgnc/21744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3566
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6159
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13674
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

15-83215175-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215175
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215175
    reference: chr 15
allele count: 3
allele frequency: 2.488800398208064e-5
allele num: 120540
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1365+16A>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1350+16A>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1584+16A>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.779+16A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.897+16A>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2231T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1350+16A>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1383+16A>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1575+16A>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1590+16A>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1350+16A>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1656+16A>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1350+16A>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*706+16A>G
  variant of: http://identifiers.org/hgnc/21744
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6187
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2646
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13673
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6897
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

http://identifiers.org/exac.variant/15-83215176-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215176
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215176
    reference: chr 15
allele count: 1
allele frequency: 8.29531314807134e-6
allele num: 120550
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1383+15T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.779+15T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1584+15T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1590+15T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1575+15T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1350+15T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1350+15T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1350+15T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.897+15T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*706+15T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1656+15T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1365+15T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1350+15T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2230A>C
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3571
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2646
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

15-83215182-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215182
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215182
    reference: chr 15
allele count: 2
allele frequency: 1.65873239670244e-5
allele num: 120574
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.897+9G>A
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1350+9G>A
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1350+9G>A
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1365+9G>A
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*706+9G>A
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1590+9G>A
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1350+9G>A
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.779+9G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1575+9G>A
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1383+9G>A
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1350+9G>A
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1656+9G>A
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1584+9G>A
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2224C>T
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4411
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6966
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2646
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

15-83215183-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215183
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215183
    reference: chr 15
allele count: 8
allele frequency: 6.633609180915106e-5
allele num: 120598
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.897+8C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1350+8C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1584+8C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.779+8C>T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1350+8C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1350+8C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2223G>A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*706+8C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1383+8C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1365+8C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1590+8C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1656+8C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1350+8C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1575+8C>T
  variant of: http://identifiers.org/hgnc/21744
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2320
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6977
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1575+8C>T
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP

15-83215194-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215194
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215194
    reference: chr 15
allele count: 1
allele frequency: 8.288300235387727e-6
allele num: 120652
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1347T>C
  hgvsp: ENST00000450751.2:c.1347T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1572T>C
  hgvsp: ENST00000568128.1:c.1572T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1581T>C
  hgvsp: ENST00000261723.6:c.1581T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1347T>C
  hgvsp: ENST00000564522.1:c.1347T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2212A>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1347T>C
  hgvsp: ENST00000423133.2:c.1347T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1347T>C
  hgvsp: ENST00000568757.1:c.1347T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1653T>C
  hgvsp: ENST00000563800.1:c.1653T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1587T>C
  hgvsp: ENST00000562019.1:c.1587T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.776T>C
  hgvsp: ENST00000562833.1:c.776T>C(p.%3D)
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.894T>C
  hgvsp: ENST00000398592.2:c.894T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1380T>C
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1362T>C
  hgvsp: ENST00000398591.2:c.1362T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*703T>C
  variant of: http://identifiers.org/hgnc/21744
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13672
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3592
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4439
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp524Asp
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

15-83215195-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215195
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215195
    reference: chr 15
allele count: 1
allele frequency: 8.287888080359362e-6
allele num: 120658
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1346A>G
  hgvsp: ENSP00000414187.2:p.Asp449Gly
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1652A>G
  hgvsp: ENSP00000457556.1:p.Asp551Gly
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*702A>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1580A>G
  hgvsp: ENSP00000261723.6:p.Asp527Gly
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1361A>G
  hgvsp: ENSP00000381591.2:p.Asp454Gly
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.893A>G
  hgvsp: ENSP00000381592.2:p.Asp298Gly
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2211T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1346A>G
  hgvsp: ENSP00000458081.1:p.Asp449Gly
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1571A>G
  hgvsp: ENSP00000457881.1:p.Asp524Gly
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1346A>G
  hgvsp: ENSP00000397526.2:p.Asp449Gly
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.775A>G
  hgvsp: ENSP00000454786.1:p.Asp259Gly
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1379A>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1346A>G
  hgvsp: ENSP00000457364.1:p.Asp449Gly
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1586A>G
  hgvsp: ENSP00000457836.1:p.Asp529Gly
  variant of: http://identifiers.org/hgnc/21744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3592
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4439
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13673
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp524Gly
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

15-83215197-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215197
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215197
    reference: chr 15
allele count: 1
allele frequency: 8.286789200656313e-6
allele num: 120674
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1344A>C
  hgvsp: ENST00000564522.1:c.1344A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1344A>C
  hgvsp: ENST00000568757.1:c.1344A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1569A>C
  hgvsp: ENST00000568128.1:c.1569A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1344A>C
  hgvsp: ENST00000423133.2:c.1344A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.773A>C
  hgvsp: ENST00000562833.1:c.773A>C(p.%3D)
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.891A>C
  hgvsp: ENST00000398592.2:c.891A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2209T>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1359A>C
  hgvsp: ENST00000398591.2:c.1359A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1650A>C
  hgvsp: ENST00000563800.1:c.1650A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1584A>C
  hgvsp: ENST00000562019.1:c.1584A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*700A>C
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1377A>C
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1344A>C
  hgvsp: ENST00000450751.2:c.1344A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1578A>C
  hgvsp: ENST00000261723.6:c.1578A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6285
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4444
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2734
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg523Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

15-83215199-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215199
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215199
    reference: chr 15
allele count: 2
allele frequency: 1.657275439177991e-5
allele num: 120680
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1567C>A
  hgvsp: ENST00000568128.1:c.1567C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1357C>A
  hgvsp: ENST00000398591.2:c.1357C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1648C>A
  hgvsp: ENST00000563800.1:c.1648C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1342C>A
  hgvsp: ENST00000423133.2:c.1342C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1582C>A
  hgvsp: ENST00000562019.1:c.1582C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1375C>A
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1342C>A
  hgvsp: ENST00000568757.1:c.1342C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*698C>A
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.889C>A
  hgvsp: ENST00000398592.2:c.889C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1576C>A
  hgvsp: ENST00000261723.6:c.1576C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.771C>A
  hgvsp: ENST00000562833.1:c.771C>A(p.%3D)
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1342C>A
  hgvsp: ENST00000450751.2:c.1342C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1342C>A
  hgvsp: ENST00000564522.1:c.1342C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2207G>T
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6293
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13672
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2648
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7049
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg523Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/15-83215215-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215215
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215215
    reference: chr 15
allele count: 1
allele frequency: 8.284455048546906e-6
allele num: 120708
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.755T>G
  hgvsp: ENST00000562833.1:c.755T>G(p.%3D)
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.873T>G
  hgvsp: ENST00000398592.2:c.873T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*682T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1551T>G
  hgvsp: ENST00000568128.1:c.1551T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1341T>G
  hgvsp: ENST00000398591.2:c.1341T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1326T>G
  hgvsp: ENST00000568757.1:c.1326T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1566T>G
  hgvsp: ENST00000562019.1:c.1566T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1326T>G
  hgvsp: ENST00000423133.2:c.1326T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1560T>G
  hgvsp: ENST00000261723.6:c.1560T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2191A>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1359T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1326T>G
  hgvsp: ENST00000450751.2:c.1326T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1326T>G
  hgvsp: ENST00000564522.1:c.1326T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1632T>G
  hgvsp: ENST00000563800.1:c.1632T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2734
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro517Pro
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
reference allele: A
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

15-83215225-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215225
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215225
    reference: chr 15
allele count: 1
allele frequency: 8.283768783445716e-6
allele num: 120718
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1556G>C
  hgvsp: ENSP00000457836.1:p.Ser519Thr
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1316G>C
  hgvsp: ENSP00000458081.1:p.Ser439Thr
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1316G>C
  hgvsp: ENSP00000397526.2:p.Ser439Thr
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*672G>C
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2181C>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1550G>C
  hgvsp: ENSP00000261723.6:p.Ser517Thr
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1316G>C
  hgvsp: ENSP00000457364.1:p.Ser439Thr
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1541G>C
  hgvsp: ENSP00000457881.1:p.Ser514Thr
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1331G>C
  hgvsp: ENSP00000381591.2:p.Ser444Thr
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1349G>C
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1622G>C
  hgvsp: ENSP00000457556.1:p.Ser541Thr
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.745G>C
  hgvsp: ENSP00000454786.1:p.Ser249Thr
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1316G>C
  hgvsp: ENSP00000414187.2:p.Ser439Thr
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.863G>C
  hgvsp: ENSP00000381592.2:p.Ser288Thr
  variant of: http://identifiers.org/hgnc/21744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13672
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7090
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2321
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser514Thr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

15-83215225-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215225
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215225
    reference: chr 15
allele count: 5
allele frequency: 4.141884391722858e-5
allele num: 120718
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1316G>A
  hgvsp: ENSP00000458081.1:p.Ser439Asn
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*672G>A
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1316G>A
  hgvsp: ENSP00000457364.1:p.Ser439Asn
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1541G>A
  hgvsp: ENSP00000457881.1:p.Ser514Asn
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1550G>A
  hgvsp: ENSP00000261723.6:p.Ser517Asn
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1316G>A
  hgvsp: ENSP00000397526.2:p.Ser439Asn
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1622G>A
  hgvsp: ENSP00000457556.1:p.Ser541Asn
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.863G>A
  hgvsp: ENSP00000381592.2:p.Ser288Asn
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1331G>A
  hgvsp: ENSP00000381591.2:p.Ser444Asn
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2181C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1349G>A
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.745G>A
  hgvsp: ENSP00000454786.1:p.Ser249Asn
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1556G>A
  hgvsp: ENSP00000457836.1:p.Ser519Asn
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1316G>A
  hgvsp: ENSP00000414187.2:p.Ser439Asn
  variant of: http://identifiers.org/hgnc/21744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2321
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7090
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6310
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser514Asn
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/15-83215233-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215233
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215233
    reference: chr 15
allele count: 1
allele frequency: 8.28363154406892e-6
allele num: 120720
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1548T>G
  hgvsp: ENSP00000457836.1:p.His516Gln
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1308T>G
  hgvsp: ENSP00000458081.1:p.His436Gln
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1341T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1308T>G
  hgvsp: ENSP00000457364.1:p.His436Gln
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.737T>G
  hgvsp: ENSP00000454786.1:p.His246Gln
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2173A>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.855T>G
  hgvsp: ENSP00000381592.2:p.His285Gln
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*664T>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1308T>G
  hgvsp: ENSP00000397526.2:p.His436Gln
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1533T>G
  hgvsp: ENSP00000457881.1:p.His511Gln
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1323T>G
  hgvsp: ENSP00000381591.2:p.His441Gln
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1542T>G
  hgvsp: ENSP00000261723.6:p.His514Gln
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1308T>G
  hgvsp: ENSP00000414187.2:p.His436Gln
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1614T>G
  hgvsp: ENSP00000457556.1:p.His538Gln
  variant of: http://identifiers.org/hgnc/21744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13671
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7093
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4427
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His511Gln
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

15-83215241-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215241
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215241
    reference: chr 15
allele count: 1
allele frequency: 8.283906027370025e-6
allele num: 120716
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1606C>T
  hgvsp: ENST00000563800.1:c.1606C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.847C>T
  hgvsp: ENST00000398592.2:c.847C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.729C>T
  hgvsp: ENST00000562833.1:c.729C>T(p.%3D)
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1300C>T
  hgvsp: ENST00000568757.1:c.1300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1525C>T
  hgvsp: ENST00000568128.1:c.1525C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2165G>A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*656C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1534C>T
  hgvsp: ENST00000261723.6:c.1534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1300C>T
  hgvsp: ENST00000423133.2:c.1300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1333C>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1300C>T
  hgvsp: ENST00000450751.2:c.1300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1540C>T
  hgvsp: ENST00000562019.1:c.1540C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1315C>T
  hgvsp: ENST00000398591.2:c.1315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1300C>T
  hgvsp: ENST00000564522.1:c.1300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13671
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4408
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu509Leu
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff

15-83215251-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215251
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215251
    reference: chr 15
allele count: 48165
allele frequency: 3.991464324189939e-1
allele num: 120670
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1290A>G
  hgvsp: ENST00000423133.2:c.1290A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1290A>G
  hgvsp: ENST00000564522.1:c.1290A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1305A>G
  hgvsp: ENST00000398591.2:c.1305A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2155T>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1290A>G
  hgvsp: ENST00000450751.2:c.1290A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1530A>G
  hgvsp: ENST00000562019.1:c.1530A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1323A>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1515A>G
  hgvsp: ENST00000568128.1:c.1515A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.719A>G
  hgvsp: ENST00000562833.1:c.719A>G(p.%3D)
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1524A>G
  hgvsp: ENST00000261723.6:c.1524A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1290A>G
  hgvsp: ENST00000568757.1:c.1290A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*646A>G
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1596A>G
  hgvsp: ENST00000563800.1:c.1596A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.837A>G
  hgvsp: ENST00000398592.2:c.837A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 6.75e1
  variant carriers: 1559
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 6.25e1
  variant carriers: 1280
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 4.25e1
  variant carriers: 541
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 5.75e1
  variant carriers: 1017
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 2.25e1
  variant carriers: 99
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 3.75e1
  variant carriers: 383
genotype depth: GenotypeDepth
  all individuals: 20453
  bin: 9.75e1
  variant carriers: 20219
genotype depth: GenotypeDepth
  all individuals: 2382
  bin: 8.25e1
  variant carriers: 2295
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 9.25e1
  variant carriers: 2397
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 3.25e1
  variant carriers: 270
genotype depth: GenotypeDepth
  all individuals: 2522
  bin: 8.75e1
  variant carriers: 2451
genotype quality: GenotypeQuality
hgvs: p.Leu505Leu
num of homozygotes: 9763
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: T
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

15-83215257-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215257
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215257
    reference: chr 15
allele count: 13
allele frequency: 1.077246888413795e-4
allele num: 120678
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1284C>A
  hgvsp: ENST00000564522.1:c.1284C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1590C>A
  hgvsp: ENST00000563800.1:c.1590C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1284C>A
  hgvsp: ENST00000568757.1:c.1284C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.713C>A
  hgvsp: ENST00000562833.1:c.713C>A(p.%3D)
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1284C>A
  hgvsp: ENST00000450751.2:c.1284C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1299C>A
  hgvsp: ENST00000398591.2:c.1299C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*640C>A
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2149G>T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1509C>A
  hgvsp: ENST00000568128.1:c.1509C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1284C>A
  hgvsp: ENST00000423133.2:c.1284C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1518C>A
  hgvsp: ENST00000261723.6:c.1518C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.831C>A
  hgvsp: ENST00000398592.2:c.831C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1524C>A
  hgvsp: ENST00000562019.1:c.1524C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1317C>A
  variant of: http://identifiers.org/hgnc/21744
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5637
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14864
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Pro503Pro
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/15-83215266-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215266
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215266
    reference: chr 15
allele count: 1
allele frequency: 8.289949265510494e-6
allele num: 120628
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1275G>T
  hgvsp: ENSP00000457364.1:p.Gln425His
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1515G>T
  hgvsp: ENSP00000457836.1:p.Gln505His
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1581G>T
  hgvsp: ENSP00000457556.1:p.Gln527His
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1275G>T
  hgvsp: ENSP00000397526.2:p.Gln425His
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1275G>T
  hgvsp: ENSP00000458081.1:p.Gln425His
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1509G>T
  hgvsp: ENSP00000261723.6:p.Gln503His
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1290G>T
  hgvsp: ENSP00000381591.2:p.Gln430His
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1500G>T
  hgvsp: ENSP00000457881.1:p.Gln500His
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1275G>T
  hgvsp: ENSP00000414187.2:p.Gln425His
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.704G>T
  hgvsp: ENSP00000454786.1:p.Gln235His
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1308G>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2140C>A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*631G>T
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.822G>T
  hgvsp: ENSP00000381592.2:p.Gln274His
  variant of: http://identifiers.org/hgnc/21744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3511
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14854
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln500His
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

15-83215271-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 83215271
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 83215271
    reference: chr 15
allele count: 2
allele frequency: 1.658237293756736e-5
allele num: 120610
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000414187
  ensembl transcript: ENST00000450751
  gene symbol: CPEB1
  hgvsc: ENST00000450751.2:c.1270G>A
  hgvsp: ENSP00000414187.2:p.Val424Ile
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457881
  ensembl transcript: ENST00000568128
  gene symbol: CPEB1
  hgvsc: ENST00000568128.1:c.1495G>A
  hgvsp: ENSP00000457881.1:p.Val499Ile
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457364
  ensembl transcript: ENST00000564522
  gene symbol: CPEB1
  hgvsc: ENST00000564522.1:c.1270G>A
  hgvsp: ENSP00000457364.1:p.Val424Ile
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457556
  ensembl transcript: ENST00000563800
  gene symbol: CPEB1
  hgvsc: ENST00000563800.1:c.1576G>A
  hgvsp: ENSP00000457556.1:p.Val526Ile
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381591
  ensembl transcript: ENST00000398591
  gene symbol: CPEB1
  hgvsc: ENST00000398591.2:c.1285G>A
  hgvsp: ENSP00000381591.2:p.Val429Ile
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000381592
  ensembl transcript: ENST00000398592
  gene symbol: CPEB1
  hgvsc: ENST00000398592.2:c.817G>A
  hgvsp: ENSP00000381592.2:p.Val273Ile
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000458081
  ensembl transcript: ENST00000568757
  gene symbol: CPEB1
  hgvsc: ENST00000568757.1:c.1270G>A
  hgvsp: ENSP00000458081.1:p.Val424Ile
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000260836
  ensembl protein: ENSP00000454786
  ensembl transcript: ENST00000562833
  gene symbol: RP11-152F13.10
  hgvsc: ENST00000562833.1:c.699G>A
  hgvsp: ENSP00000454786.1:p.Val234Ile
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000397526
  ensembl transcript: ENST00000423133
  gene symbol: CPEB1
  hgvsc: ENST00000423133.2:c.1270G>A
  hgvsp: ENSP00000397526.2:p.Val424Ile
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000454881
  ensembl transcript: ENST00000570229
  gene symbol: CPEB1
  hgvsc: ENST00000570229.1:c.*626G>A
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261086
  ensembl protein: ENSP00000455775
  ensembl transcript: ENST00000568285
  gene symbol: RP11-379H8.1
  hgvsc: ENST00000568285.1:c.38-2135C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214575
  ensembl transcript: ENST00000569015
  gene symbol: CPEB1
  hgvsc: ENST00000569015.1:n.1303G>A
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000261723
  ensembl transcript: ENST00000261723
  gene symbol: CPEB1
  hgvsc: ENST00000261723.6:c.1504G>A
  hgvsp: ENSP00000261723.6:p.Val502Ile
  variant of: http://identifiers.org/hgnc/21744
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000214575
  ensembl protein: ENSP00000457836
  ensembl transcript: ENST00000562019
  gene symbol: CPEB1
  hgvsc: ENST00000562019.1:c.1510G>A
  hgvsp: ENSP00000457836.1:p.Val504Ile
  variant of: http://identifiers.org/hgnc/21744
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Val234Ile
num of homozygotes: 0
reference allele: C

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.82e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.7e2

QD
type: SiteQuality
SIO_000300: 1.795e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

MQ
type: SiteQuality
SIO_000300: 2.2e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

VQSLOD
type: SiteQuality
SIO_000300: 7.83e0

South Asian
type: Population
allele count: 10
allele frequency: 2.170138888888889e-3
allele num: 4608
num of homozygotes: 5

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2038
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.99e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.66e-2

DP
type: SiteQuality
SIO_000300: 1.27518e5

QD
type: SiteQuality
SIO_000300: 2.94e1

MQ
type: SiteQuality
SIO_000300: 3.573e1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4692
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 110
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.64e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.66194e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.55e-2

VQSLOD
type: SiteQuality
SIO_000300: -7.897e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.369e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.381e0

MQRankSum
type: SiteQuality
SIO_000300: 3.96e0

MQ
type: SiteQuality
SIO_000300: 2.342e1

QD
type: SiteQuality
SIO_000300: 2.336e1

African
type: Population
allele count: 100
allele frequency: 2.747252747252747e-1
allele num: 364
num of homozygotes: 40

East Asian
type: Population
allele count: 12
allele frequency: 4.918032786885246e-2
allele num: 244
num of homozygotes: 4

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 912
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 83
allele frequency: 3.160700685453161e-2
allele num: 2626
num of homozygotes: 29

South Asian
type: Population
allele count: 9
allele frequency: 1.919795221843003e-3
allele num: 4688
num of homozygotes: 3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.99e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.95e0

MQ
type: SiteQuality
SIO_000300: 2.34e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.18e-2

VQSLOD
type: SiteQuality
SIO_000300: -7.116e0

FS
type: SiteQuality
SIO_000300: 1.3732e1

QD
type: SiteQuality
SIO_000300: 9.970000000000001e0

DP
type: SiteQuality
SIO_000300: 1.7276e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.68e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.30457e5

VQSLOD
type: SiteQuality
SIO_000300: -2.069e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.400000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.49e-2

QD
type: SiteQuality
SIO_000300: 1.615e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.71e0

MQRankSum
type: SiteQuality
SIO_000300: 4.37e0

FS
type: SiteQuality
SIO_000300: 4.4419e1

MQ
type: SiteQuality
SIO_000300: 2.488e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.24e0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 172
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 108
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 144
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1140
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.25017e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.51e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.911e1

FS
type: SiteQuality
SIO_000300: 4.4313e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.346e0

MQ
type: SiteQuality
SIO_000300: 2.486e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.25e0

MQRankSum
type: SiteQuality
SIO_000300: 4.16e0

QD
type: SiteQuality
SIO_000300: 1.648e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.95e0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 160
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

Latino
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allele frequency: 1.19047619047619e-2
allele num: 84
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 70
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 108
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DP
type: SiteQuality
SIO_000300: 3.0527e4

QD
type: SiteQuality
SIO_000300: 1.361e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.56e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.37e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.615e0

MQ
type: SiteQuality
SIO_000300: 2.217e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.099999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.56e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.01e-1

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
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Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

QD
type: SiteQuality
SIO_000300: 1.816e1

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

MQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.129e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.567e3

MQ
type: SiteQuality
SIO_000300: 2.997e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
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Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
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QD
type: SiteQuality
SIO_000300: 8.210000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -2.238e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

DP
type: SiteQuality
SIO_000300: 9.348e3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

MQ
type: SiteQuality
SIO_000300: 2.874e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.91e-2

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
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MQ
type: SiteQuality
SIO_000300: 2.991e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.119999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.095e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.174e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 3.49e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.0958e4

MQRankSum
type: SiteQuality
SIO_000300: 2.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.99e-1

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.34e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.5905e4

MQ
type: SiteQuality
SIO_000300: 2.837e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.359e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.67e-1

European (Finnish)
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allele count: 9
allele frequency: 2.045454545454546e-1
allele num: 44
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 5.0e-1
allele num: 8
num of homozygotes: 0

African
type: Population
allele count: 14
allele frequency: 4.117647058823529e-1
allele num: 34
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 2.446808510638298e-1
allele num: 94
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.666666666666667e-1
allele num: 6
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.61e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 2.9e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.74e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 2.852e4

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 3.571428571428571e-2
allele num: 84
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.5267e4

VQSLOD
type: SiteQuality
SIO_000300: -3.521e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.307e0

MQ
type: SiteQuality
SIO_000300: 2.825e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.069999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

QD
type: SiteQuality
SIO_000300: 4.14e0

European (Finnish)
type: Population
allele count: 3
allele frequency: 2.830188679245283e-2
allele num: 106
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 7.142857142857142e-2
allele num: 14
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.666666666666667e-2
allele num: 240
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.612903225806452e-2
allele num: 62
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.8493e4

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.301e0

MQ
type: SiteQuality
SIO_000300: 2.858e1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

QD
type: SiteQuality
SIO_000300: 6.74e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.58e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 230
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
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African
type: Population
allele count: 8
allele frequency: 5.797101449275362e-2
allele num: 138
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.45e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.219e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.27e-1

QD
type: SiteQuality
SIO_000300: 5.78e0

DP
type: SiteQuality
SIO_000300: 6.7792e4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.309999999999999e-2

MQ
type: SiteQuality
SIO_000300: 2.441e1

VQSLOD
type: SiteQuality
SIO_000300: -4.806e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 144
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 3.125e-3
allele num: 320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 684
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 24
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 2.661e1

DP
type: SiteQuality
SIO_000300: 7.2532e4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.47e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.898e0

QD
type: SiteQuality
SIO_000300: 4.43e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

South Asian
type: Population
allele count: 4
allele frequency: 7.142857142857143e-3
allele num: 560
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 9.523809523809523e-2
allele num: 42
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.226415094339623e-2
allele num: 1060
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.989999999999999e-2

MQ
type: SiteQuality
SIO_000300: 2.791e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 8.8275e4

VQSLOD
type: SiteQuality
SIO_000300: -3.784e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e0

FS
type: SiteQuality
SIO_000300: 8.952999999999999e0

QD
type: SiteQuality
SIO_000300: 3.25e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.87757909215956e-4
allele num: 1454
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 140
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1156
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.23e-1

DP
type: SiteQuality
SIO_000300: 1.08185e5

MQ
type: SiteQuality
SIO_000300: 2.405e1

FS
type: SiteQuality
SIO_000300: 5.7895e1

MQRankSum
type: SiteQuality
SIO_000300: -1.907e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.78e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.054e1

QD
type: SiteQuality
SIO_000300: 9.710000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.38e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.82e-1

European (Non-Finnish)
type: Population
allele count: 853
allele frequency: 3.728146853146853e-1
allele num: 2288
num of homozygotes: 110

East Asian
type: Population
allele count: 61
allele frequency: 2.32824427480916e-1
allele num: 262
num of homozygotes: 4

South Asian
type: Population
allele count: 464
allele frequency: 1.480536056158264e-1
allele num: 3134
num of homozygotes: 7

Latino
type: Population
allele count: 46
allele frequency: 2.613636363636364e-1
allele num: 176
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 741
allele frequency: 6.477272727272727e-1
allele num: 1144
num of homozygotes: 179

VQSLOD
type: SiteQuality
SIO_000300: -1.069e2

MQ
type: SiteQuality
SIO_000300: 2.728e1

QD
type: SiteQuality
SIO_000300: 1.126e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

FS
type: SiteQuality
SIO_000300: 1.55266e2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.004e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.68e-1

DP
type: SiteQuality
SIO_000300: 2.29722e5

MQRankSum
type: SiteQuality
SIO_000300: 1.75e0

Other
type: Population
allele count: 1
allele frequency: 7.8125e-3
allele num: 128
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 420
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 224
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 5.39568345323741e-3
allele num: 1112
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.894e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.8e-2

MQ
type: SiteQuality
SIO_000300: 2.786e1

FS
type: SiteQuality
SIO_000300: 1.0492e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.9e-2

QD
type: SiteQuality
SIO_000300: 3.26e0

MQRankSum
type: SiteQuality
SIO_000300: 7.61e-1

DP
type: SiteQuality
SIO_000300: 2.10382e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

East Asian
type: Population
allele count: 2
allele frequency: 5.617977528089887e-3
allele num: 356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 126
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 4.926108374384237e-3
allele num: 406
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 1.103752759381898e-3
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 22
allele frequency: 7.323568575233023e-3
allele num: 3004
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -7.854e0

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.95e-1

DP
type: SiteQuality
SIO_000300: 2.11483e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.279999999999999e-2

FS
type: SiteQuality
SIO_000300: 2.7234e1

QD
type: SiteQuality
SIO_000300: 4.56e0

MQ
type: SiteQuality
SIO_000300: 2.769e1

African
type: Population
allele count: 5
allele frequency: 1.146788990825688e-2
allele num: 436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3148
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 4.310344827586207e-3
allele num: 232
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1106
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 2.21e1

FS
type: SiteQuality
SIO_000300: 7.895e1

VQSLOD
type: SiteQuality
SIO_000300: -3.462e1

QD
type: SiteQuality
SIO_000300: 1.058e1

DP
type: SiteQuality
SIO_000300: 2.09784e5

MQRankSum
type: SiteQuality
SIO_000300: -1.034e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.881e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1094
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 8.620689655172414e-3
allele num: 232
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3140
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.22e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.209e1

MQ
type: SiteQuality
SIO_000300: 2.42e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

FS
type: SiteQuality
SIO_000300: 3.8084e1

DP
type: SiteQuality
SIO_000300: 2.09351e5

QD
type: SiteQuality
SIO_000300: 1.346e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 126
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 6.485084306095979e-4
allele num: 4626
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3184
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.5e-1

QD
type: SiteQuality
SIO_000300: 5.07e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.29e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.017e0

MQ
type: SiteQuality
SIO_000300: 2.835e1

FS
type: SiteQuality
SIO_000300: 9.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

DP
type: SiteQuality
SIO_000300: 2.11573e5

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 126
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1070
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3184
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.29e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

VQSLOD
type: SiteQuality
SIO_000300: -4.017e0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.5e-1

QD
type: SiteQuality
SIO_000300: 5.07e0

MQ
type: SiteQuality
SIO_000300: 2.835e1

DP
type: SiteQuality
SIO_000300: 2.11573e5

European (Non-Finnish)
type: Population
allele count: 452
allele frequency: 1.56401384083045e-1
allele num: 2890
num of homozygotes: 1

Latino
type: Population
allele count: 51
allele frequency: 2.217391304347826e-1
allele num: 230
num of homozygotes: 0

South Asian
type: Population
allele count: 61
allele frequency: 1.456542502387775e-2
allele num: 4188
num of homozygotes: 0

Other
type: Population
allele count: 11
allele frequency: 1.1e-1
allele num: 100
num of homozygotes: 0

East Asian
type: Population
allele count: 27
allele frequency: 9.246575342465753e-2
allele num: 292
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.025e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

FS
type: SiteQuality
SIO_000300: 7.256e0

VQSLOD
type: SiteQuality
SIO_000300: -3.7e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.006e-1

QD
type: SiteQuality
SIO_000300: 4.35e0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.43e-1

DP
type: SiteQuality
SIO_000300: 2.36929e5

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 672
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 444
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.025931928687196e-4
allele num: 4936
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 144
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.94e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.247e0

MQ
type: SiteQuality
SIO_000300: 3.237e1

DP
type: SiteQuality
SIO_000300: 2.72525e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.11e-1

FS
type: SiteQuality
SIO_000300: 7.375e0

QD
type: SiteQuality
SIO_000300: 9.81e0

European (Finnish)
type: Population
allele count: 5
allele frequency: 4.826254826254826e-3
allele num: 1036
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.739336492890995e-4
allele num: 4220
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 298
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.82093e5

FS
type: SiteQuality
SIO_000300: 4.9829e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.055e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.79e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.62e-1

MQ
type: SiteQuality
SIO_000300: 3.214e1

VQSLOD
type: SiteQuality
SIO_000300: -1.367e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.580000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.0e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5118
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.972386587771203e-4
allele num: 5070
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.78424e5

MQ
type: SiteQuality
SIO_000300: 3.614e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

QD
type: SiteQuality
SIO_000300: 1.628e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.79e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.03e0

MQRankSum
type: SiteQuality
SIO_000300: -7.13e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.443e-1

FS
type: SiteQuality
SIO_000300: 3.798e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.179e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 150
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 30
allele frequency: 6.244796003330558e-3
allele num: 4804
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 1.796138302649304e-3
allele num: 4454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 3.364737550471063e-3
allele num: 1486
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.205e1

FS
type: SiteQuality
SIO_000300: 2.798e0

VQSLOD
type: SiteQuality
SIO_000300: -3.837e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.17e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

QD
type: SiteQuality
SIO_000300: 2.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.5e-1

DP
type: SiteQuality
SIO_000300: 2.8226e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1402
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.450980392156863e-3
allele num: 408
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 152
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.29e-1

FS
type: SiteQuality
SIO_000300: 2.608e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.918e0

DP
type: SiteQuality
SIO_000300: 2.82752e5

MQ
type: SiteQuality
SIO_000300: 3.267e1

MQRankSum
type: SiteQuality
SIO_000300: 7.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-2

QD
type: SiteQuality
SIO_000300: 4.48e0

South Asian
type: Population
allele count: 6
allele frequency: 2.487562189054726e-3
allele num: 2412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.392757660167131e-3
allele num: 718
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-1

QD
type: SiteQuality
SIO_000300: 3.21e0

FS
type: SiteQuality
SIO_000300: 8.77e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

MQ
type: SiteQuality
SIO_000300: 3.21e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.964e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.231e0

DP
type: SiteQuality
SIO_000300: 3.14478e5

East Asian
type: Population
allele count: 1
allele frequency: 3.676470588235294e-3
allele num: 272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 40
allele frequency: 5.571030640668524e-2
allele num: 718
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.127659574468085e-2
allele num: 94
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.243781094527363e-3
allele num: 2412
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.231e0

DP
type: SiteQuality
SIO_000300: 3.14478e5

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

QD
type: SiteQuality
SIO_000300: 3.21e0

MQRankSum
type: SiteQuality
SIO_000300: 3.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.964e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

FS
type: SiteQuality
SIO_000300: 8.77e-1

MQ
type: SiteQuality
SIO_000300: 3.21e1

East Asian
type: Population
allele count: 59
allele frequency: 2.169117647058824e-1
allele num: 272
num of homozygotes: 0

South Asian
type: Population
allele count: 943
allele frequency: 3.909618573797679e-1
allele num: 2412
num of homozygotes: 0

Other
type: Population
allele count: 29
allele frequency: 3.085106382978723e-1
allele num: 94
num of homozygotes: 0

African
type: Population
allele count: 154
allele frequency: 2.76978417266187e-1
allele num: 556
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.964e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.231e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.13e-1

MQ
type: SiteQuality
SIO_000300: 3.21e1

DP
type: SiteQuality
SIO_000300: 3.14478e5

BaseQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

FS
type: SiteQuality
SIO_000300: 8.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

QD
type: SiteQuality
SIO_000300: 3.21e0

East Asian
type: Population
allele count: 1
allele frequency: 3.676470588235294e-3
allele num: 272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 94
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 3.316749585406302e-3
allele num: 2412
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

QD
type: SiteQuality
SIO_000300: 3.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.964e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-1

DP
type: SiteQuality
SIO_000300: 3.14478e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.231e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

MQ
type: SiteQuality
SIO_000300: 3.21e1

MQRankSum
type: SiteQuality
SIO_000300: 3.13e-1

FS
type: SiteQuality
SIO_000300: 8.77e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1772
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 650
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.716e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.934e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.615e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.71e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

DP
type: SiteQuality
SIO_000300: 3.74208e5

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

African
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQ
type: SiteQuality
SIO_000300: 3.053e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.06e-2

QD
type: SiteQuality
SIO_000300: 1.606e1

VQSLOD
type: SiteQuality
SIO_000300: -4.317e0

DP
type: SiteQuality
SIO_000300: 1.75e2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.09e1

DP
type: SiteQuality
SIO_000300: 1.56e2

QD
type: SiteQuality
SIO_000300: 2.27e1

VQSLOD
type: SiteQuality
SIO_000300: -1.537e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.190000000000001e-2

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.33e-2

DP
type: SiteQuality
SIO_000300: 2.629e3

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 2.507e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQ
type: SiteQuality
SIO_000300: 3.4e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.98e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.362e0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.450000000000001e-2

QD
type: SiteQuality
SIO_000300: 8.52e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 2.0e1

VQSLOD
type: SiteQuality
SIO_000300: -5.613e0

DP
type: SiteQuality
SIO_000300: 8.047e3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.985e3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.423e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.740000000000001e-2

MQ
type: SiteQuality
SIO_000300: 2.5e1

VQSLOD
type: SiteQuality
SIO_000300: -4.091e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 478
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.066115702479339e-3
allele num: 484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4968
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.389e0

MQ
type: SiteQuality
SIO_000300: 2.728e1

QD
type: SiteQuality
SIO_000300: 7.21e0

MQRankSum
type: SiteQuality
SIO_000300: -1.002e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.48e-1

DP
type: SiteQuality
SIO_000300: 2.53771e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.73e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.416e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4992
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4218
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.15473441108545e-3
allele num: 866
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.213e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.77e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0

FS
type: SiteQuality
SIO_000300: 2.077e0

DP
type: SiteQuality
SIO_000300: 2.55376e5

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

QD
type: SiteQuality
SIO_000300: 8.59e0

MQ
type: SiteQuality
SIO_000300: 2.546e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.25e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 640
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1062
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.25e-4
allele num: 4800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 144
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.341e0

DP
type: SiteQuality
SIO_000300: 2.7175e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.32e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 2.928e1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.209e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 8.779999999999999e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 522
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5176
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 3.710575139146568e-3
allele num: 1078
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 144
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.73231e5

VQSLOD
type: SiteQuality
SIO_000300: -3.799e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.33e-1

FS
type: SiteQuality
SIO_000300: 6.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.58e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.12e-1

MQ
type: SiteQuality
SIO_000300: 2.863e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.03e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.026272577996716e-3
allele num: 4872
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1078
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 144
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 2.863e1

DP
type: SiteQuality
SIO_000300: 2.73231e5

QD
type: SiteQuality
SIO_000300: 7.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 6.17e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.33e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.799e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.58e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.12e-1

East Asian
type: Population
allele count: 1
allele frequency: 7.861635220125787e-4
allele num: 1272
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5328
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 990
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 152
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.41e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.934e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

MQ
type: SiteQuality
SIO_000300: 2.806e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.51e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.77976e5

BaseQRankSum
type: SiteQuality
SIO_000300: 7.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.51e-1

QD
type: SiteQuality
SIO_000300: 5.61e0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.215851602023609e-4
allele num: 4744
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 642
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1022
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4778
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.483e1

QD
type: SiteQuality
SIO_000300: 8.800000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.54e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.793e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.65e-1

DP
type: SiteQuality
SIO_000300: 2.09814e5

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 112
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 9.803921568627451e-4
allele num: 1020
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 160
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.958e0

QD
type: SiteQuality
SIO_000300: 6.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.12e-1

DP
type: SiteQuality
SIO_000300: 6.3702e4

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.84e-1

MQ
type: SiteQuality
SIO_000300: 3.188e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.63e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.002e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 80
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10
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European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.949852507374631e-3
allele num: 678
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.363e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.071e-1

DP
type: SiteQuality
SIO_000300: 5.7795e4

MQ
type: SiteQuality
SIO_000300: 3.104e1

VQSLOD
type: SiteQuality
SIO_000300: -1.74e0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.7e1

DP
type: SiteQuality
SIO_000300: 8.5e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.417e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.16e0

QD
type: SiteQuality
SIO_000300: 2.347e1

African
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
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allele count: 0
allele frequency: NaN
allele num: 0
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MQ
type: SiteQuality
SIO_000300: 3.496e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.961e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.973e-1

DP
type: SiteQuality
SIO_000300: 1.66e2

VQSLOD
type: SiteQuality
SIO_000300: 2.94e1

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.973e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.936e1

MQ
type: SiteQuality
SIO_000300: 3.496e1

FS
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SIO_000300: 0.0e0

DP
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SIO_000300: 1.68e2

QD
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SIO_000300: 2.961e1

GenotypeDepth
all individuals: 13951
bin: 9.75e1
variant carriers: 5

GenotypeDepth
all individuals: 2462
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 1091
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 766
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
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allele count: 6
allele frequency: 6.160164271047228e-4
allele num: 9740
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

MQRankSum
type: SiteQuality
SIO_000300: -1.683e0

FS
type: SiteQuality
SIO_000300: 6.98e-1

MQ
type: SiteQuality
SIO_000300: 5.547e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-1

QD
type: SiteQuality
SIO_000300: 1.92e1

DP
type: SiteQuality
SIO_000300: 4.025645e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

GenotypeDepth
all individuals: 1738
bin: 5.75e1
variant carriers: 15

GenotypeDepth
all individuals: 14706
bin: 9.75e1
variant carriers: 1512

GenotypeDepth
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bin: 9.25e1
variant carriers: 111

GenotypeDepth
all individuals: 1716
bin: 5.25e1
variant carriers: 25

GenotypeDepth
all individuals: 6388
bin: 2.75e1
variant carriers: 41

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 135
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1588
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 773
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 37831
bin: 9.75e1
variant carriers: 2189

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 17
allele frequency: 1.897321428571428e-2
allele num: 896
num of homozygotes: 1

Latino
type: Population
allele count: 126
allele frequency: 1.089399965415874e-2
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1694
allele frequency: 2.545760572270145e-2
allele num: 66542
num of homozygotes: 17

African
type: Population
allele count: 33
allele frequency: 3.388090349075975e-3
allele num: 9740
num of homozygotes: 0

South Asian
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allele frequency: 6.882689730783286e-3
allele num: 16418
num of homozygotes: 1

European (Finnish)
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allele count: 234
allele frequency: 3.537949803447233e-2
allele num: 6614
num of homozygotes: 5

InbreedingCoeff
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SIO_000300: 1.5e-3

ClippingRankSum
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DP
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FS
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BaseQRankSum
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MQ
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SIO_000300: 5.956e1

MQRankSum
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SIO_000300: 2.15e-1

VQSLOD
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QD
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ReadPosRankSum
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SIO_000300: 6.51e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9746
num of homozygotes: 0

Latino
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allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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ClippingRankSum
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SIO_000300: -2.57e-1

FS
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MQ
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QD
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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SIO_000300: -9.899e-1

InbreedingCoeff
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SIO_000300: 1.0e-3

DP
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MQRankSum
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SIO_000300: -2.101e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160631383472609e-4
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9754
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 8.0e-4

MQ
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SIO_000300: 5.915e1

ReadPosRankSum
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SIO_000300: 2.05e0

FS
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SIO_000300: 5.414e0

ClippingRankSum
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SIO_000300: -5.48e-1

MQRankSum
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BaseQRankSum
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VQSLOD
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QD
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SIO_000300: 1.208e1

DP
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SIO_000300: 3.994836e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e0

InbreedingCoeff
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SIO_000300: 1.0e-3

VQSLOD
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FS
type: SiteQuality
SIO_000300: 8.289999999999999e0

MQ
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SIO_000300: 5.921e1

MQRankSum
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DP
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SIO_000300: 3.996165e6

BaseQRankSum
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SIO_000300: -8.599999999999999e-2

ReadPosRankSum
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SIO_000300: 2.03e0

QD
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SIO_000300: 1.205e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
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num of homozygotes: 0

South Asian
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allele num: 16468
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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QD
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MQ
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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DP
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MQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66610
num of homozygotes: 0

African
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European (Finnish)
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num of homozygotes: 0

South Asian
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BaseQRankSum
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InbreedingCoeff
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DP
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MQRankSum
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MQ
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ReadPosRankSum
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FS
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VQSLOD
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ClippingRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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South Asian
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African
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Latino
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Other
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European (Non-Finnish)
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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MQ
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FS
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DP
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InbreedingCoeff
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MQRankSum
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VQSLOD
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 4

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 2
allele frequency: 2.047502047502048e-4
allele num: 9768
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 9.004412161959359e-5
allele num: 66634
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MQRankSum
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ReadPosRankSum
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QD
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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FS
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.06060606060606e-5
allele num: 16500
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66662
num of homozygotes: 0

Other
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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VQSLOD
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DP
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ClippingRankSum
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InbreedingCoeff
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MQ
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FS
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QD
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66664
num of homozygotes: 0

Latino
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num of homozygotes: 0

Other
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QD
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InbreedingCoeff
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VQSLOD
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MQRankSum
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FS
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ReadPosRankSum
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MQ
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ClippingRankSum
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BaseQRankSum
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
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num of homozygotes: 0

Other
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African
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South Asian
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Latino
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European (Finnish)
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allele num: 6614
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BaseQRankSum
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InbreedingCoeff
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DP
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ClippingRankSum
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MQ
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MQRankSum
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FS
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VQSLOD
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QD
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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European (Finnish)
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Latino
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South Asian
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East Asian
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Other
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FS
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DP
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MQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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QD
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BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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num of homozygotes: 0

South Asian
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European (Non-Finnish)
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Other
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Latino
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East Asian
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African
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QD
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FS
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BaseQRankSum
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ClippingRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.551e0

VQSLOD
type: SiteQuality
SIO_000300: 2.05e-1

MQRankSum
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SIO_000300: 1.2e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.53e-1

DP
type: SiteQuality
SIO_000300: 4.005882e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.69e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.32e-1

GenotypeDepth
all individuals: 1801
bin: 5.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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bin: 1.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
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variant carriers: 0

GenotypeQuality
all individuals: 36757
bin: 9.75e1
variant carriers: 5

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.028834504482675e-4
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.69e0

VQSLOD
type: SiteQuality
SIO_000300: 2.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.53e-1

FS
type: SiteQuality
SIO_000300: 2.551e0

DP
type: SiteQuality
SIO_000300: 4.005882e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.32e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

GenotypeDepth
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bin: 6.25e1
variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1801
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.33e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

MQRankSum
type: SiteQuality
SIO_000300: 2.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.31e-1

FS
type: SiteQuality
SIO_000300: 3.394e0

DP
type: SiteQuality
SIO_000300: 4.005719e6

VQSLOD
type: SiteQuality
SIO_000300: 6.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.047e0

QD
type: SiteQuality
SIO_000300: 1.276e1

GenotypeDepth
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2647
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2734
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2470
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variant carriers: 0

GenotypeDepth
all individuals: 2013
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 2358
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1802
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variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1199
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.546e0

QD
type: SiteQuality
SIO_000300: 1.407e1

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

DP
type: SiteQuality
SIO_000300: 4.005674e6

MQRankSum
type: SiteQuality
SIO_000300: 2.81e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 3.052e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

GenotypeDepth
all individuals: 2085
bin: 4.75e1
variant carriers: 669

GenotypeDepth
all individuals: 5502
bin: 2.75e1
variant carriers: 190

GenotypeDepth
all individuals: 20
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variant carriers: 3

GenotypeDepth
all individuals: 2298
bin: 7.75e1
variant carriers: 2158

GenotypeDepth
all individuals: 1784
bin: 5.25e1
variant carriers: 838

GenotypeDepth
all individuals: 28
bin: 2.5e0
variant carriers: 5

GenotypeDepth
all individuals: 2158
bin: 7.25e1
variant carriers: 1971

GenotypeDepth
all individuals: 48
bin: 1.25e1
variant carriers: 18

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 598
bin: 8.75e1
variant carriers: 16

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 12

GenotypeQuality
all individuals: 41
bin: 2.25e1
variant carriers: 3

GenotypeQuality
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bin: 6.25e1
variant carriers: 10

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 16

GenotypeQuality
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bin: 3.25e1
variant carriers: 2

GenotypeQuality
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variant carriers: 6

GenotypeQuality
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variant carriers: 45

GenotypeQuality
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bin: 8.25e1
variant carriers: 29

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 7

GenotypeQuality
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bin: 4.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 38238

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 7

GenotypeQuality
all individuals: 3595
bin: 6.75e1
variant carriers: 12

Latino
type: Population
allele count: 3717
allele frequency: 3.214285714285715e-1
allele num: 11564
num of homozygotes: 605

European (Non-Finnish)
type: Population
allele count: 24974
allele frequency: 3.744564728461331e-1
allele num: 66694
num of homozygotes: 4628

South Asian
type: Population
allele count: 7895
allele frequency: 4.783688802714494e-1
allele num: 16504
num of homozygotes: 1928

European (Finnish)
type: Population
allele count: 2894
allele frequency: 4.375566979135168e-1
allele num: 6614
num of homozygotes: 604

African
type: Population
allele count: 4193
allele frequency: 4.280318497345855e-1
allele num: 9796
num of homozygotes: 910

Other
type: Population
allele count: 383
allele frequency: 4.274553571428572e-1
allele num: 896
num of homozygotes: 92

East Asian
type: Population
allele count: 4109
allele frequency: 4.776796093931644e-1
allele num: 8602
num of homozygotes: 996

MQ
type: SiteQuality
SIO_000300: 5.955e1

DP
type: SiteQuality
SIO_000300: 4.740929e6

VQSLOD
type: SiteQuality
SIO_000300: 4.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.84e-1

FS
type: SiteQuality
SIO_000300: 6.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.29e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.56e0

QD
type: SiteQuality
SIO_000300: 2.095e1

GenotypeDepth
all individuals: 195
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 8544
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2592
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variant carriers: 1

GenotypeDepth
all individuals: 685
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variant carriers: 4

GenotypeDepth
all individuals: 1082
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variant carriers: 0

GenotypeDepth
all individuals: 125
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GenotypeDepth
all individuals: 15468
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variant carriers: 0

GenotypeDepth
all individuals: 791
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variant carriers: 0

GenotypeQuality
all individuals: 22
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 37
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 11199
bin: 9.75e1
variant carriers: 13

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 13
allele frequency: 1.123595505617978e-3
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.951e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

BaseQRankSum
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SIO_000300: -2.974e0

MQRankSum
type: SiteQuality
SIO_000300: 1.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e-1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.357e1

MQ
type: SiteQuality
SIO_000300: 5.96e1

DP
type: SiteQuality
SIO_000300: 2.260068e6

VQSLOD
type: SiteQuality
SIO_000300: 2.16e0

GenotypeDepth
all individuals: 1081
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
all individuals: 495
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GenotypeQuality
all individuals: 161
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GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 24
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GenotypeQuality
all individuals: 9979
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GenotypeQuality
all individuals: 26
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 50
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 21
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GenotypeQuality
all individuals: 3532
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11176
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5008254539997e-5
allele num: 66630
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.369e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

QD
type: SiteQuality
SIO_000300: 1.323e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.133e0

VQSLOD
type: SiteQuality
SIO_000300: -5.605e-1

FS
type: SiteQuality
SIO_000300: 1.1857e1

DP
type: SiteQuality
SIO_000300: 2.257252e6